Metagenome / Metatranscriptome Family F089762

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089762
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	68 residues
Representative Sequence	MVQTYSSLLEYEIGRLIDEAIADEIAILANGNVDDIKDYKFRVGIIRGLQKARELMSEADHNIQSGERG
Number of Associated Samples	89
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	9.17 %
% of genes near scaffold ends (potentially truncated)	41.67 %
% of genes from short scaffolds (< 2000 bps)	76.85 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.370 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (59.259 % of family members)
Environment Ontology (ENVO)	Unclassified (94.444 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (96.296 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 82.61% β-sheet: 0.00% Coil/Unstructured: 17.39%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00166	Cpn10	62.96

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	62.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
All Organisms	root	All Organisms	29.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Viruses	superkingdom	All Organisms → Viruses	15.74 %
cellular organisms	root	All Organisms → cellular organisms	13.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	13.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.04 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.26 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.56 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.04 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.56 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.04 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	4.63 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.04 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	4.63 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.04 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	4.63 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.04 %
Rhizobium lusitanum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium lusitanum	4.63 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c016710	Not Available	1173	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1019299	All Organisms → cellular organisms → Bacteria	3206	Open in IMG/M
3300000553\|TBL_comb47_HYPODRAFT_10053140	Not Available	2435	Open in IMG/M
3300002091\|JGI24028J26656_1003435	All Organisms → cellular organisms → Bacteria	2663	Open in IMG/M
3300002092\|JGI24218J26658_1005227	Not Available	2643	Open in IMG/M
3300002933\|G310J44882_10066164	Not Available	783	Open in IMG/M
3300003375\|JGI26470J50227_1002398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6058	Open in IMG/M
3300003375\|JGI26470J50227_1026117	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300003375\|JGI26470J50227_1053054	Not Available	700	Open in IMG/M
3300003375\|JGI26470J50227_1078723	Not Available	512	Open in IMG/M
3300003787\|Ga0007811_1006894	All Organisms → Viruses → Predicted Viral	1185	Open in IMG/M
3300003789\|Ga0007835_1007446	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300003795\|Ga0007853_1004134	Not Available	1023	Open in IMG/M
3300003795\|Ga0007853_1004727	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	940	Open in IMG/M
3300003798\|Ga0007842_1002714	Not Available	1408	Open in IMG/M
3300003800\|Ga0007860_1015239	Not Available	527	Open in IMG/M
3300003812\|Ga0007861_1006563	Not Available	1127	Open in IMG/M
3300003813\|Ga0007879_1015753	Not Available	806	Open in IMG/M
3300003813\|Ga0007879_1028606	Not Available	546	Open in IMG/M
3300003814\|Ga0007877_1021409	Not Available	707	Open in IMG/M
3300003943\|Ga0007808_1003640	Not Available	719	Open in IMG/M
3300004460\|Ga0066222_1233699	Not Available	737	Open in IMG/M
3300004685\|Ga0065177_1051228	Not Available	775	Open in IMG/M
3300004686\|Ga0065173_1006058	Not Available	2251	Open in IMG/M
3300004692\|Ga0065171_1068168	Not Available	563	Open in IMG/M
3300004770\|Ga0007804_1001670	Not Available	7654	Open in IMG/M
3300004771\|Ga0007797_1080897	Not Available	853	Open in IMG/M
3300004771\|Ga0007797_1113431	Not Available	700	Open in IMG/M
3300004773\|Ga0007795_10130850	Not Available	715	Open in IMG/M
3300004804\|Ga0007796_10039670	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1590	Open in IMG/M
3300004804\|Ga0007796_10114470	Not Available	826	Open in IMG/M
3300004807\|Ga0007809_10170304	Not Available	636	Open in IMG/M
3300006103\|Ga0007813_1067547	Not Available	715	Open in IMG/M
3300006106\|Ga0007833_1030106	All Organisms → Viruses → Predicted Viral	1028	Open in IMG/M
3300006113\|Ga0007858_1005351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium lusitanum	3277	Open in IMG/M
3300006119\|Ga0007866_1090439	Not Available	564	Open in IMG/M
3300006123\|Ga0007852_1011241	All Organisms → Viruses → Predicted Viral	2147	Open in IMG/M
3300009151\|Ga0114962_10468227	Not Available	671	Open in IMG/M
3300009155\|Ga0114968_10030520	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3614	Open in IMG/M
3300009182\|Ga0114959_10005666	Not Available	9278	Open in IMG/M
3300010157\|Ga0114964_10017231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium lusitanum	4200	Open in IMG/M
3300012694\|Ga0157559_1112073	Not Available	1828	Open in IMG/M
3300012696\|Ga0157579_1026926	Not Available	574	Open in IMG/M
3300012750\|Ga0157568_1109316	Not Available	1785	Open in IMG/M
3300013068\|Ga0157563_1027043	Not Available	1566	Open in IMG/M
3300013093\|Ga0164296_1052118	All Organisms → Viruses → Predicted Viral	1959	Open in IMG/M
3300013094\|Ga0164297_10054759	All Organisms → Viruses → Predicted Viral	1915	Open in IMG/M
3300013285\|Ga0136642_1026994	Not Available	1650	Open in IMG/M
3300013286\|Ga0136641_1127204	Not Available	697	Open in IMG/M
3300020686\|Ga0214194_102455	All Organisms → cellular organisms → Bacteria → Proteobacteria	1923	Open in IMG/M
3300020688\|Ga0214239_114469	Not Available	754	Open in IMG/M
3300020698\|Ga0214241_1008503	All Organisms → Viruses → Predicted Viral	1128	Open in IMG/M
3300020705\|Ga0214177_1010285	All Organisms → Viruses → Predicted Viral	1181	Open in IMG/M
3300020705\|Ga0214177_1028726	Not Available	607	Open in IMG/M
3300020724\|Ga0214244_1003330	Not Available	2884	Open in IMG/M
3300020727\|Ga0214246_1000739	All Organisms → cellular organisms → Bacteria → Proteobacteria	8369	Open in IMG/M
3300020732\|Ga0214201_1024372	All Organisms → cellular organisms → Bacteria → Proteobacteria	1052	Open in IMG/M
3300020733\|Ga0214172_1026912	Not Available	892	Open in IMG/M
3300020735\|Ga0214219_1033915	Not Available	778	Open in IMG/M
3300020735\|Ga0214219_1046316	Not Available	636	Open in IMG/M
3300021126\|Ga0214187_1004186	Not Available	2131	Open in IMG/M
3300021127\|Ga0214193_1000914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium lusitanum	5919	Open in IMG/M
3300021127\|Ga0214193_1015905	Not Available	959	Open in IMG/M
3300021131\|Ga0214206_1013043	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300021142\|Ga0214192_1076008	Not Available	968	Open in IMG/M
3300023179\|Ga0214923_10426695	Not Available	672	Open in IMG/M
3300025328\|Ga0208384_101486	Not Available	1103	Open in IMG/M
3300025328\|Ga0208384_108479	Not Available	539	Open in IMG/M
3300025330\|Ga0208615_102620	Not Available	756	Open in IMG/M
3300025337\|Ga0208252_114348	Not Available	503	Open in IMG/M
3300025338\|Ga0208501_100101	Not Available	3571	Open in IMG/M
3300025346\|Ga0208737_1001355	All Organisms → Viruses → Predicted Viral	1313	Open in IMG/M
3300025353\|Ga0208255_105225	All Organisms → Viruses → Predicted Viral	1295	Open in IMG/M
3300025358\|Ga0208504_1012490	All Organisms → Viruses → Predicted Viral	1212	Open in IMG/M
3300025363\|Ga0208385_1008646	Not Available	1366	Open in IMG/M
3300025363\|Ga0208385_1014134	Not Available	995	Open in IMG/M
3300025366\|Ga0208505_1001637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium lusitanum	3903	Open in IMG/M
3300025366\|Ga0208505_1034514	Not Available	654	Open in IMG/M
3300025367\|Ga0208108_1030820	Not Available	585	Open in IMG/M
3300025368\|Ga0208620_1030313	Not Available	560	Open in IMG/M
3300025369\|Ga0208382_1008047	Not Available	1807	Open in IMG/M
3300025372\|Ga0207957_1002244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium lusitanum	3695	Open in IMG/M
3300025372\|Ga0207957_1038333	Not Available	513	Open in IMG/M
3300025379\|Ga0208738_1002976	All Organisms → Viruses → Predicted Viral	3455	Open in IMG/M
3300025382\|Ga0208256_1002671	Not Available	3322	Open in IMG/M
3300025385\|Ga0207956_1040250	Not Available	592	Open in IMG/M
3300025392\|Ga0208380_1037751	Not Available	735	Open in IMG/M
3300025392\|Ga0208380_1049550	Not Available	611	Open in IMG/M
3300025399\|Ga0208107_1004360	Not Available	2101	Open in IMG/M
3300025413\|Ga0208614_1017158	Not Available	1218	Open in IMG/M
3300025420\|Ga0208111_1011605	All Organisms → Viruses → Predicted Viral	1620	Open in IMG/M
3300025426\|Ga0208739_1043814	Not Available	737	Open in IMG/M
3300025428\|Ga0208506_1021396	All Organisms → Viruses → Predicted Viral	1195	Open in IMG/M
3300025470\|Ga0208389_1091665	Not Available	532	Open in IMG/M
3300025598\|Ga0208379_1050107	Not Available	1087	Open in IMG/M
3300025606\|Ga0207954_1071145	Not Available	902	Open in IMG/M
3300025606\|Ga0207954_1085339	Not Available	799	Open in IMG/M
3300025782\|Ga0208867_1008571	Not Available	1703	Open in IMG/M
3300025782\|Ga0208867_1024727	Not Available	901	Open in IMG/M
3300025789\|Ga0208499_1059861	Not Available	585	Open in IMG/M
3300027741\|Ga0209085_1031609	Not Available	2508	Open in IMG/M
3300027741\|Ga0209085_1333381	Not Available	567	Open in IMG/M
3300027754\|Ga0209596_1067949	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1781	Open in IMG/M
3300027777\|Ga0209829_10056114	Not Available	2058	Open in IMG/M
3300027896\|Ga0209777_10241731	All Organisms → cellular organisms → Bacteria → Proteobacteria	1425	Open in IMG/M
3300027896\|Ga0209777_10796133	Not Available	664	Open in IMG/M
3300028392\|Ga0304729_1000964	Not Available	19725	Open in IMG/M
3300032117\|Ga0316218_1218081	Not Available	676	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	99.07%
Marine	Environmental → Aquatic → Marine	0.93%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	82.41%
Lake	Environmental → Aquatic → Freshwater → Lake	16.67%
Coastal	Environmental → Aquatic → Marine → Coastal	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	61.11%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	16.67%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	11.11%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	8.33%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.85%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	59.26%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	11.11%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	8.33%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	8.33%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.48%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	1.85%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.85%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.85%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300000553	Trout Bog Lake May 28 2007 Hypolimnion (Trout Bog Lake Combined Assembly 47 Hypolimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002933	Combined Assembly of freshwater hypolimnion microbial communities from Trout Bog Lake, Wisconsin, USA	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003789	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08	Environmental	Open in IMG/M
3300003795	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH11Jul08	Environmental	Open in IMG/M
3300003798	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07	Environmental	Open in IMG/M
3300003800	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jul08	Environmental	Open in IMG/M
3300003812	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08	Environmental	Open in IMG/M
3300003813	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09	Environmental	Open in IMG/M
3300003814	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09	Environmental	Open in IMG/M
3300003943	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Aug07	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004685	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul08 (version 2)	Environmental	Open in IMG/M
3300004686	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (version 2)	Environmental	Open in IMG/M
3300004692	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (version 2)	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004771	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA2.5M	Environmental	Open in IMG/M
3300004773	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA1M	Environmental	Open in IMG/M
3300004804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300006103	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09	Environmental	Open in IMG/M
3300006106	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07	Environmental	Open in IMG/M
3300006113	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Aug08	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006123	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH28Sep08	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300012694	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES054 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012696	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES083 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012750	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES069 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013068	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES062 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013094	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaG	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300013286	Freshwater microbial communities from Elizabeth Lake, Yosemite National Park, California, USA - 13020-23Y	Environmental	Open in IMG/M
3300020686	Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 epilimnion	Environmental	Open in IMG/M
3300020688	Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 hypolimnion	Environmental	Open in IMG/M
3300020698	Freshwater microbial communities from Trout Bog Lake, WI - 25AUG2008 hypolimnion	Environmental	Open in IMG/M
3300020705	Freshwater microbial communities from Trout Bog Lake, WI - 27AUG2007 epilimnion	Environmental	Open in IMG/M
3300020724	Freshwater microbial communities from Trout Bog Lake, WI - 04OCT2008 hypolimnion	Environmental	Open in IMG/M
3300020727	Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 hypolimnion	Environmental	Open in IMG/M
3300020732	Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 epilimnion	Environmental	Open in IMG/M
3300020733	Freshwater microbial communities from Trout Bog Lake, WI - 12JUL2007 epilimnion	Environmental	Open in IMG/M
3300020735	Freshwater microbial communities from Trout Bog Lake, WI - 25JUL2007 hypolimnion	Environmental	Open in IMG/M
3300021126	Freshwater microbial communities from Trout Bog Lake, WI - 24JUN2008 epilimnion	Environmental	Open in IMG/M
3300021127	Freshwater microbial communities from Trout Bog Lake, WI - 05AUG2008 epilimnion	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300025328	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025330	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE12Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025337	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025338	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE09Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025346	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025353	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH06Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025358	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025363	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH11Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025366	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025367	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE22May08 (SPAdes)	Environmental	Open in IMG/M
3300025368	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025369	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025382	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025385	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025392	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025399	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025413	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025420	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Aug08 (SPAdes)	Environmental	Open in IMG/M
3300025426	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025428	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH29Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025470	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025598	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025606	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M (SPAdes)	Environmental	Open in IMG/M
3300025782	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025789	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09 (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300028392	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)	Environmental	Open in IMG/M
3300032117	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0167102	3300000176	Freshwater	MYKCRMKQTYSTFLEYEIGRLIDEAVADEVSVLANGNIDKIEDYKTRVGIIKGLQKAKDLMLEADRNIQSGERG*
TBL_comb48_EPIDRAFT_10192992	3300000439	Freshwater	MPCGVYIYRMVQTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKFRVGMIRGLQRAKELMSEADRIIQTGERG*
TBL_comb47_HYPODRAFT_100531403	3300000553	Freshwater	MVQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARKLMSEADSNIQSGERG*
JGI24028J26656_10034352	3300002091	Lentic	MVQTYSSLLEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGMIRGLQKAKEFMSEADHNIKTGERG*
JGI24218J26658_10052275	3300002092	Lentic	MVQTYSSLLEYEIGRLIDEAISDELAILANGNVEDXKDYKFRVGMIRGLQKAKEFMSEADHNIKTGERG*
G310J44882_100661641	3300002933	Freshwater	MVQTYSSLLEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGIIRGFQRAKELMLEADHNIKTGERG*
JGI26470J50227_10023987	3300003375	Freshwater	MIQTYSTLIEYETGRLIDEAIADEIAILANGNVDDIKDYKFRVGMIRGLQKAKELMSEADRNIQSGERG*
JGI26470J50227_10261172	3300003375	Freshwater	MVQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARELMSEADSNIQSGERG*
JGI26470J50227_10530541	3300003375	Freshwater	MVQTYSSLLEYEIGRLIDEAIADEAAILANGNIEDIKDYKFRAGMIRGLNKARELMSEADRIIQSGERG*
JGI26470J50227_10787231	3300003375	Freshwater	VYTFRMVQTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKFRVGMIRGFQRAKELMSEADRIIQTGERG*
Ga0007811_10068943	3300003787	Freshwater	MVQTYSSLLEYEIGRLIDEAIADELAILVNGNVDDIKDYKFRVGVIRGLQRARELMSEADRIIQTGERG*
Ga0007835_10074462	3300003789	Freshwater	MVQTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKFRVGVIRGLQRARELMSEADRIIQTGERG*
Ga0007853_10041342	3300003795	Freshwater	MVQTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKLRVGMIRGLQKAKELMSEADSNIQSGERG*
Ga0007853_10047272	3300003795	Freshwater	MAQTYSSLLEYEIGRLLDEAIADETSILATGNIEDIKDYKFRVGMIRGFHRAKEFISEADRIIQSGERG*
Ga0007842_10027143	3300003798	Freshwater	MAQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARELMSEADSNIQSGERG*
Ga0007860_10152392	3300003800	Freshwater	LEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGIIRGFQRAKELMLEADHNIKTGERG*
Ga0007861_10065633	3300003812	Freshwater	MVQTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKFRVGMIRGLQRAKELMSEADRIIQTGERG*
Ga0007879_10157533	3300003813	Freshwater	CGVYIYRMVQTYSSLLXYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGMIRGLQKAKELMSEADHNIKTGERG*
Ga0007879_10286061	3300003813	Freshwater	MVQTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKFRVGMIRGFQRAKELMSEADRII
Ga0007877_10214091	3300003814	Freshwater	IPCGVYTFRMVQTYSSLLEYEIGRLIDEAIADELAILVNGNVDDIKDYKFRVGVIRGLQRARELMSEADRIIQTGERG*
Ga0007808_10036402	3300003943	Freshwater	RMVQTYSSLLEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGMIRGLQKAKELMSEADHNIKTGERG*
Ga0066222_12336992	3300004460	Marine	MVQTYSSVLEYEIGRLIEEAIADEIAILANGNIDDIKDYKLRVGMIRGLQKARELMSEADRIIQSGERG*
Ga0065177_10512282	3300004685	Freshwater	MVQTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKFRVGMIRGFQRAKELMSEADRIIQTGERG*
Ga0065173_10060582	3300004686	Freshwater	MVQTYSTYLEYEIGRLIDEAIADEIAILANGNVEDIKDYKLRVGIIRGLQKAKDLMPEADRNLQTGERG*
Ga0065171_10681682	3300004692	Freshwater	MVQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGLIRGLNKARELMSEADSNIQSGERG*
Ga0007804_100167011	3300004770	Freshwater	MVQTYSSLLEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGMIRGLQKAKELMSEADHNIKTGERG*
Ga0007797_10808972	3300004771	Freshwater	MPCGVYIYRMVQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGLIRGLNKARELMSEADSNIQSGERG*
Ga0007797_11134312	3300004771	Freshwater	VQTYSSLLEFETGRLIDEAIADELSVLMNGGIDTIQDYKFRVGLMRGLSKAKELMTEADRNIQTGERG*
Ga0007795_101308501	3300004773	Freshwater	PCGVYIYRMVQTYSSLLEYEIGRLIDEAIADEIAILANGNMDDIKDYKFRVGIIRGLQKARELMSEADHNIQSGERG*
Ga0007796_100396703	3300004804	Freshwater	MVQTYSSLLEFETGRLIDEAIADELSVLMNGGIDTIQDYKFRVGLMRGLSKAKELMT
Ga0007796_101144702	3300004804	Freshwater	MPCGVYIYRMVQTYSSLLEYEIGRLIDEAIADEIAILANGNVDDIKDYKFRVGIIRGLQKARELMSEAD
Ga0007809_101703041	3300004807	Freshwater	MAQTYSTLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARELMSEADSNIQSGERG*
Ga0007813_10675471	3300006103	Freshwater	CGVYIYRMVQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARELMSEADSNIQSGERG*
Ga0007833_10301061	3300006106	Freshwater	YEIGRLIDEAISDELAILANGNVEDIKDYKFRVGMIRGLQKAKELMSEADHNIKTGERG*
Ga0007858_10053511	3300006113	Freshwater	AQTYSSLLEYEIGRLLDEAIADETSILATGNIEDIKDYKFRVGMIRGFHRAKEFISEADRIIQSGERG*
Ga0007866_10904392	3300006119	Freshwater	MVQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGLIRGLNKARELMSEAD
Ga0007852_10112414	3300006123	Freshwater	QTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARELMSEADSNIQSGERG*
Ga0114962_104682272	3300009151	Freshwater Lake	MVQTYSSLLEYEIGRLIDEAISDEIAILANGNVDDIKDYKLRVGMIRGLKKARELMTEADRNIQSGERG*
Ga0114968_100305203	3300009155	Freshwater Lake	MQQTYSSRLEYEVGRLIDEAIADETSVLVAGSIEDIKDYKMRVGMIRGLYKAKELISEADTIIQSGERS*
Ga0114959_100056662	3300009182	Freshwater Lake	MVQTYSSLLEYEIGRLIDEAISDEIAILANGNVDDIKDYKLRVGMIRGLQKARELMTEADRNIQSGERG*
Ga0114964_100172316	3300010157	Freshwater Lake	MVQTYSSLLEYEIGRLIDEAIADEIAILANGNVDDIKDYKFRVGIIRGLQKARELMSEADHNIQSGERG*
Ga0157559_11120732	3300012694	Freshwater	MVQTYSSLLEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGIIRGFQRAKELMLEADHNIK
Ga0157579_10269262	3300012696	Freshwater	EIGRLIDEAISDELAILANGNVEDIKDYKFRVGIIRGFQRAKELMLEADHNIKTGERG*
Ga0157568_11093162	3300012750	Freshwater	MVQTYSSLLEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGIIRGFQRAKELMLEADHNIKT
Ga0157563_10270431	3300013068	Freshwater	MVQTYSSLLEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGIIRGFQRAKELMLEAD
Ga0164296_10521184	3300013093	Freshwater	VYIYRMVQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARELMSEADSNIQSGERG*
Ga0164297_100547594	3300013094	Freshwater	YETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARELMSEADSNIQSGERG*
Ga0136642_10269943	3300013285	Freshwater	MVQTYSSLLEFEAGRLIDEAIADELSVLMNGGIDTIQDYKFRVGLVRGLNKAKELIAEADSNIQTGERG*
Ga0136641_11272041	3300013286	Freshwater	MVQTYSSLLEYEIGRLIDEAMSDEIAILANGNVDDIKDYKLRVGMIRGLQKARELMTEADRNIQSGERG*
Ga0214194_1024552	3300020686	Freshwater	MVQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARELMSEADSNIQSGERG
Ga0214239_1144692	3300020688	Freshwater	MVQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARKLMSEADSNIQSGERG
Ga0214241_10085031	3300020698	Freshwater	IPCGVYIYRMVQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARELMSEADSNIQSGERG
Ga0214177_10102852	3300020705	Freshwater	MVQTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKFRVGMIRGLQRAKELMSEADRIIQTGERG
Ga0214177_10287262	3300020705	Freshwater	MVQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKEYKFRTGLIRGLNKARELMAEADSNIQTGERG
Ga0214244_10033303	3300020724	Freshwater	MVQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARELMSEADSNI
Ga0214246_10007393	3300020727	Freshwater	MYKCRMKQTYSTFLEYEIGRLIDEAVADEVSVLANGNIDKIEDYKTRVGIIKGLQKAKDLMLEADRNIQSGERG
Ga0214201_10243723	3300020732	Freshwater	MKQTYSTFLEYEIGRLIDEAVADEVSVLANGNIDKIEDYKTRVGIIKGLQKAKDLMLEADRNIQSGERG
Ga0214172_10269121	3300020733	Freshwater	MVQTYSSLLEYEIGRLIDEAIADEAAILANGNIEDIKDYKFRAGMIRGLNKARELMSEADRIIQSGERG
Ga0214219_10339152	3300020735	Freshwater	MKQTYSTFLEYEIGRLIDEAVADEVSVLANGNIDKIEDYKTRVGIIKGLQKAKDLMLEADRIIQSGERG
Ga0214219_10463162	3300020735	Freshwater	MVQTYSSLLEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGIIRGFQRAKELMLEADHNIKTGERG
Ga0214187_10041862	3300021126	Freshwater	MVQTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKFRTGVIRGLNKARKLMSEADSNIQSGERG
Ga0214193_10009141	3300021127	Freshwater	CGVYIYRMVQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARELMSEADSNIQSGERG
Ga0214193_10159052	3300021127	Freshwater	MIQTYSTLIEYETGRLIDEAIADEIAILANGNVDDIKDYKFRVGMIRGLQKAKELMSEADRNIQSGERG
Ga0214206_10130432	3300021131	Freshwater	MAQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGLIRGLNKARELMSEADSNIQSGERG
Ga0214192_10760082	3300021142	Freshwater	MVQTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKFRVGVIRGLQRARELMSEADRIIQTGERG
Ga0214923_104266952	3300023179	Freshwater	MKQTYSTYLEFEIGRLIDEAIADEIAILANGNVEDIKDYKYRVGIIKGLQKAKDLMSEADRNLQTGERG
Ga0208384_1014862	3300025328	Freshwater	MAQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARELMSEADSNIQSGERG
Ga0208384_1084792	3300025328	Freshwater	MVQTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKFRVGMIRGFQRAKELMSEADRIIQTGER
Ga0208615_1026203	3300025330	Freshwater	TYSSLLEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGIIRGFQRAKELMLEADHNIKTGERG
Ga0208252_1143482	3300025337	Freshwater	MVQTYSSLLEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGVIRGFQRAKELMLEADHNIKTGERG
Ga0208501_1001013	3300025338	Freshwater	MVQTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKFRVGMIRGFQRAKELMSEADRIIQTGERG
Ga0208737_10013551	3300025346	Freshwater	VYIYRMVQTYSSLLEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGMIRGLQKAKELMSEADHNIKTGERG
Ga0208255_1052251	3300025353	Freshwater	VQTYSSLLEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGMIRGLQKAKELMSEADHNIKTGERG
Ga0208504_10124903	3300025358	Freshwater	TYSSLLEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGMIRGLQKAKELMSEADHNIKTGERG
Ga0208385_10086463	3300025363	Freshwater	LKPHDGNICLMAQTYSSLLEYEIGRLLDEAIADETSILATGNIEDIKDYKFRVGMIRGFHRAKEFISEADRIIQSGERG
Ga0208385_10141342	3300025363	Freshwater	MVQTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKLRVGMIRGLQKAKELMSEADSNIQSGERG
Ga0208505_10016372	3300025366	Freshwater	MAQTYSSLLEYEIGRLLDEAIADETSILATGNIEDIKDYKFRVGMIRGFHRAKEFISEADRIIQSGERG
Ga0208505_10345141	3300025366	Freshwater	MVQTYSSLLEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGMIRGLQKAKELMSE
Ga0208108_10308202	3300025367	Freshwater	MVQTYSSLLEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGMIRGLQKAKELMSEADHNIKTGERG
Ga0208620_10303132	3300025368	Freshwater	MAQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARELMSEADRIIQSGERG
Ga0208382_10080473	3300025369	Freshwater	MVQTYSTYLEYEIGRLIDEAIADEIAILANGNVEDIKDYKLRVGIIRGLQKAKDLMPEADRNLQTGERG
Ga0207957_10022441	3300025372	Freshwater	VYIYRMVQTYSSLLEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGIIRGFQRAKELMLEADHNIKTGERG
Ga0207957_10383331	3300025372	Freshwater	MVQTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKFRVGVIRGLQRARELMSEADRIIQTGER
Ga0208738_10029763	3300025379	Freshwater	MVQTYSSLLEYEIGRLIDEAIADELAILVNGNVDDIKDYKFRVGVIRGLQRARELMSEADRIIQTGERG
Ga0208256_10026712	3300025382	Freshwater	MAQTYSTLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARELMSEADSNIQSGERG
Ga0207956_10402502	3300025385	Freshwater	MVQTYSTYLEYEIGRLIDEAIADEIAILANGNVEDIKDYKLRVGIIRGLQKAKDLMPEAD
Ga0208380_10377512	3300025392	Freshwater	MVQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGLIRGLNKARELMSEADSNIQSGERG
Ga0208380_10495501	3300025392	Freshwater	VQTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKFRVGVIRGLQRARELMSEADRIIQTGERG
Ga0208107_10043602	3300025399	Freshwater	MVQTYSSLLEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGIIRGFQRAKELMSEADHNIKTGERG
Ga0208614_10171581	3300025413	Freshwater	MVQTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKFRVGMIRGLQRAKELM
Ga0208111_10116051	3300025420	Freshwater	CLMAQTYSSLLEYEIGRLLDEAIADETSILATGNIEDIKDYKFRVGMIRGFHRAKEFISEADRIIQSGERG
Ga0208739_10438141	3300025426	Freshwater	LLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARELMSEADSNIQSGERG
Ga0208506_10213963	3300025428	Freshwater	VQTYSSLLEYETGRLIDEAIADEVAILMNGTVEDIKDYKFRTGVIRGLNKARELMSEADSNIQSGERG
Ga0208389_10916651	3300025470	Freshwater	LEYEIGRLIDEAISDELAILANGNVEDIKDYKFRVGMIRGLQKAKELMSEADHNIKTGER
Ga0208379_10501071	3300025598	Freshwater	YIYRMVQTYSSLLEYEIGRLIDEAIADEIAILANGNVDDIKDYKFRVGIIRGLQKARELMSEADHNIQSGERG
Ga0207954_10711453	3300025606	Freshwater	MPCGVYIYRMVQTYSSLLEYEIGRLIDEAIADEIAILANGNVDDIKDYKFRVGIIRGLQKARELMSEADHNIQSGERG
Ga0207954_10853391	3300025606	Freshwater	MVQTYSSLLEFETGRLIDEAIADELSVLMNGGIDTIQDYKFRVGLMRGLSKAKELMTEA
Ga0208867_10085712	3300025782	Freshwater	MVQTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKFRVGVIRGLQRARELMSEADRII
Ga0208867_10247273	3300025782	Freshwater	QTYSSLLEYEIGRLIDEAIADELAILANGNVDDIKDYKFRVGMIRGFQRAKELMSEADRIIQTGERG
Ga0208499_10598611	3300025789	Freshwater	LEYEIGRLLDEAIADETSILATGNIEDIKDYKFRVGMIRGFHRAKEFISEADRIIQSGER
Ga0209085_10316094	3300027741	Freshwater Lake	MPCGVYIYRMVQTYSSLLEYEIGRLIDEAISDEIAILANGNVDDIKDYKLRVGMIRGLKKARELMTEADRNIQSGERG
Ga0209085_13333811	3300027741	Freshwater Lake	LEYEIGRLIDEAISDEIAILANGNVDDIKDYKLRVGMIRGLQKARELMTEADRNIQSGER
Ga0209596_10679493	3300027754	Freshwater Lake	MQQTYSSRLEYEVGRLIDEAIADETSVLVAGSIEDIKDYKMRVGMIRGLYKAKELISEADTIIQSGERS
Ga0209829_100561142	3300027777	Freshwater Lake	MPCGVYIYRMVQTYSSLLEYEIGRLIDEAISDEIAILANGNVDDIKDYKFRVGIIRGLQKARELMSEADHNIQSGERG
Ga0209777_102417313	3300027896	Freshwater Lake Sediment	MVQTYSSLLEYEIGRLIDEAIADEAAILANGNIDDIKDYKFRVGMIRGLNKARELMSEADRIIKSGERG
Ga0209777_107961332	3300027896	Freshwater Lake Sediment	MYICLMAQTYSTFLEYEIGRLIDEAVADEVSILMAGNIDDIKDYKYRVGMIRGLEKAKELMSEADRNIQSGERG
Ga0304729_100096416	3300028392	Freshwater Lake	MVQTYSSLLEYEIGRLIDEAIADEIAILANGNVDDIKDYKFRVGIIRGLQKARELMSEADHNIQSGERG
Ga0316218_12180813	3300032117	Freshwater	YEIGRLIDEAIADEAAILANGNIEDIKDYKFRAGMIRGLNKARELMSEADRIIQSGERG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089762

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences