Metagenome / Metatranscriptome Family F088534

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088534
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	101 residues
Representative Sequence	MFSVTLTDPKSFGATYQWAILSVLPMDSDKNRHGLNSPEIKSALGLSNAARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Number of Associated Samples	69
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	28.44 %
% of genes near scaffold ends (potentially truncated)	27.52 %
% of genes from short scaffolds (< 2000 bps)	79.82 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.798 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (23.853 % of family members)
Environment Ontology (ENVO)	Unclassified (36.697 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (59.633 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.50% β-sheet: 13.28% Coil/Unstructured: 49.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13392	HNH_3	3.67
PF07275	ArdA	2.75
PF13385	Laminin_G_3	1.83
PF02675	AdoMet_dc	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG4734	Antirestriction protein ArdA	Defense mechanisms [V]	2.75
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.80 %
All Organisms	root	All Organisms	42.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.80 %
Viruses	superkingdom	All Organisms → Viruses	36.70 %
cellular organisms	root	All Organisms → cellular organisms	5.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.19 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	4.59 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.75 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.19 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	4.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.75 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.83 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.19 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	4.59 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.75 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	1.83 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.19 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4.59 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.75 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.83 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.19 %
Desulfurellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales	2.75 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.83 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	0.92 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.92 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.19 %
unclassified Desulfurellales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales	2.75 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.83 %
unclassified Kyanoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae	0.92 %
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	0.92 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.19 %
Desulfurellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	2.75 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.83 %
Synechococcus phage S-SRM01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	0.92 %
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	0.92 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003277\|JGI25908J49247_10027663	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1629	Open in IMG/M
3300003394\|JGI25907J50239_1008992	All Organisms → Viruses → Predicted Viral	2367	Open in IMG/M
3300004126\|Ga0066179_10255906	Not Available	501	Open in IMG/M
3300006802\|Ga0070749_10306748	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	889	Open in IMG/M
3300007214\|Ga0103959_1221720	All Organisms → Viruses → Predicted Viral	2680	Open in IMG/M
3300007539\|Ga0099849_1006172	Not Available	5468	Open in IMG/M
3300007539\|Ga0099849_1180098	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	804	Open in IMG/M
3300007539\|Ga0099849_1285159	Not Available	599	Open in IMG/M
3300009039\|Ga0105152_10210414	Not Available	801	Open in IMG/M
3300009059\|Ga0102830_1047764	All Organisms → Viruses → Predicted Viral	1301	Open in IMG/M
3300009085\|Ga0105103_10289301	Not Available	891	Open in IMG/M
3300009149\|Ga0114918_10477217	Not Available	670	Open in IMG/M
3300009451\|Ga0127402_1006962	All Organisms → Viruses → Predicted Viral	3252	Open in IMG/M
3300009504\|Ga0114946_10021924	All Organisms → Viruses → Predicted Viral	3816	Open in IMG/M
3300009504\|Ga0114946_10064734	All Organisms → Viruses → Predicted Viral	2073	Open in IMG/M
3300009504\|Ga0114946_10160141	All Organisms → Viruses → Predicted Viral	1230	Open in IMG/M
3300009504\|Ga0114946_10256705	Not Available	931	Open in IMG/M
3300009504\|Ga0114946_10457650	Not Available	656	Open in IMG/M
3300009504\|Ga0114946_10569957	Not Available	574	Open in IMG/M
3300009504\|Ga0114946_10638368	Not Available	537	Open in IMG/M
3300009504\|Ga0114946_10657741	Not Available	527	Open in IMG/M
3300009504\|Ga0114946_10666275	Not Available	523	Open in IMG/M
3300009594\|Ga0114941_113925	Not Available	516	Open in IMG/M
3300009626\|Ga0114943_1000905	All Organisms → Viruses → Predicted Viral	1634	Open in IMG/M
3300009691\|Ga0114944_1065625	All Organisms → Viruses → Predicted Viral	1348	Open in IMG/M
3300009691\|Ga0114944_1124672	Not Available	997	Open in IMG/M
3300010293\|Ga0116204_1030710	All Organisms → Viruses → Predicted Viral	2111	Open in IMG/M
3300010296\|Ga0129348_1022138	All Organisms → Viruses → Predicted Viral	2320	Open in IMG/M
3300010296\|Ga0129348_1095147	All Organisms → Viruses → Predicted Viral	1052	Open in IMG/M
3300010297\|Ga0129345_1161094	Not Available	807	Open in IMG/M
3300010297\|Ga0129345_1295838	Not Available	561	Open in IMG/M
3300010300\|Ga0129351_1083595	Not Available	1289	Open in IMG/M
3300010300\|Ga0129351_1207017	Not Available	760	Open in IMG/M
3300010318\|Ga0136656_1149203	Not Available	801	Open in IMG/M
3300010354\|Ga0129333_10334348	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1350	Open in IMG/M
3300010354\|Ga0129333_10351067	All Organisms → Viruses → Predicted Viral	1312	Open in IMG/M
3300010354\|Ga0129333_10439847	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1150	Open in IMG/M
3300010354\|Ga0129333_10722618	Not Available	855	Open in IMG/M
3300010354\|Ga0129333_11749689	Not Available	505	Open in IMG/M
3300010389\|Ga0136549_10000402	Not Available	31515	Open in IMG/M
3300013087\|Ga0163212_1104503	Not Available	909	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10012370	Not Available	6723	Open in IMG/M
3300017774\|Ga0181358_1130278	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	876	Open in IMG/M
3300017778\|Ga0181349_1281204	Not Available	545	Open in IMG/M
3300017963\|Ga0180437_10071907	All Organisms → Viruses	3066	Open in IMG/M
3300018775\|Ga0188848_1005226	All Organisms → Viruses → Predicted Viral	1463	Open in IMG/M
3300019784\|Ga0181359_1115026	Not Available	969	Open in IMG/M
3300020074\|Ga0194113_10766265	Not Available	663	Open in IMG/M
3300020074\|Ga0194113_10901319	Not Available	597	Open in IMG/M
3300020083\|Ga0194111_10551940	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	730	Open in IMG/M
3300020084\|Ga0194110_10137930	All Organisms → Viruses → Predicted Viral	1939	Open in IMG/M
3300020109\|Ga0194112_10153117	All Organisms → Viruses → Predicted Viral	1946	Open in IMG/M
3300020109\|Ga0194112_11073699	Not Available	504	Open in IMG/M
3300020179\|Ga0194134_10180306	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	926	Open in IMG/M
3300020183\|Ga0194115_10157300	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	1174	Open in IMG/M
3300020183\|Ga0194115_10191585	All Organisms → Viruses → Predicted Viral	1018	Open in IMG/M
3300020183\|Ga0194115_10262179	Not Available	810	Open in IMG/M
3300020183\|Ga0194115_10266592	Not Available	800	Open in IMG/M
3300020183\|Ga0194115_10303997	Not Available	726	Open in IMG/M
3300020183\|Ga0194115_10316211	Not Available	705	Open in IMG/M
3300020183\|Ga0194115_10465289	Not Available	525	Open in IMG/M
3300020200\|Ga0194121_10207239	All Organisms → Viruses → Predicted Viral	1057	Open in IMG/M
3300020200\|Ga0194121_10403806	Not Available	676	Open in IMG/M
3300020220\|Ga0194119_10340621	Not Available	990	Open in IMG/M
3300020222\|Ga0194125_10857461	Not Available	513	Open in IMG/M
3300020578\|Ga0194129_10363305	Not Available	777	Open in IMG/M
3300020603\|Ga0194126_10281377	All Organisms → Viruses → Predicted Viral	1123	Open in IMG/M
3300021092\|Ga0194122_10089526	Not Available	1730	Open in IMG/M
3300021092\|Ga0194122_10128860	All Organisms → Viruses → Predicted Viral	1375	Open in IMG/M
3300021092\|Ga0194122_10532540	Not Available	583	Open in IMG/M
3300021093\|Ga0194123_10455223	Not Available	575	Open in IMG/M
3300021373\|Ga0213865_10100158	All Organisms → Viruses → Predicted Viral	1546	Open in IMG/M
3300021376\|Ga0194130_10678596	Not Available	501	Open in IMG/M
3300021425\|Ga0213866_10034491	All Organisms → Viruses → Predicted Viral	2932	Open in IMG/M
3300021425\|Ga0213866_10261942	Not Available	877	Open in IMG/M
3300021425\|Ga0213866_10338284	Not Available	746	Open in IMG/M
3300021963\|Ga0222712_10000169	Not Available	93550	Open in IMG/M
3300021964\|Ga0222719_10255574	All Organisms → Viruses → Predicted Viral	1162	Open in IMG/M
3300021964\|Ga0222719_10560263	Not Available	673	Open in IMG/M
3300022563\|Ga0212128_10329440	Not Available	954	Open in IMG/M
3300022563\|Ga0212128_10626459	Not Available	649	Open in IMG/M
3300024262\|Ga0210003_1017841	Not Available	4440	Open in IMG/M
3300025135\|Ga0209498_1000380	Not Available	27197	Open in IMG/M
3300025135\|Ga0209498_1006013	Not Available	7012	Open in IMG/M
3300025135\|Ga0209498_1075293	All Organisms → Viruses → Predicted Viral	1437	Open in IMG/M
3300025135\|Ga0209498_1080941	All Organisms → Viruses → Predicted Viral	1367	Open in IMG/M
3300025135\|Ga0209498_1164142	Not Available	832	Open in IMG/M
3300025135\|Ga0209498_1202020	Not Available	720	Open in IMG/M
3300025149\|Ga0209827_11286364	All Organisms → Viruses → Predicted Viral	1621	Open in IMG/M
3300025283\|Ga0208048_1011397	All Organisms → Viruses → Predicted Viral	3109	Open in IMG/M
3300025674\|Ga0208162_1019129	All Organisms → Viruses → Predicted Viral	2673	Open in IMG/M
3300025674\|Ga0208162_1038796	All Organisms → Viruses → Predicted Viral	1678	Open in IMG/M
3300027278\|Ga0208439_1086903	Not Available	568	Open in IMG/M
3300027656\|Ga0209357_1097159	Not Available	839	Open in IMG/M
3300027679\|Ga0209769_1218607	Not Available	587	Open in IMG/M
(restricted) 3300027728\|Ga0247836_1133022	Not Available	1113	Open in IMG/M
(restricted) 3300027730\|Ga0247833_1022369	All Organisms → Viruses → Predicted Viral	4544	Open in IMG/M
3300027892\|Ga0209550_10045280	All Organisms → Viruses → Predicted Viral	3607	Open in IMG/M
3300027917\|Ga0209536_100496107	All Organisms → Viruses → Predicted Viral	1524	Open in IMG/M
(restricted) 3300027970\|Ga0247837_1173169	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	928	Open in IMG/M
3300029199\|Ga0168647_100926	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	11119	Open in IMG/M
3300031519\|Ga0307488_10832275	Not Available	508	Open in IMG/M
3300031539\|Ga0307380_10881164	Not Available	729	Open in IMG/M
3300031758\|Ga0315907_11265980	Not Available	512	Open in IMG/M
3300031999\|Ga0315274_10133308	All Organisms → Viruses → Predicted Viral	3178	Open in IMG/M
3300032053\|Ga0315284_11436256	Not Available	737	Open in IMG/M
3300032053\|Ga0315284_12086448	Not Available	570	Open in IMG/M
3300033233\|Ga0334722_10198710	Not Available	1486	Open in IMG/M
3300033978\|Ga0334977_0102881	All Organisms → Viruses → Predicted Viral	1525	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.17%
Terrestrial	Environmental → Terrestrial	1.83%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	61.47%
Marine	Environmental → Aquatic → Marine	28.44%
Thermal Springs	Environmental → Aquatic → Thermal Springs	5.50%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.92%
Sediment	Environmental → Aquatic → Sediment	0.92%
Unclassified	Environmental → Aquatic → Unclassified	0.92%
Soil	Environmental → Terrestrial → Soil	0.92%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.92%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	35.78%
Coastal	Environmental → Aquatic → Marine → Coastal	21.10%
Sediment	Environmental → Aquatic → Freshwater → Sediment	14.68%
Lentic	Environmental → Aquatic → Freshwater → Lentic	9.17%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	5.50%
Oceanic	Environmental → Aquatic → Marine → Oceanic	2.75%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.75%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.92%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.92%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.92%
Clay	Environmental → Terrestrial → Soil → Clay	0.92%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	30.28%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	21.10%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	14.68%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	9.17%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.50%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	5.50%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	2.75%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.75%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.92%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	0.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	23.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	13.76%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	11.01%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	9.17%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.50%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	5.50%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	5.50%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.59%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	3.67%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.75%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	1.83%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.92%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	0.92%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	0.92%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.92%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.92%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.92%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.92%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	0.92%
Marine Methane Seep Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment	0.92%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.92%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.92%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300004126	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (version 2)	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300007214	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface layer) 9 sequencing projects	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300009039	Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009451	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 8m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009504	Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment	Environmental	Open in IMG/M
3300009594	Groundwater microbial communities from Devils Hole, Nevada to study Microbial Dark Matter (Phase II) - Devils Hole	Environmental	Open in IMG/M
3300009626	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP1	Environmental	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300010293	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 52m metaG	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010389	Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsf	Environmental	Open in IMG/M
3300013087	Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30L	Environmental	Open in IMG/M
3300013130 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017963	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaG	Environmental	Open in IMG/M
3300018775	Metatranscriptome of marine microbial communities from Baltic Sea - GS679_0p8	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020083	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300m	Environmental	Open in IMG/M
3300020084	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m	Environmental	Open in IMG/M
3300020109	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400m	Environmental	Open in IMG/M
3300020179	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0m	Environmental	Open in IMG/M
3300020183	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surface	Environmental	Open in IMG/M
3300020200	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50m	Environmental	Open in IMG/M
3300020220	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100m	Environmental	Open in IMG/M
3300020222	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015034 Kigoma Deep Cast 250m	Environmental	Open in IMG/M
3300020578	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015038 Kigoma Deep Cast 35m	Environmental	Open in IMG/M
3300020603	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150m	Environmental	Open in IMG/M
3300021092	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015021 Mahale Deep Cast 10m	Environmental	Open in IMG/M
3300021093	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015023 Mahale A surface	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300021376	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015050 Kigoma 12 surface	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300024262	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)	Environmental	Open in IMG/M
3300025135	Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment (SPAdes)	Environmental	Open in IMG/M
3300025149	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2 (SPAdes)	Environmental	Open in IMG/M
3300025283	Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30L (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300027278	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703 (SPAdes)	Environmental	Open in IMG/M
3300027656	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027728 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14m	Environmental	Open in IMG/M
3300027730 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_8m	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300027970 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14.5m	Environmental	Open in IMG/M
3300029199	Deep subsurface microbial communities from shale gas basins in Pennsylvania, USA - 1_Day0	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25908J49247_100276632	3300003277	Freshwater Lake	MFSTTLTDPKKFGNTYQWAILSVLPMDSNKNQHGLNSPEIKDALGLSNDARTSLCLMLKTMASKGLVMRYDYKIGNRRIVSYKRLLPLRKREILSRWVQR*
JGI25907J50239_10089923	3300003394	Freshwater Lake	MPPFLCYNLRVPNTKGIQPMFSTTLTDPKKFGNTYQWAILSVLPMDSNKNQHGLNSPEIKDALGLSNDARTSLCLMLKTMASKGLVMRYDYKIGNRRIVSYKRLLPLRKREILSRWVQR*
Ga0066179_102559061	3300004126	Freshwater Lake	TTLTDPKKFGNTYQWAILSVLPMDSNKNQHGLNSPEIKDALGLSNDARTSLCLMLKTMASKGLVMRYDYKIGNRRIVSYKRLLPLRKREILSRWVQR*
Ga0070749_103067481	3300006802	Aqueous	MFSITLTNPKSFGNTYQWAILSILPMDSDMNRAGLNSPDIKEALGLSNSARTSLCLMMKEMAGKGLVRRYDLKIGNRRIVTYKRLLPLRKREIIARALRGVTL*
Ga0103959_12217202	3300007214	Freshwater Lake	MFSATLTNPQSFGATYQWAILSVLPMDSDKKRHGLNSPEIKKALGLSNAARTSLCLMLKEMAQKGLVQRYDLKIGNRRIVSYKRLIPLRKRERIARFIGI*
Ga0099849_10061723	3300007539	Aqueous	MFSATLTDSKTFGSTFQWAILSVLPMDDDRSQHGLNSPEINAALGIPNDARTSLCLLLKSMAQRGLVRRYDITLGKRRIVSYKRLLPLRKRERIGRWIKGTV*
Ga0099849_11800982	3300007539	Aqueous	MFSTTITDSRSFGATYRWAILSVLPMDSNKKVGGLNSPEIKSALGLSNAARTSLCLMMKEMAQNGLVQRYDYKVGNRRFVTYKRLLPLRKRERIAQFLGL*
Ga0099849_12851591	3300007539	Aqueous	MFSTTITNPQTFGNTYQWAILSVLPMDSDKKVGGLNSPEIKSALGLSNAARTSLCLMLKEMAGKGLVQRYDYKVGNRRFVTYKRLLPLRKRERITRFLSL*
Ga0105152_102104142	3300009039	Lake Sediment	MVQGVDILGDLPHNKISLPHPTMFSVTLTNPKSFGNTYQQAILSVLPMDSDKNRCGLNSPEIKNALGLSNDARTSLCLMMKTMAAKGLVRRYDLKFGNRRIVSYKRLLPLRKREILSRWIQG*
Ga0102830_10477643	3300009059	Estuarine	MFSTTLTDPRSFGATYQWAILSILPMNSDKNRHGLNSPEIKKALGLSNAARTSLCLMLKEMAQKGLVERYEYTFRNRKIVTYKRLLPLRKREILARMIKG*
Ga0105103_102893012	3300009085	Freshwater Sediment	MFSTTITNPQTFGNTYQWAILSVLPMDSNKKVHGLNSPEIKEALGLSNAARTSLCLMMKEMAGKGLVRRYDLKIGNRRIVSYKRILPLRKRERIAQFLGL*
Ga0114918_104772171	3300009149	Deep Subsurface	MFSTTITNPQSFGATYQLAILSVLPMDSNKKVHGLNSPEIKNALGLSNAARTSLCLMMKEMAAKGLVRRYDLKIGNRRIVSYKRLMPLRKRERIARFLGL*
Ga0127402_10069622	3300009451	Meromictic Pond	MFSTTITDSRSFGATYQWAILSVLPMDSNKKVGGLNSPEIKEALGLSNAARTSLCLMMKEMAQNGLVQRYEYKIKGRRFVTYKRLLPLRKRERIAQFLGL*
Ga0114946_100219248	3300009504	Sediment	MFSTTLTDSRSFGATYQWAILSVLPMDSDKKRHGLNSPEIKKELGLSNAARTSLCLMMKEMAAEGLVQRYDYKVGNRRFVTYKRILPLRKRERIARFLGL*
Ga0114946_100647344	3300009504	Sediment	MFSTTLTNPKTFGNTYQLAILSVLPMDSDKKRHGLNSPEIKSALGLSNAARTSLCLMLKEMAGKGLVQRYDLKIGNRRIVSYKRILPLRKRERIARLIRGV*
Ga0114946_101601413	3300009504	Sediment	MFSTTLTNPKTFGNTYQLAILSILPMDSDKKHHGLNSPEIKDALGLSNAARTSLCLMLKEMAQNGLVQRYDYKVGKRRFVTYKRILPLRKREQIARLIRGV*
Ga0114946_102567052	3300009504	Sediment	MFSTTLTNPKTFGNTYQLAILSVLPMDSNKKVHGLNSPEIKEALGLSNAARTSLCLMMKEMADKGLVRRYDLKIGNRRIVSYKRLLPLRKREQIARLIRGV*
Ga0114946_104576502	3300009504	Sediment	MFSTTLTNPKTFGNTYQWAILSILPMDSDKKRHGLNSPEIKEALGLSNAARTSLCLMLKEMAGKGLVRRYDLKIGNRRIVSYKRILPLRKREQIARLIRGV*
Ga0114946_105699572	3300009504	Sediment	MFSTTLTNSRSFGAAYQWAILSVLPMDSNKKRHGLNSPEIKSALGLSNAARTSLCLMMKEMSAEGLVQRYDYKVGKRRFVTYKRILPLRKRERIARLIRGV*
Ga0114946_106383681	3300009504	Sediment	MFSTTLTNPKTFGNTYQWAILSILPMDSDKNQHGLNSPEIKSALGLSNAARTSLCLMLKEMADKGLVRRYDYKVGKRRFVTYKRLLPLRKREQIARLNRGV*
Ga0114946_106577411	3300009504	Sediment	SVQTTEPIMFSTTLTNPKTFGNTYQWAILSILPMDSDKKVHGLNSPEIKSALGLSNAARTSLCLILKEMAGKGLLRRYDLKIGKRRIVSYKRLLPLRKREQIARLIRGV*
Ga0114946_106662751	3300009504	Sediment	MFSATLTDSRSFGATYQWAILSVLPMDSNKKVHGLNSPEIKKELGLSNAARTSLCLMMKEMAAEGLVQRYDYKVGNRRFVTYKRILPLRKRERIA
Ga0114941_1139252	3300009594	Groundwater	MFSTTLTNPKTFGNTYQWAILSILPMDSDKNRHGLNSPEIKSALGLSNAARTSLCLMLKEMAGKGLVQRYDLKIGNRRIVSYKRLLPLRKREQIARLIRGV*
Ga0114943_10009053	3300009626	Thermal Springs	MFSTTLTNPKTFGNTYQWAILSVLPMDSDKNRHGLNSPEIKSALGLSNAARTSLCLMLKEMAGKGLVQRYDLKIGNRRIVSYKRLLPLRKREQIARLIRGV*
Ga0114944_10656251	3300009691	Thermal Springs	KFTTRTTMFSTTLTNPKTFGNTYQWAILSVLPMDSDKNRHGLNSPEIKSALGLSNAARTSLCLMLKEMAGKGLVQRYDLKIGNRRIVSYKRLLPLRKREQIARLIRGV*
Ga0114944_11246721	3300009691	Thermal Springs	MFSTTLTNPKTFGNTYQWAILSILPMDSDKNQHGLNSPEIKSALGLSNAARTSLCLMLKEMAGKGLVQRYDLKIGNRRIVSYKRLLPLRKREQIARLIRGV*
Ga0116204_10307103	3300010293	Anoxic Lake Water	MFSVTLTNPQSFGATYQRAILAVLPMDSDKNRHGLNSPEIKSALGLSNAARTSLCLMMKEMAHKGLVQRYEYKIGNRRIVSYKRLLPLRKREILSRWIQG*
Ga0129348_10221381	3300010296	Freshwater To Marine Saline Gradient	TFGSTFQWAILSVLPMDDDRSQHGLNSPEINAALGIPNDARTSLCLLLKSMAQRGLVRRYDITLGKRRIVSYKRLLPLRKRERIGRWIKGTV*
Ga0129348_10951471	3300010296	Freshwater To Marine Saline Gradient	MFSTTITDSRSFGATYRWAILSVLPMDSDKNQHGLNSPEIKEALGLSNAARTSLCLMMKEMAGKGLVQRYDYKVGNRRFVTYKRLLPLRKRERIARFLSL*
Ga0129345_11610942	3300010297	Freshwater To Marine Saline Gradient	MFSTTITNPQTFGNTYQWAILSVLPMDSNKKVGGLNSPEIKEALGLSNAARTSLCLMMKEMAGKGLVQRYDYKVGNRRFVTYKRLLPLRKRERIAQFLGL*
Ga0129345_12958381	3300010297	Freshwater To Marine Saline Gradient	MFSTTITNPQSFGNTYQWAILSVLPMDSDKNQHGLNSPEIKSALGLSNAARTSLCLMMKEMAGKGLVQRYDYKVGNRRFVTYKRLLPLRKRERITRFLGL*
Ga0129351_10835951	3300010300	Freshwater To Marine Saline Gradient	MLSATLTDSKTFGSTFQWAILSVLPMDDDRSQHGLNSPEINAALGIPNDARTSLCLLLKSMAQRGLVRRYDITLGKRRIVSYKRLLPLRKRERIGRWIKGTV*
Ga0129351_12070172	3300010300	Freshwater To Marine Saline Gradient	MFSTTITDSRSFGATYQWAILSVLPMDSNKKVGGLNSPEIKSALGLSNAARTSLCLMLKEMAGKGLVQRYDYKVGNRRFVTYKRLLPLRKRERIAQFLGL*
Ga0136656_11492032	3300010318	Freshwater To Marine Saline Gradient	MFSTTITDSRSFGATYQWAILSVLPMDSNKKVGGLNSPEIKSALGLSNAARTSRCRMLKEMAGKGLVQRYDYKVGKRRFVTYKRLMPLRKRERITRFLGL*
Ga0129333_103343484	3300010354	Freshwater To Marine Saline Gradient	MFSITLTNPKSFGNTYQWAILSILPMDSDMNRAGLNSPDIKEALGLSNSARTSLCLMMKEMAGKGLVRRYDYKIGNRRIVTYKRLLPLRKREIIARALRGVTL*
Ga0129333_103510672	3300010354	Freshwater To Marine Saline Gradient	MFSTTLTNPQSFGATYQWAILSILPMDSDKNRHGLNSPEIKNALGLSNAARTSLCLMMKEMAQKGLVRRYEIKIGNRRIVSYKRLLPLRKREVFSRWLKG*
Ga0129333_104398473	3300010354	Freshwater To Marine Saline Gradient	MFSITLTNPKSFGNTYQWAILSILPMDSDKNRAGLNSPDIKEALGLSNSARTSLCLMMKEMAGKGLVRRYDLKIGNRRIVTYKRLLPLRKREIIARALRGVTL*
Ga0129333_107226182	3300010354	Freshwater To Marine Saline Gradient	VFSVTLTNPRSFGATYQWAILSILPMDDDKTQHGLNSPEIKNALGLSNAARTSLCLMMKEMASKGLVRRYDLKIGNRRIVSYKRLLPLRKREILGRWVRGTV*
Ga0129333_117496891	3300010354	Freshwater To Marine Saline Gradient	MFSTTLTDPRSFGATYQWAILSILPMNSDKNRHGLNSPEIKRALGLSNSARTSLCLMLKEMAQKGLVERYEYTFRNRKIVTYKRLLPLRKREILARMIKG*
Ga0136549_1000040216	3300010389	Marine Methane Seep Sediment	MFSTTITNPQTFGNTYQWAILSVLPMDSDKNQHGLNSPEIKSALGLSNAARTSLCLMMKEMAGKGLVQRYDYKVGNRRFVTYKRILPLRKRERIARFLGL*
Ga0163212_11045031	3300013087	Freshwater	MNKRDRNPHNHHPTMFSVTLTDPKSFGATYQWAILAVLPMDSDKTRHGLNSPEIKNALGLSNDARTSLCLMMRTMAEKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG*
(restricted) Ga0172363_100123701	3300013130	Sediment	MFSVTLTNPQSFGATYQRAILAVLPMDSDKNRHGLNSPEIKSALGLSNAARTSLCLMMKEMAHKGLVQRYEYKIGNRRIVSYKRLLPLRKREILSRWI
Ga0181358_11302781	3300017774	Freshwater Lake	MFSTTLTDPKKFGNTYQWAILSVLPMDSNKNQHGLNSPEIKDALGLSNDARTSLCLMLKTMASKGLVMRYDYKIGNRRIVSYKR
Ga0181349_12812041	3300017778	Freshwater Lake	QPMFSTTLTDPKKFGNTYQWAILSVLPMDSNKNQHGLNSPEIKDALGLSNDARTSLCLMLKTMASKGLVMRYDYKIGNRRIVSYKRLLPLRKREILSRWVQR
Ga0180437_100719076	3300017963	Hypersaline Lake Sediment	MFSTTITNPQTFGNTYQWAILSVLPMDSNRKKKGLNSPEIKEALGLSNAARTSLCLMMKEMAQNGLVQRYEYKIKGRRFVTYKRLLPLRKRERIAQFLGL
Ga0188848_10052261	3300018775	Freshwater Lake	MFSITLTDPKSFGATYQQAILSVLPMDDDNQLGLNSPEIKNALGLSNDARTSLCLMMKTMAAKGLVRRYDYKFGNRRIVSYKRLLPLRKREILSRLILGS
Ga0181359_11150262	3300019784	Freshwater Lake	MFSTTLTDPKKFGNTYQWAILSVLPMDSNKNQHGLNSPEIKDALGLSNDARTSLCLMLKTMASKGLVMRYDYKIGNRRIVSYKRLLPLRKREILSRWVQR
Ga0194113_107662652	3300020074	Freshwater Lake	MFSVTLTDPKTFGATYQWAILSVLPMDSDKNRHGLNSPEIKSALGLSNAARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Ga0194113_109013191	3300020074	Freshwater Lake	MFSVTLTDPKTFGATYQWAILSVLPMDSDKNRHGLNSPEIKQALGLSNAARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Ga0194111_105519401	3300020083	Freshwater Lake	MFSVTLTNPQSFGATYQRAILSVLPMDSDKNRHGLNSPEIKSALGLSNAARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRKREI
Ga0194110_101379303	3300020084	Freshwater Lake	HGGIGNGLPISYTMSKRDRNPHNPPRIMFSVTLTDPKTFGATYQWAILSVLPMDSDKNRHGLNSPEIKSALGLSNAARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Ga0194112_101531172	3300020109	Freshwater Lake	MFSVTLTDPKTFGATYQWAILSVLPMDSDKNRHGLNSPEIKSALGLSNAARTSLCLMMKEMAQKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Ga0194112_110736991	3300020109	Freshwater Lake	HSPRIMFSVTLTNPQSFGATYQRAILSVLPMDSDKNRHGLNSPEIKSALGLSNDARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Ga0194134_101803061	3300020179	Freshwater Lake	MFSVTLTNPQSFGATYQRAILSVLPMDSDKNRHGLNSPEIKSALGLSNAARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Ga0194115_101573002	3300020183	Freshwater Lake	MFSVTLTNPQSFGAIYQRAILAVLPMDSDKNRHGLNSPEIKQALGLSNAARTSLCLMMKEMAAKGLVRRYDYKLGGRRIVSYKRLLPLRKREIVSRWIQG
Ga0194115_101915852	3300020183	Freshwater Lake	MSKRDRNPHHPPRIMFSVTLTNPQSFGATYQRAILSVLPMDSDKNRHGLNSPEIKSALGLSNDARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Ga0194115_102621791	3300020183	Freshwater Lake	VLYTMNKRDRNPHHPPRIMFSVTLTNPQSFGATYQRAILSVLPMDSDKNRHGLNSPEIKSALGLSNDARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Ga0194115_102665922	3300020183	Freshwater Lake	MFSVTLTDPKSFGATYQWAILSVLPMDSDKNRHGLNSPEIKQALGLSNAARTSLCLMMKEMAQKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Ga0194115_103039971	3300020183	Freshwater Lake	MSKRDRNPHHPPRIMFSVTLTNPQSFGATYQRAILSVLPMDSDKNRHGLNSPEIKSALGLSNDARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSR
Ga0194115_103162112	3300020183	Freshwater Lake	MFSVTLTNPQSFGAIYQRAILAVLPMDSDKNRHGLNSPEIKQALGLSNAARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Ga0194115_104652891	3300020183	Freshwater Lake	NPHHPPRIMFSVTLTNPQSFGATYQRAILSVLPMDSDKNRHGLNSPEIKSALGLSNAARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Ga0194121_102072391	3300020200	Freshwater Lake	MFSVTLTNPQSFGATYQRAILSVLPMDSDKNRHGLNSPEIKSALGLSNDARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRK
Ga0194121_104038061	3300020200	Freshwater Lake	MFSVTLTDPKSFGATYQWAILSVLPMDSDKNRHGLNSPEIKSALGLSNAARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Ga0194119_103406211	3300020220	Freshwater Lake	MFSVTLTNPQSFGATYQRAILSVLPMDSDKNRHGLNSPEIKSALGLSNDARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Ga0194125_108574611	3300020222	Freshwater Lake	MFSVTLTNPQSFGAIYQRAILAVLPMDSDKNRHGLNSPEIKQALGLSNDARTSLCLMMKTMTAEGLVRRYDYKLGGRRIVSYKRLLPLRKREILSRWIQG
Ga0194129_103633052	3300020578	Freshwater Lake	MFSVTLTDPKTFGATYQWAILSVLPMDSDKNRHGLNSPEIKQALGLSNAARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRKREILSRWIQG
Ga0194126_102813771	3300020603	Freshwater Lake	MFSVTLNSPQSFGAIYQRAILAVLPMDSDKNRHGLNSPEIKQALGLSNDARTSLCLMMKTMTAEGLVRRYDYKLGGRRIVSYKRL
Ga0194122_100895263	3300021092	Freshwater Lake	YQWAILSVLPMDSDKNRHGLNSPEIKSALGLSNAARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Ga0194122_101288602	3300021092	Freshwater Lake	MFSVTLTNPQSFGATYQRAILSVLPMDSDKNRHGLNSPEIKQALGLSNAARTSLCLMMKEMAAKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Ga0194122_105325401	3300021092	Freshwater Lake	VSHGGIGNGLPISYTMSKRDRNPHHPPRIMFSVTLTDPKSFGATYQWAILSVLPMDSDKNRHGLNSPEIKQALGLSNAARTSLCLMMKEMAQKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Ga0194123_104552231	3300021093	Freshwater Lake	GNGLPISYTMSKRDRNPHHPPRIMFSVTLTDPKTFGATYQWAILSVLPMDSDKNRHGLNSPEIKQALGLSNAARTSLCLMMKEMAQKGLVRRYDYKLGNRRIVSYKRLLPLRKREILSRWIQG
Ga0213865_101001582	3300021373	Seawater	MFSTTITNPQTFGNTYQWAILSVLPMDSDKNQHGLNSPEIKSALGLSNAARTSLCLMMKEMAGKGLVQRYDYKVGKRRFVTYKRLLPLRKRERIAQFLGL
Ga0194130_106785962	3300021376	Freshwater Lake	MFSVTLTNPQSFGAIYQRAILAVLPMDSDKNRHGLNSPEIKQALGLSNAARTSLCLQLKEMAQKGLVQRYDYKLGGRRIVSYKRLL
Ga0213866_100344913	3300021425	Seawater	MFSTTITNPQSFGNTYQWAILSVLPMDSDKNQHGLNSPEIKEALGLSNAARTSLCLMMKEMAQNGLVQRYEYKIKGRRFVTYKRLLPLRKRERIAQFLGL
Ga0213866_102619421	3300021425	Seawater	PAAESVRLYVGSQSLDQMFSTTITNPQTFGNTYQWAILSVLPMDSDKNQHGLNSPEIKSALGLSNAARTSLCLMMKEMAGKGLVQRYDYKVGNRRFVTYKRLLPLRKRERIARFLGL
Ga0213866_103382841	3300021425	Seawater	VGSQSLDQMFSTTITNPQTFGNTYQWAILSVLPMDSNKKVGGLNSPEIKEALGLSNAARTSLCLMMKEMAGKGLVQRYDYKVGNRRFVTYKRILPLRKRERIAQFLGL
Ga0222712_1000016962	3300021963	Estuarine Water	MFSTTITNPKSFGATYQWAILSVLPMDSNKKVHGLNSPEIKSALGLSNAARTSLCLMLKEMAGKGLVRRYDLKIGNRRIVSYKRLMPLRKRERIARFLGL
Ga0222719_102555742	3300021964	Estuarine Water	MFSTTITNPQSFGNTYQWAILSVLPMDSDKNQHGLNSPEIKEALGLSNAARTSLCLMMKEMAGKGLVQRYDYKVGNRRFVTYKRILPLRKRERIARFLGL
Ga0222719_105602631	3300021964	Estuarine Water	VGSQSLDQMFSTTITDSRSFGATYRWAILSVLPMDSDKKVGGLNSPEIKSALGLSNAARTSLCLMMKEMAQNGLVQRYDYKVGNRRFVTYKRLLPLRKRERITRFLGL
Ga0212128_103294403	3300022563	Thermal Springs	MFSTTLTNPKTFGNTYQWAILSILPMDSDKNRHGLNSPEIKSALGLSNAARTSLCLMLKEMAGKGLVQRYDLKIGNRRIVSYKRLLPLRKREQIARLIR
Ga0212128_106264592	3300022563	Thermal Springs	MFSTTLTNPKTFGNTYQWAILSVLPMDSDKNRHGLNSPEIKSALGLSNAARTSLCLMLKEMAGKGLVQRYDLKIGNRRIVSYKRLLPLRKREQIARLIRGV
Ga0210003_10178417	3300024262	Deep Subsurface	MFSTTITNPQSFGATYQLAILSVLPMDSNKKVHGLNSPEIKNALGLSNAARTSLCLMMKEMAAKGLVQRYDYKVGNRRFVTYKRLLPLRKRERIAQFLGL
Ga0209498_100038017	3300025135	Sediment	MFSTTLTDSRSFGATYQWAILSVLPMDSDKKRHGLNSPEIKKELGLSNAARTSLCLMMKEMAAEGLVQRYDYKVGNRRFVTYKRILPLRKRERIARFLGL
Ga0209498_100601310	3300025135	Sediment	MFSTTLTNPKTFGNTYQLAILSVLPMDSDKKRHGLNSPEIKSALGLSNAARTSLCLMLKEMAGKGLVQRYDLKIGNRRIVSYKRILPLRKRERIARLIRGV
Ga0209498_10752932	3300025135	Sediment	MFSTTLTNSRSFGAAYQWAILSVLPMDSNKKRHGLNSPEIKSALGLSNAARTSLCLMMKEMSAEGLVQRYDYKVGKRRFVTYKRILPLRKRERIARLIRGV
Ga0209498_10809412	3300025135	Sediment	MFSTTLTNPKTFGNTYQLAILSILPMDSDKKHHGLNSPEIKDALGLSNAARTSLCLMLKEMAQNGLVQRYDYKVGKRRFVTYKRILPLRKREQIARLIRGV
Ga0209498_11641422	3300025135	Sediment	MFSTTLTNPKTFGNTYQLAILSVLPMDSNKKVHGLNSPEIKEALGLSNAARTSLCLILKEMAGKGLLRRYDLKIGKRRIVSYKRLLPLRKREQIARLIRGV
Ga0209498_12020201	3300025135	Sediment	TMFSTTLTNPKTFGNTYQWAILSILPMDSDKKRHGLNSPEIKNALGLSNAARTSLCLMLKEMAGKGLVQRYDLKIGNRRIVSYKRLLPLRKREQIARLIRGV
Ga0209827_112863644	3300025149	Thermal Springs	MFSTTLTNPKTFGNTYQWAILSILPMDSDKNRHGLNSPEIKSALGLSNAARTSLCLMLKEMAGKGLVQRYDLKIGNRRIVSYKRLLPLRKREQIARLIRGV
Ga0208048_10113972	3300025283	Freshwater	MFSVTLTDPKSFGATYQWAILAVLPMDSDKTRHGLNSPEIKNALGLSNDARTSLCLMMRTMAEKGLVRRYDYKLGNRRIVSYKRLLPLRKREIVSRWIQG
Ga0208162_10191291	3300025674	Aqueous	STFQWAILSVLPMDDDRSQHGLNSPEINAALGIPNDARTSLCLLLKSMAQRGLVRRYDITLGKRRIVSYKRLLPLRKRERIGRWIKGTV
Ga0208162_10387961	3300025674	Aqueous	MFSTTITDSRSFGATYRWAILSVLPMDSNKKVGGLNSPEIKSALGLSNAARTSLCLMMKEMAQNGLVQRYDYKVGNRRFVTYKRLLPLRKRERIAQFLGL
Ga0208439_10869031	3300027278	Estuarine	STTLTDPRSFGATYQWAILSILPMNSDKNRHGLNSPEIKKALGLSNAARTSLCLMLKEMAQKGLVERYEYTFRNRKIVTYKRLLPLRKREILARMIKG
Ga0209357_10971593	3300027656	Freshwater Lake	TTLTDPKKFGNTYQWAILSVLPMDSNKNQHGLNSPEIKDALGLSNDARTSLCLMLKTMASKGLVMRYDYKIGNRRIVSYKRLLPLRKREILSRWVQR
Ga0209769_12186071	3300027679	Freshwater Lake	TKGTQPMFSTTLTDPKKFGNTYQWAILSVLPMDSNKNQHGLNSPEIKDALGLSNDARTSLCLMLKTMASKGLVMRYDYKIGNRRIVSYKRLLPLRKREILSRWVQR
(restricted) Ga0247836_11330221	3300027728	Freshwater	MFSVTLTDPKTFGNTYQKAILSILPMDSDKNKLGLNLPEIKDALGLSNDARTSLCLMLKTFVSKGLVRRYDYKIGNRRIVSYKRLLPLRRREILSRWIQR
(restricted) Ga0247833_10223693	3300027730	Freshwater	MFSATLTNPQSFGATYQWAILSVLPMDSDKKRHGLNSPEIKKALGLSNAARTSLCLMLKEMAQKGLVQRYDLKIGNRRIVSYKRLIPLRKRERIARFFGI
Ga0209550_1004528012	3300027892	Freshwater Lake	MPPFLCYNLRVPNTKGIQPMFSTTLTDPKKFGNTYQWAILSVLPMDSNKNQHGLNSPEIKDALGLSNDARTSLCLMLKTMASKGLVMRYDYKIGNRRIVSYKRLLPLRKREILSRWVQR
Ga0209536_1004961073	3300027917	Marine Sediment	MFSATLTDSKTFGSTFQWAILSVLPMDDDRSQHGLNSPEINAALGIPNDARTSLCLLLKSMAQRGLVRRYDITLGKRRIVSYKRLLPLRKRERIGRWIKGTV
(restricted) Ga0247837_11731694	3300027970	Freshwater	QWAILSVLPMDSDKKRHGLNSPEIKKALGLSNAARTSLCLMLKEMAQKGLVQRYDLKIGNRRIVSYKRLIPLRKRERIARFFGI
Ga0168647_10092615	3300029199	Deep Subsurface	MFSTTITNPQSFGNTYQWAILSVLPMDSNKKVGGLNSPEIKEALGLSNAARTSLCLMMKEMAGKGLVQRYDYKVGNRRFVTYKRLLPLRKRERIAQFLGL
Ga0307488_108322752	3300031519	Sackhole Brine	KTFGNTYQWAILSVLPMDSNKKVHGLNSPEIKNALGLSNAARTSLCLMMKEMAAKGLVQRYDLKIGNRRIVSYKRLMPLRKRERIARFLGL
Ga0307380_108811642	3300031539	Soil	MFSVTLTDPKSFGATYQQAILSVLPMDDDKQHGMNLPEIKTALGLSNDARTSLCLMMKTMAAKGLVRRYDYKIDNRRIVSYKRLMPLRKREIVSRWIQG
Ga0315907_112659801	3300031758	Freshwater	MFSITLTNPKSFGNTYQWAILSILPMDSDMNRAGLNSPDIKEALGLSNSARTSLCLMMKEMAGKGLVRRYDYKIGNRRIVTYKRLLPLRKREII
Ga0315274_101333082	3300031999	Sediment	MIRSSETNKFSHSPPETMFSVTLTDPKSFGATYQQAILSVLPMDDDKKRHGLNSPEIKSALGLSNDARTSLCLMMKTMAAKGLVRRYDLKIGKCRIVSYKRLLPLRKREILSRWIQG
Ga0315284_114362561	3300032053	Sediment	SPPETMFSVTLTDPKSFGATYQQAILSVLPMDDDKKRHGLNSPEIKSALGLSNDARTSLCLMMKTMAAKGLVRRYDLKIGKCRIVSYKRLLPLRKREILSRWIQG
Ga0315284_120864481	3300032053	Sediment	MFSITLTDPKSFGATYQQAILSVLPMDDDNQHGLNLPEIKTALGLSNDARTSLCLMMKTFVSKGLVRRYDYKTSKGRIVSYKRLLPLRKREILSRWIQG
Ga0334722_101987102	3300033233	Sediment	MFSITLTDPKSFGATYQQAILSVLPMDDDYKQHGLNLPEIKTALGLSNDARTSLCLMMKTFVSKGLVRRYDYKTSKGRIVSYKRLLPLRKREILSRWIQG
Ga0334977_0102881_894_1196	3300033978	Freshwater	MFSATLTDPTTFGNTYQWAILAVLPMDSDKKRHGLNSPEIKKALGLSNAARTSLCLMLKEMAQKGLVQRYDLKIGNRRIVSYKRLIPLRKRERIVRFLGI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters