NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F090690

Metagenome / Metatranscriptome Family F090690

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090690
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 55 residues
Representative Sequence KEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Number of Associated Samples 99
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.78 %
% of genes near scaffold ends (potentially truncated) 97.22 %
% of genes from short scaffolds (< 2000 bps) 96.30 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (96.296 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(10.185 % of family members)
Environment Ontology (ENVO) Unclassified
(29.630 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(43.519 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.00%    β-sheet: 0.00%    Coil/Unstructured: 85.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.24
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF01476LysM 38.89
PF07719TPR_2 4.63
PF13432TPR_16 1.85
PF05552TM_helix 1.85
PF01522Polysacc_deac_1 0.93
PF00691OmpA 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG0668Small-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 1.85
COG3264Small-conductance mechanosensitive channel MscKCell wall/membrane/envelope biogenesis [M] 1.85
COG0726Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 familyCell wall/membrane/envelope biogenesis [M] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.30 %
UnclassifiedrootN/A3.70 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003324|soilH2_10361250All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1222Open in IMG/M
3300003503|JGI26141J51220_1002662All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1091Open in IMG/M
3300004281|Ga0066397_10175233All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria505Open in IMG/M
3300005179|Ga0066684_10812329All Organisms → cellular organisms → Bacteria → Proteobacteria617Open in IMG/M
3300005183|Ga0068993_10283251All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium595Open in IMG/M
3300005332|Ga0066388_101592123All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1149Open in IMG/M
3300005332|Ga0066388_104951259All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium677Open in IMG/M
3300005332|Ga0066388_105862605All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium621Open in IMG/M
3300005335|Ga0070666_10231757All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1304Open in IMG/M
3300005343|Ga0070687_101349635All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium531Open in IMG/M
3300005345|Ga0070692_10852306All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium626Open in IMG/M
3300005439|Ga0070711_100443821All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1061Open in IMG/M
3300005445|Ga0070708_100385841All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1321Open in IMG/M
3300005457|Ga0070662_100098541All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2208Open in IMG/M
3300005536|Ga0070697_100372614All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1235Open in IMG/M
3300005546|Ga0070696_100491551All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria975Open in IMG/M
3300005546|Ga0070696_101847691All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium523Open in IMG/M
3300005547|Ga0070693_100092838All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1823Open in IMG/M
3300005557|Ga0066704_10645172All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium674Open in IMG/M
3300005577|Ga0068857_100777332All Organisms → cellular organisms → Bacteria → Proteobacteria913Open in IMG/M
3300005764|Ga0066903_101291783Not Available1362Open in IMG/M
3300006175|Ga0070712_101557979All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium578Open in IMG/M
3300006755|Ga0079222_12367103All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium531Open in IMG/M
3300006845|Ga0075421_100691274All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1187Open in IMG/M
3300006852|Ga0075433_10402820All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1207Open in IMG/M
3300006854|Ga0075425_101062748All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria923Open in IMG/M
3300006880|Ga0075429_100482534All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1086Open in IMG/M
3300006904|Ga0075424_102133764All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria590Open in IMG/M
3300006914|Ga0075436_100107821All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1943Open in IMG/M
3300006969|Ga0075419_11314150All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria537Open in IMG/M
3300009090|Ga0099827_10578399All Organisms → cellular organisms → Bacteria → Proteobacteria968Open in IMG/M
3300009100|Ga0075418_10282844All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1767Open in IMG/M
3300009148|Ga0105243_10160392All Organisms → cellular organisms → Bacteria1938Open in IMG/M
3300009162|Ga0075423_11297286All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria778Open in IMG/M
3300009162|Ga0075423_12032947All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium622Open in IMG/M
3300009177|Ga0105248_11309336All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria820Open in IMG/M
3300009177|Ga0105248_11860578All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria683Open in IMG/M
3300009296|Ga0103681_1215565All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria759Open in IMG/M
3300009678|Ga0105252_10393130All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria634Open in IMG/M
3300009795|Ga0105059_1051716All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium549Open in IMG/M
3300009804|Ga0105063_1050456All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium594Open in IMG/M
3300009814|Ga0105082_1119880All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium512Open in IMG/M
3300009837|Ga0105058_1046519All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria965Open in IMG/M
3300010047|Ga0126382_11986536Not Available553Open in IMG/M
3300010329|Ga0134111_10341525All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium631Open in IMG/M
3300010400|Ga0134122_12395691All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria575Open in IMG/M
3300011119|Ga0105246_11292648All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium676Open in IMG/M
3300011270|Ga0137391_10903081All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium723Open in IMG/M
3300011271|Ga0137393_10496518All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1047Open in IMG/M
3300011414|Ga0137442_1104066All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium619Open in IMG/M
3300011435|Ga0137426_1137946All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria709Open in IMG/M
3300012134|Ga0137330_1021943All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria783Open in IMG/M
3300012202|Ga0137363_11759634All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium512Open in IMG/M
3300012351|Ga0137386_11067552All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium571Open in IMG/M
3300012929|Ga0137404_10663183All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium941Open in IMG/M
3300012971|Ga0126369_12874602Not Available564Open in IMG/M
3300014325|Ga0163163_10952470All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria922Open in IMG/M
3300014968|Ga0157379_11112149All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria757Open in IMG/M
3300015245|Ga0137409_11460588All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria531Open in IMG/M
3300015258|Ga0180093_1095859All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium723Open in IMG/M
3300015264|Ga0137403_10622566All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium943Open in IMG/M
3300015371|Ga0132258_11192437All Organisms → cellular organisms → Bacteria → Proteobacteria1925Open in IMG/M
3300018054|Ga0184621_10062644All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1265Open in IMG/M
3300018054|Ga0184621_10336380All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria531Open in IMG/M
3300018063|Ga0184637_10693243All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria558Open in IMG/M
3300018076|Ga0184609_10164717All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1024Open in IMG/M
3300018422|Ga0190265_10466930All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1370Open in IMG/M
3300019487|Ga0187893_10165995All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1762Open in IMG/M
3300019487|Ga0187893_10844829All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium552Open in IMG/M
3300019870|Ga0193746_1027299All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria587Open in IMG/M
3300019883|Ga0193725_1019145All Organisms → cellular organisms → Bacteria → Proteobacteria1878Open in IMG/M
3300020581|Ga0210399_10115553All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2202Open in IMG/M
3300021432|Ga0210384_11885167All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria503Open in IMG/M
3300021560|Ga0126371_10701713All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1160Open in IMG/M
3300025322|Ga0209641_10227595All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1392Open in IMG/M
3300025580|Ga0210138_1189056All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium505Open in IMG/M
3300025910|Ga0207684_10674102All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria880Open in IMG/M
3300025916|Ga0207663_11719067All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria505Open in IMG/M
3300025932|Ga0207690_11297398All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria608Open in IMG/M
3300025935|Ga0207709_10972734All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria693Open in IMG/M
3300025937|Ga0207669_11499685All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium575Open in IMG/M
3300025957|Ga0210089_1037046All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300026088|Ga0207641_10330070All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1449Open in IMG/M
3300026297|Ga0209237_1026600All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria3215Open in IMG/M
3300026316|Ga0209155_1276126All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria521Open in IMG/M
3300026475|Ga0257147_1033031All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria748Open in IMG/M
3300026532|Ga0209160_1219314All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium672Open in IMG/M
3300027122|Ga0207538_1003680All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria816Open in IMG/M
3300027577|Ga0209874_1119488All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria615Open in IMG/M
3300027874|Ga0209465_10550652All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium574Open in IMG/M
3300027909|Ga0209382_10609770All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1187Open in IMG/M
(restricted) 3300027995|Ga0233418_10172010All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium700Open in IMG/M
3300028381|Ga0268264_11258681All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria750Open in IMG/M
3300028884|Ga0307308_10494254All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium587Open in IMG/M
(restricted) 3300031150|Ga0255311_1030682All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1121Open in IMG/M
3300031538|Ga0310888_10314325All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300031720|Ga0307469_11202783All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria716Open in IMG/M
3300031740|Ga0307468_100308151All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1154Open in IMG/M
3300031820|Ga0307473_11142721All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria576Open in IMG/M
3300031820|Ga0307473_11490814All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria512Open in IMG/M
3300031854|Ga0310904_11031210All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium587Open in IMG/M
3300031854|Ga0310904_11209406All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria545Open in IMG/M
3300031890|Ga0306925_10064898All Organisms → cellular organisms → Bacteria3836Open in IMG/M
3300031962|Ga0307479_11326337All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium680Open in IMG/M
3300032180|Ga0307471_100612792All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1248Open in IMG/M
3300032205|Ga0307472_102453178Not Available530Open in IMG/M
3300032783|Ga0335079_11948496All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium567Open in IMG/M
3300034354|Ga0364943_0423522All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria517Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.19%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere9.26%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.41%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil6.48%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil5.56%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil4.63%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand4.63%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.70%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.78%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.78%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.85%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.93%
GroundwaterEnvironmental → Aquatic → Freshwater → Drinking Water → Chlorinated → Groundwater0.93%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.93%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.93%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.93%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.93%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.93%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.93%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300003503Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AMHost-AssociatedOpen in IMG/M
3300004281Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBioEnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005183Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009296Microbial communities from groundwater in Rifle, Colorado, USA-3A_0.2umEnvironmentalOpen in IMG/M
3300009678Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100EnvironmentalOpen in IMG/M
3300009795Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50EnvironmentalOpen in IMG/M
3300009804Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40EnvironmentalOpen in IMG/M
3300009814Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60EnvironmentalOpen in IMG/M
3300009837Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011414Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2EnvironmentalOpen in IMG/M
3300011435Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2EnvironmentalOpen in IMG/M
3300012134Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT142_2EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015258Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1DaEnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300019870Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025322Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025580Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025957Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026475Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-AEnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300027122Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027577Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027995 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_1_MGEnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300034354Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
soilH2_1036125013300003324Sugarcane Root And Bulk SoilGSQDDTVVQWTREAGYTAAFTVRPQANPSFVEPLRIHRTQIFSEMSLDDFTRYLNIYNSEKLR*
JGI26141J51220_100266213300003503Arabidopsis Thaliana RhizosphereAAFSVRRQGNASFVRPLTGHRSQIYSEMTLDDFVRNLNVFQEENLR*
Ga0066397_1017523323300004281Tropical Forest SoilAFTVRRQGSPAFVSPLRGHRSQIYSEMTLEDFIKNLNVFATEELK*
Ga0066684_1081232923300005179SoilKKVREHGYIAAFSVRREGNASFVPPLRIHRSQIYSEMTIEEFAKSLDVFQKEAFQ*
Ga0068993_1028325113300005183Natural And Restored WetlandsFTVRRQGNPSFVEPLRIHRSQIYSEMSLDDFIKNLNFYNTESLK*
Ga0066388_10159212313300005332Tropical Forest SoilPYGRWDEELLKKVKEAGYVAAFTVRRQGNASFVFPLRGHRSQIYSEMSMEDFARNLNVYQQEDLR*
Ga0066388_10495125923300005332Tropical Forest SoilEYGYAAGFSVRRQGNASFIRPLTGNRSQVYSEMTMEDFAKNLNVYQEETLK*
Ga0066388_10586260513300005332Tropical Forest SoilTKERGYAAAFTVRRQGNPSFVQPLRIHRSQIYSEMNMDDFIKNLNFYNTESLK*
Ga0070666_1023175723300005335Switchgrass RhizosphereEEGLLPKVQQYGYVAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVYQEENLR
Ga0070687_10134963523300005343Switchgrass RhizosphereRWEEGLLPKVKEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0070692_1085230613300005345Corn, Switchgrass And Miscanthus RhizosphereDVVRKTKEYGYIAAFTVRRQGSPAFVSPLRGHRSQIYSEMTLEDFIKNLNVFATEELK*
Ga0070711_10044382113300005439Corn, Switchgrass And Miscanthus RhizosphereGLLPKVKEYGYIAAFSVGRECITTYVRPLAAHRSQIYAEMTLDDFVKNLNVFQEENLR*
Ga0070708_10038584113300005445Corn, Switchgrass And Miscanthus RhizosphereSLLGKAIEHGYVAGFSVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQRESLVEPAK*
Ga0070662_10009854113300005457Corn RhizosphereAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVYQEENLR*
Ga0070697_10037261423300005536Corn, Switchgrass And Miscanthus RhizosphereKVKEYGYVAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0070696_10049155123300005546Corn, Switchgrass And Miscanthus RhizosphereSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEESLR*
Ga0070696_10184769123300005546Corn, Switchgrass And Miscanthus RhizosphereAFTVRRESNASFVRPLEINRSQIYSEMTLEQFAKNLNLFHQENLR*
Ga0070693_10009283833300005547Corn, Switchgrass And Miscanthus RhizosphereEEGLLPKVKEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0066704_1064517223300005557SoilESLLSKLAEYGYVAGFSVRRQGNASFVRPFVGNRSQIYSEMTLEDFVKNLNVYQQEDLK*
Ga0068857_10077733223300005577Corn RhizosphereDVVRAVRENGYAAAFTVRREGNPSFVAPLRGHRSQIYGEMTLQDFIKNLEVRHEEKLVD*
Ga0066903_10129178313300005764Tropical Forest SoilSLLSRLAEYGYTTGFSVRRQGNASFVRPLAANRSQIYSEMTMDDFIKNLNVYQEESLK*
Ga0070712_10155797923300006175Corn, Switchgrass And Miscanthus RhizosphereYPYGRWEEGLLPKVKEYGYIAAFSVRRQGNASFVRPLAAHRSQIYAEMTLDDFVKNLNVFQEENLR*
Ga0079222_1236710323300006755Agricultural SoilYGYIAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0075421_10069127423300006845Populus RhizosphereAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0075433_1040282023300006852Populus RhizosphereRGYVAALTVRRQGNPSFVEPLRIHRSQIYSEMSLDDFIKNLNFYNTESLK*
Ga0075425_10106274823300006854Populus RhizosphereRTKERGYVAALTVRRQGNPSFVEPLRIHRSQIYSEMSLDDFIKNLNFYNTESLK*
Ga0075429_10048253423300006880Populus RhizosphereYGYIAAFTVRRQGSPAFVFPLRGHRSQIYSEMTLEDFVKNLDVFAAEELK*
Ga0075424_10213376413300006904Populus RhizosphereKVAEHGYAAGFSVRRQGNASFARPLAGSRSQIYSEMTLEDFVKNLNLYQQENLK*
Ga0075436_10010782133300006914Populus RhizosphereLPKVQQYGYVAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0075419_1131415013300006969Populus RhizosphereKVQQYGYIAAFSVRRQGNAKNVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0099827_1057839923300009090Vadose Zone SoilVKKVREHGYIAAFSVRREGNASFVHPLRIHRSQIYSDMTIEEFAKSLDVFQKEAFQ*
Ga0075418_1028284433300009100Populus RhizosphereGYIAAFTVRRQGSPAFVSPLRGHRSQIYSEMTLEDFIKNLNVFATEELK*
Ga0105243_1016039213300009148Miscanthus RhizosphereGYVAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVYQEENLR*
Ga0075423_1129728613300009162Populus RhizosphereIIAYPYGSWDESLLGQIAEYGYVNDFSVSRQGNASLVRPLASKPSQIYSEMTMDDFIKNLNVYQEESLK*
Ga0075423_1203294723300009162Populus RhizosphereLPKVKEYGYIAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0105248_1130933623300009177Switchgrass RhizosphereFTVRPQANPSFVEPLRIHRTQIFSEMSLDDFTKYLNIFNSEKLQ*
Ga0105248_1186057823300009177Switchgrass RhizosphereFPYGSWDESLLGKAIEHGYVAGFSVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQRESLVEPAK*
Ga0103681_121556513300009296GroundwaterSVRRQGNPSFIHPIKINRSQIYSEMSLSEFIKNLNVFSQEAIQ*
Ga0105252_1039313023300009678SoilKEFGYTAAFTVRRQGSPAFVSPLRGHRSQIYSEMTLEDFVKNLDVFASEELK*
Ga0105059_105171623300009795Groundwater SandGLLPKVKEYGYVAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0105063_105045613300009804Groundwater SandGYVAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0105082_111988013300009814Groundwater SandAAALDVRRQGNPSFGLPVTLHRSQIYSEMSLQDFAKNLNVFNQEVVK*
Ga0105058_104651923300009837Groundwater SandALDVRRQGNPSFGLPLTLHRSQIYSEMSLQDFAKNLNVFNQEVVK*
Ga0126382_1198653623300010047Tropical Forest SoilAEYGYTAGFSVRRQGNASFVRPLAANRSQIYSEMTMDDFIKNLNVYQEESLK*
Ga0134111_1034152523300010329Grasslands SoilMAGFSVRRQGNAAFVRPLAGNRSQIYSEMTLEYLVKNLNDYPQESLK*
Ga0134122_1239569123300010400Terrestrial SoilVAGFSVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQRESLVEPAK*
Ga0105246_1129264813300011119Miscanthus RhizosphereDVVKKAKEYGYIAAFTVRRQGSPAFVSPLRGHRSQIYSEMTLEDFVKNLDVFAAEELK*
Ga0137391_1090308123300011270Vadose Zone SoilLGEYGYLAGFSVRRQGNASFVRPLAGNRSQIYSEMTLEDFVKNLNVYQQESLK*
Ga0137393_1049651813300011271Vadose Zone SoilGYVAAFTVLRQGNPSFVESLRIHRSQIYSEMSLEDFIKNLNFYNTESLK*
Ga0137442_110406613300011414SoilPYGRWEEGLLPKVKEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0137426_113794623300011435SoilSVRRQGNGSFIRPLAGNRSQIYSEMTLDDFAKNLNVYQRESLVEPAK*
Ga0137330_102194323300012134SoilGRWEEGLLPKVKEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0137363_1175963413300012202Vadose Zone SoilPKVKEYGYIAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0137386_1106755223300012351Vadose Zone SoilGYVAGFSVRRQGNASFVRPLAGNRSQIYSEMTLEDFVKNLNVYQQESLK*
Ga0137404_1066318313300012929Vadose Zone SoilRLLANSSMVMHGYIAAFSVRREGNASFVPPLRIHRSQIYSEMTIEEFAKSLDVFQKEAFQ
Ga0126369_1287460223300012971Tropical Forest SoilYGYTAGFSVRRQGNASFVRPLAANRSQIYSEMTMDDFIKNLNVYQEESLK*
Ga0163163_1095247023300014325Switchgrass RhizosphereWEEGLLPKVQQYGYVAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVYQEENLR*
Ga0157379_1111214913300014968Switchgrass RhizosphereYGRWEEGLLPKVKEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0137409_1146058813300015245Vadose Zone SoilAFPYGSWDESLLGKASEHGYVAGFSVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQQESLVEPAK*
Ga0180093_109585923300015258SoilRQDDEVVKKAKEFGYTAAFTVRRQGSPAFVSPLRGHRSQIYSEMTLEDFVKNLDVFASEELK*
Ga0137403_1062256623300015264Vadose Zone SoilVKKVREHGYIAAFSVRREGNASFVPPLRIHRSQIYSEMTIEEFAKSLDVFQKEAFQ*
Ga0132258_1119243733300015371Arabidopsis RhizosphereLPKVKEHGYIAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0184621_1006264433300018054Groundwater SedimentVKEYGYSAAFSVRRQGNASFVRSLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0184621_1033638023300018054Groundwater SedimentGRWEEGLLPKVKEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0184637_1069324313300018063Groundwater SedimentIIAFPYGSWDESLLGKAIEHGYVAGFSVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQQESLVEPAK
Ga0184609_1016471723300018076Groundwater SedimentAAFSVRRQGNASFVRSLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0190265_1046693013300018422SoilVVKKAKEYGYIAAFTVRRQGSPAFVSPLRGHRSQIYSEMTLEDFIKNLNVFAAEELK
Ga0187893_1016599533300019487Microbial Mat On RocksAGFTVRRQGNASFVRPLVANRSQIYSEMTLEEFIKNLNVFQPESLK
Ga0187893_1084482913300019487Microbial Mat On RocksKEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0193746_102729913300019870SoilAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0193725_101914533300019883SoilYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0210399_1011555343300020581SoilVKEYGYIAAFSVRRQGNASFVRSLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0210384_1188516713300021432SoilLAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0126371_1070171323300021560Tropical Forest SoilYGYIAGFSVRRQGNASFVRPLAANRSQFYSEMSLDDFVKNLNVYQEESLK
Ga0209641_1022759523300025322SoilREFGYEAAFTVRREGNPAFVAPFSAHRSQIYSDMTLEEFTKTLNVFSPEHLQ
Ga0210138_118905623300025580Natural And Restored WetlandsYVAAFTVRRQGNPSFVEPLRIHRSQIYSEMSLDDFIKNLNFYNTESLK
Ga0207684_1067410213300025910Corn, Switchgrass And Miscanthus RhizosphereYGSWDESLLGKAIEHGYVAGFSVRRQGNGSFIRMLAGNRSQIYSEMTLDDFAKNLNVYQRESLVEPAQ
Ga0207663_1171906713300025916Corn, Switchgrass And Miscanthus RhizosphereGYIAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0207690_1129739813300025932Corn RhizosphereIEHGYVAGFSVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQRESLVEPAK
Ga0207709_1097273413300025935Miscanthus RhizosphereQYGYVAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVYQEENLR
Ga0207669_1149968513300025937Miscanthus RhizosphereYIAALDVRRQGNPSFTPTLTIHRAQVYSEMTLDDFIRNLTVFSEETIR
Ga0210089_103704623300025957Natural And Restored WetlandsGYVAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0207641_1033007013300026088Switchgrass RhizosphereLGKAIEHGYVAGFSVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQRESLVEPAK
Ga0209237_102660043300026297Grasslands SoilEHGYIAAFSVRREGNASFVPPLRIHRSQIYSEMTIEEFAKSLDVFQKEAFQ
Ga0209155_127612623300026316SoilPIVAYPYGSWDESLLSKLAEYGYVAGFSVRRQGNASFVRRLVGNRSQIYSEMTLEDFVKNLNVYQQQDLK
Ga0257147_103303123300026475SoilFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0209160_121931413300026532SoilESLLSKLAEYGYVAGFSVRRQGNASFVRPFVGNRSQIYSEMTLEDFVKNLNVYQQEDLK
Ga0207538_100368013300027122SoilGLLPKVTEHGYIAAFSVRRQGNASFVRPLTGHRSQIYSEMTLDDFVRNLNVFQEENLR
Ga0209874_111948813300027577Groundwater SandALDVRRQGNPSFGLPLTLHRSQIYSEMSLQDFAKNLNVFNQEVVK
Ga0209465_1055065213300027874Tropical Forest SoilVLAKAGEAGYVAGFSVRRQGDAAFVRPLAGTRSQIYSEMTMEDFEKNLNVFQPENLK
Ga0209382_1060977013300027909Populus RhizosphereAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
(restricted) Ga0233418_1017201023300027995SedimentVKEYGYIAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVRNLNVFQEENLR
Ga0268264_1125868123300028381Switchgrass RhizosphereRRADIIAFPYGSWDESLLGKAIEHGYVAGFSVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQRESLVEPAK
Ga0307308_1049425413300028884SoilPKVKEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
(restricted) Ga0255311_103068213300031150Sandy SoilLPKVKEYGYIAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0310888_1031432513300031538SoilEGLLPRVKEHGYVAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0307469_1120278313300031720Hardwood Forest SoilEGLLPKVKEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0307468_10030815113300031740Hardwood Forest SoilGYIAAFSVRRQGNASFVRPLAAHRSQIYAEMTLDDFVKNLNVFQEENLR
Ga0307473_1114272123300031820Hardwood Forest SoilGAPRRIIAFPYGSWDEAVLSKLGEYGYSAAFSVRRQGNSSFIRPLAGNRSQVYSEMSMEDFIKNLNVYQQESLK
Ga0307473_1149081413300031820Hardwood Forest SoilGYIAAFSVRRQCNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0310904_1103121023300031854SoilAYPYGRWEEGLLPKVTEHGYIAAFSVRRQGNATFVRPLTGHRSQIYSEMTLDDFVRNLNVFQEENLR
Ga0310904_1120940613300031854SoilKEYGYIAAFTVRRQGSPAFVSPLRGHRSQIYSEMTLEDFVKNLNVFAAEELK
Ga0306925_1006489843300031890SoilLDVRRQGNPSFAQLLAIHRSQIYSEMTLEDFAKNLNTFNQEVIK
Ga0307479_1132633723300031962Hardwood Forest SoilYGYIAAFSVRRQGNASFVRSLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0307471_10061279213300032180Hardwood Forest SoilPYGRWEEGLLPKVKEYGYIAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0307472_10245317813300032205Hardwood Forest SoilAGFTVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQQEPLVEAAK
Ga0335079_1194849613300032783SoilVLQRTKERGYVAAFTVRRQGNPSFVQPLRIHRSQIYSEMTLEDFIKNLNFYNTESLK
Ga0364943_0423522_2_1753300034354SedimentVLGKAGEYGYMAGFSVRRQGNASFIRPLAGSRSQIYSEMTLDDFVKNLNVFQEENLR


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