Metagenome / Metatranscriptome Family F088774

Basic Information
Family ID	F088774
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	53 residues
Representative Sequence	VGTTVQADAKFLRRIFLGLVFLTLVTGGLAGLTTVQAMTGAAGNCSVSCD
Number of Associated Samples	99
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.06 %
% of genes near scaffold ends (potentially truncated)	19.27 %
% of genes from short scaffolds (< 2000 bps)	79.82 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Most Common Taxonomy
Group	Bacteria (76.147 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (10.092 % of family members)
Environment Ontology (ENVO)	Unclassified (21.101 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (28.440 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 58.97% β-sheet: 0.00% Coil/Unstructured: 41.03%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00330	Aconitase	39.45
PF06262	Zincin_1	35.78
PF00155	Aminotran_1_2	3.67
PF01118	Semialdhyde_dh	1.83
PF03547	Mem_trans	1.83
PF03841	SelA	0.92
PF04412	AcnX	0.92
PF01027	Bax1-I	0.92
PF00694	Aconitase_C	0.92
PF13472	Lipase_GDSL_2	0.92
PF14279	HNH_5	0.92
PF05940	NnrS	0.92
PF01176	eIF-1a	0.92
PF00252	Ribosomal_L16	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG3824	Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain	Posttranslational modification, protein turnover, chaperones [O]	35.78
COG0679	Predicted permease, AEC (auxin efflux carrier) family	General function prediction only [R]	1.83
COG0197	Ribosomal protein L16/L10AE	Translation, ribosomal structure and biogenesis [J]	0.92
COG0361	Translation initiation factor IF-1	Translation, ribosomal structure and biogenesis [J]	0.92
COG1679	Mevalonate 5-phosphate dehydratase subunit 1, aconitase superfamily (modified mevalonate pathway)	Lipid transport and metabolism [I]	0.92
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.92
COG3213	Nitric oxide response protein NnrS	Signal transduction mechanisms [T]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.90 %
Unclassified	root	N/A	21.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.90 %
Unclassified	root	N/A	21.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.15 %
Unclassified	root	N/A	21.10 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.75 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	60.55 %
Unclassified	root	N/A	21.10 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.92 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.92 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.80 %
Unclassified	root	N/A	21.10 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.92 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	47.71 %
Unclassified	root	N/A	21.10 %
Vibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales	0.92 %
Fungi incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis	0.92 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.10 %
Aestuariivirgaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae	14.68 %
Kaistiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae	0.92 %
Mucoromycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota	0.92 %
Devosiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	0.92 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.92 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.10 %
Aestuariivirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga	14.68 %
Bauldia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia	0.92 %
Mucoromycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina	0.92 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.92 %
Devosia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia	0.92 %
Vibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.10 %
Aestuariivirga litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	14.68 %
Endogonomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes	0.92 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.92 %
Vibrio cholerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio cholerae	0.92 %
Devosia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.10 %
Aestuariivirga litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	14.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	0.92 %
Endogonales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales	0.92 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %
Vibrio cholerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio cholerae	0.92 %
Devosia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.10 %
Aestuariivirga litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	14.68 %
Endogonales incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis	0.92 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	0.92 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %
Vibrio cholerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio cholerae	0.92 %
Devosia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.10 %
Aestuariivirga litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	14.68 %
Bifiguratus	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis → Bifiguratus	0.92 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	0.92 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %
Vibrio cholerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio cholerae	0.92 %
Devosia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.10 %
Aestuariivirga litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	14.68 %
Bifiguratus adelaidae	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis → Bifiguratus → Bifiguratus adelaidae	0.92 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	0.92 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %
Vibrio cholerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio cholerae	0.92 %
Devosia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100533452	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100533502	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300000883\|EsDRAFT_10019331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2608	Open in IMG/M
3300000883\|EsDRAFT_10187062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1249	Open in IMG/M
3300000956\|JGI10216J12902_120273277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	649	Open in IMG/M
3300001213\|JGIcombinedJ13530_100923417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	1591	Open in IMG/M
3300001213\|JGIcombinedJ13530_104817313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	849	Open in IMG/M
3300001849\|RCM26_1161052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1419	Open in IMG/M
3300002184\|JGI24770J26754_10000140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	47251	Open in IMG/M
3300002856\|draft_11269500	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300003541\|JGI20214J51650_10952151	Not Available	599	Open in IMG/M
3300004778\|Ga0062383_10005185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3984	Open in IMG/M
3300005758\|Ga0078117_1005596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1006	Open in IMG/M
3300005833\|Ga0074472_10993906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	638	Open in IMG/M
3300005833\|Ga0074472_11458352	Not Available	1752	Open in IMG/M
3300006092\|Ga0082021_1206130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17782	Open in IMG/M
3300006641\|Ga0075471_10044809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2484	Open in IMG/M
3300006875\|Ga0075473_10011028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3510	Open in IMG/M
3300006917\|Ga0075472_10041906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2158	Open in IMG/M
3300007216\|Ga0103961_1282070	All Organisms → cellular organisms → Bacteria → Proteobacteria	1243	Open in IMG/M
3300007585\|Ga0102916_1047872	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300007593\|Ga0102918_1132463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	748	Open in IMG/M
3300007632\|Ga0102894_1093541	Not Available	790	Open in IMG/M
3300007658\|Ga0102898_1163623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	525	Open in IMG/M
3300009037\|Ga0105093_10231477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	961	Open in IMG/M
3300009075\|Ga0105090_10430384	Not Available	803	Open in IMG/M
3300009120\|Ga0117941_1004232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4329	Open in IMG/M
3300009142\|Ga0102885_1143841	Not Available	582	Open in IMG/M
3300009158\|Ga0114977_10769095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	509	Open in IMG/M
3300009235\|Ga0103857_10053736	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	769	Open in IMG/M
3300009430\|Ga0114938_1080457	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300009540\|Ga0073899_10349395	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300009768\|Ga0116193_1413752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300009870\|Ga0131092_10286658	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300009870\|Ga0131092_10542378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1033	Open in IMG/M
3300009873\|Ga0131077_10056406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5371	Open in IMG/M
3300010051\|Ga0133939_1119144	Not Available	1647	Open in IMG/M
3300010348\|Ga0116255_10634628	Not Available	687	Open in IMG/M
3300010354\|Ga0129333_10021757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6089	Open in IMG/M
3300010885\|Ga0133913_10090133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	8220	Open in IMG/M
3300010885\|Ga0133913_10438209	All Organisms → cellular organisms → Bacteria	3450	Open in IMG/M
3300012171\|Ga0137342_1051961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	828	Open in IMG/M
3300012212\|Ga0150985_108538638	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300012212\|Ga0150985_115847328	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300012469\|Ga0150984_100704904	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300013005\|Ga0164292_10076027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2577	Open in IMG/M
3300014266\|Ga0075359_1121111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	558	Open in IMG/M
3300014316\|Ga0075339_1222435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia	538	Open in IMG/M
(restricted) 3300014720\|Ga0172376_10282698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1000	Open in IMG/M
3300014884\|Ga0180104_1108277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	796	Open in IMG/M
3300017789\|Ga0136617_11065702	Not Available	611	Open in IMG/M
3300018031\|Ga0184634_10515350	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300018077\|Ga0184633_10156108	Not Available	1183	Open in IMG/M
3300018084\|Ga0184629_10301245	Not Available	843	Open in IMG/M
3300018465\|Ga0190269_11742725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	528	Open in IMG/M
3300019360\|Ga0187894_10356883	Not Available	659	Open in IMG/M
3300019767\|Ga0190267_10238053	All Organisms → cellular organisms → Eukaryota	889	Open in IMG/M
3300020052\|Ga0181554_1286025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	625	Open in IMG/M
3300020155\|Ga0194050_1010246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2689	Open in IMG/M
3300020193\|Ga0194131_10048740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2910	Open in IMG/M
3300020229\|Ga0194042_1029918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1436	Open in IMG/M
3300021079\|Ga0194055_10086533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1461	Open in IMG/M
(restricted) 3300023208\|Ga0233424_10135752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1034	Open in IMG/M
3300024343\|Ga0244777_10564934	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300024346\|Ga0244775_11347315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	551	Open in IMG/M
3300025130\|Ga0209594_1053804	Not Available	1287	Open in IMG/M
3300025732\|Ga0208784_1002708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6961	Open in IMG/M
3300025872\|Ga0208783_10051827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1882	Open in IMG/M
3300026303\|Ga0209793_1051623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	906	Open in IMG/M
3300026893\|Ga0209883_1017303	Not Available	500	Open in IMG/M
3300027754\|Ga0209596_1341536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	581	Open in IMG/M
3300027831\|Ga0209797_10235585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	772	Open in IMG/M
3300027870\|Ga0209023_10000348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	74145	Open in IMG/M
3300027870\|Ga0209023_10071691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2541	Open in IMG/M
3300027870\|Ga0209023_10123354	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300027897\|Ga0209254_10032785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4642	Open in IMG/M
(restricted) 3300028569\|Ga0247843_1331888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	511	Open in IMG/M
3300028679\|Ga0302169_10190067	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300029242\|Ga0168113_1054851	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300030294\|Ga0311349_11752313	Not Available	574	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10122304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	707	Open in IMG/M
3300031232\|Ga0302323_100948866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	953	Open in IMG/M
3300031251\|Ga0265327_10027276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3291	Open in IMG/M
3300031481\|Ga0314816_1047079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	573	Open in IMG/M
3300031784\|Ga0315899_10030047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5735	Open in IMG/M
3300031784\|Ga0315899_11182331	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300031786\|Ga0315908_11279668	Not Available	579	Open in IMG/M
3300031787\|Ga0315900_10258315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio cholerae	1481	Open in IMG/M
3300031951\|Ga0315904_10582014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	968	Open in IMG/M
3300031963\|Ga0315901_10827206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	668	Open in IMG/M
3300032002\|Ga0307416_101817094	Not Available	713	Open in IMG/M
3300032050\|Ga0315906_10548121	Not Available	966	Open in IMG/M
3300032092\|Ga0315905_10195619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1994	Open in IMG/M
3300032164\|Ga0315283_11176851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	802	Open in IMG/M
3300032397\|Ga0315287_12800105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	516	Open in IMG/M
3300033233\|Ga0334722_10080645	All Organisms → cellular organisms → Bacteria → Proteobacteria	2498	Open in IMG/M
3300034018\|Ga0334985_0505041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	696	Open in IMG/M
3300034021\|Ga0335004_0255370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1060	Open in IMG/M
3300034104\|Ga0335031_0256893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1156	Open in IMG/M
3300034109\|Ga0335051_0399119	Not Available	652	Open in IMG/M
3300034114\|Ga0364938_120411	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis → Bifiguratus → Bifiguratus adelaidae	523	Open in IMG/M
3300034118\|Ga0335053_0559107	Not Available	665	Open in IMG/M
3300034122\|Ga0335060_0596095	Not Available	556	Open in IMG/M
3300034127\|Ga0370489_0027619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1612	Open in IMG/M
3300034159\|Ga0370509_0120838	Not Available	899	Open in IMG/M
3300034165\|Ga0364942_0245985	Not Available	584	Open in IMG/M
3300034177\|Ga0364932_0068845	Not Available	1337	Open in IMG/M
3300034178\|Ga0364934_0068260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis	1322	Open in IMG/M
3300034280\|Ga0334997_0413991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	854	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.32%
Engineered	Engineered	10.09%
Host-Associated	Host-Associated	4.59%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	67.89%
Terrestrial	Environmental → Terrestrial	17.43%
Wastewater	Engineered → Wastewater	9.17%
Plants	Host-Associated → Plants	4.59%
Biotransformation	Engineered → Biotransformation	0.92%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	43.12%
Marine	Environmental → Aquatic → Marine	17.43%
Soil	Environmental → Terrestrial → Soil	10.09%
Sediment	Environmental → Aquatic → Sediment	7.34%
Activated Sludge	Engineered → Wastewater → Activated Sludge	4.59%
Floodplain	Environmental → Terrestrial → Floodplain	3.67%
Peat	Environmental → Terrestrial → Peat	2.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.83%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	1.83%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	1.83%
Cave	Environmental → Terrestrial → Cave	0.92%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	0.92%
Microbial Solubilization Of Coal	Engineered → Biotransformation → Microbial Solubilization Of Coal	0.92%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	22.02%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	8.26%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	8.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.34%
Coastal	Environmental → Aquatic → Marine → Coastal	5.50%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.59%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	4.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.67%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	3.67%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.75%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.75%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.83%
Sand	Environmental → Terrestrial → Soil → Sand	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.83%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	1.83%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.92%
Ice	Environmental → Aquatic → Freshwater → Ice	0.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.92%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	0.92%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified	0.92%
Biological Phosphorus Removal	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal	0.92%
Unclassified	Engineered → Biotransformation → Microbial Solubilization Of Coal → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	19.27%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	8.26%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	7.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.34%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.50%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	4.59%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	3.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.67%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	3.67%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.75%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.75%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	2.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.83%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.83%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	1.83%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.92%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.92%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.92%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	0.92%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified	0.92%
Bioreactor	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor	0.92%
Unclassified	Engineered → Biotransformation → Microbial Solubilization Of Coal → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.09%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	7.34%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	5.50%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.59%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	3.67%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.67%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	3.67%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	2.75%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.75%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	2.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.75%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.83%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.83%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.83%
Freshwater And Marine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Freshwater And Marine	1.83%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.83%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.83%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	1.83%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	1.83%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.92%
Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water	0.92%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.92%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.92%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	0.92%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.92%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.92%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.92%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.92%
Lake Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment	0.92%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.92%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.92%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.92%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.92%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.92%
Wastewater Treatment Plant	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater Treatment Plant	0.92%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Industrial Wastewater	0.92%
Sludge	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Sludge	0.92%
Wastewater Treatment	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor → Wastewater Treatment	0.92%
Hydrocarbon Resource Environments	Engineered → Biotransformation → Microbial Solubilization Of Coal → Unclassified → Unclassified → Hydrocarbon Resource Environments	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000883	Estuary microbial communities from the Columbia River - 5 PSU	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001849	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM26, ROCA_DNA190_2.0um_MCP-N_C_2b	Environmental	Open in IMG/M
3300002184	Freshwater and sediment microbial communities from Lake Erie, Canada	Environmental	Open in IMG/M
3300002856	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Tailing Pond Surface TP_surface	Engineered	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005758	Cyanobacteria communities in tropical freswater systems - freshwater lake in Singapore	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006092	Activated sludge microbial communities from wastewater treatment plant in Ulu Pandan, Singapore	Engineered	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300007216	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface and Bottom layer) 16 sequencing projects	Environmental	Open in IMG/M
3300007585	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-3	Environmental	Open in IMG/M
3300007593	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3	Environmental	Open in IMG/M
3300007632	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-3	Environmental	Open in IMG/M
3300007658	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-3	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009120	Lake sediment microbial communities from Tanners Lake, St. Paul, MN	Environmental	Open in IMG/M
3300009142	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-3	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009235	Microbial communities of water from Amazon river, Brazil - RCM10	Environmental	Open in IMG/M
3300009430	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring	Environmental	Open in IMG/M
3300009540	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB5-Ph	Engineered	Open in IMG/M
3300009768	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC115_MetaG	Engineered	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010051	Industrial wastewater microbial communities from reactors of effluent treatment plant in South Killingholme, Immingham, England. Combined Assembly of Gp0151195, Gp0151196	Engineered	Open in IMG/M
3300010348	AD_HKYLca	Engineered	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012171	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT466_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300014266	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D1	Environmental	Open in IMG/M
3300014316	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D1	Environmental	Open in IMG/M
3300014720 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35m	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020052	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011503CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020155	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L239-10m	Environmental	Open in IMG/M
3300020193	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120m	Environmental	Open in IMG/M
3300020229	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-12m	Environmental	Open in IMG/M
3300021079	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-9m	Environmental	Open in IMG/M
3300023208 (restricted)	Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_125_MG	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025130	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring (SPAdes)	Environmental	Open in IMG/M
3300025732	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025872	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026303	Wastewater treatment Type I Accumulibacter community from EBPR Bioreactor in Madison, WI, USA - Reactor 1_2/2/2009_ DNA (SPAdes)	Engineered	Open in IMG/M
3300026893	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_21-May-14 (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300028569 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2017_8m	Environmental	Open in IMG/M
3300028679	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_3	Environmental	Open in IMG/M
3300029242	Sewage sludge microbial communities from sewage treatment plant in Sweden - SWESTP1 - Uppsala-primary/surplus 102	Engineered	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031481	Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_N_R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034109	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158	Environmental	Open in IMG/M
3300034114	Sediment microbial communities from East River floodplain, Colorado, United States - 9_s17	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental	Open in IMG/M
3300034127	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_16	Environmental	Open in IMG/M
3300034159	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_0210_18	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034280	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088774

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1005334524	3300000364	Soil	VGSSVQADAKFLRRVLLGLVLLTLATGAMAALTTVQAMSDGTSICLVFCQ*
INPhiseqgaiiFebDRAFT_1005335021	3300000364	Soil	VGSSVQADAKFLRRVLLGLVLLTLATGGMAALTTVQAMSDVTGTCLVFCQ*
EsDRAFT_100193313	3300000883	Freshwater And Marine	VGTTVQADAKFLRRIFLGLVLMTLLTGGLAGFTTVQAMTGSAGNCAISCE*
EsDRAFT_101870624	3300000883	Freshwater And Marine	ANVKAGAKQFEWGFEVGTTVQADAKFLRRIFLGLVFMTLLSGGLAGLTTVQAMTGSAGNCAISCE*
JGI10216J12902_1202732772	3300000956	Soil	VVAGSVQADAKFLRRVLLGLVLLTLATGVMAGVTAVHAMTEQAGHCVVFCQ*
JGIcombinedJ13530_1009234172	3300001213	Wetland	LILGDIIVSSTLQADAKFLRRVLLGLVLLTVAAGAMAGVTAVQAMTETPDHCVISCQQ*
JGIcombinedJ13530_1048173132	3300001213	Wetland	VIHKFNDCCNHLRGIDVGTSVQADAKFLRRVFLGLVFLTLATGFLAGLTTVQAMTDKTGTCVVLCQ*
RCM26_11610524	3300001849	Marine Plankton	VGSSVQADTKFLRRILFGLVLLTVVTGGMAGLTTVEAMTAKLGACILFCE*
JGI24770J26754_1000014011	3300002184	Freshwater And Sediment	VGTTVQADTKFLRRVLFGLVLLTLATGIMAGLTTVQAMTEKSGQCLMFCQQ*
draft_112695002	3300002856	Hydrocarbon Resource Environments	VGVEVGTTVQADAKFLRRIFMGLVFLTVVTGAMAGFTTVQAMTGAPGACVMFCE*
JGI20214J51650_109521511	3300003541	Wetland	VSTTVQADAKFLRRIFLGLVFLTLLTGGLAGLTTVQAMTGASDTCSVSCD*
Ga0062383_100051853	3300004778	Wetland Sediment	VSNSVQADAKFLRRVLIGMVFLTLVTGAMAGFTTVQAMTEATGTCVFLCQ*
Ga0078117_10055962	3300005758	Lake Water	VGTTVQADAKFLRRIFLGLVLLTLVTGGLAGFTTVQAMTGSAACTAGCE*
Ga0074472_109939062	3300005833	Sediment (Intertidal)	VSNSVQADAKFLRRVLLGMVLLTLVTGGLAGLTTVQAMSEKTQACGTLCQ*
Ga0074472_114583524	3300005833	Sediment (Intertidal)	VGQTVQADAKFLRRVLLGLVLLTLATGGVAGFTTVQAMTEKPGACFVSCE*
Ga0082021_120613014	3300006092	Wastewater Treatment Plant	MQADVKFLRRVLLGLVVLTLFTGGAAAVATVQAKTEVTGQCVVFCND*
Ga0075471_100448092	3300006641	Aqueous	MGFEVGTSVQADAKFLRRIFMALVLLTLATGGMAGFATVQAMTGAPESCTAACD*
Ga0075473_100110285	3300006875	Aqueous	VASTSVQADAKFLRRIFLGLVLLTLVTGGLAGFTTVQAMTGALGTCTTGCE*
Ga0075472_100419063	3300006917	Aqueous	MPTLRLAPTFVWEFSVASTSVQADAKFLRRIFLSLVLLTLVTGGLASFTTVQAMTGTLSTCTTRCE*
Ga0103961_12820702	3300007216	Freshwater Lake	MGSSVQADAVFLRRIFLGLVFLTLVTGVMAGLTTVQAMTGETGACVVFCE*
Ga0102916_10478722	3300007585	Estuarine	VGTTVQADAKFLRRIFLGLVLMTLLTGGLAGFTTVQAMSDSAGNCAISCE*
Ga0102918_11324632	3300007593	Estuarine	VGTTVQADAKFLRRIFLGLVFMTLLSGGLAGLTTVQAMTGSAGNCAISCE*
Ga0102894_10935412	3300007632	Estuarine	VGTTVQADAKFLRRIFLGLVFMTLLSGGLAGLTSVQAMTGSAGNCAISCE*
Ga0102898_11636231	3300007658	Estuarine	VGTTVQADAKFLRRIFLGLVLMTLLTGGLAGFTTVQATTGSAGHCAISCE*
Ga0105093_102314772	3300009037	Freshwater Sediment	VIHKFNHCCKPLRGIDVGSTVQADAKFLRRVFLGLVLLTLATGFLAGLTTVQAMTDKTGTCVLLCQ*
Ga0105090_104303841	3300009075	Freshwater Sediment	VGVEVGTSVQADAKFLRRIFMGLVFLTVVTGAMAGFTTVQAMTGAPGACIMFCE*
Ga0117941_10042325	3300009120	Lake Sediment	VIHKFNHCCKPLRGNDVGSTVQADAKFLRRVFLGLVLLTLATGFLAGLTTVQAMTDKTGTCVLLCQ*
Ga0102885_11438412	3300009142	Estuarine	VGTTVQADAKFLRRIFLGLVLMTLLTGGLAGFTTVQA
Ga0114977_107690952	3300009158	Freshwater Lake	VASSTVQADAKFLRRIFMGLVLLTLVTGGLAGFTTVQAMPGSAASCTGNCE*
Ga0103857_100537362	3300009235	River Water	MPAPTYEWGFEVGTTVQAAAKFLRRIFLGLVLLTLVTGGLAGFTTVQAMTGTLSTCTTGCE*
Ga0114938_10804572	3300009430	Groundwater	VGTSVQADAKFLRRIFMGLVFLTVVTGAMAGLTTVQAMTGAPGACVMFCE*
Ga0073899_103493953	3300009540	Activated Sludge	VGSSVQADAKFLRRVFLGLVFLTLVTGIMAGLTTVQAMTDKTGHCIILCQ*
Ga0116193_14137521	3300009768	Anaerobic Digestor Sludge	MTVGTTVQADAKFLRRIFLGLVLLTLVTGGLAGLTTVQAMTDASVTCTANCE*
Ga0131092_102866583	3300009870	Activated Sludge	VATTVQADAKFLRRIFLGLVFLTLLTGGLAGLTTVQAMTGASGNCTTACD*
Ga0131092_105423782	3300009870	Activated Sludge	VGSTVQADAKFLRRVFMGLVFLTLVTGAMAGLTTVQAMSAKTGHCIILCQ*
Ga0131077_100564067	3300009873	Wastewater	VGSSVQADAKFLRRVFLGLVFLTLVTGIMAGLTTVQAMTDKTGHCIILCP*
Ga0133939_11191444	3300010051	Industrial Wastewater	VATTVQADAKFLRRVFLGLVFLTLVTGGMAGLTTVQAMTGGTGACLMFCQ*
Ga0116255_106346281	3300010348	Anaerobic Digestor Sludge	VGTSVQADAKFLRRIFLGLVFLTLVTGGLAGLTTVQAMTGSPDSC
Ga0129333_100217574	3300010354	Freshwater To Marine Saline Gradient	MGFEVGTSVQADAKFLRRIFMALVLLTLATGGMAGFATVQAMTGVPESCTAACD*
Ga0133913_100901331	3300010885	Freshwater Lake	VASSTVQADAKFLRRIFMGLVLLTLVTGGLAGFTTVQAMTGSAASCTGNCE*
Ga0133913_104382095	3300010885	Freshwater Lake	VATSTVQADAKFLRRIFLGLVFLTLVTGGLAGLTTVQAMTGSAASCASSCE*
Ga0137342_10519612	3300012171	Soil	VNHRLIVLPQFDGSFRVGHTVQADAKFLRRILLGLILLTLVTGGMAGFTTVQAMTDKPGGCLFFCE*
Ga0150985_1085386382	3300012212	Avena Fatua Rhizosphere	QWGFQVGNSVQADAKFLRRIFVGLVFLTVVTGALAGITTVQAMTEAPGACTVLCN*
Ga0150985_1158473282	3300012212	Avena Fatua Rhizosphere	VGNSVQADAKFLRRIFVGLVFLTVVTGALAGITTVQAMTEAPGACTVLCN*
Ga0150984_1007049042	3300012469	Avena Fatua Rhizosphere	MNTVGVQVGNSVQADAKFLRRIFVGLVFLTVVTGALAGITTVQAMTEAPGACTVLCN*
Ga0164292_100760271	3300013005	Freshwater	LWGFDLGTSVQADAKFLRRIFMGLVFLTVVTGAMAGLTTVQAMTGAPGACVMFCE*
Ga0075359_11211112	3300014266	Natural And Restored Wetlands	VSSTVQADAKFLRRIFLGLVFLTLVTGVMAGVTTVQATTGGAG
Ga0075339_12224352	3300014316	Natural And Restored Wetlands	VGVEVGTSVQADAKFLRRIFMGLVFLTVVTGAMAGFTTVQAMTGAPGACVMFCE*
(restricted) Ga0172376_102826982	3300014720	Freshwater	VGVEVGTSVQADAKFLRRIFMGLVFLTVVTGAMAGLTTVQAMTGTTGACVVFCE*
Ga0180104_11082772	3300014884	Soil	VNHRLIVLPQFDGSFRVGHTVQADAKFLRRILLGLILLTLVTGGMAGFTTVQAMTDKPGGCLIFCE*
Ga0136617_110657022	3300017789	Polar Desert Sand	SVQADAKFLRRVLLGLVLLTCVTGGMAGLTTVQAMTESTGYCVLFCQ
Ga0184634_105153502	3300018031	Groundwater Sediment	LPQFDGSFRVGHTVQADAKFLRRVLLGLILLTLVTGGMAGFTTVQAMTDKPGGCLIFCE
Ga0184633_101561083	3300018077	Groundwater Sediment	VNRRLILLPQFDGSFRVGHTVQADAKFLRRVLLGLILLTLVTGGMAGFTTVQAMTDKPGGCLIFCE
Ga0184629_103012452	3300018084	Groundwater Sediment	VGHTVQADAKFLRRVLLGLILLTLVTGGMAGFTTVQAMTDKPGGCLIFCE
Ga0190269_117427251	3300018465	Soil	VGTTVQADAKFLRRIFLGLVLMTLVTGGMAGLTTVQAMTGLNAACTTAVCQ
Ga0187894_103568833	3300019360	Microbial Mat On Rocks	ADAKFLRRVLLGLVLLTLVTGSMAGLTAVQAMTESTGYCVIFCQ
Ga0190267_102380532	3300019767	Soil	VSSTVQADAKFLRRIFMGLVFLTLVTGGMAGLTTAQAL
Ga0181554_12860252	3300020052	Salt Marsh	MPTSRPAPTSEWGFEVGTTVQADAKFLRRIFLGLVFMTLLTGGLAGFTTVQAMTGSAGSCATSCE
Ga0194050_10102463	3300020155	Anoxic Zone Freshwater	VASSTVQADAKFLRRIFMGLVLLTLVTGGLAGFTTVQAMTGSAASCTGNCE
Ga0194131_100487406	3300020193	Freshwater Lake	VGSSVQADTKFFRRILIGLMLLTAATGAMAGLTTVEAMTDKSGACILFCE
Ga0194042_10299183	3300020229	Anoxic Zone Freshwater	VATSTVQADAKFLRRIFLGLVFLTLVTGGLAGLTTVQAMTGSAASCASSCE
Ga0194055_100865333	3300021079	Anoxic Zone Freshwater	MPTSRAAPIFEWGFQVATSTVQADAKFLRRIFLGLVFLTLVTGGLAGLTTVQAMTGSAASCASSCE
(restricted) Ga0233424_101357522	3300023208	Freshwater	VGSSVQADTKFLRRILFGLVLLTIATGGMASLTTVEAMTDKSGACILFCE
Ga0244777_105649343	3300024343	Estuarine	NHCCKPLRGIDVGSTVQADAKFLRRVFLGLVLLTLATGFLAGLTTVQAMTDKTGTCVLLC
Ga0244775_113473151	3300024346	Estuarine	VGTTVQADAKFLRRIFLGLVLMTLLTGGLAGFTTVQAMTGSAGNC
Ga0209594_10538042	3300025130	Groundwater	VGTSVQADAKFLRRIFMGLVFLTVVTGAMAGLTTVQAMTGAPGACVMFCE
Ga0208784_10027089	3300025732	Aqueous	VASTSVQADAKFLRRIFLGLVLLTLVTGGLAGFTTVQAMTGALGTCTTGCE
Ga0208783_100518272	3300025872	Aqueous	MGFEVGTSVQADAKFLRRIFMALVLLTLATGGMAGFATVQAMTGAPESCTAACD
Ga0209793_10516232	3300026303	Wastewater Treatment	VGSSVQADAKFLRRVFLGLVFLTLVTGAMAGLTTVQAMSDKSGACVFFCQ
Ga0209883_10173032	3300026893	Sand	IDVGSTVQADAKFLRRVFLGLVLLTLATGFLAGLTTVQAMTDKTGTCVLLCQ
Ga0209596_13415362	3300027754	Freshwater Lake	MPRLRPAPTFEWGFQVASSTVQADAKFLRRIFMGLVLLTLVTGGLAGFTTVQAMTGSAASCTGNCE
Ga0209797_102355852	3300027831	Wetland Sediment	VSNSVQADAKFLRRVLIGMVFLTLVTGAMAGFTTVQAMTEATGTCVFLCQ
Ga0209023_100003488	3300027870	Freshwater And Sediment	VGTTVQADTKFLRRVLFGLVLLTLATGIMAGLTTVQAMTEKSGQCLMFCQQ
Ga0209023_100716913	3300027870	Freshwater And Sediment	VGTTVQADAKFLRRIFLGLVFLTLLTGGLAGLTTVQAMTGASDSCSVSCD
Ga0209023_101233542	3300027870	Freshwater And Sediment	VGTTVQADAKFLRRIFLGLVLMTLVTGGLAGLTTVQAMTGTPDACTVNCE
Ga0209254_100327855	3300027897	Freshwater Lake Sediment	VIHKFNHCCKPLRGIDVGSTVQADAKFLRRVFLGLVLLTLATGFLAGLTTVQAMTDKTGTCVLLCQ
(restricted) Ga0247843_13318881	3300028569	Freshwater	VGTSVQADAKFLRRIFMGLVFLTVMTGIMAGVTTVQAMTGGPGTCVMFCE
Ga0302169_101900671	3300028679	Fen	PQCKGKNSVGPTVQADAKFLRRVLFGLVLMTLATGAMAGFTTVQAMTEKSGQCLIFCRQ
Ga0168113_10548512	3300029242	Sludge	VGHTVQADAKFLRRVLLGLVFLTLVTGGMAGLTTVQAKSEAAGRCVVLCQ
Ga0311349_117523132	3300030294	Fen	VGPTVQADAKFLRRVLFGLVLMTLATGAMAGFTTVQAMTEKSGQCLIFCRQ
(restricted) Ga0255310_101223042	3300031197	Sandy Soil	VSQTVQADARFLRRVLLGLVLLTLATGGVAGFTTVQAMTEKSGACFVSCE
Ga0302323_1009488663	3300031232	Fen	EWGFQVSTSSVQADAKFLRRIFLGLVLLTLVTGGLAGLTTVQAMTGAATSCTSGCE
Ga0265327_100272764	3300031251	Rhizosphere	VASSSVQADAKFLRRIFLGLVFLTLVTGGLAGFTTVQAMTGSSASCTTNCE
Ga0314816_10470791	3300031481	Soil	VGTTVQADAKFLRRIFLGLVLMTLVTGGMAGLTTVQAMTGLNAACTTAGCQ
Ga0315899_100300478	3300031784	Freshwater	VGSSVQADAKFLRRIFLGLVLLTLATGMAAGVTTVQAMTGMPGSCTLFCD
Ga0315899_111823311	3300031784	Freshwater	RGNDVGSTVQADAKFLRRVFLGLVLLTLATGFLAGLTTVQAMTDKTGTCVLLCQ
Ga0315908_112796682	3300031786	Freshwater	VGTSVQADAKFLRRIFMGLVFLTVVTGAMAGFTTVQAMTGST
Ga0315900_102583152	3300031787	Freshwater	VGTSVQADAKFLRRIFMGLVFLTVVTGAMAGFTTVQAMTGSTGACMVFCE
Ga0315904_105820142	3300031951	Freshwater	LGVEVGTSVQADAKFLRRIFMGLVFLTVVTGAMAGFTTVQAMTGSTGACMVFCE
Ga0315901_108272062	3300031963	Freshwater	VGTSVQADAKFLRRIFIGLVFLTVVTGAMAGFTTVQAMTGSTGACMVFCE
Ga0307416_1018170942	3300032002	Rhizosphere	MGVHVSSTVQADAKFLRRIFIGLVLLTLVTGGMAAFTTVRATTGTAGACVIFCK
Ga0315906_105481211	3300032050	Freshwater	VGTSVQADAKFLRRIFMGLVFLTVVTGAMAGFTTVQAMTGS
Ga0315905_101956194	3300032092	Freshwater	VIHKFNHCCKPLRGNDVGSTVQADAKFLRRVFLGLVLLTLATGFLAGLTTVQAMTDKTGTCVLLCQ
Ga0315283_111768512	3300032164	Sediment	VSTSVQADDKFLRRIFLGLVFMTLVTGGLAGFTTVQAMTGAAASCTSTCE
Ga0315287_128001051	3300032397	Sediment	VATSVQADAKFLRRIFLGLVFLTLVTGGLAGFTTVQAMTGAAGNCSVSCE
Ga0334722_100806455	3300033233	Sediment	VGQTVQADAKFLRRVLLGLVLLTLATGGVAGFTTVQAMTEKPSACFVSCE
Ga0334985_0505041_3_143	3300034018	Freshwater	VQADAKFLRRIFIGLVFLTVVTGAMAGITTVQAMTGGPGACVMFCE
Ga0335004_0255370_672_848	3300034021	Freshwater	MAVFVGYHVSKTVQADARFLRRIFLALVLLTLVTGGIAGFTTVQAMSGLTESCIAACD
Ga0335031_0256893_862_1017	3300034104	Freshwater	MGTSVQADTKFLRRIFLGLVFLTLVTGGMAGFTTVQAMTGQTGACVVFCQP
Ga0335051_0399119_295_447	3300034109	Freshwater	VGSSVQADAKFLRRIFMGLVLLTLATGVMAGVATVQAMTGMPGSCAIFCD
Ga0364938_120411_66_254	3300034114	Sediment	LIVLPQFDGSFRVGHTVQADAKFLRRVLLGLILLTLVTGGMAGFTTVQAMTDKPGGCLIFCE
Ga0335053_0559107_36_200	3300034118	Freshwater	MGFEVGTSVQADAKFLRRIFMALVLLTLATGGMAGFATVQAMTGVPESCTAACD
Ga0335060_0596095_414_554	3300034122	Freshwater	MAVFVGYHVSKTVQADARFLRRIFLALVLLTLVTGGIAGFTTVQAMS
Ga0370489_0027619_1007_1159	3300034127	Untreated Peat Soil	VGTTVQADAKFLRRIFLGLVFLTLVTGGLAGLTTVQAMTGAAGNCSVSCD
Ga0370509_0120838_2_148	3300034159	Untreated Peat Soil	VGTTVQADAKFLRRIFLGLVFLTLVTGGLAGLTTVQAMTGAAGNCSVSC
Ga0364942_0245985_308_487	3300034165	Sediment	MPQFDGSFRVGHTVQADAKFLRRILLGLILLTLVTGGMAGFTTVQAMTDKPGGCLIFCE
Ga0364932_0068845_568_720	3300034177	Sediment	VSQTVQADARFLRRVLLGLVLLTLVTGGVAGFTTVQAMTEKPGACFVSCE
Ga0364934_0068260_10_198	3300034178	Sediment	LILLPQFDGSFRVGHTVQADAKFLRRVLLGLILLTLVTGGMAGFTTVQAMTDKPGGCLIFCE
Ga0334997_0413991_122_274	3300034280	Freshwater	VGTSVQADAKFLRRIFIGLVFLTVVTGAMAGITTVQAMTGAPGACVMFCE

Hidden Markov Model


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