Metagenome / Metatranscriptome Family F091044

Basic Information
Family ID	F091044
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	41 residues
Representative Sequence	GSLALASLDRACRDHRPGVSATLTTTAFDRSSLRWLEIGT
Number of Associated Samples	95
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	9.35 %
% of genes near scaffold ends (potentially truncated)	94.44 %
% of genes from short scaffolds (< 2000 bps)	87.04 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Most Common Taxonomy
Group	Bacteria (89.815 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.963 % of family members)
Environment Ontology (ENVO)	Unclassified (18.519 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.222 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.82% β-sheet: 0.00% Coil/Unstructured: 66.18%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00078	RVT_1	2.78
PF03401	TctC	2.78
PF00211	Guanylate_cyc	2.78
PF13561	adh_short_C2	1.85
PF13458	Peripla_BP_6	1.85
PF00293	NUDIX	1.85
PF02371	Transposase_20	1.85
PF07589	PEP-CTERM	1.85
PF09966	DUF2200	1.85
PF12706	Lactamase_B_2	0.93
PF00561	Abhydrolase_1	0.93
PF00144	Beta-lactamase	0.93
PF04964	Flp_Fap	0.93
PF03806	ABG_transport	0.93
PF13463	HTH_27	0.93
PF14023	DUF4239	0.93
PF07702	UTRA	0.93
PF01872	RibD_C	0.93
PF13417	GST_N_3	0.93
PF07883	Cupin_2	0.93
PF01548	DEDD_Tnp_IS110	0.93
PF14026	DUF4242	0.93
PF12697	Abhydrolase_6	0.93
PF00884	Sulfatase	0.93
PF14707	Sulfatase_C	0.93
PF14087	DUF4267	0.93
PF13185	GAF_2	0.93
PF14319	Zn_Tnp_IS91	0.93
PF00072	Response_reg	0.93
PF13191	AAA_16	0.93
PF07152	YaeQ	0.93
PF00497	SBP_bac_3	0.93
PF00501	AMP-binding	0.93
PF07369	DUF1488	0.93
PF12680	SnoaL_2	0.93
PF01042	Ribonuc_L-PSP	0.93
PF08379	Bact_transglu_N	0.93
PF02129	Peptidase_S15	0.93
PF02900	LigB	0.93
PF01963	TraB_PrgY_gumN	0.93
PF00665	rve	0.93
PF04972	BON	0.93
PF05199	GMC_oxred_C	0.93
PF08388	GIIM	0.93
PF04290	DctQ	0.93
PF13714	PEP_mutase	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.78
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.78
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.78
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.93
COG4681	Uncharacterized conserved protein YaeQ, suppresses RfaH defect	Function unknown [S]	0.93
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.93
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.93
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.93
COG2978	p-Aminobenzoyl-glutamate transporter AbgT	Coenzyme transport and metabolism [H]	0.93
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.93
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.93
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.93
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.93
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.93
COG1916	Pheromone shutdown protein TraB, contains GTxH motif (function unknown)	Function unknown [S]	0.93
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.93
COG1305	Transglutaminase-like enzyme, putative cysteine protease	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG1288	Predicted membrane transporter YfcC, affects glyoxylate shunt	General function prediction only [R]	0.93
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.81 %
Unclassified	root	N/A	10.19 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.81 %
Unclassified	root	N/A	10.19 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.81 %
Unclassified	root	N/A	10.19 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.85 %
Unclassified	root	N/A	10.19 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.96 %
Unclassified	root	N/A	10.19 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.85 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.93 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.44 %
Unclassified	root	N/A	10.19 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.63 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.93 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.93 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.19 %
Unclassified	root	N/A	10.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.63 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.93 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.93 %
Phreatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae	0.93 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	0.93 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.93 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.93 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.93 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.19 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.63 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.93 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.93 %
Phreatobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter	0.93 %
Noviherbaspirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum	0.93 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.93 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.93 %
Methylosinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus	0.93 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.93 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.93 %
Olavius algarvensis associated proteobacterium Delta 3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis associated proteobacterium Delta 3	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.93 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.19 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	5.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.63 %
Paraburkholderia fungorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia fungorum	0.93 %
Phreatobacter stygius	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter stygius	0.93 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.93 %
unclassified Noviherbaspirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → unclassified Noviherbaspirillum	0.93 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	0.93 %
unclassified Methylosinus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus	0.93 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.93 %
Nannocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae	0.93 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.93 %
Olavius algarvensis associated proteobacterium Delta 3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis associated proteobacterium Delta 3	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.93 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.19 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	5.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.63 %
Noviherbaspirillum sp. Root189	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → unclassified Noviherbaspirillum → Noviherbaspirillum sp. Root189	0.93 %
Hyphomicrobium sp. CS1BSMeth3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. CS1BSMeth3	0.93 %
unclassified Singulisphaera	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera	0.93 %
Methylosinus sp. C49	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	0.93 %
Nannocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis	0.93 %
Methylobacterium sp. B34	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. B34	0.93 %
Paraburkholderia fungorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia fungorum	0.93 %
Phreatobacter stygius	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter stygius	0.93 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.93 %
Olavius algarvensis associated proteobacterium Delta 3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis associated proteobacterium Delta 3	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.93 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.19 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	5.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.63 %
Singulisphaera sp. GP187	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	0.93 %
Nannocystis exedens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis → Nannocystis exedens	0.93 %
Noviherbaspirillum sp. Root189	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → unclassified Noviherbaspirillum → Noviherbaspirillum sp. Root189	0.93 %
Hyphomicrobium sp. CS1BSMeth3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. CS1BSMeth3	0.93 %
Methylosinus sp. C49	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	0.93 %
Methylobacterium sp. B34	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. B34	0.93 %
Paraburkholderia fungorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia fungorum	0.93 %
Phreatobacter stygius	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter stygius	0.93 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.93 %
Olavius algarvensis associated proteobacterium Delta 3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis associated proteobacterium Delta 3	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.93 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573000\|GPBTN7E01ESWQZ	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300001397\|JGI20177J14857_1010719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1652	Open in IMG/M
3300001545\|JGI12630J15595_10102845	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300004113\|Ga0065183_10810812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300004479\|Ga0062595_100681430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter stygius	821	Open in IMG/M
3300004643\|Ga0062591_101988563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. B34	599	Open in IMG/M
3300005764\|Ga0066903_103440524	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300005764\|Ga0066903_103980435	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300005785\|Ga0078432_122170	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005921\|Ga0070766_10313135	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300005937\|Ga0081455_10008964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10338	Open in IMG/M
3300007788\|Ga0099795_10036580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	1723	Open in IMG/M
3300009102\|Ga0114948_10145891	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300009102\|Ga0114948_10734968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	766	Open in IMG/M
3300009102\|Ga0114948_10801672	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300009139\|Ga0114949_10025988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4223	Open in IMG/M
3300009143\|Ga0099792_10196744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1144	Open in IMG/M
3300009143\|Ga0099792_10255513	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300009143\|Ga0099792_10396258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	844	Open in IMG/M
3300009147\|Ga0114129_12318105	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300009185\|Ga0114971_10042502	All Organisms → cellular organisms → Bacteria	2877	Open in IMG/M
3300009488\|Ga0114925_10562329	Not Available	804	Open in IMG/M
3300009488\|Ga0114925_10957133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	621	Open in IMG/M
3300009528\|Ga0114920_10868081	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis associated proteobacterium Delta 3	618	Open in IMG/M
3300009632\|Ga0116102_1039023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1544	Open in IMG/M
3300009637\|Ga0116118_1098030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	986	Open in IMG/M
3300009643\|Ga0116110_1012508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3458	Open in IMG/M
3300009698\|Ga0116216_10644241	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300009792\|Ga0126374_10313169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1058	Open in IMG/M
3300009792\|Ga0126374_11142254	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300010159\|Ga0099796_10020191	Not Available	2032	Open in IMG/M
3300010358\|Ga0126370_10131797	Not Available	1791	Open in IMG/M
3300010359\|Ga0126376_13102913	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300010360\|Ga0126372_12234148	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300010362\|Ga0126377_11085500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → unclassified Noviherbaspirillum → Noviherbaspirillum sp. Root189	869	Open in IMG/M
3300010379\|Ga0136449_100924119	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300010379\|Ga0136449_101168889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	1216	Open in IMG/M
3300010400\|Ga0134122_10006929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8428	Open in IMG/M
3300010403\|Ga0134123_10158236	Not Available	1883	Open in IMG/M
3300011112\|Ga0114947_10080538	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1933	Open in IMG/M
3300011112\|Ga0114947_10121232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1628	Open in IMG/M
3300011271\|Ga0137393_10541107	Not Available	999	Open in IMG/M
3300012096\|Ga0137389_11497038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	571	Open in IMG/M
3300012189\|Ga0137388_11074673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	741	Open in IMG/M
3300012207\|Ga0137381_11298077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	621	Open in IMG/M
3300012683\|Ga0137398_10094742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. CS1BSMeth3	1868	Open in IMG/M
3300014657\|Ga0181522_10856703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300014745\|Ga0157377_10267539	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300016319\|Ga0182033_10599704	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300016319\|Ga0182033_11336317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	644	Open in IMG/M
3300016357\|Ga0182032_10716236	Not Available	841	Open in IMG/M
3300016371\|Ga0182034_10907096	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300016387\|Ga0182040_11043425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	683	Open in IMG/M
3300016404\|Ga0182037_11618747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300017822\|Ga0187802_10353305	Not Available	578	Open in IMG/M
3300017924\|Ga0187820_1091817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	865	Open in IMG/M
3300018007\|Ga0187805_10301440	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300018022\|Ga0187864_10498603	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300018033\|Ga0187867_10281420	All Organisms → cellular organisms → Bacteria → Proteobacteria	933	Open in IMG/M
3300018035\|Ga0187875_10141688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1347	Open in IMG/M
3300018040\|Ga0187862_10511076	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300018075\|Ga0184632_10428762	All Organisms → cellular organisms → Bacteria → Proteobacteria	551	Open in IMG/M
3300018082\|Ga0184639_10542990	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300018086\|Ga0187769_10357905	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300018089\|Ga0187774_10708041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	667	Open in IMG/M
3300020230\|Ga0212167_1170829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1339	Open in IMG/M
3300020234\|Ga0212227_1368063	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300020582\|Ga0210395_11404245	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300021479\|Ga0210410_11685097	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300021560\|Ga0126371_11366924	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300022201\|Ga0224503_10131025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	798	Open in IMG/M
3300022720\|Ga0242672_1041766	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	741	Open in IMG/M
(restricted) 3300024302\|Ga0233449_1014749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3923	Open in IMG/M
3300025643\|Ga0209151_1017900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2358	Open in IMG/M
3300025857\|Ga0209014_10022256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3038	Open in IMG/M
3300025888\|Ga0209540_10316992	All Organisms → cellular organisms → Bacteria → Proteobacteria	880	Open in IMG/M
3300026088\|Ga0207641_10363538	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis → Nannocystis exedens	1382	Open in IMG/M
3300026496\|Ga0257157_1037276	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300026508\|Ga0257161_1100453	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300027535\|Ga0209734_1011915	Not Available	1573	Open in IMG/M
3300027674\|Ga0209118_1142761	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300027831\|Ga0209797_10353056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
(restricted) 3300027872\|Ga0255058_10286631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	793	Open in IMG/M
3300027874\|Ga0209465_10079709	All Organisms → cellular organisms → Bacteria → Proteobacteria	1593	Open in IMG/M
3300027903\|Ga0209488_10080287	All Organisms → cellular organisms → Bacteria	2427	Open in IMG/M
3300027909\|Ga0209382_10455528	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
(restricted) 3300027997\|Ga0255057_10021920	All Organisms → cellular organisms → Bacteria	3085	Open in IMG/M
3300029907\|Ga0311329_10986602	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300030659\|Ga0316363_10198675	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300031421\|Ga0308194_10316422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300031543\|Ga0318516_10420400	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300031561\|Ga0318528_10413239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	724	Open in IMG/M
3300031564\|Ga0318573_10108612	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300031573\|Ga0310915_10090677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2049	Open in IMG/M
3300031708\|Ga0310686_105902217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1400	Open in IMG/M
3300031719\|Ga0306917_11063688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631	Open in IMG/M
3300031723\|Ga0318493_10165268	Not Available	1153	Open in IMG/M
3300031765\|Ga0318554_10178615	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300031890\|Ga0306925_11873846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia fungorum	571	Open in IMG/M
3300031954\|Ga0306926_10297591	All Organisms → cellular organisms → Bacteria → Proteobacteria	1997	Open in IMG/M
3300031954\|Ga0306926_10479490	All Organisms → cellular organisms → Bacteria → Proteobacteria	1531	Open in IMG/M
3300031954\|Ga0306926_10513475	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300031962\|Ga0307479_10483669	Not Available	1222	Open in IMG/M
3300032076\|Ga0306924_12614690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	503	Open in IMG/M
3300032160\|Ga0311301_11164503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	993	Open in IMG/M
3300032261\|Ga0306920_100167184	All Organisms → cellular organisms → Bacteria	3278	Open in IMG/M
3300032261\|Ga0306920_103011787	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.37%
Host-Associated	Host-Associated	4.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.81%
Aquatic	Environmental → Aquatic	30.56%
Plants	Host-Associated → Plants	4.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.89%
Marine	Environmental → Aquatic → Marine	16.67%
Freshwater	Environmental → Aquatic → Freshwater	12.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.78%
Sediment	Environmental → Aquatic → Sediment	1.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.85%
Peat	Environmental → Terrestrial → Peat	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.11%
Oceanic	Environmental → Aquatic → Marine → Oceanic	11.11%
Loam	Environmental → Terrestrial → Soil → Loam	6.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.78%
Gulf	Environmental → Aquatic → Marine → Gulf	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.85%
Lake	Environmental → Aquatic → Freshwater → Lake	0.93%
Inlet	Environmental → Aquatic → Marine → Inlet	0.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.93%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.93%
Sediment	Environmental → Aquatic → Marine → Sediment	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.00%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.63%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.70%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Marine → Gulf → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.11%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.19%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	8.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.48%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.78%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Sediment	2.78%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.78%
Seawater	Environmental → Aquatic → Marine → Gulf → Unclassified → Seawater	1.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.85%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.93%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.93%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.93%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.93%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.93%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.93%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300001397	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300004113	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_12 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005785	Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten VI	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009102	Deep subsurface microbial communities from Mariana Trench to uncover new lineages of life (NeLLi) - CR04 metaG	Environmental	Open in IMG/M
3300009139	Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N074 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300009488	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG	Environmental	Open in IMG/M
3300009528	Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaG	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011112	Deep subsurface microbial communities from Mariana Trench to uncover new lineages of life (NeLLi) - CR02 metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300020230	Deep-sea sediment microbial communities from the Mariana Trench, Pacific Ocean - CR02	Environmental	Open in IMG/M
3300020234	Deep-sea sediment microbial communities from the Kermadec Trench, Pacific Ocean - N074	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022201	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_21	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024302 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_200_MG	Environmental	Open in IMG/M
3300025643	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_165m (SPAdes)	Environmental	Open in IMG/M
3300025857	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027872 (restricted)	Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_9	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027997 (restricted)	Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_6	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091044

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N55_11411610	2189573000	Grass Soil	LLALASLDLACRDHCPDVSATLTTTAFDRSSSRWLGISDLIAEPEGP
JGI20177J14857_10107193	3300001397	Arctic Peat Soil	GSLALASLNHTFEILSDFSATFTTVAFDHSSLQWLGIST*
JGI12630J15595_101028451	3300001545	Forest Soil	DGLLALASLDRACRDHRPGVSATLTTTTFNRSSLRWLEIST*
Ga0065183_108108121	3300004113	Pelagic Marine	LIRFRHFSSGSLALASLNRACRDHRPGVSATLTTTALNRSSLRWLEISP*
Ga0062595_1006814302	3300004479	Soil	MVRSGSISIASLNRACRDHRPAVSATLTTVTFDHSSLRWLG
Ga0062591_1019885631	3300004643	Soil	GSLALASLNLACRDHVPAFPPLTTIALDDSSLRWLETCT*
Ga0066903_1034405241	3300005764	Tropical Forest Soil	MAFRHFISGSLALASPDQTRRALVPPFAATLTTIAFDDSSL
Ga0066903_1039804352	3300005764	Tropical Forest Soil	LLSLASLDLACWDHRPGFSATLTTTVFNRSSLRWLEIGT*
Ga0078432_1221702	3300005785	Sediment	GSLALASLNRACRDHRPDFSATLTTMAFDHSSLR*
Ga0070766_103131353	3300005921	Soil	LLALVSLNRACQNHVLAIPPLTTIAFDNGSLRWLEIGT*
Ga0081455_1000896410	3300005937	Tabebuia Heterophylla Rhizosphere	QKLLFRFASLASLNRACRDRPGVSATLTTTALDRSSLRWLEIGS*
Ga0099795_100365801	3300007788	Vadose Zone Soil	FRSSLLALASLDLACRDHRPDFSATFTTIAFDDSSLQWLGSAT*
Ga0114948_101458914	3300009102	Deep Subsurface	GSLALASLNRACRDHRPDVSATLTTMAFDHSSLRWLGISP*
Ga0114948_107349682	3300009102	Deep Subsurface	FSGGSLALASLNRACRDHRPDVSATLTTMAFDHSSLR*
Ga0114948_108016722	3300009102	Deep Subsurface	ISGSLALASLNRACRDHRPDFSATLTTMAFDHSSLR*
Ga0114949_100259886	3300009139	Deep Subsurface	GSLALASLNRACQDHRPGFSATLTTAALYDSSLRWLGIGP*
Ga0099792_101967441	3300009143	Vadose Zone Soil	LHSHDLACRVLCPDVSATLTTTAFDRSSSWLGFSDLIAEPEG
Ga0099792_102555131	3300009143	Vadose Zone Soil	LAPLDLTCRVLCPGVSAALTTTAFDHSSSRWLGISDLIAEP*
Ga0099792_103962582	3300009143	Vadose Zone Soil	ASLDLACRDHRPDFSATFTTIAFDDSSLQWLGISDRIVSS*
Ga0114129_123181052	3300009147	Populus Rhizosphere	ALASLNRACRDLVRFSATLTTIAFGNRSLQRLEAST*
Ga0114971_100425024	3300009185	Freshwater Lake	ALASLNHACQTPWSGFSATFTTVAFDHSSLRWLEINN*
Ga0114925_105623292	3300009488	Deep Subsurface	LALASLNHACRDHRPDVSATLTTIALYNSSLRWLGIDP*
Ga0114925_109571331	3300009488	Deep Subsurface	SGSLALASLNRACRDHRPDFSAMLTTMAFDQSSLRWLGIST*
Ga0114920_108680811	3300009528	Deep Subsurface	SSGSLALASLNLACWDHRPSVSATLATIALYDSSLRWLGISP*
Ga0116102_10390232	3300009632	Peatland	LASLNRACRNHVPASATLTTIAFDNGSLRWLEIGT*
Ga0116118_10980301	3300009637	Peatland	SLNRACQNLCPDFSATFTTIAFDDSSLRWLEIST*
Ga0116110_10125085	3300009643	Peatland	LALASLNRACRNHVPASATLTTIAFDNGSLRWLEIGT*
Ga0116216_106442411	3300009698	Peatlands Soil	IDGLLALAFLDHACWDHHPGVSATLTTTALDRGSLRWLEIST*
Ga0126374_103131691	3300009792	Tropical Forest Soil	SLDLACWDHCPNVSATLTTTAFDHSSLRWLEIST*
Ga0126374_111422542	3300009792	Tropical Forest Soil	RLIRFRRFCSGSLALASLDLACRITVPTFSATLTTTAFDRSSLRRLGIGS*
Ga0099796_100201911	3300010159	Vadose Zone Soil	LLALASLDLACRDHCPDVSATLTTTAFDRSSSRWLGISDLIAEP
Ga0126370_101317972	3300010358	Tropical Forest Soil	LLALASLDLACRDHRPDFSATFTTIAFDDSSLQWLGISDLIA
Ga0126376_131029131	3300010359	Tropical Forest Soil	LASLDLACRNHRPGVSATLTTTAFDRSSSRWLGISA*
Ga0126372_122341482	3300010360	Tropical Forest Soil	NSGSLALASLNHPIEILFRLSATFTTVAFDHSSLRWFEIST*
Ga0126377_110855001	3300010362	Tropical Forest Soil	GSLALASLDRACRDHRPGVSATLTTTAFDRSSLRWLEIGT*
Ga0136449_1009241193	3300010379	Peatlands Soil	LLAFASLDHACRDHRPGVSATLTTTALSRRSWRWLEIST*
Ga0136449_1011688892	3300010379	Peatlands Soil	GSLALASLNRACQDHRPGVSATLTTTAFDRSGLRWLGIST*
Ga0134122_100069291	3300010400	Terrestrial Soil	LASLDHACRDHRPDVSATLTTTAVDRSSLRWLGIGS*
Ga0134123_101582362	3300010403	Terrestrial Soil	LLALASVYLACRDLVPGFSATLTTIAFGNRSLQWLEAST*
Ga0114947_100805381	3300011112	Deep Subsurface	HFSGGSLALASLNRACRDHRPDFSATLTTMAFDHSSLRQLGISS*
Ga0114947_101212324	3300011112	Deep Subsurface	RFISGSLALASLNRACRDHRPDFSATLTTMAFDHSSLR*
Ga0137393_105411071	3300011271	Vadose Zone Soil	SLDLACRDHRPGVSATLTTTTFNRSSLRWLEINT*
Ga0137389_114970382	3300012096	Vadose Zone Soil	FRSSLLALASLDLACRDHRPDFSATFTTMAFGRSSLRWLEINT*
Ga0137388_110746731	3300012189	Vadose Zone Soil	SLLALASLDLACRDHRPDFSATFTTIAFDDSSLQWLGISDRIVSS*
Ga0137381_112980772	3300012207	Vadose Zone Soil	GSLALASLNHACRDHRPDVSATLATMAFDHSSLRWLEINT*
Ga0137398_100947422	3300012683	Vadose Zone Soil	LLALASLDLACRDHRPDFSATFTTIAFDDSSLQWLGSAT*
Ga0181522_108567031	3300014657	Bog	LLALASLDLACRVLCPGVSATLTTTAFDRSSSRWLGISDLIAEPEG
Ga0157377_102675392	3300014745	Miscanthus Rhizosphere	SGSLALASLDLACRDHRPGVSATLTTTAFGRSGSR*
Ga0182033_105997042	3300016319	Soil	LAFLDRACRNLCLGVSATLTTTAFARSSLRWLEIGS
Ga0182033_113363171	3300016319	Soil	HRLIRFRHFCSGSLALASLDRACRNLCLGVSATLTTTAFARSSLRWLEIGS
Ga0182032_107162361	3300016357	Soil	ALASLDLACQNRRPGFSATLTTTTFNRSSLRWLEIST
Ga0182034_109070961	3300016371	Soil	IRFRDFCSGSLALASLDRACWNLVPAFPATLTTTAFDRSSLRWLEIST
Ga0182040_110434252	3300016387	Soil	IRFRHFCSGSLALASLDRALPGSCPDVSATFTTTAFDRSSLRWLEIGT
Ga0182037_116187471	3300016404	Soil	LLALASLDLACQNRRPGFSATLTTTTFNRSSLRWLEIST
Ga0187802_103533051	3300017822	Freshwater Sediment	LASPGRACQDHCPGVSVTLTTTAFDRSGSRWLGIST
Ga0187820_10918172	3300017924	Freshwater Sediment	LALASLDRTCRDHRPDVSATLTTTAFDHSSLRWLEIST
Ga0187805_103014402	3300018007	Freshwater Sediment	SFRRFCSGSLALASLDRTCRDHRPDVSATLTTTAFDHSSLRWLEINT
Ga0187864_104986032	3300018022	Peatland	LASLNRACQNLCPDFSATFTTVAFDDSSLRWLEINT
Ga0187867_102814202	3300018033	Peatland	ISGLLALASLNRACRNHVPASATLTTIAFDNGSLRWLEIST
Ga0187875_101416883	3300018035	Peatland	GLLALASLNRACQNLCPDFSATFTTIAFDDSSLRWLEIST
Ga0187862_105110762	3300018040	Peatland	LASLNRACQNLCPDFSATFTTIAFDDSSLRWLEIST
Ga0184632_104287622	3300018075	Groundwater Sediment	SLSLASLDHACRDHRPDFSATLTTTAFDRSSSRWLGISDLIAEPAE
Ga0184639_105429901	3300018082	Groundwater Sediment	LLALASLDLACRDHCPDVSATLTTTAFDRSSSRWLGISDLIAEPAE
Ga0187769_103579052	3300018086	Tropical Peatland	MRFRHFIGGLLALASLNLACRDHRPGVSATLTTTAFDRSSLRWLGIST
Ga0187774_107080411	3300018089	Tropical Peatland	LALASLNRACRDHRPGVSATLTTTAFDRSSLRWLGIGA
Ga0212167_11708293	3300020230	Sediment	IRFRRFISGSLALASLNRACRDHRPGFSATLTTMAFDHSSLR
Ga0212227_13680632	3300020234	Sediment	RFRRFISGSLALASLNRACRDHRPDFSATLTTMAFDHSSLR
Ga0210395_114042451	3300020582	Soil	LLALASLDLACRDHRPDFSATFTTIACDDSSLQWLGISDL
Ga0210402_107673992	3300021478	Soil	VKEVFRRFRSSLLALASLDLACPDHCPGVSATLTTTAFDRSGSRWLGISDLITHPKGLP
Ga0210410_116850972	3300021479	Soil	ALASLDLAYRDHRPGVSATLTTTTFNRSSLRWLGIST
Ga0126371_113669241	3300021560	Tropical Forest Soil	RLKGFRRFCSDALALASLDHACRDHRPGFSATLTTMCF
Ga0224503_101310252	3300022201	Sediment	FSSGSLALASLNRACRDHRPDFSATLTTMAFDHSSLR
Ga0242672_10417661	3300022720	Soil	DGLLALASLNRACRFFFRHSATLTTIAFDESSLRWLEIST
(restricted) Ga0233449_10147491	3300024302	Seawater	FSSGSLALASLNLACRGQCPDVSTTLTTIALYDSSL
Ga0209151_10179001	3300025643	Marine	SSGSLALASLNLACRGQCPDVSTTLTTIALYDSSL
Ga0209014_100222561	3300025857	Arctic Peat Soil	RLIAFRHFNSGSLALAFLNHACRTPWSGFSATFTTVAFDHSSLRWLEINN
Ga0209540_103169921	3300025888	Arctic Peat Soil	LASLNHACRTPWSGFSATFTTVAFDHSSLRWLEINN
Ga0207641_103635381	3300026088	Switchgrass Rhizosphere	FRRFRSGSLALASLDLACRDHRPGVSATLTTTAFGRSGSR
Ga0257157_10372762	3300026496	Soil	ALASLDLACWDHRPGVSATLTTTTFNRSSLRWLEIST
Ga0257161_11004531	3300026508	Soil	ALASLDRACRDHRPGVSATLTTTTFNRSSLRWLEIST
Ga0209734_10119152	3300027535	Forest Soil	RHFIDGSLALASLNHTYRNLCPDFSATFTTIAFDDSSLRWLEINT
Ga0209118_11427611	3300027674	Forest Soil	FIDGSLALASLNHTYRNLCPDFSATFTTMAFDHSSLRWLEINT
Ga0209797_103530562	3300027831	Wetland Sediment	LLALASLDRACRDHCPGVSATLTTTAFDRSSSRWLGISDLIAE
(restricted) Ga0255058_102866311	3300027872	Seawater	IRFRHFSSGSLALASLNHACRDHRPDFSATLTTMAFDHSSLRQLGISS
Ga0209465_100797091	3300027874	Tropical Forest Soil	IRFRRFCGGSLALASLDLACRDHCPDVSATLTTTAFDRSSLR
Ga0209488_100802871	3300027903	Vadose Zone Soil	DLACRDHRPDFSATFTTIAFDDSSLQWLGISDRIVSS
Ga0209382_104555282	3300027909	Populus Rhizosphere	FWHHLIAFRRFCSGSLALASLDHACRDHRPDVSATFTTIAFDNSSLRWLEIST
(restricted) Ga0255057_100219201	3300027997	Seawater	GGSLALASLNRACRDHRPDFSATLTTMAFDHSNLR
Ga0311329_109866022	3300029907	Bog	IDGLLALASLDLACRDHRPGVSATLTTTALDRSCLRWLEIGT
Ga0316363_101986751	3300030659	Peatlands Soil	FIDGLLSLASLDHACRDHRPGVSATLTTTALDRGSLRWLEIST
Ga0308194_103164221	3300031421	Soil	LTSSQRFRHFCDGSLALAYLNRACRDHRPDVSATLTTMAFDRSSLRWLGISDLI
Ga0318516_104204002	3300031543	Soil	SLALASLDRACRNLCLGVSATLTTTAFARSSLRWLEIGS
Ga0318528_104132392	3300031561	Soil	HFCSGSLALAFLDRACRNLCLGVSATLTTTAFARSSLRWLEIGS
Ga0318573_101086122	3300031564	Soil	LALAFLDRACRNLCLGVSATLTTTAFARSSLRWLEIGS
Ga0310915_100906771	3300031573	Soil	LALASLDRALPGSCPDVSATFTTTAFDRSSLRWLEIGT
Ga0310686_1059022171	3300031708	Soil	LIRFRRFRSSLLALASLDRACRDHCPDVSAMFTTIAFDDSSLRWFEINT
Ga0306917_110636882	3300031719	Soil	RRFCSGSLALASLDLACRDHCPDVSATLTTTPFDRSSLRWLGIGS
Ga0318493_101652681	3300031723	Soil	FCSGSLALASLDHACRDLCPDVSATLTTTAFDRSSLRWLEIGS
Ga0318554_101786153	3300031765	Soil	FCSGSLALASLDRACRNLCLGVSATLTTTAFARSSLRWLEIGS
Ga0306925_118738462	3300031890	Soil	IGGSLALASLNRACLDHRPGVSATLTTTAFDRSSLRWLGISA
Ga0306926_102975913	3300031954	Soil	RHFCSGSLALAFLDRACRNLCLGVSATLTTTAFARSSLRWLEIGS
Ga0306926_104794904	3300031954	Soil	LLSLASLDLACWDHRPGFSAALTTTVFNRSSLRWLEIGT
Ga0306926_105134753	3300031954	Soil	ALASLDRACRNLCPGVSATLTTTAFARSSLRWLEIGS
Ga0307479_104836691	3300031962	Hardwood Forest Soil	ALASLDLACRDHRPGVSATLTTTAFNRSSLRWLGIST
Ga0306924_126146902	3300032076	Soil	FCSGSLALASLDRAYRDHRPDVSATFTTTAFDRSSLRWLEIGT
Ga0311301_111645031	3300032160	Peatlands Soil	GLLALASLNRACRNHVPASATLTTIAFDNGSLRWLEIGT
Ga0306920_1001671841	3300032261	Soil	ASLNLACRDQVPTFSATLTTIALDDSSLRWLETCT
Ga0306920_1030117871	3300032261	Soil	RHFIGGSLALASLNRACQDHRPGVSATLTTTAFDCSSLRWLEIGT

Hidden Markov Model


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