Metagenome / Metatranscriptome Family F089450

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089450
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	88 residues
Representative Sequence	MKSTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCACAEPDEVACEPQETARVIRFPGRGRYS
Number of Associated Samples	85
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	49.54 %
% of genes near scaffold ends (potentially truncated)	25.69 %
% of genes from short scaffolds (< 2000 bps)	74.31 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.899 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.761 % of family members)
Environment Ontology (ENVO)	Unclassified (22.018 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.037 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00857	Isochorismatase	39.45
PF01408	GFO_IDH_MocA	13.76
PF02894	GFO_IDH_MocA_C	6.42
PF01041	DegT_DnrJ_EryC1	5.50
PF13673	Acetyltransf_10	2.75
PF03023	MurJ	1.83
PF07690	MFS_1	1.83
PF03466	LysR_substrate	1.83
PF13508	Acetyltransf_7	1.83
PF02738	MoCoBD_1	0.92
PF06764	DUF1223	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	39.45
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	39.45
COG0673	Predicted dehydrogenase	General function prediction only [R]	6.42
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	5.50
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	5.50
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	5.50
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	5.50
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	5.50
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	5.50
COG0534	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	Defense mechanisms [V]	1.83
COG0728	Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis)	Cell wall/membrane/envelope biogenesis [M]	1.83
COG2244	Membrane protein involved in the export of O-antigen and teichoic acid	Cell wall/membrane/envelope biogenesis [M]	1.83
COG5429	Uncharacterized conserved protein, DUF1223 domain	Function unknown [S]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.90 %
Unclassified	root	N/A	21.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.90 %
Unclassified	root	N/A	21.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.90 %
Unclassified	root	N/A	21.10 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	68.81 %
Unclassified	root	N/A	21.10 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	56.88 %
Unclassified	root	N/A	21.10 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	44.95 %
Unclassified	root	N/A	21.10 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.10 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	19.27 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	5.50 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.10 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7.34 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	5.50 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	2.75 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.10 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7.34 %
Microvirga flocculans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga flocculans	5.50 %
unclassified Afipia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia	2.75 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.10 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7.34 %
Microvirga flocculans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga flocculans	5.50 %
Afipia sp. P52-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	2.75 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT02IMTR0	Not Available	572	Open in IMG/M
3300003320\|rootH2_10085592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3032	Open in IMG/M
3300003321\|soilH1_10170730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1951	Open in IMG/M
3300003324\|soilH2_10172544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga flocculans	4834	Open in IMG/M
3300004803\|Ga0058862_12688665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	684	Open in IMG/M
3300005329\|Ga0070683_100006136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10075	Open in IMG/M
3300005329\|Ga0070683_100014249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	6949	Open in IMG/M
3300005329\|Ga0070683_100190061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1950	Open in IMG/M
3300005332\|Ga0066388_102703396	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300005336\|Ga0070680_100094950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2472	Open in IMG/M
3300005336\|Ga0070680_101211458	Not Available	653	Open in IMG/M
3300005337\|Ga0070682_101678866	Not Available	551	Open in IMG/M
3300005434\|Ga0070709_10015039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga flocculans	4394	Open in IMG/M
3300005434\|Ga0070709_10388679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	1039	Open in IMG/M
3300005435\|Ga0070714_100017340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga flocculans	5832	Open in IMG/M
3300005436\|Ga0070713_100896725	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300005437\|Ga0070710_11316032	Not Available	538	Open in IMG/M
3300005458\|Ga0070681_10046908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga flocculans	4319	Open in IMG/M
3300005458\|Ga0070681_10133721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2411	Open in IMG/M
3300005529\|Ga0070741_10683829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	907	Open in IMG/M
3300005533\|Ga0070734_10049957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2543	Open in IMG/M
3300005533\|Ga0070734_10099849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1706	Open in IMG/M
3300005537\|Ga0070730_10001485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	22530	Open in IMG/M
3300005537\|Ga0070730_10541343	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300005539\|Ga0068853_100486282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga flocculans	1164	Open in IMG/M
3300005539\|Ga0068853_100852949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	874	Open in IMG/M
3300005578\|Ga0068854_102222377	Not Available	508	Open in IMG/M
3300005764\|Ga0066903_101569110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1247	Open in IMG/M
3300005764\|Ga0066903_102370974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1026	Open in IMG/M
3300006028\|Ga0070717_10921545	All Organisms → cellular organisms → Bacteria → Proteobacteria	795	Open in IMG/M
3300006163\|Ga0070715_10756696	Not Available	586	Open in IMG/M
3300006172\|Ga0075018_10553923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300006172\|Ga0075018_10666155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	559	Open in IMG/M
3300006173\|Ga0070716_100128267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1599	Open in IMG/M
3300006175\|Ga0070712_100579195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	948	Open in IMG/M
3300006175\|Ga0070712_101122316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	683	Open in IMG/M
3300006354\|Ga0075021_10929785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	565	Open in IMG/M
3300006797\|Ga0066659_10437597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1036	Open in IMG/M
3300006804\|Ga0079221_10145048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1234	Open in IMG/M
3300006806\|Ga0079220_10338752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	950	Open in IMG/M
3300006954\|Ga0079219_10116983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1348	Open in IMG/M
3300006954\|Ga0079219_10781513	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	746	Open in IMG/M
3300009093\|Ga0105240_10047966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga flocculans	5401	Open in IMG/M
3300009093\|Ga0105240_10120262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3163	Open in IMG/M
3300009174\|Ga0105241_10585026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1006	Open in IMG/M
3300009545\|Ga0105237_11172456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	775	Open in IMG/M
3300009545\|Ga0105237_11906447	Not Available	602	Open in IMG/M
3300009545\|Ga0105237_12208569	Not Available	560	Open in IMG/M
3300010043\|Ga0126380_10989038	Not Available	707	Open in IMG/M
3300010043\|Ga0126380_11161486	Not Available	663	Open in IMG/M
3300010043\|Ga0126380_11771173	Not Available	557	Open in IMG/M
3300010046\|Ga0126384_11616488	Not Available	610	Open in IMG/M
3300010048\|Ga0126373_12678665	Not Available	556	Open in IMG/M
3300010371\|Ga0134125_10011246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10035	Open in IMG/M
3300010376\|Ga0126381_100065714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4502	Open in IMG/M
3300010376\|Ga0126381_102766062	Not Available	701	Open in IMG/M
3300010376\|Ga0126381_103126241	All Organisms → cellular organisms → Bacteria → Proteobacteria	656	Open in IMG/M
3300011418\|Ga0153954_1000901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	19049	Open in IMG/M
3300012090\|Ga0153956_1010932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4188	Open in IMG/M
3300014325\|Ga0163163_11834778	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	666	Open in IMG/M
3300015371\|Ga0132258_10172912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5210	Open in IMG/M
3300015371\|Ga0132258_10980348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2136	Open in IMG/M
3300015372\|Ga0132256_100883994	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300015374\|Ga0132255_100283870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2377	Open in IMG/M
3300015374\|Ga0132255_101286113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1103	Open in IMG/M
3300016387\|Ga0182040_10396602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1082	Open in IMG/M
3300020069\|Ga0197907_11238611	All Organisms → cellular organisms → Bacteria → Proteobacteria	640	Open in IMG/M
3300020070\|Ga0206356_10563614	All Organisms → cellular organisms → Bacteria → Proteobacteria	607	Open in IMG/M
3300020076\|Ga0206355_1002063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1081	Open in IMG/M
3300020081\|Ga0206354_10883998	All Organisms → cellular organisms → Bacteria → Proteobacteria	661	Open in IMG/M
3300020579\|Ga0210407_10049632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3132	Open in IMG/M
3300020580\|Ga0210403_10760736	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300020582\|Ga0210395_11107156	Not Available	584	Open in IMG/M
3300021088\|Ga0210404_10046755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2018	Open in IMG/M
3300021168\|Ga0210406_10386467	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300021374\|Ga0213881_10063794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1569	Open in IMG/M
3300021384\|Ga0213876_10384853	Not Available	746	Open in IMG/M
3300021403\|Ga0210397_10019981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4107	Open in IMG/M
3300021405\|Ga0210387_10017845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5508	Open in IMG/M
3300021407\|Ga0210383_10710070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	864	Open in IMG/M
3300021432\|Ga0210384_10040390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4289	Open in IMG/M
3300021475\|Ga0210392_10363508	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300021479\|Ga0210410_10099781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2563	Open in IMG/M
3300021479\|Ga0210410_11417353	Not Available	587	Open in IMG/M
3300021560\|Ga0126371_10487712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1380	Open in IMG/M
3300021560\|Ga0126371_11029567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	964	Open in IMG/M
3300022527\|Ga0242664_1042641	All Organisms → cellular organisms → Bacteria → Proteobacteria	805	Open in IMG/M
3300025904\|Ga0207647_10436912	Not Available	734	Open in IMG/M
3300025905\|Ga0207685_10526732	Not Available	625	Open in IMG/M
3300025911\|Ga0207654_10163891	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300025912\|Ga0207707_10371728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1230	Open in IMG/M
3300025913\|Ga0207695_10434015	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300025914\|Ga0207671_10602478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	875	Open in IMG/M
3300025915\|Ga0207693_10863673	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300025944\|Ga0207661_10010680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6616	Open in IMG/M
3300026142\|Ga0207698_11145613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	791	Open in IMG/M
3300027775\|Ga0209177_10044723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1230	Open in IMG/M
3300027817\|Ga0209112_10071977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1084	Open in IMG/M
3300027826\|Ga0209060_10149089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1085	Open in IMG/M
3300027857\|Ga0209166_10003392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	11522	Open in IMG/M
3300027857\|Ga0209166_10392327	All Organisms → cellular organisms → Bacteria → Proteobacteria	721	Open in IMG/M
3300031573\|Ga0310915_11025806	Not Available	575	Open in IMG/M
3300031716\|Ga0310813_11455343	Not Available	637	Open in IMG/M
3300031896\|Ga0318551_10660535	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300031912\|Ga0306921_11561856	Not Available	719	Open in IMG/M
3300032180\|Ga0307471_102484480	Not Available	655	Open in IMG/M
3300032782\|Ga0335082_10799629	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	805	Open in IMG/M
3300032805\|Ga0335078_10465430	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
3300033475\|Ga0310811_11227205	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.15%
Host-Associated	Host-Associated	22.94%
Engineered	Engineered	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.39%
Plants	Host-Associated → Plants	20.18%
Aquatic	Environmental → Aquatic	2.75%
Fungi	Host-Associated → Fungi	1.83%
Human	Host-Associated → Human	0.92%
Solid Waste	Engineered → Solid Waste	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.26%
Sediment	Environmental → Aquatic → Sediment	2.75%
Roots	Host-Associated → Plants → Roots	1.83%
Mycelium	Host-Associated → Fungi → Mycelium	1.83%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.92%
Digestive System	Host-Associated → Human → Digestive System	0.92%
Rhizome	Host-Associated → Plants → Rhizome	0.92%
Grass	Engineered → Solid Waste → Grass	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.79%
Loam	Environmental → Terrestrial → Soil → Loam	23.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.83%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.83%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.92%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.92%
Composting	Engineered → Solid Waste → Grass → Composting	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	20.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.83%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.92%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.92%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.92%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.92%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.17%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	9.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	8.26%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.83%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.83%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.92%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.92%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.92%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.92%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.92%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011418	Attine ant fungus gardens microbial communities from Florida, USA - TSFL038 MetaG	Host-Associated	Open in IMG/M
3300012090	Attine ant fungus gardens microbial communities from Florida, USA - TSFL040 MetaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_01094190	2170459016	Switchgrass, Maize And Mischanthus Litter	EVTATQDWIAEQMTKRFLGGGKMTNTIDRKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEIDTLCAVAADPGPREPEETAQLIKFPARGRYSR
rootH2_100855923	3300003320	Sugarcane Root And Bulk Soil	MTNTIDRKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIKINLHRISDQEIDTLCAAADPGSRMEAAEETAQLIKFPARGRYSR*
soilH1_101707302	3300003321	Sugarcane Root And Bulk Soil	MKNTIDRKLDLMARSLQEHINLAKELNMNFVAQLLTMTAMEIRINLHRISDQEIDTLCASAAGQHCVPEEQERESARVINFPRRGRYT*
soilH2_101725441	3300003324	Sugarcane Root And Bulk Soil	MTNTIDRKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRMNLHRISQQEIDSLCARAEAQNAAQGTRETRETARVINFP
Ga0058862_126886652	3300004803	Host-Associated	MSSTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISEQEMDTLCARAEQQAQSTGPREPQETARVINFPARGRYS
Ga0070683_1000061366	3300005329	Corn Rhizosphere	MKNTIDRKLDLMARSLQEHINLAKELNMNFVAQLLTMTAMEIRINLHRISDQEIDTLCASAAGQHCVPEEEERESARVINFPRRGRYT*
Ga0070683_1000142493	3300005329	Corn Rhizosphere	MSSTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISEQEMDTLCARAEQQAQSTGPREPQETARVINFPARGRYS*
Ga0070683_1001900613	3300005329	Corn Rhizosphere	MKSTMDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCAFAEPKPVAREPKETARVIRFPGRGRCS*
Ga0066388_1027033962	3300005332	Tropical Forest Soil	MTSTIDRKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEIDSLCAAAAEPRSKAPSPDETARVIKFPARGRYS*
Ga0070680_1000949502	3300005336	Corn Rhizosphere	MSSTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISEQEMDTLCARAEQQAQSSGPREPQETARVINFPARGRYS*
Ga0070680_1012114581	3300005336	Corn Rhizosphere	RSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCAFAEPKPVAREPKETARVIRFPGRGRCS*
Ga0070682_1016788661	3300005337	Corn Rhizosphere	MKSTIDAKLDLMARSLQEHINLAKELDLNFVAQLLTMTAMEIRINLHRISQQEMDTLCAVADPKQAAREPQESARVIRFPGRGRCS*
Ga0070709_100150392	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNNTIDDKLDLMARSLQEHINLAKELNLNFIAQLLTMTAMEIRMNLHRISQQEMDSLCARAEAQSLTPAPRETREPEEFRETARVISFPARGRYS*
Ga0070709_103886791	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSSTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISEQEMDTLCARAEQQAQSPASREPQETARVINFPARGRYS*
Ga0070714_1000173406	3300005435	Agricultural Soil	MKTTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCACAEPEQVACEPQESARVIRFPGRGRLS*
Ga0070713_1008967251	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	ASMKTTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCACAEPEQVACEPQESARVIRFPGRGRLS*
Ga0070710_113160321	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	RSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEIDTLCAVAADPGRREPEETAQLIKFPARGRYSR*
Ga0070681_100469085	3300005458	Corn Rhizosphere	MKNTIDRKLDLMARSLQEHINLAKELNMNFVAQLLTMTAMEIRINLHRISDQEIDTLCASAAGQHCVPEEEQRESARVINFPRRGRYT*
Ga0070681_101337213	3300005458	Corn Rhizosphere	MSNTIDDKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRMNLHRISQQEMDTLCARAEALTRASAPQEPQETARVINFPARGRYS*
Ga0070741_106838292	3300005529	Surface Soil	MARSLQEHINLAKELNMNFVAQLLTMTAMEIRINLHRISDQEIDTLCASVGQYRAPEEEREPARVISFPRRGRYT*
Ga0070734_100499572	3300005533	Surface Soil	MTNTIDRKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEIDTLCAVAADPGPREPEETAQLIKFPARGRYSR*
Ga0070734_100998493	3300005533	Surface Soil	MSNEMSKTIDDKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRMNLHRISQQEMDSLCARAEAQTTLPALQEALDIRDTQEQHQETARVISFPARGRYS*
Ga0070730_1000148525	3300005537	Surface Soil	MSSTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEIDTLCAAAAEGGHEAQAAQETARVIKFPSRGRYS*
Ga0070730_105413432	3300005537	Surface Soil	MKNTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEIDTLCASAERGSVMPEEPKTASVISFPRRGRYS*
Ga0068853_1004862821	3300005539	Corn Rhizosphere	MKSTMDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCAFAEPKPVAREPKETARVIR
Ga0068853_1008529492	3300005539	Corn Rhizosphere	MSNTIDDKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISEQEMDTLCARAEQQAQSSGPREPQETARVINFPARGRYS*
Ga0068854_1022223772	3300005578	Corn Rhizosphere	MSSTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEIDTLCAAAAEGGPRVQAVEETACTLGPPSAAAAHKVSIS
Ga0066903_1015691102	3300005764	Tropical Forest Soil	MSSEMSNTIDDKLDLMARSLQEHINLAKELNLNFIAQLLTMTAMEIRINLHRISDQEIDTLCAAAARSGTKAEEPDETARVIKFPARGRYS*
Ga0066903_1023709742	3300005764	Tropical Forest Soil	MKNRIDRKLDLMARSLQEHINLARELKLNFVAQLLTMTAMEIRINLHRISEREIDTLCASAERRSAGPEERETARVINFPPRGRYS*
Ga0070717_109215451	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKNTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCACAEPEQVACEPQESARVIRFPGRGRLS*
Ga0070715_107566961	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	TIDDKLDLMARSLQEHINLAKELNLNFIAQLLTMTAMEIRMNLHRISQQEMDSLCARAEAQSLTPAPRETREPEEFRETARVISFPARGRYS*
Ga0075018_105539231	3300006172	Watersheds	MTSTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISEQEIDTLCAAAAGSNPQIEPEDKTCVIKFPARGRYS*
Ga0075018_106661552	3300006172	Watersheds	MTSTIDRKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEMDTLCAAAADPGPREPEETAQLIKFPARGRYSR*
Ga0070716_1001282671	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSSTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISEQEMDTLCARAEQQAQSPASREPQETARVI
Ga0070712_1005791952	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTNTIDRKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEIDTLCAVAADPGRREPEETAQLIKFPARGRYSR*
Ga0070712_1011223161	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSSTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCACAEPEQVACEPQESARVIRFPGRGRLS*
Ga0075021_109297852	3300006354	Watersheds	MTNTIDRKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIKINLHRISDQEIDTLCAAAEPGSRAQDAEETARVINFPARGRYSR*
Ga0066659_104375971	3300006797	Soil	MSNTIDDKLDLMARSLQEHINLAKELKLNFVAQLLTMTAMEIRINLHRISEQEMDTLCARAEQQAQSPASREPRETARVINFPARGRYS*
Ga0079221_101450482	3300006804	Agricultural Soil	MKSTVDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTALEIRINLHRISQQEMDMLCAFVEPKQVAREPQETARVIRFPGRGRCS*
Ga0079220_103387521	3300006806	Agricultural Soil	MSNTIDDKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRMNLHRISQQEMDSLCARAEAQSLPPAPRETHETARVISFPARGRYS*
Ga0079219_101169832	3300006954	Agricultural Soil	MSNTIDDKLDLMARSLQEHINLAKELNLNFIAQLLTMTAMEIRMNLHRISQQEMDSLCARAVAHSLPPAPQEMPEAEESHETARVISFPARGRYS*
Ga0079219_107815132	3300006954	Agricultural Soil	DDKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRMNLHRISQQEMDSLCARAEAQSLPPAPRETHETARVISFPARGRYS*
Ga0105240_100479663	3300009093	Corn Rhizosphere	MDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCAFAEPKPVAREPKETARVIRFPGRGRCS*
Ga0105240_101202622	3300009093	Corn Rhizosphere	MSRTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISEQEMDTLCARAEQQAQSSGPREPQETARVINFPARGRYS*
Ga0105241_105850263	3300009174	Corn Rhizosphere	MSSTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRMNLHRISQQEMDSLCARAEAQSLKPAPQEEPEEFHKTARVISF
Ga0105237_111724561	3300009545	Corn Rhizosphere	MSNTIDDKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRMNLHRISQQEMNSLCARAEAMSSASASQEPRESARVINFPARGRYS
Ga0105237_119064472	3300009545	Corn Rhizosphere	MSSTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISEQEIDTLCAAAAGSGSNATEPEDAACVIKFPARGRYS*
Ga0105237_122085691	3300009545	Corn Rhizosphere	KLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISEQEMDTLCARAEQQAQSSGPREPQETARVINFPARGRYS*
Ga0126380_109890382	3300010043	Tropical Forest Soil	MKTTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCACAEPKEVECEPQESARVIRFPGRGRLS*
Ga0126380_111614862	3300010043	Tropical Forest Soil	MSSEMSNTIDDKLDLMARSLQEHINLAKELNLNFIAQLLTMTAMEIRMNLHRISQQEMDSLCARAEAQRSPAVQETGGPHETARVISFPARGRYS*
Ga0126380_117711732	3300010043	Tropical Forest Soil	MDNTIDRKLDLMARSLQEHINLAKELNLNFIAQLLTMTAMEIKMNLHRISDQEIDTLCASAAQFRGPQQEGETARVISFPRRGRYS*
Ga0126384_116164881	3300010046	Tropical Forest Soil	LMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEIDTLCAAAADPGSKAPEPDGTAQVIKFPARGRYS*
Ga0126373_126786651	3300010048	Tropical Forest Soil	MKNTIDRKLDLMARSLQEHINLAKELNMNFVAQLLTMTAMEIRINLHRISDQEIDTLCASAGQHAAPEEEERQSARVISFPRRGRNT*
Ga0134125_100112465	3300010371	Terrestrial Soil	MSSTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEIDTLCAAAAEGGPRVQAVEETARVIKFPSRGRYS*
Ga0126381_1000657146	3300010376	Tropical Forest Soil	MKNRIDRKLDLMARSLQEHINLARELKLNFVAQLLTMTAMEIRINLHRISEQEIDTLCASAERRSAGPEERETARVINFPPRGRYS*
Ga0126381_1027660622	3300010376	Tropical Forest Soil	MKSTTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQQEMDTLCACAEPNEVAHEPQETARVIRFPGRGRYS*
Ga0126381_1031262411	3300010376	Tropical Forest Soil	MKTTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDQLCACAESTEVEYEPQESARVIRFPSRGRFS*
Ga0153954_10009017	3300011418	Attine Ant Fungus Gardens	MNNIDRKLDLMARSLQEHINLAKELKLNFVAQLLTMTAMEIRINLHRISEQEIDTLCAEARAALHEDRPTASVINFPRRGRYS*
Ga0153956_10109323	3300012090	Attine Ant Fungus Gardens	MDNIDRKLDLMARSLQEHINLAKELKLNFVAQLLTMTAMEIRINLHRISEQEIDTLCAEARAALHEDRPTASVINFPRRGRYS*
Ga0163163_118347781	3300014325	Switchgrass Rhizosphere	HKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISEQEMDTLCARAEQQAQSPASREPQETARVINFPARGRYS*
Ga0132258_101729125	3300015371	Arabidopsis Rhizosphere	MSTIDDKLDLMARSLQEHISLAKELKLNFVAQLLTMTAMEIRINLHRISQQEMDTLCARAEAQVSRSSSRERRESARVINFPARGRYS*
Ga0132258_109803482	3300015371	Arabidopsis Rhizosphere	MSNTIDDKLDLMARSLQEHINLAKELNLNFIAQLLTMTAMEIRMNLHRISQQEMDSLCARAEAQNSRPAVQETGEAHETARVINFPARGRYS*
Ga0132256_1008839942	3300015372	Arabidopsis Rhizosphere	SLQEHINLAKELNLNFIAQLLTMTAMEIRMNLHRISQQEMDSLCARAEAQNSPPAVQETGEAHETARVISFPARGRYS*
Ga0132255_1002838703	3300015374	Arabidopsis Rhizosphere	MSNTIDDKLDLMARSLQEHINLAKELNLNFIAQLLTMTAMEIRMNLHRISQQEMDSLCARAEARNSPPAVQETEEAHETARVISFPARGRYS*
Ga0132255_1012861131	3300015374	Arabidopsis Rhizosphere	MSTIDDKLDLMARSLQEHISLAKELKLNFVAQLLTMTAMEIRINLHRISQQEMDTLCARAEAQVWRSSSRERRESARVINFPARGRYS*
Ga0182040_103966023	3300016387	Soil	MTNTIDRKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEIDTLCAAAADPGSRAVEPDETARVIKFPARGRYS
Ga0197907_112386111	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MKSTMDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCAFAEPKPVAREPKETARVIRFPGRGRCS
Ga0206356_105636141	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MSSTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISEQEMDTLCARAEQQAQSTGPREPQETARVINFPARGRCS
Ga0206355_10020633	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	MKNTVDAKLDLMARSLQEHINLAKELDLNFVAQLLTMTAMEIRINLHRISQQEMDTLCAVADPKQAAREPQESARVIRFPGRGRCS
Ga0206354_108839981	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MKSTIDAKLDLMARSLQEHINLAKELDLNFVAQLLTMTAMEIRINLHRISQQEMDTLCAVADPKQAAREPQESARVIRFPGRGRCS
Ga0210407_100496322	3300020579	Soil	MKSTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCACAEPNEVACEPQETARIIRFPGRGRLS
Ga0210403_107607362	3300020580	Soil	MKNTIDRKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEIDTLCASAEQRSVEPEEHETARVINFPRRGRYS
Ga0210395_111071561	3300020582	Soil	GAGSRDRRQPFLCWGDSSMKSTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCACAEPNEVACEPQETARIIRFPGRGRLS
Ga0210404_100467552	3300021088	Soil	MKSTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEIDTLCACAEPNEVACEPQETARIIRFPGRGRLS
Ga0210406_103864671	3300021168	Soil	DLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDEEIDTLCASAERRSIVPEEERETACVINFPRRGRFS
Ga0213881_100637942	3300021374	Exposed Rock	MKTTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCACAELEQVACEPQESARVIRFPGRGRLS
Ga0213876_103848532	3300021384	Plant Roots	MKTTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCACAEPQEVVCEPQESARVIRFPGRGRLS
Ga0210397_100199812	3300021403	Soil	MKSTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIKINLHRISQAEMDTLCACAEPNEVAREPQETARVIRFPGRGRFS
Ga0210387_100178452	3300021405	Soil	MNSTIDAKLDLMARSLQEHINLARELNLNFVAQLLTMTAMEIRINLHRISQAEMETLCAYAEPAQVACEPQESARVIRFPGRGRYS
Ga0210383_107100701	3300021407	Soil	MKSTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCACAEPNEVACEPQETARVIRFPGRGRFS
Ga0210384_100403904	3300021432	Soil	HHDTELALGTDGNRFYAGGVVSMKSTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCACAEPNEVACEPQETARIIRFPGRGRLS
Ga0210392_103635081	3300021475	Soil	MKNPIDRKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDEEIDTLCASAERRSIVPEEERETACVINFPRRGRFS
Ga0210410_100997813	3300021479	Soil	ELALGTDGNRFYAGGVVSMKSTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCACAEPNEVACEPQETARIIRFPGRGRLS
Ga0210410_114173531	3300021479	Soil	ELALGTDGNRFYAGGVVSMKSTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCACAEPTEVACEPQETARVIRFPGRGRFS
Ga0126371_104877122	3300021560	Tropical Forest Soil	MKTTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDQLCACAESTEVEYEPQESARVIRFPGRGRFS
Ga0126371_110295672	3300021560	Tropical Forest Soil	MKNRIDRKLDLMARSLQEHINLARELKLNFVAQLLTMTAMEIRINLHRISEQEIDTLCASAERRSAGPEERETARVINFPPRGRYS
Ga0242664_10426412	3300022527	Soil	MKSTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMETLCAYAEPAQVACEPQESARVIRFPGRGRYS
Ga0207647_104369122	3300025904	Corn Rhizosphere	MARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQQEMDTLCAVADPKQAAREPQESARVIRFPGRGRCS
Ga0207685_105267321	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	SDGKHFLGSEMNNTIDDKLDLMARSLQEHINLAKELNLNFIAQLLTMTAMEIRMNLHRISQQEMDSLCARAEAQSLTPAPRETREPEEFRETARVISFPARGRYS
Ga0207654_101638911	3300025911	Corn Rhizosphere	MSSTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISEQEMDTLCARAEQQAQSSGPREPQETARVINFPARGRYS
Ga0207707_103717282	3300025912	Corn Rhizosphere	MSNTIDDKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRMNLHRISQQEMDTLCARAEALTRASAPQEPQETARVINFPARGRYS
Ga0207695_104340152	3300025913	Corn Rhizosphere	IDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISEQEMDTLCARAEQQAQSSGPREPQETARVINFPARGRYS
Ga0207671_106024781	3300025914	Corn Rhizosphere	MTNTIDRKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEIDTLCAVAADPGPREPEETAQLIKFPARGRYSR
Ga0207693_108636732	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSSTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCACAEPEQVACEPQESARVIRFPGRGRLS
Ga0207661_100106805	3300025944	Corn Rhizosphere	MKNTIDRKLDLMARSLQEHINLAKELNMNFVAQLLTMTAMEIRINLHRISDQEIDTLCASAAGQHCVPEEEERESARVINFPRRGRYT
Ga0207698_111456131	3300026142	Corn Rhizosphere	MNSTIDDKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRMNLHRISQQEMNSLCARAEAMSSASASQEPRESARVINFPARGRYS
Ga0209177_100447232	3300027775	Agricultural Soil	MSNTIDDKLDLMARSLQEHINLAKELNLNFIAQLLTMTAMEIRMNLHRISQQEMDSLCARAVAHSLPPAPQEMPEAEESHETARVISFPARGRYS
Ga0209112_100719771	3300027817	Forest Soil	MKDSIDNKLDLMARSLQEHINLAKELKLNFVAQLLTMTAMEIKINLHRISDQEMDTLCASAGQVSANGAKDGTAHVIPFPKRGRHS
Ga0209060_101490892	3300027826	Surface Soil	MSKTIDDKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRMNLHRISQQEMDSLCARAEAQTTLPALQEALDIRDTQEQHQETARVISFPARGRYS
Ga0209166_100033926	3300027857	Surface Soil	MSSTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEIDTLCAAAAEGGHEAQAAQETARVIKFPSRGRYS
Ga0209166_103923272	3300027857	Surface Soil	MKNTIDHKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEIDTLCASAERGSVMPEEPKTASVISFPRRGRYS
Ga0310915_110258061	3300031573	Soil	MTNTIDRKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEIDTLCAAAADPGSRAVAPDETARVIKFPARGRYSR
Ga0310813_114553432	3300031716	Soil	MKSTMDRKLDLMARSLQEHINLARELKLDFVAQLLTMTAMEIRINLHRISEQEMDTLCARAEQQAQSTGPREPQETARVINFPARGRYS
Ga0318551_106605352	3300031896	Soil	MKNTIDRKLDLMARSLQEHINLAKELNMNFVAQLLTMTAMEIRINLHRISDQEIDTLCASAGQHAAPEEEERQSARVISFPRRGRYT
Ga0306921_115618561	3300031912	Soil	MARSLQEHINLAKELNMNFVAQLLTMTAMEIRINLHRISDQEIDTLCASAGQHAAPEEEERQSARVISFPRRGRYT
Ga0307471_1024844801	3300032180	Hardwood Forest Soil	MKSTIDAKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISQAEMDTLCACAEPDEVACEPQETARVIRFPGRGRYS
Ga0335082_107996292	3300032782	Soil	MTNTIDRKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIKINLHRISDQEIDTLCAAADPGSRVQAVEETAQLIKFPARGRFSR
Ga0335078_104654301	3300032805	Soil	MKNTIDRKLDLMARSLQEHINLAKELNLNFVAQLLTMTAMEIRINLHRISDQEIDSLCASAERRSAVPDEEQGTAHVINFPRRGRYS
Ga0310811_112272051	3300033475	Soil	MNNTIDDKLDLMARSLQEHINLAKELNLNFIAQLLTMTAMEIRMNLHRISQQEMDSLCARAEAQSLKAAPQEEPEEFHKTARVISFPARG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089450

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences