Metagenome Family F091054

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091054
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	74 residues
Representative Sequence	LKRILGMLGLALLLAALLTVFVTGSLLAAGDNAKAAQNHYNYEECPCGEPYGDDIPNLWGKPGPHGQGNAA
Number of Associated Samples	47
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	52.78 %
% of genes near scaffold ends (potentially truncated)	22.22 %
% of genes from short scaffolds (< 2000 bps)	50.93 %
Associated GOLD sequencing projects	41
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.963 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment (25.926 % of family members)
Environment Ontology (ENVO)	Unclassified (62.037 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Sediment (saline) (48.148 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 39.39% β-sheet: 0.00% Coil/Unstructured: 60.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF07581	Glug	20.37
PF08281	Sigma70_r4_2	12.96
PF02660	G3P_acyltransf	2.78
PF04542	Sigma70_r2	2.78
PF12728	HTH_17	2.78
PF00215	OMPdecase	2.78
PF02645	DegV	2.78
PF14321	DUF4382	1.85
PF01680	SOR_SNZ	0.93
PF01791	DeoC	0.93
PF13187	Fer4_9	0.93
PF05343	Peptidase_M42	0.93
PF00781	DAGK_cat	0.93
PF00881	Nitroreductase	0.93
PF08240	ADH_N	0.93
PF13240	zinc_ribbon_2	0.93
PF08530	PepX_C	0.93
PF03109	ABC1	0.93
PF13378	MR_MLE_C	0.93
PF13540	RCC1_2	0.93
PF13529	Peptidase_C39_2	0.93
PF03447	NAD_binding_3	0.93
PF12724	Flavodoxin_5	0.93
PF00005	ABC_tran	0.93
PF00589	Phage_integrase	0.93
PF14470	bPH_3	0.93
PF06107	DUF951	0.93
PF06071	YchF-GTPase_C	0.93
PF04879	Molybdop_Fe4S4	0.93
PF13578	Methyltransf_24	0.93
PF14691	Fer4_20	0.93
PF01564	Spermine_synth	0.93
PF13426	PAS_9	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0344	Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase	Lipid transport and metabolism [I]	2.78
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.78
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.78
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.78
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.78
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.85
COG0012	Ribosome-binding ATPase YchF, GTP1/OBG family	Translation, ribosomal structure and biogenesis [J]	0.93
COG0214	Pyridoxal 5'-phosphate synthase subunit PdxS	Coenzyme transport and metabolism [H]	0.93
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	0.93
COG1362	Aspartyl aminopeptidase	Amino acid transport and metabolism [E]	0.93
COG1363	Putative aminopeptidase FrvX	Carbohydrate transport and metabolism [G]	0.93
COG2195	Di- or tripeptidase	Amino acid transport and metabolism [E]	0.93
COG2936	Predicted acyl esterase	General function prediction only [R]	0.93
COG4481	Uncharacterized conserved protein, DUF951 family	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.89 %
Unclassified	root	N/A	36.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.89 %
Unclassified	root	N/A	36.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.96 %
Unclassified	root	N/A	36.11 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	31.48 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.11 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	31.48 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.93 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.11 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.85 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1.85 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.93 %
Candidatus Poribacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.11 %
Chloroflexi bacterium RBG_13_51_36	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_36	1.85 %
unclassified Candidatus Poribacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria	0.93 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.93 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.11 %
Chloroflexi bacterium RBG_13_51_36	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_36	1.85 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.93 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.93 %
unclassified Anaerolineales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.11 %
Chloroflexi bacterium RBG_13_51_36	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_36	1.85 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.93 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.93 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001371\|BBDRAFT_10319233	All Organisms → cellular organisms → Bacteria	4709	Open in IMG/M
3300001371\|BBDRAFT_10330409	All Organisms → cellular organisms → Bacteria	5233	Open in IMG/M
3300001371\|BBDRAFT_10336895	All Organisms → cellular organisms → Bacteria	2825	Open in IMG/M
3300001371\|BBDRAFT_10350633	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300001751\|JGI2172J19969_10048371	Not Available	1412	Open in IMG/M
3300001751\|JGI2172J19969_10223601	Not Available	515	Open in IMG/M
3300001753\|JGI2171J19970_10014552	Not Available	3608	Open in IMG/M
3300002053\|SMTZ23_10002075	All Organisms → cellular organisms → Bacteria	28603	Open in IMG/M
3300002053\|SMTZ23_10003859	All Organisms → cellular organisms → Bacteria	31394	Open in IMG/M
3300002053\|SMTZ23_10042322	All Organisms → cellular organisms → Bacteria	6170	Open in IMG/M
3300002053\|SMTZ23_10056932	Not Available	7268	Open in IMG/M
3300004449\|Ga0065203_1442358	Not Available	537	Open in IMG/M
3300004481\|Ga0069718_15911207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2412	Open in IMG/M
3300005254\|Ga0068714_10021849	All Organisms → cellular organisms → Bacteria	4513	Open in IMG/M
3300005613\|Ga0074649_1061196	All Organisms → cellular organisms → Bacteria	1555	Open in IMG/M
3300005782\|Ga0079367_1008738	All Organisms → cellular organisms → Bacteria	5190	Open in IMG/M
3300005782\|Ga0079367_1054547	Not Available	1697	Open in IMG/M
3300005782\|Ga0079367_1095703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1211	Open in IMG/M
3300005820\|Ga0078747_140857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1025	Open in IMG/M
3300005821\|Ga0078746_1000309	All Organisms → cellular organisms → Bacteria	9785	Open in IMG/M
3300005821\|Ga0078746_1024956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1241	Open in IMG/M
3300005823\|Ga0078745_1006161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4709	Open in IMG/M
3300005832\|Ga0074469_10013193	Not Available	2334	Open in IMG/M
3300005832\|Ga0074469_10106828	Not Available	911	Open in IMG/M
3300005832\|Ga0074469_10195653	Not Available	1240	Open in IMG/M
3300005832\|Ga0074469_10438347	Not Available	3178	Open in IMG/M
3300005832\|Ga0074469_10670545	Not Available	1359	Open in IMG/M
3300005832\|Ga0074469_10840984	All Organisms → cellular organisms → Bacteria	5443	Open in IMG/M
3300005832\|Ga0074469_11020832	Not Available	878	Open in IMG/M
3300007871\|Ga0111032_1014030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4799	Open in IMG/M
3300008516\|Ga0111033_1148332	All Organisms → cellular organisms → Bacteria	5593	Open in IMG/M
3300009034\|Ga0115863_1023948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	8256	Open in IMG/M
3300009034\|Ga0115863_1028583	All Organisms → cellular organisms → Bacteria	7452	Open in IMG/M
3300009034\|Ga0115863_1181425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2550	Open in IMG/M
3300009509\|Ga0123573_10006072	Not Available	14961	Open in IMG/M
3300009509\|Ga0123573_10052050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4365	Open in IMG/M
3300009509\|Ga0123573_10064004	All Organisms → cellular organisms → Bacteria	3865	Open in IMG/M
3300009509\|Ga0123573_10088587	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3189	Open in IMG/M
3300009509\|Ga0123573_10247109	Not Available	1743	Open in IMG/M
3300009509\|Ga0123573_12114282	Not Available	515	Open in IMG/M
3300009529\|Ga0114919_10016943	All Organisms → cellular organisms → Bacteria	5587	Open in IMG/M
3300009529\|Ga0114919_10434538	Not Available	910	Open in IMG/M
3300010412\|Ga0136852_11211899	Not Available	717	Open in IMG/M
3300010413\|Ga0136851_10022302	All Organisms → cellular organisms → Bacteria	7141	Open in IMG/M
3300010413\|Ga0136851_10138746	All Organisms → cellular organisms → Bacteria	2547	Open in IMG/M
3300010413\|Ga0136851_10233283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1887	Open in IMG/M
3300010995\|Ga0139323_136885	Not Available	765	Open in IMG/M
3300011118\|Ga0114922_10148264	All Organisms → cellular organisms → Bacteria	1992	Open in IMG/M
3300011118\|Ga0114922_10188511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1743	Open in IMG/M
3300011118\|Ga0114922_10214077	Not Available	1623	Open in IMG/M
3300011118\|Ga0114922_10254228	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300011118\|Ga0114922_10764029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	791	Open in IMG/M
3300011118\|Ga0114922_11121309	Not Available	637	Open in IMG/M
3300017963\|Ga0180437_10035833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4915	Open in IMG/M
3300017963\|Ga0180437_10046979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4077	Open in IMG/M
3300017963\|Ga0180437_10065509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3261	Open in IMG/M
3300017963\|Ga0180437_10092549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2586	Open in IMG/M
3300017963\|Ga0180437_10146305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1919	Open in IMG/M
3300017971\|Ga0180438_10066151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3292	Open in IMG/M
3300017991\|Ga0180434_10016113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7586	Open in IMG/M
3300018080\|Ga0180433_10013766	All Organisms → cellular organisms → Bacteria	9297	Open in IMG/M
3300022208\|Ga0224495_10004688	All Organisms → cellular organisms → Bacteria	8052	Open in IMG/M
3300022208\|Ga0224495_10005345	All Organisms → cellular organisms → Bacteria	7441	Open in IMG/M
3300022208\|Ga0224495_10075669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1494	Open in IMG/M
3300022208\|Ga0224495_10311559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	632	Open in IMG/M
3300022208\|Ga0224495_10318182	Not Available	624	Open in IMG/M
3300022217\|Ga0224514_10330284	Not Available	560	Open in IMG/M
3300022221\|Ga0224506_10014603	All Organisms → cellular organisms → Bacteria	4386	Open in IMG/M
3300022223\|Ga0224501_10506131	Not Available	578	Open in IMG/M
3300022307\|Ga0224507_10297186	Not Available	649	Open in IMG/M
3300022309\|Ga0224510_10018265	All Organisms → cellular organisms → Bacteria	3540	Open in IMG/M
3300024433\|Ga0209986_10082782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1786	Open in IMG/M
3300024433\|Ga0209986_10109552	Not Available	1484	Open in IMG/M
3300027690\|Ga0209164_1019585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4124	Open in IMG/M
3300027740\|Ga0214474_1027608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2215	Open in IMG/M
3300027811\|Ga0256868_10037810	All Organisms → cellular organisms → Bacteria	2239	Open in IMG/M
3300027814\|Ga0209742_10011214	All Organisms → cellular organisms → Bacteria	3026	Open in IMG/M
3300027814\|Ga0209742_10087722	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	1017	Open in IMG/M
3300027888\|Ga0209635_10110487	Not Available	2254	Open in IMG/M
3300027888\|Ga0209635_10267228	Not Available	1369	Open in IMG/M
3300027888\|Ga0209635_10383797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_36	1097	Open in IMG/M
3300027888\|Ga0209635_10385759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1093	Open in IMG/M
3300027888\|Ga0209635_11166853	Not Available	516	Open in IMG/M
3300027893\|Ga0209636_10201574	Not Available	1827	Open in IMG/M
3300027893\|Ga0209636_10400520	Not Available	1168	Open in IMG/M
3300027893\|Ga0209636_10625371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	860	Open in IMG/M
3300027893\|Ga0209636_10890999	Not Available	668	Open in IMG/M
3300027901\|Ga0209427_10025830	All Organisms → cellular organisms → Bacteria	6013	Open in IMG/M
3300027901\|Ga0209427_10042658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4419	Open in IMG/M
3300027901\|Ga0209427_10256555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1423	Open in IMG/M
3300027901\|Ga0209427_10380207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_36	1098	Open in IMG/M
3300027901\|Ga0209427_10609792	Not Available	802	Open in IMG/M
3300027901\|Ga0209427_10674177	Not Available	750	Open in IMG/M
3300027917\|Ga0209536_100072551	All Organisms → cellular organisms → Bacteria	4433	Open in IMG/M
3300027917\|Ga0209536_100082719	All Organisms → cellular organisms → Bacteria	4113	Open in IMG/M
3300027917\|Ga0209536_100231339	All Organisms → cellular organisms → Archaea	2317	Open in IMG/M
3300027917\|Ga0209536_100281306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	2082	Open in IMG/M
3300027917\|Ga0209536_100329318	Not Available	1911	Open in IMG/M
3300027917\|Ga0209536_100893646	Not Available	1098	Open in IMG/M
3300027917\|Ga0209536_101515749	Not Available	816	Open in IMG/M
3300027917\|Ga0209536_103199479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	521	Open in IMG/M
3300029827\|Ga0134606_10006127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4962	Open in IMG/M
3300029827\|Ga0134606_10229404	Not Available	572	Open in IMG/M
3300030613\|Ga0299915_10433284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	875	Open in IMG/M
3300031111\|Ga0272444_10782374	Not Available	668	Open in IMG/M
3300031691\|Ga0316579_10004614	All Organisms → cellular organisms → Bacteria	5479	Open in IMG/M
3300032062\|Ga0315551_10049914	All Organisms → cellular organisms → Bacteria	2177	Open in IMG/M
3300032262\|Ga0316194_10733959	Not Available	622	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.22%
Engineered	Engineered	1.85%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	94.44%
Terrestrial	Environmental → Terrestrial	2.78%
Lab Enrichment	Engineered → Lab Enrichment	1.85%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	68.52%
Sediment	Environmental → Aquatic → Sediment	15.74%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	8.33%
Soil	Environmental → Terrestrial → Soil	2.78%
Freshwater	Environmental → Aquatic → Freshwater	1.85%
Defined Media	Engineered → Lab Enrichment → Defined Media	1.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	35.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.74%
Coastal	Environmental → Aquatic → Marine → Coastal	11.11%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	11.11%
Sediment	Environmental → Aquatic → Marine → Sediment	9.26%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	7.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.78%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	1.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.93%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	35.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.74%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	11.11%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	10.19%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	9.26%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	7.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.85%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.93%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.93%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.93%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	25.93%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	10.19%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	9.26%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	9.26%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	9.26%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	7.41%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	6.48%
Marine Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Sediment	3.70%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine	3.70%
Sediment, Intertidal	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Sediment, Intertidal	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Enrichment Culture	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture	1.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.93%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Sediment	0.93%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.93%
Marine Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment	0.93%
Sediment	Environmental → Aquatic → Marine → Unclassified → Unclassified → Sediment	0.93%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001371	Baker-B-sed	Environmental	Open in IMG/M
3300001751	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32	Environmental	Open in IMG/M
3300001753	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-3-24_28	Environmental	Open in IMG/M
3300002053	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR_SMTZ	Environmental	Open in IMG/M
3300004449	Marine microbial communities from Galveston Bay (CSEDA12C HDTS- fraction 12)	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005254	Enrichment culture microbial communities from rom New York Harbor, USA that are MTBE-degrading - MTBE-NYH (New York Harbor Sulfidogenic) MetaG	Engineered	Open in IMG/M
3300005613	Saline sediment microbial communities from Etoliko Lagoon, Greece - sediment	Environmental	Open in IMG/M
3300005782	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf, PM3	Environmental	Open in IMG/M
3300005820	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 75 cmbsf, PM2	Environmental	Open in IMG/M
3300005821	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf, PM1	Environmental	Open in IMG/M
3300005823	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 75 cmbsf, MM2	Environmental	Open in IMG/M
3300005832	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBB	Environmental	Open in IMG/M
3300007871	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 75 cmbsf. Combined Assembly of MM2PM2	Environmental	Open in IMG/M
3300008516	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf. Combined Assembly of MM3PM3	Environmental	Open in IMG/M
3300009034	Intertidal mud flat sediment archaeal communities from Garolim Bay, Chungcheongnam-do, Korea	Environmental	Open in IMG/M
3300009509	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300010412	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300010995	ECM14MPS05_Aassembled -- Sediment microbial communities from coastal marsh in Port Sulphur, LA sequencing method A (2X250bp)	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300017963	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaG	Environmental	Open in IMG/M
3300017971	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaG	Environmental	Open in IMG/M
3300017991	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_2 metaG	Environmental	Open in IMG/M
3300018080	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaG	Environmental	Open in IMG/M
3300022208	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_4_1	Environmental	Open in IMG/M
3300022217	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_24	Environmental	Open in IMG/M
3300022221	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_8_1	Environmental	Open in IMG/M
3300022223	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_8_1	Environmental	Open in IMG/M
3300022307	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_13	Environmental	Open in IMG/M
3300022309	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1	Environmental	Open in IMG/M
3300024433	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)	Environmental	Open in IMG/M
3300027690	Enrichment culture microbial communities from rom New York Harbor, USA that are MTBE-degrading - MTBE-NYH (New York Harbor Sulfidogenic) MetaG (SPAdes)	Engineered	Open in IMG/M
3300027740	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214 HiSeq	Environmental	Open in IMG/M
3300027811	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeq	Environmental	Open in IMG/M
3300027814	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-3-8_10 (SPAdes)	Environmental	Open in IMG/M
3300027888	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32 (SPAdes)	Environmental	Open in IMG/M
3300027893	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54 (SPAdes)	Environmental	Open in IMG/M
3300027901	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300029827	Marine sediment microbial communities from Barataria Bay, New Orleans, USA to study impact of Deep Water Horizon explosion - M1047	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300031111	Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-Form-13	Environmental	Open in IMG/M
3300031691	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA	Host-Associated	Open in IMG/M
3300032062	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-90	Environmental	Open in IMG/M
3300032262	Coastal sediment microbial communities from Maine, United States - Cross River sediment 1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BBDRAFT_103192336	3300001371	Marine Estuarine	ILKRILGMLGLALLLAALLTVFVTGSLLAAGDNAKAAQNHYNYVECPCDEPYGDCEPNPYHEPGPHGQGNAV*
BBDRAFT_103304092	3300001371	Marine Estuarine	MLGLALLLAALLTVFVTGSLLAAGDSAKGAQNNYNHETCPCDEPYGDCIPNLWGLTGVPAPHGQGNAV*
BBDRAFT_103368955	3300001371	Marine Estuarine	LKRILRMLGLALVLTALLVVFITGAVFAAGDNAEAAQNNYEECPFDEPYGDCIPNLWGEPGPHGQEN
BBDRAFT_103506333	3300001371	Marine Estuarine	GLALLLAALLTVFVTGSLLAASDITKAGQNHYNYEECPCDALYGDCIPNLWGEPGPHGQGNAA*
JGI2172J19969_100483713	3300001751	Marine Sediment	AALLTVFVTGSLLAAGDNAKAAQNNYNYEECPCDEPYGDCSPNLWGRPGPHGQGNAA*
JGI2172J19969_102236012	3300001751	Marine Sediment	LKRILGMLGLALLLAALLTVFVTGGLLAAGDNAKSAQNHYNYEECPCDAPYGDDIPNLWGEPGPHGQGNAD*
JGI2171J19970_100145523	3300001753	Marine Sediment	LKRILGMLGLALLLAALLTVFVTGSLLAAGDNAKAAQNNYNYEECPCDEPYGDCSPNLWGRPGPNGQGNAA*
SMTZ23_100020759	3300002053	Marine Sediment	LRRIPGIIGLALLLAALLTVFVTGSIMGASDNAEAAQNNYETCPRDAPYGDDIPNDWGEPGPHGDEDYPA*
SMTZ23_1000385917	3300002053	Marine Sediment	LKRILGILGLALLLAALLTVFVTGSLLAAGDSAEAAQNHYNYEECPGGEPYGDCIPNLWGEPGPHGQGNAA*
SMTZ23_100423227	3300002053	Marine Sediment	LKRIPGILGLALLLAALLTVFVTGSIMAASDSAEAAQNYHEYQECPRDEPYGDDIPNLWGEPGPHGQEDYSA*
SMTZ23_100569329	3300002053	Marine Sediment	LRKILGTLGLALLLASLLTVLVTGSLMAAGDNAKADQNHYNYQECPGGEPYGDDIPNLWGEPGPHGQGNAS*
Ga0065203_14423581	3300004449	Sediment	MDVRGNGQEIKLRRIILKRILGILGLALLLAALLTVFVTGSIMAASDNAKGAQNHYNYQECPGGEPYGDDIPNLWGEPGPHGQGNAA*
Ga0069718_159112071	3300004481	Sediment	LKRILGMLGLALLLAALLTVFVTGSLLAAGDNAETAQNYYHYEECPCDGPYGDDIPNLWGEPGPHGQGNAA*
Ga0068714_100218492	3300005254	Enrichment Culture	LKKILRILGLAMVLTAILVVCITGTIFAAGDNAEVAQNHYNECPCDEPYGDGIPNLWGKPGPHGQPNGVQAE*
Ga0074649_10611961	3300005613	Saline Water And Sediment	LKRILGMLGLALLLAALLTVFVTGSILAAGDNAKAAQNHCSYEECPCDAPYGDDIPNLWGEPGPHGQGNAV*
Ga0079367_10087382	3300005782	Marine Sediment	LKRILGMLGLALLLAALLTVFVTGSLLAAGDNAKAAQNHYNYEECPCGEPYGDDIPNLWGKPGPHGQGNAA*
Ga0079367_10545473	3300005782	Marine Sediment	LKRILGILGLALLLAALLTVFVTGGLLAAGDNARAAQNHYNYQECPGGEPYGDDIPNLWGEPGPHGQGNAA*
Ga0079367_10957032	3300005782	Marine Sediment	MSEVTAKQKKKGDNLKRILRMLGLALVVTALIVVFITGTVAAAGDNAEAAQNNYEECPCDEPYGDCDPNLWGGPGPWGQGNGV*
Ga0078747_1408571	3300005820	Marine Sediment	MLGLALLLAALLIVFITGSLLAASDDTNGAQNHYNYEECPCDAPYGDCIPNLWGE
Ga0078746_10003097	3300005821	Marine Sediment	LKRILGMLGLALLLAALLIVFITGSLLAASDDTNGAQNHYNYEECPCDAPYGDCIPNLWGEPGPHGQGNAA*
Ga0078746_10249561	3300005821	Marine Sediment	MLGLALVVTALIVVFITGTVAAAGDNAEAAQNNYEECPCDEPYGDCDPNLWGGPGPWGQGNGV*
Ga0078745_10061614	3300005823	Marine Sediment	LKRILGMLGLALLLAALLTVFITGSLLAASDNNNGAQNHYNYEECPCDAPYGDCIPNLWGEPGPHGQGNAA*
Ga0074469_100131934	3300005832	Sediment (Intertidal)	MSEVTAKQQKKGDDLKRILRMLGLALVVTALLVVFITGTIAAAGDNADAAQNNYEECPYDEPYGDCVPNLWGEPGPHGQENGV*
Ga0074469_101068282	3300005832	Sediment (Intertidal)	ALLLAALLTVFVTGSLLAASDITKAGQNHYNYEECPCDAPYGDCIPNLWGEPGPHGQGNAA*
Ga0074469_101956532	3300005832	Sediment (Intertidal)	MLGLALVLTALLVVFITGAVFAAGDNAEAAQNNYEECPFDEPYGDCIPNLWGEPGPHGQENGV*
Ga0074469_104383472	3300005832	Sediment (Intertidal)	LKRILRMLGLALVLTALLVVSITGTVVAAGDNAEVAQNHYEECPCDEPYGDCDPNLWGGPGPWGQENGV*
Ga0074469_106705451	3300005832	Sediment (Intertidal)	RRIILKRILGMLGLALLLAALLTVFVTGSLLAAGDNAKAAQNHGEGCPCDEPCGDCIPNDWGGPPPHEQPHGV*
Ga0074469_108409847	3300005832	Sediment (Intertidal)	LKRILGMLGLALLLAALLTVFVTGSLLAAGDSAKGAQNNYNHETCPCDEPYGDCIPNLWGEPGPHGQGNAV*
Ga0074469_110208322	3300005832	Sediment (Intertidal)	ALLLAALLTVFVTGSLLAASDITKAGQNHYNYEECPCDALYGDCIPNLWGEPGPHGQGNAA*
Ga0111032_10140302	3300007871	Marine Sediment	MDGRGNGQEIKLRRTILKRILGMLGLALLLAALLTVFVTGSLLAAGDNAKAAQNHYNYEECPCGEPYGDDIPNLWGKPGPHGQGNAA*
Ga0111033_11483326	3300008516	Marine Sediment	MLGLALLLAALLIVFITGSLLAASDDTNGAQNHYNYEECPCDAPYGDCIPNLWGEPGPHGQGNAA*
Ga0115863_10239488	3300009034	Sediment, Intertidal	MLGLALLLAALLTVFVTGGLLAAGDNAKAAQNHYNYEECPCDAPYGDDIPNLWSEPGPHGQGNAA*
Ga0115863_10285837	3300009034	Sediment, Intertidal	MLGLALLLAALLTVFVTGSLLAASDNADAAQNHYNYEECPCDEPYGDGIHNLWGEPGPHGQGDAA*
Ga0115863_11814254	3300009034	Sediment, Intertidal	MLGLALVLTAILVVSITGAVVAAGDNAEAAQNNYEECPYDEPYGDCVPNLWGEPGPHGQENGV*
Ga0123573_100060724	3300009509	Mangrove Sediment	LKRILGIIGLALLLAALLTVFVTGGLLAAGDNAKDAQYSHNYEECPGGEPYGDCIPNLWGEPGPHGQGNAV*
Ga0123573_100520502	3300009509	Mangrove Sediment	LKRILGMLGLALLLGALLTVFVTGSIMAASDNAKGAQNYCHHEECPFDEPYGDCVPNLWGEPGPHGQALGNLEV*
Ga0123573_100640043	3300009509	Mangrove Sediment	LKRILGIIGLALLLAALLTVFITGGLLAAGDNAKDAQYNHNYQDCPAGEPYGDCIPNLWGLTGEPAPHGQGNAA*
Ga0123573_100885872	3300009509	Mangrove Sediment	MSEVTAKQKKKGDNLKRILRMLGLALVVTALIVVFVTGTVAAASDNAEAAQNNYEECPYDEPYGDCVPNLWGEPGPHGQANGG*
Ga0123573_102471093	3300009509	Mangrove Sediment	MGVRGNGQEIELRRIILKRILGMLGLALLLAALLTVFVTGSLLAAADNAKAAQNSYNYEECPCDEPFGDCIPNLHHEPGPHGQGNAT*
Ga0123573_121142822	3300009509	Mangrove Sediment	MKLRRIILKRILGILGLALLLAALLTVFFTGGLLAAGDNAKGAQNNYNYETCPCDGPYGDDIPNLWGEPGPHGQGNAA*
Ga0114919_100169433	3300009529	Deep Subsurface	MNVGGNGQEIKLRRIILKRILGMLGLALLLAALLTVFVTGSLLAASANAKAAQNHYNYEECPCDAPYGDCIPNLWGEPGPHGQGNAA*
Ga0114919_104345381	3300009529	Deep Subsurface	MVLTAILVVCITGTIFAAGDNAEVAQNHYNECPCDEPYGDCIPNLWGEPGPHGQPNGVQAE*
Ga0136852_112118992	3300010412	Mangrove Sediment	LKRILGIIGLALLLAALLTVFVTGGLLAAGDNAKDAQYSHNYEECPGGEPYGDCIPNLWGEPGPHGQGSAA*
Ga0136851_100223028	3300010413	Mangrove Sediment	MSEVTAKQKKKGDNLKRILKMLGLALVVTALLVVFITGAVAAAGDNAEAAQNNYEECPYDEPYGDCVPNLWGEPGPHGQANGA*
Ga0136851_101387461	3300010413	Mangrove Sediment	MSEVAAKQKKKGDNLKRILRMLGLALVVTALLVVFITGAVAAAGDNAEAAQNNYEECPYDEPYGDCVPNLWGEPGPHGQANGG*
Ga0136851_102332832	3300010413	Mangrove Sediment	MLGLALLLAALLTVFVTGSLLAAADNAKAAQNSYNYETCPCDEPFGDCIPNLHHEPGPHGQGNAT*
Ga0139323_1368852	3300010995	Sediment	LKRILGMLGLALLLAALLTVFVTGSLLAASDSAKGAQNHYNYETCPCEEPYGDCIPNLWGQSGEPAPHGQG
Ga0114922_101482641	3300011118	Deep Subsurface	LKRILGMLGLALLLAALLTVFVTGSLLAAGDSAKGAQNNYNYETCPCDEPYGDCIPNLWGLTGEPAPHGQGNAV*
Ga0114922_101885111	3300011118	Deep Subsurface	MDVGGNGQEIKLRRTVLKRILGMLGLALLLAALLTVFVTGSLLAAGDNDKAVQNHYEQCPCDEPYGDCIPNPYHAPGPHGQGNAA*
Ga0114922_102140772	3300011118	Deep Subsurface	LKRILGILGLALLLAALLTVFVTGSLLAAGDNAEAAQNHHNYQECPGGEPYGDDIPNLWGEPGPHGQGNAA*
Ga0114922_102542282	3300011118	Deep Subsurface	MDVGGNGQEIKLRRIILKRILGMLGLALLLAALLTVFVTGSLLAAGDNAKAAQNHHNYEECPCDAPYGDCIPNPWSGPGQHGQGNPA*
Ga0114922_107640292	3300011118	Deep Subsurface	MLGLALLLAALLTVFITGSLLAASDNNNGAQNHYNYEECPCDAPYGDCIPNLWGEPGPHGQGNAA*
Ga0114922_111213091	3300011118	Deep Subsurface	MLGLALVVTALLVVFITGTVFAAGDNAEAAQNHYEECPYNEPYGDCVPNLWGEPGPHGQGNGVQVP*
Ga0180437_100358335	3300017963	Hypersaline Lake Sediment	LKRILGMLGLALLLAALLTVFVTGSLLAAGGNTNGAYNHYNYEECPCDEPYGDCIPNLWGLTGEPAPHGQGNAA
Ga0180437_100469795	3300017963	Hypersaline Lake Sediment	LKRILGMLGLALLLAALLTVVVTGGLLAAGDDAKAAQNHYNYEECPCGEPYGDDIPNLWGEPGPHGQGSAA
Ga0180437_100655093	3300017963	Hypersaline Lake Sediment	LRKILGILGLALVLAALLSVLITGSLLAAGDNAEAAQNHYEECPYDEPYGDCIPNLWGEPGPHGQSNGV
Ga0180437_100925492	3300017963	Hypersaline Lake Sediment	LKRILGMLGLALLLATLLTVFVTGSLLAASDNANDIQNHYNYEECPCDEPYGDGINNLWGEPGPHGQGDAT
Ga0180437_101463053	3300017963	Hypersaline Lake Sediment	LKRILGMLGLALLLVTLLTVFVTGSLLAASDNVNGTQNHYNYEECPCDEPYGDGINNLWGEPGPHGQGDAT
Ga0180438_100661515	3300017971	Hypersaline Lake Sediment	LKRILGMLGLALLLATLLTVFVTGSLLAASDNVNSTQNHYNYEECPCDEPYGDGINNLWGEPGPHGQGDAT
Ga0180434_100161132	3300017991	Hypersaline Lake Sediment	LKRILGMLGVALLLATLLTVFVTGSLLAASDNANDIQNHYNYEECPCDEPYGDGINNLWGEPGPHGQGDAT
Ga0180433_100137669	3300018080	Hypersaline Lake Sediment	LKRILGMLGVALLLATLLTVFVTGSLLAASDNANDIQNHYNYEECPCDEPYGDGINNLWGEPG
Ga0224495_100046886	3300022208	Sediment	LRRILGILGLALVLAALLLVFVTGGLLAAGDSAEAAQNHYEECPCDEPYGDCIPNLWGEPGPHGQPNGV
Ga0224495_100053459	3300022208	Sediment	MDVGGNGQEIKSRRIILKRILGMLGLALLLAALLTVFVTGSLLAAGDNPKAAQNHGEGCPCDEPCGDCIPNDWDWGGPPPHEQPNGV
Ga0224495_100756692	3300022208	Sediment	LKKILRILGLSITLTAILAVCITGTIFAAGDTAEVAQNHYNECPCDEPYGDCIPNLWGEPGPHGQPNGVQAE
Ga0224495_103115592	3300022208	Sediment	MDVVGNGQEIKLRRIILKRILGMLGLALLLAALLTVFVTGSLLAAGDNAKAAQNHYETCPCDGPYGDDIPNLWGEPGPHGQGNTA
Ga0224495_103181822	3300022208	Sediment	ILRILGLSMVLTGLLVVSITGAVFAAGDNAKVAQNQYEECPCDEPYGDCIPNLWDGSGPHGQGNAVPVE
Ga0224514_103302841	3300022217	Sediment	LKRILRMLGLALVVTALIVVFITGTVAAAGDNAEAAQNNYEECPYDEPYGDCVPNLWGEPGPHGQANGG
Ga0224506_100146036	3300022221	Sediment	MDIQVTAKKIKLRRIILKRILGMLGLALLLAALLTVFVTGSLLAAGDNAKAAQNQYNYEDCPCDEPYGDCDPNLWGEAGPHGQGNAA
Ga0224501_105061311	3300022223	Sediment	LKRILRMLGLALVLTALLVVSITGSLLAAGDNAEVAQNHYEECPCDEPYGDCIPNLWGEPGPHGQENGV
Ga0224507_102971861	3300022307	Sediment	LKRILRMLGLALVVTALLVVFITGTIAAAGDNAEGAQNNYEECPYDEPYGDCVPNLWGEPGPHGQENGV
Ga0224510_100182653	3300022309	Sediment	MLGLALVLAALLLVFVTGGLLAAGDSAEAAQNHYEECPCDEPYGDCIPNLWGEPGPHGQPNGV
Ga0209986_100827823	3300024433	Deep Subsurface	MNVGGNGQEIKLRRIILKRILGMLGLALLLAALLTVFVTGSLLAASANAKAAQNHYNYEECPCDAPYGDCIPNLWGEPGPHGQGNAA
Ga0209986_101095523	3300024433	Deep Subsurface	LKKILRILGLAMVLTAILVVCITGTIFAAGDNAEVAQNHYNECPCDEPYGDCIPNLWGEPGPHGQPNGVQAE
Ga0209164_10195852	3300027690	Enrichment Culture	LKKILRILGLAMVLTAILVVCITGTIFAAGDNAEVAQNHYNECPCDEPYGDGIPNLWGKPGPHGQPNGVQAE
Ga0214474_10276082	3300027740	Soil	MYVRGNGQEIKLRRTILKRILGMLGLALLLAALLTVFVTGSLLAAGDNAETAQNYYHYEECPCDGPYGDDIPNLWGEPGPHGQGNAA
Ga0256868_100378103	3300027811	Soil	LKRILGMLGLALLLAALLTVFVTGSLLAAGDSAKGAQNHYNYEECPCDAPYGDCIPNLWGEPGPHGQG
Ga0209742_100112141	3300027814	Marine Sediment	MFEVTVKQQKKGDNLKRILKMLGLALVVTALLVVFITGAVAAAGDNAEAAQNNYEECPYDEPYGDCVPNLWGEPGPHGQANGG
Ga0209742_100877222	3300027814	Marine Sediment	LKRILGILGLALLLAALLTVFVTGSIMAASDSAEAAQNYHEYQECPRDEPYGDDIPNLWGEPGPHGQEDYSA
Ga0209635_101104872	3300027888	Marine Sediment	LRKILGTLGLALLLASLLTVLVTGSLMAAGDNAKADQNHYNYQECPGGEPYGDDIPNLWGEPGPHGQGNAS
Ga0209635_102672281	3300027888	Marine Sediment	LKRILGMLGLALLLAALLTVFVTGGLLAAGDNAKSAQNHYNYEECPCDAPYGDDIPNLWGEPGPHGQGNAD
Ga0209635_103837971	3300027888	Marine Sediment	ALLLAALLTVFVTGSIMGASDNAEAAQNNYETCPRDAPYGDDIPNDWGEPGPHGDEDYPA
Ga0209635_103857591	3300027888	Marine Sediment	MNVGGNGQEIKLRRIILKRILGMLGLALLLAALLTVFVTGSLLAAGDNAKAAQNNYNYEECPCDEPYGDCSPNLWGRPGPNGQGNA
Ga0209635_111668531	3300027888	Marine Sediment	HSVTISLFLRYGCWCNGQEIELRRIILKRIPGILGLALLLAALLTVFVTGSIMAASDSAEAAQNYHEYQECPRDEPYGDDIPNLWGEPGPHGQEDYSA
Ga0209636_102015742	3300027893	Marine Sediment	MGVRGNGQETKLRRIILKRILGMLGLALLLAALLTVFVTGSIMAAADNAEAAQNHYNYEECPGGEPYGDDIPNLWGEPGPHGQGNAA
Ga0209636_104005201	3300027893	Marine Sediment	LKRILGMLGLALLLAALLTVFVTGSLLAAGDNAKAAQNNYNYEECPCDEPYGDCSPNLWGRPGPNGQGNAA
Ga0209636_106253711	3300027893	Marine Sediment	QRSCNNFPFSSLNMSEVTAKQQKKGDNLKRILRMLGLALVLTAILVVSITGAVVAAGDSAEVAQNHYEECPCDEPYGDCDPNLWGEAGPWGQGNGV
Ga0209636_108909992	3300027893	Marine Sediment	LKRILGMLGLALLLAALLTVFVTGGLLAAGDNAKSAQNHHNYEECPCDAPYGDDIPNLWGEPGPHGQ
Ga0209427_100258306	3300027901	Marine Sediment	EIKLRRIILKRILGMLGLALLLAALLTVFVTGSLLAAGDNAKATQNHYNYEECPCGEPYGDDIPNLWGKPGPHGQGNAA
Ga0209427_100426581	3300027901	Marine Sediment	NGQEIKLRRIILKRILGMLGLALLLAALLPVFVTGSLLAAGDNAKATQNNYNYEECPCDEPYGDCSPNLWGRPGPNGQGNAA
Ga0209427_102565552	3300027901	Marine Sediment	LKRILGMLGLALLLAALLTVFVTGSLLAAGDNATAVQNHYNYEESPCGEPYGDCIPNLYHAPGPHGQGNAA
Ga0209427_103802071	3300027901	Marine Sediment	RRIILKRIPGILGLALLLAALLTVFVTGSIMAASDSAEAAQNYHEYQECPRDEPYGDDIPNLWGEPGPHGQEDYSA
Ga0209427_106097922	3300027901	Marine Sediment	MFEVTVKQQKKGDNLKRILRMLGLALVLTAILVVSITGAVVAAGDNAAGAQNNYEECPYDEPYGDCVPNLWGEPGP
Ga0209427_106741772	3300027901	Marine Sediment	LRRILGILGLALLLAALLTVFITGGLLAASDSADGAHNHYNYEECPGGEPYGDDIPNLWGEPGPHGQGNPA
Ga0209536_1000725515	3300027917	Marine Sediment	LRRIIGILALALVLAALLSVFVTGSLLAAGDNAEAAQNHYEECPYDEPYGDCIPNLWGEPGPHGQSNGA
Ga0209536_1000827191	3300027917	Marine Sediment	LKRIPGILGLALLLAALLTVFVTGSIMAASDSAEAAQNYHEYQECPRDEPYGDDIPNLWGEPGPHGQEDYSA
Ga0209536_1002313392	3300027917	Marine Sediment	LKRILGILGLALLLAALLTVFVTGSIMAASDNAKGAQNHYNYQECPGGEPYGDDIPNLWGEPGPHGQGNAA
Ga0209536_1002813062	3300027917	Marine Sediment	LRRIIGILGLALVLAALLSVFFTGSLLAAGDNAEAAQNHYEECSYDEPYGDCIPNLWGEPGPHGQSNGA
Ga0209536_1003293181	3300027917	Marine Sediment	MFEVTAKQQKKGDNLKRILKMLGLALVVTAILVVFITGAVAAAGDNAEAAQNKYEECPYDEPYGDCVPNLWGEPGPHGQANGG
Ga0209536_1008936461	3300027917	Marine Sediment	LKRFVRLLGLTMGLIALLSISITGAVFAAGDNAEFTKNHYMDCPYDEPYGDDIPNLWGEPGPHGQNQ
Ga0209536_1015157492	3300027917	Marine Sediment	LKRILGILGSALLLAALLTVLVTGSILAASDNARAAQNHYNYQECPGGEPYGDDIPNLWGEPGPHGQGNAA
Ga0209536_1031994792	3300027917	Marine Sediment	MLGLALVVTALLVVFITGVVAAAGDNAEGAQNNYEECPYDEPYGDCVPNLWGEPGPHGQANGG
Ga0134606_100061274	3300029827	Marine Sediment	LKRILGMLGLALLLAALLTVFVTGSLLAAGDNAAAAQNHYNYEECPCDGPYGDCIPNLWGEPGPHGLGNAV
Ga0134606_102294042	3300029827	Marine Sediment	VKRGNGIETEIRRMTLRRFPGMLALSLLLAALLTLLVTCSLLAASDNGSAAQNNYQECPCDGPYGDDIPNLWGEPGPHGQGNTA
Ga0299915_104332842	3300030613	Soil	MDVRGNGQEIKLRRIILKRILGMLGLALLLAALLTVFVTGSLLAAGDSAKGAQNHYNYEECPCDAPYGDCIPNLWGEPGPHGQG
Ga0272444_107823741	3300031111	Marine Sediment	MHIVGNGQEIKLRRIILKRILGMLGLALLLAALLAVFVTGGLLAAGDNAEAAQNYYNYEECPSGEPYGDDIPNLWGEPGPHGQQGGV
Ga0316579_100046142	3300031691	Rhizosphere	LKRILGILGLALLLAALLIVFVSGSIMAASDNAQAAKNHYNYQECPCDGPYGDDIPNLWGEPGPHGQGNAA
Ga0315551_100499143	3300032062	Salt Marsh Sediment	LRRIILKRILGMLGLALLLAALLAVFVTGGLLAAGDNAEAAQNYYNYEECPSGEPYGDDIPNLWGEPGPHGQKGGV
Ga0316194_107339592	3300032262	Sediment	TLRSLFLTGVTISLFLHYVCSGNGQEIKLRRIILRRILGILGLALVLAALLSVFVTGGLLAAGDNAEAAQNHYEECPCEEPYGDCIPNLWGEPGPHGQPNGV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091054

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences