Metagenome Family F091847

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091847
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	54 residues
Representative Sequence	MNNSNFWLTYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHANNDGDS
Number of Associated Samples	84
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	23.36 %
% of genes from short scaffolds (< 2000 bps)	19.63 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (86.916 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (43.925 % of family members)
Environment Ontology (ENVO)	Unclassified (94.393 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.54% β-sheet: 9.62% Coil/Unstructured: 53.85%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF10544	T5orf172	45.79
PF00583	Acetyltransf_1	14.95
PF13673	Acetyltransf_10	11.21
PF13508	Acetyltransf_7	2.80
PF00581	Rhodanese	1.87
PF13455	MUG113	1.87
PF00291	PALP	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
All Organisms	root	All Organisms	13.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
cellular organisms	root	All Organisms → cellular organisms	7.48 %
Viruses	superkingdom	All Organisms → Viruses	5.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.61 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.61 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.61 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.61 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	1.87 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.61 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1.87 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300006752\|Ga0098048_1028566	All Organisms → Viruses → Predicted Viral	1826	Open in IMG/M
3300007234\|Ga0075460_10201250	Not Available	677	Open in IMG/M
3300009433\|Ga0115545_1188910	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	705	Open in IMG/M
3300010368\|Ga0129324_10106820	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300017708\|Ga0181369_1087479	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300017721\|Ga0181373_1005460	All Organisms → Viruses → Predicted Viral	2436	Open in IMG/M
3300017726\|Ga0181381_1113213	Not Available	570	Open in IMG/M
3300017750\|Ga0181405_1015720	All Organisms → Viruses → Predicted Viral	2133	Open in IMG/M
3300017750\|Ga0181405_1105602	Not Available	708	Open in IMG/M
3300017756\|Ga0181382_1016433	Not Available	2392	Open in IMG/M
3300017764\|Ga0181385_1036338	Not Available	1550	Open in IMG/M
3300017769\|Ga0187221_1036014	Not Available	1645	Open in IMG/M
3300017773\|Ga0181386_1232964	Not Available	547	Open in IMG/M
3300017951\|Ga0181577_10515429	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300020403\|Ga0211532_10386348	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	525	Open in IMG/M
3300020414\|Ga0211523_10286186	Not Available	676	Open in IMG/M
3300020429\|Ga0211581_10306475	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	647	Open in IMG/M
3300020440\|Ga0211518_10565622	Not Available	505	Open in IMG/M
3300021425\|Ga0213866_10239106	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300022065\|Ga0212024_1045731	Not Available	763	Open in IMG/M
3300022068\|Ga0212021_1067896	Not Available	730	Open in IMG/M
3300025655\|Ga0208795_1026719	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300025818\|Ga0208542_1047389	All Organisms → Viruses → Predicted Viral	1347	Open in IMG/M
3300025828\|Ga0208547_1040911	All Organisms → Viruses → Predicted Viral	1672	Open in IMG/M
3300029319\|Ga0183748_1018378	All Organisms → Viruses → Predicted Viral	2552	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Strait	Environmental → Aquatic → Marine → Strait	43.93%
Coastal	Environmental → Aquatic → Marine → Coastal	24.30%
Oceanic	Environmental → Aquatic → Marine → Oceanic	14.95%
Unclassified	Environmental → Aquatic → Marine → Unclassified	9.35%
Pelagic	Environmental → Aquatic → Marine → Pelagic	6.54%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	43.93%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	24.30%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	14.02%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	9.35%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	6.54%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.93%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.93%

Habitat	Taxonomy	Distribution
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	43.93%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	20.56%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	14.02%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	8.41%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	3.74%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.80%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.87%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.93%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.93%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.93%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.93%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300005733	Seawater microbial communities from Vineyard Sound, MA, USA - crude oil ammended T14	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300007862	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_0.2um	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017721	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017726	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017729	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017732	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11	Environmental	Open in IMG/M
3300017733	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23	Environmental	Open in IMG/M
3300017735	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21	Environmental	Open in IMG/M
3300017737	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2)	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017739	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017746	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020169	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020414	Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)	Environmental	Open in IMG/M
3300020429	Marine microbial communities from Tara Oceans - TARA_B100000614 (ERX556134-ERR599032)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300020450	Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)	Environmental	Open in IMG/M
3300020451	Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020595	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300022065	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)	Environmental	Open in IMG/M
3300022068	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)	Environmental	Open in IMG/M
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025655	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025687	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025816	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025828	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025840	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25127J35165_10367884	3300002482	Marine	MDNSRFWLKYAPEGYFNLIELANTQRAITNFVKILTNKEIKVDFYSNNNIDSFTNGK
JGI25127J35165_10759711	3300002482	Marine	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHSNND
JGI25127J35165_11117391	3300002482	Marine	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHASNDSDSMT
Ga0076921_1039643	3300005733	Marine	MNNSNFWLTYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDF
Ga0075474_102214742	3300006025	Aqueous	MNSSNFWLKHEPEGKFNLLELANTQRAITNFVKILTE
Ga0075478_101963232	3300006026	Aqueous	MNSSNFWLKHEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHANND
Ga0075462_101764703	3300006027	Aqueous	MNNANFWLKYEPEGKFNLLELANTQRAITNFVKILTEREIKVD
Ga0098048_10285661	3300006752	Marine	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEREIKVD
Ga0070749_103530493	3300006802	Aqueous	MNNSNFWLIYEPEGKFNLLELANTQRAITNFVKILTE
Ga0075481_100920153	3300006868	Aqueous	MNNSNFWLTYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHANND
Ga0075475_101621803	3300006874	Aqueous	MNNSNFWLTYEPEGKFNLLELANTQRAITNFVKILTEKEIKV
Ga0070746_105402541	3300006919	Aqueous	MNNSNFWLTYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHANNDG
Ga0075460_102012501	3300007234	Aqueous	MNNSNFWLTYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHANNDGDSMTNGKRITISSTISMNTID
Ga0075463_102230023	3300007236	Aqueous	MNSSNFWLTHEPEGKFNLLELANTQRAITNFVKILTEREIKVDFHANND
Ga0105737_11983092	3300007862	Estuary Water	MSNSNFWLAHEPEGKFNLLELANTQRAITNFVKIL
Ga0115552_14280683	3300009077	Pelagic Marine	MNSSIFWLTYEPEGKFNLLELANTQRAITNFVKILTEREIKVDFHASNDSDSMTNGKRITLS
Ga0115545_11889103	3300009433	Pelagic Marine	MNSSIFWLTYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHANNDGDSMTNGERITISSTISMNT
Ga0115013_112273652	3300009550	Marine	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHASNDSDSMTNGKRI
Ga0129324_101068204	3300010368	Freshwater To Marine Saline Gradient	MNNANFWLKYEPEGKFNLLELANTQRASTNFVKILTEREIKVDFHANNDGDSMTNGKRITISSTISMNTIDSVV
Ga0160423_112126532	3300012920	Surface Seawater	MNNSNFWLSSDLKGTLNLLELANTQKAITNFVKILTNKEIPVKFYSDNDGDSMTDGKK
Ga0181369_10461773	3300017708	Marine	MNSSNFWLKHEPEGKFNLLELANTQRAITNFVKILTEREIKV
Ga0181369_10467464	3300017708	Marine	MNSSNFWLTHEPEGKFNLLELANTQRAITNFVKILTEREIKVDFHANNDGD
Ga0181369_10874792	3300017708	Marine	MNNSNFWLKYKPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHASNDSDSMTNGKRITLSSTISMNTIDSVV
Ga0181387_10067867	3300017709	Seawater	MNSSNFWLTYEPEGKFNLLELANTQRAITNFVKILTE
Ga0181387_10827123	3300017709	Seawater	MNNSKFWLKYVPEGQFNLIELANTQQAITNFVKILTNQEIKVDFYANNR
Ga0181403_10103054	3300017710	Seawater	MNSSNFWLKHEPEGKFNLLELANTQRAITNFVKILTEREIKVDFHANNDGDSMT
Ga0181403_10806141	3300017710	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHASNDSDSMTNGKRITLSST
Ga0181391_10799641	3300017713	Seawater	MNNSNFWLKYKPEGKFNLLELANTQRAITNFVKILTEREIKVD
Ga0181404_11803812	3300017717	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHASNDSDSMTNGKRIT
Ga0181390_10522601	3300017719	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHASNDSDSMTNGK
Ga0181373_10054607	3300017721	Marine	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEREIKVDFQSNNDADSFTNGKRITISSTITMNTID
Ga0181373_10331534	3300017721	Marine	MNSSNFWLTHEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHASNDSDS
Ga0181373_10332461	3300017721	Marine	MNNSNFWLKYKPEGKFNLLELANTQRAITNFVKILTEKEIKVD
Ga0181398_10165206	3300017725	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKIL
Ga0181398_10815861	3300017725	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFH
Ga0181381_11132131	3300017726	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEREIKVDFQSNNDADSFTNGKRITISSTI
Ga0181401_10262197	3300017727	Seawater	MNNSNFWLTHEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHA
Ga0181396_10975742	3300017729	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDF
Ga0181416_10773323	3300017731	Seawater	MNNSNFWLKYKPEGKFNLLELANTQRAITNFVKILTEREIKVDFHANNDSDSM
Ga0181415_11120972	3300017732	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFQSNNDADSFTNGKR
Ga0181426_10786211	3300017733	Seawater	MNNSNFWLTYEPEGKFNLLELANTQRAITNFVKILIEKEIKVDFHANNDGDSMTNGERI
Ga0181431_10227745	3300017735	Seawater	MNNSNFWLKYKPEGKFNLLELANTQRAITNFVKILTEKEIKVAFQSNNDA
Ga0187218_10328481	3300017737	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFYASNDSDSMTNGKRI
Ga0181428_11491203	3300017738	Seawater	MNSSNFWLTHEPEGKFNLLELANTQRAITNFVKILTEREIKVDFHANNDGDSMT
Ga0181428_11591142	3300017738	Seawater	MNNSNFWLTYEPEGKFNLLELANTQRAITNFVKILIEKEIKVDFHANNDGDSMTNGERITIS
Ga0181433_10074178	3300017739	Seawater	MNNSNFWLNSDIKGTLNLLELANTQKAITNFVKILTDKE
Ga0181433_10098711	3300017739	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEREIKVDFQSNNDAD
Ga0181433_10472683	3300017739	Seawater	MNNSNFWLKYEPEGKFNLLELANTQHAITNFVKILTEREIKVDFQSNNDADSFTNGKRIT
Ga0181433_11260722	3300017739	Seawater	MDNSKFWLKYTPEGYFNLIELANTQRAITNFVKILTNKEIKVDFYSNNKIDSYTNGKQITISSTISM
Ga0181418_10734131	3300017740	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEREIKVDFHANNDGDSMTNGKRI
Ga0181389_11468752	3300017746	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHASN
Ga0181393_10273971	3300017748	Seawater	MNNSNFWLTYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHAHNDGDSMTNGERITIS
Ga0181392_11601592	3300017749	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFYASNDSDSMTNGKRITLSSTI
Ga0181405_10157206	3300017750	Seawater	MNNSNFWLAHEPEGKFNLLELANTQRAITNFVKILTEREIKVDFHANNDGDSMTNGKRITISSTISMN
Ga0181405_11056023	3300017750	Seawater	MNNSKFWLKYVPEGQFNLIELANTQQAITNFVKILTNQEIKVDFYANNRSDSMTDGKRITISSKISMN
Ga0181405_11197041	3300017750	Seawater	MDNSKFWLKYTPDGYFNLIELANTQCAITNFVKILTKKEIKVDFYSTNKQDSFTNGKEIT
Ga0181400_10896611	3300017752	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHA
Ga0181400_11595591	3300017752	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHASNDSD
Ga0181382_10164338	3300017756	Seawater	MNNSNFWLKYKPEGKFNLLELANTQRAITNFVKILIEKEIKVAFQSNNDADSFTNGKRITISST
Ga0181409_11435681	3300017758	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHASNDSDSM
Ga0181414_11549913	3300017759	Seawater	MNNSKFWLKYVPEGQFNLIELANTQQAITNFVKILTSKEIKVDFYANNNSDSMTNGKRITISS
Ga0181385_10363385	3300017764	Seawater	MNNSNFWLTYEPEGKFNLLELANTQRAITNFVKILIEKEIKV
Ga0181413_11303481	3300017765	Seawater	MNNSNFWLKYKPEGKFNLLELANTQRAITNFVKILTEREIK
Ga0181406_10801794	3300017767	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFQSNNDADSFTNGKRITISST
Ga0187220_10135841	3300017768	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVD
Ga0187221_10360141	3300017769	Seawater	MNNSNFWLTYEPEGKFNLLELANTQRAITNFVKILTEREIKVDFQSNNDADSFTNGKRITISSTITMN
Ga0181425_10356234	3300017771	Seawater	MNNSIFWLKYEPEGKFNLLELANTQRAITNFVKILTEREIKVDFQSNNDA
Ga0181425_11401853	3300017771	Seawater	MNNSNFWLKYKPEGKFNLLELANTQRAITNFVKILTEKEIKVDFQSNNDADSFTNGKRIT
Ga0181430_10269527	3300017772	Seawater	MNNSNFWLKYKPEGKFNLLELANTQRAITNFVKILTEREIKVDFQSNND
Ga0181386_12329641	3300017773	Seawater	MNNSNFWLKYEPKGKFNLLELANTQRAITNFVKILTEKEIKVDFQSNNDADSFTNGKRITISSTITMNTIDS
Ga0181380_10963774	3300017782	Seawater	MNNSNFWLKYKPEGKFNLLELANTQRAITNFVKILTEKEIKVDFYASNDSDSM
Ga0181379_10502021	3300017783	Seawater	MNNSNFWLNSDIKGTLNLLELANTQKAITNFVKILTDKESPVEFYSNNDGDSMTNGKKIT
Ga0181379_13391993	3300017783	Seawater	MNNSNFWLKYKPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHASNDSDSM
Ga0181577_105154291	3300017951	Salt Marsh	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHASNDSDSMTNGKRITLSSTISMNTIDS
Ga0206127_12000841	3300020169	Seawater	MNSSIFWLTYEPEGKFNLLELANTQRAITNFVKILTEKEI
Ga0206124_102927681	3300020175	Seawater	MNSSIFWLTYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHANK
Ga0206129_102172303	3300020182	Seawater	MNSSIFWLTYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHANNDGDSMTNGKRI
Ga0211532_103863481	3300020403	Marine	MNNSNFWLNNDIKGGLNLLELANTQKAITNFVKILTNKEIPVEFYSNNKGDSMTDGKKITISSSISAN
Ga0211523_102861863	3300020414	Marine	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEREIKVDFQSNNDTDSFTNGKRITISSTITM
Ga0211581_103064751	3300020429	Marine	MNNSNFWLSNDIKGGLNLLELANTQKAITNFVKILTNKEIPVEFYSNNDGDSMTNGKKITISSSISSNTVDS
Ga0211518_105656221	3300020440	Marine	MNNSNFWLTYEPEGKFNLLELADTQRAITNFVKILTEKEIKVDFHASNDSDSMTNGKRITLSSTISMNTIDSV
Ga0211641_105761971	3300020450	Marine	MDNSKFWLKYTPEGYFNLIELANTQRAITNFVKILTNKEIKVDFYSNNRVDSY
Ga0211473_106166201	3300020451	Marine	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFQSNNDADSF
Ga0211577_105983203	3300020469	Marine	MNNSNFWLTYEPEGKFNLLELANTQRAITNFVKILTEKE
Ga0206126_100256911	3300020595	Seawater	MNSSIFWLTYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHA
Ga0213860_101790821	3300021368	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKE
Ga0213866_102391063	3300021425	Seawater	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEREIKVDFHASNDSDSMTNGKRITLSSTISMNTI
Ga0212024_10457313	3300022065	Aqueous	MNNSNFWLKHEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHANNDGDSMTNGKRITISSTISMNTIDS
Ga0212024_10487291	3300022065	Aqueous	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEREIK
Ga0212021_10079851	3300022068	Aqueous	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEREIKVDFHASNDSDSMTDGKRITLSSTI
Ga0212021_10678963	3300022068	Aqueous	MNSSNFWLTHEPEGKFNLLELANTQRAITNFVKILTEREIKVDFHANNDGDSMTNGKRITISSTIS
Ga0208298_10613612	3300025084	Marine	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEREIKVDFHASNDSDSM
Ga0208792_10753942	3300025085	Marine	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTER
Ga0209348_10398606	3300025127	Marine	MDNSRFWLKYAPEGYFNLIELANTQRAITNFVKILTNKEIKVDFYSNNNIDSFTNGKKITISST
Ga0209348_11002124	3300025127	Marine	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHSNNDADSLTNG
Ga0208795_10267195	3300025655	Aqueous	MNNSNFWLTYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHANNDGDSMTNGKRITISSTISMNT
Ga0208162_10264981	3300025674	Aqueous	MNNSNFWLTYEPEGKFNLLELANTQRAITNFVKILT
Ga0208019_10893601	3300025687	Aqueous	MNNSNFWLTYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHANNDGDS
Ga0208767_10390101	3300025769	Aqueous	MNNSNFWLTYEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHANNDGD
Ga0208767_10958384	3300025769	Aqueous	MNSSNFWLKHEPEGKFNLLELANTQRAITNFVKILTEKEIKVDFHANNDGD
Ga0208543_11064621	3300025810	Aqueous	MNSSNFWLTHEPEGKFNLLELANTQRAITNFVKILTEREIKVDFHANNDGDSMTNGKRITISS
Ga0209193_11291542	3300025816	Pelagic Marine	MNNSNFWLKYEPEGKFNLLELANTQRAITNFVKILTEREIKVDF
Ga0208542_10473891	3300025818	Aqueous	MNSSNFWLTHEPEGKFNLLELANTQRAITNFVKILTEREIKVDFHANNDGDSMTNGKRITISSTISMN
Ga0208547_10409111	3300025828	Aqueous	MNSSNFWLTHEPEGKFNLLELANTQRAITNFVKILTEREIKVDFHANNDGDSMTNGKRITISSTISMNTID
Ga0208917_12221501	3300025840	Aqueous	MNNSNFWLTYEPEGKFNLLELANTQRAITNFVKILTEKEIKVD
Ga0183748_10183788	3300029319	Marine	MNNSNFWLKYEPEGKFHLLELANTQRAITNFVKILTE
Ga0183748_11299261	3300029319	Marine	MDNSKFWLKYAPDGYFNLIELANTQRAITNFVKILTKKEIKVDFYSTNKRDSFTNGKEITISS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091847

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences