Metagenome Family F091795

Basic Information
Family ID	F091795
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	48 residues
Representative Sequence	ALATDNGYFDQAHLTLDVGRFAGATPGRLASVGVADFSKTRCDDLP
Number of Associated Samples	90
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.20 %
% of genes from short scaffolds (< 2000 bps)	95.33 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Most Common Taxonomy
Group	Bacteria (88.785 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.215 % of family members)
Environment Ontology (ENVO)	Unclassified (29.907 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.271 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.32% β-sheet: 0.00% Coil/Unstructured: 75.68%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13649	Methyltransf_25	2.80
PF00903	Glyoxalase	1.87
PF08003	Methyltransf_9	1.87
PF12681	Glyoxalase_2	1.87
PF05787	DUF839	1.87
PF00069	Pkinase	1.87
PF13340	DUF4096	1.87
PF01068	DNA_ligase_A_M	1.87
PF05724	TPMT	0.93
PF12697	Abhydrolase_6	0.93
PF08241	Methyltransf_11	0.93
PF04679	DNA_ligase_A_C	0.93
PF07687	M20_dimer	0.93
PF01171	ATP_bind_3	0.93
PF01161	PBP	0.93
PF07075	DUF1343	0.93
PF03544	TonB_C	0.93
PF01546	Peptidase_M20	0.93
PF04055	Radical_SAM	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.48
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.80
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.87
COG3211	Secreted phosphatase, PhoX family	General function prediction only [R]	1.87
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	0.93
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.93
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.93
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	0.93
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.93
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	0.93
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.93
COG3876	Exo-beta-N-acetylmuramidase YbbC/NamZ, DUF1343 family	Cell wall/membrane/envelope biogenesis [M]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.79 %
Unclassified	root	N/A	11.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.79 %
Unclassified	root	N/A	11.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.79 %
Unclassified	root	N/A	11.21 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.21 %
Unclassified	root	N/A	11.21 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	7.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.74 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.74 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.93 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.67 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	0.93 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.93 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.93 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.67 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.93 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	0.93 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.67 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.93 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.93 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	0.93 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.67 %
Actinoplanes ovalisporus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes ovalisporus	0.93 %
Mycobacterium heckeshornense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium heckeshornense	0.93 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	0.93 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002GL8VX	Not Available	503	Open in IMG/M
2199352025\|deepsgr__Contig_126106	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300000559\|F14TC_102460415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300000955\|JGI1027J12803_108740779	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300004156\|Ga0062589_102555939	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005295\|Ga0065707_11158745	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005330\|Ga0070690_100352082	All Organisms → cellular organisms → Bacteria → Proteobacteria	1069	Open in IMG/M
3300005334\|Ga0068869_101305354	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300005338\|Ga0068868_100542683	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300005340\|Ga0070689_100087644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2449	Open in IMG/M
3300005441\|Ga0070700_101834227	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005444\|Ga0070694_101065861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	673	Open in IMG/M
3300005445\|Ga0070708_100582630	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300005471\|Ga0070698_101011038	All Organisms → cellular organisms → Bacteria → Proteobacteria	779	Open in IMG/M
3300005544\|Ga0070686_101319963	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300005545\|Ga0070695_100845266	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005564\|Ga0070664_100839557	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300005764\|Ga0066903_105031325	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300005764\|Ga0066903_106828489	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300006028\|Ga0070717_11868830	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300006755\|Ga0079222_12578487	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300006881\|Ga0068865_100332253	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300006904\|Ga0075424_100286649	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300006904\|Ga0075424_100915100	All Organisms → cellular organisms → Bacteria → Proteobacteria	936	Open in IMG/M
3300007076\|Ga0075435_101435227	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300009011\|Ga0105251_10254557	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300009098\|Ga0105245_12045756	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300009100\|Ga0075418_10219922	All Organisms → cellular organisms → Bacteria	2022	Open in IMG/M
3300009100\|Ga0075418_11154410	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300009100\|Ga0075418_12807991	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300009147\|Ga0114129_12165542	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300009147\|Ga0114129_13517901	Not Available	500	Open in IMG/M
3300009174\|Ga0105241_11074413	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300009177\|Ga0105248_10458003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium heckeshornense	1438	Open in IMG/M
3300010359\|Ga0126376_11068224	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300010362\|Ga0126377_11265973	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300010362\|Ga0126377_13109375	Not Available	536	Open in IMG/M
3300010366\|Ga0126379_10029011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4287	Open in IMG/M
3300010366\|Ga0126379_11501322	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300010398\|Ga0126383_11423947	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300010399\|Ga0134127_13741121	Not Available	500	Open in IMG/M
3300010401\|Ga0134121_10352691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1317	Open in IMG/M
3300010403\|Ga0134123_11680654	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300012285\|Ga0137370_10836914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300012355\|Ga0137369_10229741	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300012899\|Ga0157299_10210602	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300012907\|Ga0157283_10074495	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300012916\|Ga0157310_10325913	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300012971\|Ga0126369_11717722	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300013307\|Ga0157372_12551633	Not Available	587	Open in IMG/M
3300013308\|Ga0157375_12839396	Not Available	579	Open in IMG/M
3300013308\|Ga0157375_13576612	Not Available	517	Open in IMG/M
3300014969\|Ga0157376_11608253	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300015241\|Ga0137418_10253701	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300015372\|Ga0132256_102270723	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300015374\|Ga0132255_100987000	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300015374\|Ga0132255_102649186	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300015374\|Ga0132255_105847042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300016294\|Ga0182041_10738665	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300016294\|Ga0182041_11732168	Not Available	579	Open in IMG/M
3300016341\|Ga0182035_10546258	All Organisms → cellular organisms → Bacteria → Proteobacteria	995	Open in IMG/M
3300017792\|Ga0163161_10247024	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300017792\|Ga0163161_10743519	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300019361\|Ga0173482_10779440	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300019362\|Ga0173479_10745172	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300025795\|Ga0210114_1036028	Not Available	1032	Open in IMG/M
3300025893\|Ga0207682_10236004	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300025907\|Ga0207645_11116199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300025910\|Ga0207684_11082874	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300025914\|Ga0207671_10554922	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300025927\|Ga0207687_10867161	Not Available	772	Open in IMG/M
3300025936\|Ga0207670_11634712	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300025961\|Ga0207712_10683781	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	894	Open in IMG/M
3300025986\|Ga0207658_11302148	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300026023\|Ga0207677_11233907	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300026116\|Ga0207674_11028329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes ovalisporus	793	Open in IMG/M
3300027179\|Ga0208955_100102	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300027880\|Ga0209481_10689435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300027909\|Ga0209382_10066872	All Organisms → cellular organisms → Bacteria	4251	Open in IMG/M
3300027909\|Ga0209382_10323956	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300027909\|Ga0209382_11822040	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300028380\|Ga0268265_12293372	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300028381\|Ga0268264_12078317	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300028381\|Ga0268264_12572702	Not Available	514	Open in IMG/M
3300028768\|Ga0307280_10266850	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300031231\|Ga0170824_101157798	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300031562\|Ga0310886_10126474	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300031719\|Ga0306917_11493645	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300031777\|Ga0318543_10132507	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300031777\|Ga0318543_10431205	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300031820\|Ga0307473_11401178	Not Available	527	Open in IMG/M
3300031833\|Ga0310917_10718711	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300031858\|Ga0310892_10280547	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300031892\|Ga0310893_10386671	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300032003\|Ga0310897_10247187	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300032012\|Ga0310902_10386582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	887	Open in IMG/M
3300032012\|Ga0310902_10776286	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300032017\|Ga0310899_10120683	All Organisms → cellular organisms → Bacteria → Proteobacteria	1085	Open in IMG/M
3300032035\|Ga0310911_10355487	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300032044\|Ga0318558_10249032	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300032051\|Ga0318532_10228467	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300032060\|Ga0318505_10182843	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300032122\|Ga0310895_10395347	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300032180\|Ga0307471_102415205	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300032205\|Ga0307472_102488371	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300033004\|Ga0335084_10566473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1164	Open in IMG/M
3300034354\|Ga0364943_0345690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.68%
Host-Associated	Host-Associated	38.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.75%
Plants	Host-Associated → Plants	38.32%
Aquatic	Environmental → Aquatic	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.15%
Marine	Environmental → Aquatic → Marine	0.93%
Floodplain	Environmental → Terrestrial → Floodplain	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.50%
Loam	Environmental → Terrestrial → Soil → Loam	13.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.80%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.35%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.87%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.87%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.93%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Bulk Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300025795	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027179	Bulk soil microbial communities from Harvard Forest, USA - 2Bulk_unsorted metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_11488300	2170459003	Grass Soil	ESQALFASENGYFDQSHLSVDAARFAGATPGDLSSRHVADFSKTRCDDLL
deepsgr_02023530	2199352025	Soil	PARSGAALASETGYFDQAHLTLDMTRLAGDTPGHVASRSVADFYKTRCDGPL
F14TC_1024604151	3300000559	Soil	SGAALASETGYFDQAHLTLDTARLAGATPRRLASRHAAGFYKTRCDAPL*
JGI1027J12803_1087407792	3300000955	Soil	PTAAALATDNGYFDQAHLTLDVARFSGATPGRLASVGVTDFSKTRCDDLP*
Ga0062589_1025559391	3300004156	Soil	ETGYFDQAHLTLDLTRMAGATPRHLASRSVADFYKTRCDVAL*
Ga0065707_111587451	3300005295	Switchgrass Rhizosphere	RPAAALAVQNGYFDQAHLTLDVARFAGATPGLLASAGVSDFSKTRCDDLP*
Ga0070690_1003520823	3300005330	Switchgrass Rhizosphere	YFDQAHLTLDVGRFAGATPGRLASVGVADFSKTRCDDLP*
Ga0068869_1013053542	3300005334	Miscanthus Rhizosphere	QLAPRPVASLATENGYFDQSHLTHDAVRLSGATPGELVPRARTDFAKTRCDELL*
Ga0068868_1005426833	3300005338	Miscanthus Rhizosphere	QTTLKEMEHAPTRSAARLASDAGYFDQAHLTLELGRFAGETPRRLASTSVADFSKTRCDDAL*
Ga0070689_1000876441	3300005340	Switchgrass Rhizosphere	AKAVALATDNGYFDQAHLTLDVARFAGATPGRLASAGVADFSKTRCDDLP*
Ga0070700_1018342272	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	GMDRSPRPKAAALATDNGYFDQAHLTLDVGRFAGATPGRLASVGVADFSKTRCDDLP*
Ga0070694_1010658611	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GYFDQAHLTLDLARFAGATPRRLASSAVADLSKTTWAGT*
Ga0070708_1005826301	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	AASLASENGYFDQSHLTVDVGRFAGATPGDLSSRSVADFSKTRCDDLL*
Ga0070698_1010110381	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	ASLAIENGYFDQSHLHHDTVRFSGTTPGDLVPRAMTDFSKTRCDELL*
Ga0070686_1013199632	3300005544	Switchgrass Rhizosphere	AALASETGYFDQAHLTLDTGRLAGATPRRLASRHAADFYKTRCDAPL*
Ga0070695_1008452662	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	DAGYFDQAHLTLELGRFAGETPRRLASTSVSDFSKTRCDDAL*
Ga0070664_1008395573	3300005564	Corn Rhizosphere	FDQSHLTHDAVRFSGATPGDLVPRAMTDFSKTRCDELL*
Ga0066903_1050313252	3300005764	Tropical Forest Soil	LASDNGYFDQAHLTLDVGRLAGTTPGRLASESVADFSKTRCDDLP*
Ga0066903_1068284891	3300005764	Tropical Forest Soil	YFDQAHLTTEVGRFSGATPRVLASDGVSDFSKTRCDDLP*
Ga0070717_118688302	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	TLHGMEQVPAQPASALAVQNGYFDQAHLTLDVARFSGATPGVLASDGVSDFSKTRCDDLP
Ga0079222_125784871	3300006755	Agricultural Soil	ALASDNGFFDQSHLTFDLARFAGTTPGRLAAAGVADFSKTRCDDLS*
Ga0068865_1003322531	3300006881	Miscanthus Rhizosphere	PGRPAAALATGNGFFDQAHLTVDVSRFAGATPGRLAATGVADFSKTRCNDLP*
Ga0075424_1002866491	3300006904	Populus Rhizosphere	APARTAAALAADNGYFDQAHLTLDVARFAGATPGHLAAAEVSDFSKTRCDDLP*
Ga0075424_1009151001	3300006904	Populus Rhizosphere	TRSAAALASETGYFDQAHLTLDLARFAAATPRRLASNCVADFSKTRCDDPL*
Ga0075435_1014352273	3300007076	Populus Rhizosphere	ESGYFDQAHLTVNVARFAGATPGRLSTRGVADFSKTRCDDLP*
Ga0105251_102545571	3300009011	Switchgrass Rhizosphere	VASLALENGYFDQSHLTHDTVRFSGNTPGDLVPRAMTDFSKTRCDELL*
Ga0105245_120457562	3300009098	Miscanthus Rhizosphere	DAGYFDQAHLTLELGRFAGDTPRRLASTSVSDFSKTRCDDAL*
Ga0075418_102199224	3300009100	Populus Rhizosphere	ERLPTRPGAELAAENGYFDQAHLTLDLARFTGDTPRHLASNRVSEFSKTRCD*
Ga0075418_111544103	3300009100	Populus Rhizosphere	FDQAHLTLDVNRFSGATPGRLASTGVADFSKTRCDDLP*
Ga0075418_128079912	3300009100	Populus Rhizosphere	DQAHLTLDLTRFAGATPGHLTSRCVADFSKTRCDDLP*
Ga0114129_121655421	3300009147	Populus Rhizosphere	DQAHLTLDMTRLAGDTPGHVASRSADFYKTRCDGPL*
Ga0114129_135179011	3300009147	Populus Rhizosphere	GYFDQAHLTLDVTRLAGATPRHLASQSVADFSKTRCDDLP*
Ga0105241_110744131	3300009174	Corn Rhizosphere	GNGFFDQAHLTVDVSRFAGATPGRLAATGVADFSKTRCNDLP*
Ga0105248_104580031	3300009177	Switchgrass Rhizosphere	HLTHDAVRLSGATPGELVPRARTDFAKTRCDELL*
Ga0126376_110682241	3300010359	Tropical Forest Soil	LAVQNGYFDQAHLTLDVARFSGATPGVLASDGVSDFSKTRCDDLP*
Ga0126377_112659731	3300010362	Tropical Forest Soil	GNAPARSAALLASDTGYFDQAHLTLDMGRFAGETPRRLASNSVSDFSKTRCDDGL*
Ga0126377_131093751	3300010362	Tropical Forest Soil	MDDMPDRTAAALASENGFFDQAHLTLDVARLAGATPRHLASVGVSDFSKTRCDDLP*
Ga0126379_100290111	3300010366	Tropical Forest Soil	PALAPAALASDNGFFDQSHLTLDLTRFAGTTPGRLAAGGVADFSKTRCDDLP*
Ga0126379_115013223	3300010366	Tropical Forest Soil	QAHLTLDVARFAGATPGVLASDGVSDFSKTRCDDLP*
Ga0126383_114239473	3300010398	Tropical Forest Soil	QSGAALATETGYFDQSHLTTNLSRFAGATPRHLASRCVSDFYKTRCDDVP*
Ga0134127_137411212	3300010399	Terrestrial Soil	ATLKEIDRSPAQTAARLASETGYFDQAHLTLALGQLAGDTPRRLATTSVSDFSKTRCDDTL*
Ga0134121_103526911	3300010401	Terrestrial Soil	PVASLAMENGYFDQSHLTHDVVRFSGATPGDLVPRAMTDFAKTRCDELL*
Ga0134123_116806541	3300010403	Terrestrial Soil	HLTLALGQLAGDTPRRLATTSVSDFSKTRSDDTL*
Ga0137370_108369141	3300012285	Vadose Zone Soil	VIRFQATLHEMNDAPDRTAATLASENGYFDQAHLALDVARFAGATPGRLASTAVADFSKTRCDDLL*
Ga0137369_102297411	3300012355	Vadose Zone Soil	EMEQSAQRPVASLAIENGYFDQSHLTHDAVRFSGATPGDLVPRAMTDFSKTRCDELL*
Ga0157299_102106023	3300012899	Soil	QAHLTLDTGRLAGATPRRLASRHAADFYKTRCDAPL*
Ga0157283_100744951	3300012907	Soil	PTASLAAENGYFDQSHLMLDTARFAGATPGHLASRAVSDFSKTRCDDLL*
Ga0157310_103259131	3300012916	Soil	ALASQTGYFDQAHLTLDMTRLAGDTPGHVASRSAADFYKTRCDGPL*
Ga0126369_117177221	3300012971	Tropical Forest Soil	QAHLTLDLARLAGTTPGRLASVGVADFSKTRCDDLP*
Ga0157372_125516331	3300013307	Corn Rhizosphere	HLTLDVARFAGATPGRLASAGVADFSKTRCDDLS*
Ga0157375_128393963	3300013308	Miscanthus Rhizosphere	HEMDDTPGRPAAALATGNGFFDQAHLTVDVSRFAGATPGRLAATGVADFSKTRCNDLP*
Ga0157375_135766121	3300013308	Miscanthus Rhizosphere	TQSGAALASEAGYFDQAHRTSDLARFAGATPRHLASRCVADFSKTRCDGPL*
Ga0157376_116082531	3300014969	Miscanthus Rhizosphere	LAPRPVASLATENGYFDQSHLTHDAVRLSGATPGELVPRARTDFAKTRCDELL*
Ga0137418_102537013	3300015241	Vadose Zone Soil	NTPGRASAALALKNGYFDQAHLALDLTRFAGSTPSRLSNGVADFSKTRCE*
Ga0132256_1022707232	3300015372	Arabidopsis Rhizosphere	TLHHMEDSPRQSPALLAAGNGYFDQSHLSVDAARFAGETPGRLSSRRVADFSKTRCDDLL
Ga0132255_1009870001	3300015374	Arabidopsis Rhizosphere	KQSGAALATETGYFDQAHLTTHLSRFAGATPRHLASRCVSDFSKTRCDDLP*
Ga0132255_1026491862	3300015374	Arabidopsis Rhizosphere	ETGYFDQAHLTMNLTRFAGATPRRLATSSVSDFSKTSCDDAS*
Ga0132255_1058470422	3300015374	Arabidopsis Rhizosphere	ALASEQGYFDQAHLTLDLTRLAGATPGRLAAVGVADFSKTRCDDLP*
Ga0182041_107386651	3300016294	Soil	SIVRFQSTLDQMQQEPGRSVAFIAAETGFFDQAHLTVNIARFAGATPGNLLSGSVSDFSKTRCDDLP
Ga0182041_117321681	3300016294	Soil	TLHEMEDAPGRTAAALASENGYFDQAHLAGDVARFAGATPGRLASVGVADFSKTRCEDLP
Ga0182035_105462581	3300016341	Soil	RTAAALATENGFFDQSHLTVAVSRFGGATPGRLAAAGVADFSKTRCNDLP
Ga0163161_102470241	3300017792	Switchgrass Rhizosphere	QSHLTNDSVRLSGATPGDLVSRAMTDFSKTRCDELL
Ga0163161_107435193	3300017792	Switchgrass Rhizosphere	YFDQAHLTLDMTRLAGDTPGHVASRSVADFYKTRCDGPL
Ga0173482_107794402	3300019361	Soil	ALASANGFFDQAHLTLDLGRFAKTTPSRLASVGVADFSKSRCNDLP
Ga0173479_107451721	3300019362	Soil	SETGYFDQAHLNLDMTRLAGDTPGHVASRSVSDFYKTRCDGPL
Ga0210114_10360284	3300025795	Natural And Restored Wetlands	LATSNGYFDQAHLTLDVTRFAGATPGRLASVGVADFSKTHCDDLP
Ga0207682_102360043	3300025893	Miscanthus Rhizosphere	TENGYFDQAHLTLDMAQLADATPGHLASRSVADFYKTRCDETP
Ga0207645_111161992	3300025907	Miscanthus Rhizosphere	FDQSHLTLNLTRFAGETPGRLATNGVADFSKTRCYDPF
Ga0207684_110828741	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LHQMEQSPRQSAASLASENGYFDQSHLTVDVGRFASATPGDLSSRSVADFSKTRCDDLL
Ga0207671_105549222	3300025914	Corn Rhizosphere	TIIRFQATLHEMDDTPGRPAAALATGNGFFDQAHLTVDVSRFAGATPGRLAATGVADFSKTRCNDLP
Ga0207687_108671611	3300025927	Miscanthus Rhizosphere	MENGYFDQSHLTHDTVRFSGVTPGDLVPRAMTDFAKTRCDELL
Ga0207670_116347122	3300025936	Switchgrass Rhizosphere	SMEHVPSPTAAALATDNGYFDQAHLTLDVARFSGATPGRLASVGVTDFSKTRCDDLP
Ga0207712_106837813	3300025961	Switchgrass Rhizosphere	FDQAHLTLDVARFAGATPGRLASAGVADFSKTRCDDLP
Ga0207658_113021481	3300025986	Switchgrass Rhizosphere	TPGRPAAALAIGNGFFDQAHLTVDVSRFAGATPGRLAATGVADFSKTRCNDLP
Ga0207677_112339071	3300026023	Miscanthus Rhizosphere	TRSAARLASDAGYFDQAHLTLELGRFAGETPRRLASTSVADFSKTRCDDAL
Ga0207674_110283292	3300026116	Corn Rhizosphere	GYFDQAHLTLDSTRFAGATPGHLTSRCVTDFSKTRCDNLP
Ga0208955_1001021	3300027179	Bulk Soil	DQSHLTVDVGRFATATPGDLSSRSVADFSKTRCDDLL
Ga0209481_106894352	3300027880	Populus Rhizosphere	VASLATEVGYFDQAHLTVDVSRYAGATPGRLLSERVSDFSKTRCDVPF
Ga0209382_100668725	3300027909	Populus Rhizosphere	DQAHLTLDVSRFAGATPARLASEGVADFSKTRCDDLP
Ga0209382_103239564	3300027909	Populus Rhizosphere	QMEHAPEQSVAVLASESGYFDQAHLTVDLSRFAGATPGRLMSRGVSDFSKTRCDDSL
Ga0209382_118220401	3300027909	Populus Rhizosphere	AALASDNGYFDQAHLTLDLARFGGATPGQMAASGVADFSKTRCDDLS
Ga0268265_122933722	3300028380	Switchgrass Rhizosphere	ASETGYFDQAHLTLALGQLAGDTPRRLATTSVSDFSKTRCDDLP
Ga0268264_120783171	3300028381	Switchgrass Rhizosphere	FQATLHGMEQSARRPVASLALENGYFDQSHLTHDTVRFSGNTPGDLVPRAMTDFSKTRCDELL
Ga0268264_125727022	3300028381	Switchgrass Rhizosphere	ENGYFDQSHLTHDTVRFSGVTPGDLVPRAMTDFAKTRCDELL
Ga0307280_102668501	3300028768	Soil	ASLALENGYFDQSHLTHDAVRFSGDTPGDLVPRAMTDFSKTRCDELL
Ga0170824_1011577981	3300031231	Forest Soil	LAMENGYFDQSHLTHDTVRFSGDTPGDLVPRAMTDFSKTRCDELL
Ga0310886_101264741	3300031562	Soil	FFDQAHLTLDLGRFAKTTPSRLASVGVADFSKTRCNDLP
Ga0306917_114936451	3300031719	Soil	TETGYFDQSHLTTNMSRFAGATPRHLASRCVSDFYKTRCDDLS
Ga0318543_101325073	3300031777	Soil	ALASETGYFDQAHLTLNLTRFAGATPSLLASKYVADFSKTRCDDLP
Ga0318543_104312052	3300031777	Soil	QQEPGRSVAFLAAETGFFDQAHLTVNVARFAGATPGHLLSAGVSDFSKTRCDDLP
Ga0307473_114011781	3300031820	Hardwood Forest Soil	QSPRQSAASLASENGYFDQSHLTVDVGRFASATPGDLSSRAVADFSKTRCDDLL
Ga0310917_107187111	3300031833	Soil	EMEDAPGRTAAALASENGYFDQAHLAGDVARFAGATPGRLASVGVADFSKTRCEDLP
Ga0310892_102805471	3300031858	Soil	AHLTLDVSRFAGATPARLAAEGVADFSKTRCDDLP
Ga0310893_103866711	3300031892	Soil	PGLSVSNLASETGYFDQSHLTLDLTRFAGETPGRLATSGVADFSKTRCYDLPRLRE
Ga0310897_102471871	3300032003	Soil	SLASEAGYFDQAHLTLDLTRMAGATPRHLASRSVADFYKTRCDVAL
Ga0310902_103865821	3300032012	Soil	SEKGFFDQAHLTLQLGRFAGATPGRLASHGLSDFSKTRCDDLP
Ga0310902_107762862	3300032012	Soil	QTTLHSMEHVPSPTAAALATDNGYFDQAHLTLDVARFSGATPGRLASVGVTDFSKTRCDDLP
Ga0310899_101206833	3300032017	Soil	ALATDNGYFDQAHLTLDVGRFAGATPGRLASVGVADFSKTRCDDLP
Ga0310911_103554871	3300032035	Soil	MDDAPGRTAAALATENGFFDQSHLTVAVSRFGGATPGRLAAAGVADFSKTRCNDLP
Ga0318558_102490321	3300032044	Soil	SHLTVAVSRFGGATPGRLAAAGVADFSKTRCNDLP
Ga0318532_102284672	3300032051	Soil	TGYFDQAHLTLNLTRFAGATPSLLASKYVADFSKTRCDDLP
Ga0318505_101828431	3300032060	Soil	QMDDSPSRSAAALASETGYFDQAHLTLNLTRFAGATPSLLASKYVADFSKTRCDDLP
Ga0310895_103953471	3300032122	Soil	YFDQAHLTLDVARFSGATPGRLASVGVTDFSKTRCDDLP
Ga0307471_1024152053	3300032180	Hardwood Forest Soil	KEMEHAPTRSAALLAADAGYFDQAHLTLELGRFAGETPRRLASTSVADFSKTRCDDTL
Ga0307472_1024883712	3300032205	Hardwood Forest Soil	RSGATLATETGYFDQAHLTMDVARFAGATPRHLASRCVSDFSKTRCDDLP
Ga0335084_105664731	3300033004	Soil	FQSTLGQMEQAPAEPAAVLASRAGYFDQAHLSAHVGRFAGATPGDLRSQGVSDFSKTRCDDLP
Ga0364943_0345690_2_169	3300034354	Sediment	EKSPTRSAAALASETGYFDQAHLALDLARFAAATPRHLASSCVADFSKTRCDDAP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091795

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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