Metagenome / Metatranscriptome Family F089166

Basic Information
Family ID	F089166
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	56 residues
Representative Sequence	MCIACELGYWAMVDALEAERNAAKKSIAVEDPSFACEPGAEEAEPSSAPRVQRTVDEPAP
Number of Associated Samples	89
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.16 %
% of genes near scaffold ends (potentially truncated)	39.45 %
% of genes from short scaffolds (< 2000 bps)	82.57 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Most Common Taxonomy
Group	Unclassified (53.211 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil (12.844 % of family members)
Environment Ontology (ENVO)	Unclassified (31.193 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.954 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.09% β-sheet: 0.00% Coil/Unstructured: 65.91%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF01425	Amidase	44.04
PF02686	Glu-tRNAGln	38.53
PF03060	NMO	7.34
PF02934	GatB_N	2.75
PF03652	RuvX	2.75
PF02729	OTCace_N	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	44.04
COG0721	Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit	Translation, ribosomal structure and biogenesis [J]	38.53
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	7.34
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	7.34
COG0064	Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit	Translation, ribosomal structure and biogenesis [J]	2.75
COG0816	YqgF/RuvX protein, pre-16S rRNA maturation RNase/Holliday junction resolvase/anti-termination factor	Translation, ribosomal structure and biogenesis [J]	2.75
COG2511	Archaeal Glu-tRNAGln amidotransferase subunit E, contains GAD domain	Translation, ribosomal structure and biogenesis [J]	2.75

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
All Organisms	root	All Organisms	46.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
cellular organisms	root	All Organisms → cellular organisms	46.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	44.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	39.45 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8753337	Not Available	1319	Open in IMG/M
2162886007\|SwRhRL2b_contig_3121929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	955	Open in IMG/M
2228664021\|ICCgaii200_c1113547	Not Available	606	Open in IMG/M
3300000890\|JGI11643J12802_11185271	Not Available	733	Open in IMG/M
3300000953\|JGI11615J12901_11534996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	951	Open in IMG/M
3300001139\|JGI10220J13317_11179203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	807	Open in IMG/M
3300001915\|JGI24741J21665_1034100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	757	Open in IMG/M
3300002459\|JGI24751J29686_10027799	Not Available	1175	Open in IMG/M
3300003371\|JGI26145J50221_1039161	Not Available	501	Open in IMG/M
3300003911\|JGI25405J52794_10094948	Not Available	662	Open in IMG/M
3300003994\|Ga0055435_10020284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1400	Open in IMG/M
3300004062\|Ga0055500_10126067	Not Available	589	Open in IMG/M
3300004070\|Ga0055488_10106119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	690	Open in IMG/M
3300004114\|Ga0062593_102283727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	608	Open in IMG/M
3300004114\|Ga0062593_102665133	Not Available	569	Open in IMG/M
3300004114\|Ga0062593_102665134	Not Available	569	Open in IMG/M
3300004145\|Ga0055489_10263183	Not Available	549	Open in IMG/M
3300004157\|Ga0062590_101805989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	627	Open in IMG/M
3300004463\|Ga0063356_102504214	Not Available	791	Open in IMG/M
3300004479\|Ga0062595_100690796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	817	Open in IMG/M
3300004479\|Ga0062595_101546008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	615	Open in IMG/M
3300005093\|Ga0062594_101873836	Not Available	635	Open in IMG/M
3300005146\|Ga0066817_1002315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1163	Open in IMG/M
3300005162\|Ga0066814_10008582	Not Available	1201	Open in IMG/M
3300005162\|Ga0066814_10061621	Not Available	640	Open in IMG/M
3300005164\|Ga0066815_10015718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1001	Open in IMG/M
3300005169\|Ga0066810_10016506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1175	Open in IMG/M
3300005169\|Ga0066810_10185363	Not Available	516	Open in IMG/M
3300005330\|Ga0070690_100649290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	806	Open in IMG/M
3300005332\|Ga0066388_100172587	All Organisms → cellular organisms → Bacteria → Proteobacteria	2763	Open in IMG/M
3300005332\|Ga0066388_103283144	Not Available	826	Open in IMG/M
3300005332\|Ga0066388_106005804	Not Available	613	Open in IMG/M
3300005406\|Ga0070703_10106445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	997	Open in IMG/M
3300005471\|Ga0070698_101203579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	707	Open in IMG/M
3300005530\|Ga0070679_100484559	All Organisms → cellular organisms → Bacteria → Proteobacteria	1181	Open in IMG/M
3300005713\|Ga0066905_100751733	Not Available	841	Open in IMG/M
3300005713\|Ga0066905_101453615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	622	Open in IMG/M
3300005764\|Ga0066903_105237562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	686	Open in IMG/M
3300005843\|Ga0068860_100172226	Not Available	2091	Open in IMG/M
3300006178\|Ga0075367_10491879	Not Available	778	Open in IMG/M
3300006195\|Ga0075366_10949979	Not Available	536	Open in IMG/M
3300006574\|Ga0074056_11712824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	583	Open in IMG/M
3300006579\|Ga0074054_12050180	Not Available	541	Open in IMG/M
3300006581\|Ga0074048_10074869	Not Available	1336	Open in IMG/M
3300006854\|Ga0075425_100221781	All Organisms → cellular organisms → Bacteria → Proteobacteria	2175	Open in IMG/M
3300006871\|Ga0075434_100688910	Not Available	1040	Open in IMG/M
3300006954\|Ga0079219_10477424	Not Available	863	Open in IMG/M
3300007076\|Ga0075435_100658577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	909	Open in IMG/M
3300009098\|Ga0105245_11865912	Not Available	654	Open in IMG/M
3300009162\|Ga0075423_10575052	All Organisms → cellular organisms → Bacteria → Proteobacteria	1187	Open in IMG/M
3300009162\|Ga0075423_13143818	Not Available	506	Open in IMG/M
3300009174\|Ga0105241_12160907	Not Available	551	Open in IMG/M
3300009176\|Ga0105242_10294343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1479	Open in IMG/M
3300009551\|Ga0105238_10107627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2769	Open in IMG/M
3300010362\|Ga0126377_10003895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10705	Open in IMG/M
3300010362\|Ga0126377_10224915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1812	Open in IMG/M
3300010362\|Ga0126377_11530002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	741	Open in IMG/M
3300010371\|Ga0134125_10998498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	918	Open in IMG/M
3300010371\|Ga0134125_11387277	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300010397\|Ga0134124_10284604	Not Available	1534	Open in IMG/M
3300012474\|Ga0157356_1028526	Not Available	501	Open in IMG/M
3300012476\|Ga0157344_1013602	Not Available	626	Open in IMG/M
3300012489\|Ga0157349_1000981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1524	Open in IMG/M
3300012496\|Ga0157353_1000573	All Organisms → cellular organisms → Bacteria → Proteobacteria	1890	Open in IMG/M
3300012908\|Ga0157286_10322811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300012910\|Ga0157308_10329199	Not Available	570	Open in IMG/M
3300012943\|Ga0164241_10334717	Not Available	1083	Open in IMG/M
3300012986\|Ga0164304_10153567	Not Available	1453	Open in IMG/M
3300014299\|Ga0075303_1033264	Not Available	817	Open in IMG/M
3300015371\|Ga0132258_11077547	Not Available	2031	Open in IMG/M
3300015374\|Ga0132255_100045999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5648	Open in IMG/M
3300015374\|Ga0132255_100082608	Not Available	4308	Open in IMG/M
3300015374\|Ga0132255_100294801	Not Available	2333	Open in IMG/M
3300015374\|Ga0132255_104772650	Not Available	574	Open in IMG/M
3300019356\|Ga0173481_10001520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5632	Open in IMG/M
3300023072\|Ga0247799_1036682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	788	Open in IMG/M
3300025271\|Ga0207666_1001273	All Organisms → cellular organisms → Bacteria → Proteobacteria	2976	Open in IMG/M
3300025321\|Ga0207656_10490945	Not Available	623	Open in IMG/M
3300025549\|Ga0210094_1102904	Not Available	542	Open in IMG/M
3300025580\|Ga0210138_1152432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300025920\|Ga0207649_11074157	Not Available	635	Open in IMG/M
3300025945\|Ga0207679_10333335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1317	Open in IMG/M
3300026690\|Ga0207494_100908	Not Available	673	Open in IMG/M
3300026740\|Ga0207439_103296	Not Available	558	Open in IMG/M
3300026751\|Ga0207594_103107	Not Available	684	Open in IMG/M
3300026767\|Ga0207469_102145	Not Available	500	Open in IMG/M
3300026828\|Ga0207502_102925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	795	Open in IMG/M
3300026867\|Ga0207475_1000086	Not Available	2556	Open in IMG/M
3300027411\|Ga0207519_103308	Not Available	650	Open in IMG/M
3300027682\|Ga0209971_1070778	Not Available	846	Open in IMG/M
3300027992\|Ga0247750_1017832	Not Available	700	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1000477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6247	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1115732	Not Available	585	Open in IMG/M
3300031226\|Ga0307497_10023847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1922	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1000575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7534	Open in IMG/M
3300031538\|Ga0310888_10016725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2974	Open in IMG/M
3300031538\|Ga0310888_10865622	Not Available	562	Open in IMG/M
3300031547\|Ga0310887_10045179	Not Available	1944	Open in IMG/M
3300031720\|Ga0307469_10403620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1168	Open in IMG/M
3300031740\|Ga0307468_100181768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1397	Open in IMG/M
3300031847\|Ga0310907_10126688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1142	Open in IMG/M
3300031892\|Ga0310893_10010369	Not Available	2523	Open in IMG/M
3300031940\|Ga0310901_10541523	Not Available	526	Open in IMG/M
3300032180\|Ga0307471_101367539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	869	Open in IMG/M
3300032421\|Ga0310812_10005582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4074	Open in IMG/M
3300032421\|Ga0310812_10043493	Not Available	1703	Open in IMG/M
3300034820\|Ga0373959_0020632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1258	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.48%
Host-Associated	Host-Associated	27.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.97%
Plants	Host-Associated → Plants	27.52%
Aquatic	Environmental → Aquatic	5.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.93%
Marine	Environmental → Aquatic → Marine	5.50%
Roots	Host-Associated → Plants → Roots	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.13%
Loam	Environmental → Terrestrial → Soil → Loam	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.26%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.50%
Sand	Environmental → Terrestrial → Soil → Sand	2.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.75%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	15.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.26%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.50%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.75%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.75%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	12.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.34%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.75%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	2.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.75%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	2.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.83%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.92%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001915	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7	Host-Associated	Open in IMG/M
3300002459	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6	Host-Associated	Open in IMG/M
3300003371	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM	Host-Associated	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004070	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012474	Unplanted soil (control) microbial communities from North Carolina - M.Soil.3.yng.040610	Environmental	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014299	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025549	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025580	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026690	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A4a-11 (SPAdes)	Environmental	Open in IMG/M
3300026740	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1w-12 (SPAdes)	Environmental	Open in IMG/M
3300026751	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A2w-12 (SPAdes)	Environmental	Open in IMG/M
3300026767	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A1-11 (SPAdes)	Environmental	Open in IMG/M
3300026828	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A5-12 (SPAdes)	Environmental	Open in IMG/M
3300026867	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A5-12 (SPAdes)	Environmental	Open in IMG/M
3300027411	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-12 (SPAdes)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027992	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S125-311R-5	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_00144730	2088090015	Soil	MCIACELGYWAMXALEAERNAAKKNNAVDHPAFSCEPGVEGAEPSPAPRVQRTVDEPGP
SwRhRL2b_0149.00004270	2162886007	Switchgrass Rhizosphere	MCIACELGYWAMVDALEAERNAAKKSIAVEDPSFTCEPGAEEAEPSSALRVQRTVDEPAP
ICCgaii200_11135472	2228664021	Soil	MVDALEAERNAAKKSITAEDPSFACEPGAEGTEPSPAPHGQRTSDEPAP
JGI11643J12802_111852712	3300000890	Soil	IACELGYWAMVDALEAERNAAKKNNAVDHPAFSCEPGVEGAEPSPAPRVQRTVDEPGP*
JGI11615J12901_115349963	3300000953	Soil	MCIACELGYWAMIDALEAERDAAKKNIAAGDPVFACEPAGEKVEAEPARPAQQAVGEPTP
JGI10220J13317_111792032	3300001139	Soil	MCIACELGYWAMVDALEAERNAAKKSIAVEDPSFTCEPGAEEAEPSSALRVQRTVDEPSP
JGI24741J21665_10341003	3300001915	Corn Rhizosphere	MCIACELGYWAMVDALEAERNAAKKNNAGDHPAFSCEPEAEPSPAPRVQRT
JGI24751J29686_100277991	3300002459	Corn, Switchgrass And Miscanthus Rhizosphere	VDALEAERNAAKKNNAGDHPAFSCEPEAEPSPAPRVQRTADEPAP*
JGI26145J50221_10391612	3300003371	Arabidopsis Thaliana Rhizosphere	MCIACELGYWAMVDALEAERNAAKKSIAVEDPSFTCEPGAEEAEPSSALR
JGI25405J52794_100949482	3300003911	Tabebuia Heterophylla Rhizosphere	MIDALEAERNAAKKNIAVEDPIFACTPAADEAAPSPAQHAKRTVDEQAP*
Ga0055435_100202844	3300003994	Natural And Restored Wetlands	MCIACELGYWAMVDALEAERNAAKKSITVEDPSFACEPSAEGAEPTPAPRVQRTVDESAS
Ga0055500_101260672	3300004062	Natural And Restored Wetlands	MCIACELGYWAMVDALEAERNAGKKSITVEDRSFACEPSAEGAEPSPAPRVQRTVDESAS
Ga0055488_101061192	3300004070	Natural And Restored Wetlands	MCIACELGYWAMVDALEVERNAAKKSITVEDPSFACEPSAEGAEPSPAPRVQRTVDESAS
Ga0062593_1022837272	3300004114	Soil	MCIACELGYWAMVDALEAERKAADKNATVGDPSFACEPGVEEVDPSPAPRVQRTADEPAP
Ga0062593_1026651331	3300004114	Soil	MCIACELGYWAMVDALEAERDAAPQNAADPVFVCEPGTEKAEPETAPRAQRTVDEPTP*
Ga0062593_1026651341	3300004114	Soil	MCIACELGYWAMVDALEAERSAARQNVADPVFACEPGTEKVEPETAPGAPRTVDEPTP*
Ga0055489_102631831	3300004145	Natural And Restored Wetlands	VDALEVERNAAKKSITVEDPSFACEPSAEGAEPSPAPRVQRTVDESAS*
Ga0062590_1018059892	3300004157	Soil	MCIACELGYWAMVDALEAERNAPKKSISVEDPSFACEPSAEGTEPSPAPRVQRTVDESAS
Ga0063356_1025042141	3300004463	Arabidopsis Thaliana Rhizosphere	MVDALEAERNAAKKGFTVEDPFFACEPSAEGTEPSRAPRPQRTVDESAS*
Ga0062595_1006907961	3300004479	Soil	MCIACELGYWAMVDALEAERKAADKNATVGDPSFACEPGVEEADPSPAPRVQRTADEPAP
Ga0062595_1015460082	3300004479	Soil	MCIACELGYWAMVDALEAERNAAKKSITAEDPSFACEPGAEGTEPSPAPHGQRTADEPAP
Ga0062594_1018738362	3300005093	Soil	MCIACELGYWAMVDAIEAERNGAKKNNAVDHPAFSCEPGVEGPEPGPTPRVQRTADEPAP
Ga0066817_10023152	3300005146	Soil	MCIACELGYWAMVDALEAERNAAKKSIAVEDPSFACEPGAERAEPSPAPRVQRAADEPAP
Ga0066814_100085821	3300005162	Soil	YWAMVDALEAERNAAKKSIAVEDPSFACEPGAERAEPSPAPRVQRAADEPAP*
Ga0066814_100616211	3300005162	Soil	MCLACELGYWAMVDALEAERNAAKKNIAVGDPSFACEPGAEGAEPSPAPSVQRTVDEPAP
Ga0066815_100157183	3300005164	Soil	MCIACELGYWAMVDALEAERNAAKKSVAAEDPSFACEPGAEEAEPSSAPRVQRTVDEPAP
Ga0066810_100165062	3300005169	Soil	MCLACELGYWAMVDALEAERNAAKKSIAVEDPSFACEPGAEGAEPSPAPRVQRAADEPAP
Ga0066810_101853631	3300005169	Soil	ACELGYWAMVDALEAERNAAKKSVAAEDPSFACEPGAEEAEPSSAPRVQRTVDEPAP*
Ga0070690_1006492901	3300005330	Switchgrass Rhizosphere	MCIACELGYWAMVDALEAERKAADKNAPVGDPSFACEPGAEEADPSPAPRVQRTADEPAP
Ga0066388_1001725872	3300005332	Tropical Forest Soil	MCIACELGYWAMVDALEAERDAAKKRAAVEAPTFACEPGAGEVTPSSAERPQRTVDEQAP
Ga0066388_1032831442	3300005332	Tropical Forest Soil	MVDALEAEREGAKKKSAVEDPTFACEPDADEVTPSPVKPTGRTVDESAP*
Ga0066388_1060058042	3300005332	Tropical Forest Soil	MCIACELGYWAMIDALEAERSAAKKNIAVEDPTFACTPAADEAAPSPAQHAKRTVDEQTP
Ga0070703_101064452	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MCIACELGYWAMVDALEAERNAAKKNNAGDHPAFSCEPEAEPSPAPRVQRTADEPAP*
Ga0070698_1012035792	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MCIACELGYWAMVDALEAERNAAKKSTAVEDPSFTCEPGAEEAEPSSALRVQRTVDEPAP
Ga0070679_1004845592	3300005530	Corn Rhizosphere	MCIACELGYWAMVDALEAERNFAKKSTAVEGPSFTCEPGAKEAEPSPSPRAQRAVDEPAP
Ga0066905_1007517332	3300005713	Tropical Forest Soil	MCIACELGYWAMVDALEAERDAAKKRAAVEAPTFACEPGAGEVTPSSAERPQRTVDEQTP
Ga0066905_1014536152	3300005713	Tropical Forest Soil	MCIACELGYWAMVDALEAERDAAKKRTAVEDPTFACEPGAGEVTPSPAERPKRTVDEQAP
Ga0066903_1052375622	3300005764	Tropical Forest Soil	MCIACELGYWAMVDALEAERNFAKKSTAVEGSSFTCEPGAEEAEPSPSPPAQRAVDEPAP
Ga0068860_1001722264	3300005843	Switchgrass Rhizosphere	MVDALEAERKAADKNATVGDPSFACEPGVEEADPSPAPRVQRTADEPAP*
Ga0075367_104918791	3300006178	Populus Endosphere	LGYWAMVDALEAERNFAKKSTAVEGPSFTCEPGAEEAEPSPSPRAQRAVDEPAP*
Ga0075366_109499792	3300006195	Populus Endosphere	LGYWAMVDALEAERNAAKKNNAGDHPAFSCEPEAEPSPAPRVQRTADEPAP*
Ga0074056_117128242	3300006574	Soil	MCIACELGYWVMVDALEAERYAAKKSIAVEDPSFACEPGAERAEPSPAPRVQRAADEPAP
Ga0074054_120501801	3300006579	Soil	MCIACELGYWAMVDALEAERNAAKKSIAVEDPSFACEPGAEEAEPSSAPRVQRTVDEPAP
Ga0074054_121592251	3300006579	Soil	LEAERNAAKKNIAVGDPSFACEPGAEGAEPSPAPRVQRAADEPAP*
Ga0074048_100748692	3300006581	Soil	WAMVDALEAERNAAKKSIAVEDPSFACEPGAERAEPSPAPRVQRAADEPAP*
Ga0075425_1002217812	3300006854	Populus Rhizosphere	MCIACELGYWAMVDALEAERNAAKRKIVAEGPTFACEPGADEVAPSPPQRTVDEPAP*
Ga0075434_1006889101	3300006871	Populus Rhizosphere	MVDALEAERNAAKKSIAVEDPSFTCEPGAEEAEPSSALRVQRTVDEPAP*
Ga0079219_104774242	3300006954	Agricultural Soil	RADERGQLLSGAKGGGVMCIACELGYWAMVDALEAERNAAKGTTVKDPSFACEPSVEETESSPAPRAQQTVDEPAP*
Ga0075435_1001278211	3300007076	Populus Rhizosphere	KKNNAGDHPAFSCEPEAEPSPAPRVQRTADEPAP*
Ga0075435_1006585771	3300007076	Populus Rhizosphere	MCIACELGYWAMVDALEAERNAAKKSIAVEDPSFTCEPGAEEAEPSSALRVQRTVDEPA
Ga0105245_118659123	3300009098	Miscanthus Rhizosphere	MCIACELGYWAMVDALEAERNAAKKSIAVEDPSFTCEPGAEEAEPSSALRVQR
Ga0075423_105750522	3300009162	Populus Rhizosphere	MCIACELGYWAMVDALEAERNAAKKSVAAEDPSFACEPGAEEAEPSSAPRVQRTVDESAP
Ga0075423_131438181	3300009162	Populus Rhizosphere	MVDALEAERNAAKRKIVAEGPTFACEPGADEVAPSPPQRTVDEPAP*
Ga0105241_121609072	3300009174	Corn Rhizosphere	MCIACELGYWAMVDALEAERNFAKKSTAVEGPSFTCEPGAEEAEPSPSPPAQ
Ga0105242_102943433	3300009176	Miscanthus Rhizosphere	MCIACELGYWAMVDALEAERNAAKKGIAVEDPSFTCEPGAEEAEPSSALRVQRT
Ga0105238_101076274	3300009551	Corn Rhizosphere	MCIACELGYWAMVDALEAERNAAKKSIAVEDPSFTCEPGAEEAEPSSALRVQRTVDE
Ga0126377_1000389511	3300010362	Tropical Forest Soil	MCIACELGYWAMVDALEAERNSAKKSIAVENPSFACEPGAEEAEPSPAPRPQRTADEPAP
Ga0126377_102249152	3300010362	Tropical Forest Soil	MCIACELGYWAMVDALEAERDAAKKKPAVAESTFACEPVVDEAAQRPQRTVDEPAP*
Ga0126377_115300022	3300010362	Tropical Forest Soil	MCIACELGYWAMVDALEAERDAAKKRTAVEDPTFACEPGAGEVTPSSAERPQRTVDEQAP
Ga0134125_109984982	3300010371	Terrestrial Soil	MCIACELGYWAMVDALEAERAAAKKKATLDDSVFACEPNAEGDGSKPTGLAQRTVDEPTP
Ga0134125_113872773	3300010371	Terrestrial Soil	MCIACELGYWAMVDALEAERDAAPQNAADPVFVCEPGTEKAEPETAPRAQRTVDEPT
Ga0134124_102846042	3300010397	Terrestrial Soil	VDALEAERKAADKNATVGDPSFACEPGVEEADPSPAPRVQRTADEPAP*
Ga0157356_10285262	3300012474	Unplanted Soil	MCIACELGYWAMVDALEAERNAAKKSIAVEDPSFTCEPGAEEAEPSSALRVQ
Ga0157344_10136021	3300012476	Arabidopsis Rhizosphere	MCIACELGYWAMVDALEAERNAAKKGLTVEDPSFACEPSAEGTESSPAPRVQRTVDESAS
Ga0157349_10009812	3300012489	Unplanted Soil	MCIACELGYWVMVDALEAERNAAKKSIAVEDPSFTCEPGAEEAEPSSALRVQRTVDEPAP
Ga0157353_10005733	3300012496	Unplanted Soil	MVDALEAERNAAKKSIAVDDSSFVCTPAADEAELSPAPRAQRTVDEPAP*
Ga0157286_103228112	3300012908	Soil	MCIACELGYWAMVDALEAERNAAKKSIAVEDPSFTCEPGAEEAEPSSAL
Ga0157308_103291991	3300012910	Soil	MCIACELGYWAMVDALEAERDAAPQNAADPVFVCEPGTEKAEPETAPR
Ga0164241_103347172	3300012943	Soil	MCIACELGYWAMVDALEAERSAARQNADDPVFACEPGPEKAEPETAPPAQRTVDEPTP*
Ga0164304_101535672	3300012986	Soil	LLGAEGGRVMCIACELGYWAMVDALEAERNAAKKNNAGDHAAFSCEPGFEEAEPSPAPRVQRTADEPAP*
Ga0075303_10332641	3300014299	Natural And Restored Wetlands	MVDALEAERNAAKKSITVEDPSFACEPSAEGAEPTPAPRVQRTVDES
Ga0132258_110775474	3300015371	Arabidopsis Rhizosphere	ERADERRQLLPGAEGGGVMCIACELGYWAMVDALEAERIAANKNATVGDPSFACEPGVEEAEPSPAPRVQRMADEPAP*
Ga0132255_1000459992	3300015374	Arabidopsis Rhizosphere	MVDALEAERNAAKKSIAVEDPSFACEPGAERAEPSPAPRVQRAADEPAP*
Ga0132255_1000826085	3300015374	Arabidopsis Rhizosphere	MCIACELGYWAMVDALEAERNAAKKSIAVDDSSFVCTPAADEAERSPAPRAQRTVDEPAP
Ga0132255_1002948012	3300015374	Arabidopsis Rhizosphere	MCIACELGYWAMVDALEAERKAADKNATVGDPSFACEPGVEEAEPSPAPRVQRMADEPAP
Ga0132255_1047726501	3300015374	Arabidopsis Rhizosphere	MCIACELGYWAMVDALEAERNAAKKGLTVEDPSFACEPSAEGTESSPAPRVQRTVDGSAS
Ga0173481_100015205	3300019356	Soil	MCIACELGYWAMVDALEAERNAAKKNNAGDHPAFSCEPEAEPSPAPRVQRTADEPAP
Ga0247799_10366822	3300023072	Soil	MCIACELGYWAMVDALEAERDAAPQNAADPVFVCEPGTEKAEPETAPRAQRTVDEPTP
Ga0207666_10012733	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MCIACELGYWAMVDALEAERNAAKKGIAVEDPSFTCEPGAEEAEPSSALRVQRTVDEPAP
Ga0207656_104909451	3300025321	Corn Rhizosphere	AMVDALEAERNAAKKSIAVEDPSFTCEPGAEEAEPSSALRVQRTVDEPAP
Ga0210094_11029041	3300025549	Natural And Restored Wetlands	MCIACELGYWAMVDALEVERNAAKKSITVEDPSFACEPSAEGAEPSPAPRAQRTVDESAS
Ga0210138_11524322	3300025580	Natural And Restored Wetlands	MCIACELGYWAMVDALEAERNAAKKSITVEDPSFACEPSAEGAEPSPAPRVQRTVDESAS
Ga0207649_110741573	3300025920	Corn Rhizosphere	MCIACELGYWAMVDALEAERKAADKNATVGDPSFACEPGVEEADPSPAPRVQRT
Ga0207679_103333352	3300025945	Corn Rhizosphere	MCIACELGYWAMVDALEAERNFAKKSTAVEGPSFTCEPGAEEAEPSPSPRAQRAVDEPAP
Ga0207494_1009081	3300026690	Soil	ELGYWAMVDALEAERNAAKKSIAVEDPSFTCEPGAEEAEPSSALRVQRTVDEPAP
Ga0207439_1032961	3300026740	Soil	ACELGYWAMVDALEAERNAAKKNNAGDHPAFSCEPEAEPSPAPRVQRTADEPAP
Ga0207594_1031071	3300026751	Soil	AMVDALEAERNAAKKNNAGDHPAFSCEPEAEPSPAPRVQRTADEPAP
Ga0207469_1021452	3300026767	Soil	GYWAMVDALEAERNAAKKSIAVEDPSFTCEPGAEEAEPSSALRVQRTVDEPAP
Ga0207502_1029253	3300026828	Soil	MCIACELGYWAMVDALEAERNAAKKNNAGDHPAFSCEPEAEPSPAPR
Ga0207475_10000863	3300026867	Soil	MVDALEAERNAAKKNNAGDHPAFSCEPEAEPSPAPRVQRTADEPAP
Ga0207519_1033081	3300027411	Soil	MCIACELGYWAMVDALEAERNAAKKGFTVEDPFFACEPSAEGTEPSRAPRPQRTVD
Ga0209971_10707782	3300027682	Arabidopsis Thaliana Rhizosphere	MCIACELGYWTMVDALEAERNAAKKSITVEDPSFACEPSAEGTEPSPAPRVQRTMDEPAS
Ga0247750_10178321	3300027992	Soil	MVDALEAERNAAKKSIAVEDPSFTCEPGAEEAEPSSALRVQRTVDEPAP
(restricted) Ga0255311_10004774	3300031150	Sandy Soil	MCIACELGYWAMVDALEAERNAAKKSNAVDHPAFSCEPGVEGAEPGPAPRVQRTADEPGP
(restricted) Ga0255311_11157322	3300031150	Sandy Soil	MCIACELGYWAMVDALEAERNAATKSIAVEDPSFACEPGAEEAEPSSAPRVQRTVDEPAP
Ga0307497_100238472	3300031226	Soil	MCIACELGYWAMVDALEAERNAAKKSIAVEDPSFTCEPDAEEAEPSSAPRVQRTVDEPAP
(restricted) Ga0255312_10005752	3300031248	Sandy Soil	MCIACELGYWAMVDAIEAERNAAKKNNAVDHLAFSCEPGGEGAEPSPAPRVQRTADEPGP
Ga0310888_100167255	3300031538	Soil	MCIACELGYWAMVDALEAERNAAKKGIAVEDPSFTCEPGAEEAEPSSAPRVQRTVDESAP
Ga0310888_108656221	3300031538	Soil	MCIACELGYWALVDALEAERNAAKKSIAVEDPSFTCEPGAEEAEPSSALRVQRTVDEPAP
Ga0310887_100451793	3300031547	Soil	GGRRIILGYWAMVDALEAERNAAKKSIAVEDPSFACEPGAERAEPSPAPRVQRAADEPAP
Ga0307469_104036202	3300031720	Hardwood Forest Soil	MCIACELGYWAMIDALEAERNAAKKNIAVEDAIFACTPAADEAAPSPAQHAQRTVDEQAP
Ga0307468_1001817682	3300031740	Hardwood Forest Soil	MCIACELGYWAMIDALEAERNAAKKNIAAEGPIFACTPVADEAAPSPAQHAQRTVDEQTP
Ga0310907_101266882	3300031847	Soil	MCIACELGYWAMVDALEAERNAAKKSIAVEDPSFACEPGAEGAEPSPAPRVQRAADEPAP
Ga0310893_100103691	3300031892	Soil	GYWAMVDALEAERNAAKKGIAVEDPSFTCEPGAEEAEPSSALRVQRTVDEPAP
Ga0310901_105415232	3300031940	Soil	PMCIACELGYWAMVDALEAERNAAKKSIAVEDPSFACEPGAERAEPSPAPRVQRAADEPA
Ga0307471_1013675392	3300032180	Hardwood Forest Soil	MCIACELGYWAMIDALEAERNAAKKNIAVEGPIFACTPVADEAAPIPAQHAQRTVDEQAP
Ga0310812_100055822	3300032421	Soil	MCIACELGYWTMVDALEAERNAAKKGFTVEDPFFACEPSAEGTEPSRAPRPQRTVDESAS
Ga0310812_100434931	3300032421	Soil	CELGYWAMVDALEAERKAADKNATVGDPSFACEPGVEEADPSPAPRVQRTADEPAP
Ga0373959_0020632_1_144	3300034820	Rhizosphere Soil	MCIACELGYWAMVDALEAERNAAKKNNAGDHPAFSCEPEAEPSPAPRV

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters