Metagenome / Metatranscriptome Family F088400

Basic Information
Family ID	F088400
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	89 residues
Representative Sequence	MRTLSSLLGRKIVTESGSDLGRCHDVRAELGASRLRVTGLVLGRQGHLEHFGIGAQASASSARVRDSDLIEWKDIVRFEADRIVVRDSAED
Number of Associated Samples	87
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	1.83 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Most Common Taxonomy
Group	Unclassified (94.495 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.349 % of family members)
Environment Ontology (ENVO)	Unclassified (29.358 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.541 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.76% β-sheet: 32.77% Coil/Unstructured: 55.46%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF01566	Nramp	18.35
PF07885	Ion_trans_2	8.26
PF06724	DUF1206	7.34
PF01061	ABC2_membrane	4.59
PF01593	Amino_oxidase	1.83
PF12680	SnoaL_2	1.83
PF00144	Beta-lactamase	1.83
PF05974	DUF892	1.83
PF12831	FAD_oxidored	0.92
PF09924	LPG_synthase_C	0.92
PF02567	PhzC-PhzF	0.92
PF00296	Bac_luciferase	0.92
PF05239	PRC	0.92
PF13181	TPR_8	0.92
PF02894	GFO_IDH_MocA_C	0.92
PF00378	ECH_1	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	18.35
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.83
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.83
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.83
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	1.83
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.92
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.92
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.92

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.50 %
All Organisms	root	All Organisms	5.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.50 %
cellular organisms	root	All Organisms → cellular organisms	5.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.50 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Scaffold	Taxonomy	Length	IMG/M Link
3300004114\|Ga0062593_100016152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3752	Open in IMG/M
3300005294\|Ga0065705_10105525	All Organisms → cellular organisms → Bacteria	8085	Open in IMG/M
3300012204\|Ga0137374_10003712	All Organisms → cellular organisms → Bacteria	18077	Open in IMG/M
3300015371\|Ga0132258_10268488	All Organisms → cellular organisms → Bacteria	4180	Open in IMG/M
3300028791\|Ga0307290_10003403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5123	Open in IMG/M
3300031938\|Ga0308175_100127584	All Organisms → cellular organisms → Bacteria → Proteobacteria	2399	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.48%
Host-Associated	Host-Associated	27.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.30%
Plants	Host-Associated → Plants	27.52%
Aquatic	Environmental → Aquatic	9.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.84%
Sediment	Environmental → Aquatic → Sediment	5.50%
Freshwater	Environmental → Aquatic → Freshwater	3.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.01%
Loam	Environmental → Terrestrial → Soil → Loam	8.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.34%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.50%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	14.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.01%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.50%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	13.76%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.67%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026756	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10K2-12 (SPAdes)	Environmental	Open in IMG/M
3300027483	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A1-12 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1054200841	3300000364	Soil	GSGRPLGRCYDVRGELDASGLRVTGLVLGRRGFLEHLGIGAQASATSVRVRDADVVPWKDIVRFEEDRIVVRDSDE*
JGI10216J12902_1090309362	3300000956	Soil	MRTLSSVTRRKVVTESGESLGRCYDVRGELSGSGLRVKGLVIGRRGRLEHFGIGAQASASSTRVREGDVIPWEAVLRFEGDTVVVRDPWSAA*
JGI10216J12902_1114997562	3300000956	Soil	MRTLSSIRLRKVVTESGETLGRCYDLRGELSGSNLRVKGLVIGGRGRLEHFGIGAQASASSDRVRDGDVIPWEAVLRFEGDTIVVRDPWSAA*
soilH2_101640143	3300003324	Sugarcane Root And Bulk Soil	VTESGETLGRCHDVRGELGASKLRVTGLVLGRKGHLEHFGIGAQASASSARVRDSDVIPWKDIVRFEADRIVVRDR*
Ga0063454_1002421741	3300004081	Soil	LGRCYDVRAELTQSSLRITGLVVGRYGRLEHFGVRGQAGATSERVRDSDVIPWDAVLRFEEDTIVVRDPWKPA*
Ga0062593_1000161525	3300004114	Soil	LRTLTSLLNRQVVTESGRRLGHCHDLRAELTASKLRVTGLVLGQRGRLEHFGIGAQASASSAPIRDSDVIAWRDIVRFEEDRIVVRDSAGDD*
Ga0062593_1006185922	3300004114	Soil	VRTFTSLAGRSIVTDKGRDLGRCHDLRAELTRSSLRVTALVVGTHGWLEHFGIGAQASASSLPVRDRDTVPWQAIVRIEADRIVVRDDAMPDDP*
Ga0062593_1016461162	3300004114	Soil	VTESGSDLGRCHDVRAELGASRLRVTGLVLGRQGHLEHFGIGAQASASSARVRDSDLIEWKDIVRFEADRIVVRDSAEDA*
Ga0062589_1000672944	3300004156	Soil	RKIVTESGEALGRCHDVRAELGASRLRVTGLVLGRKGHLEHFGIGAQASASPARVRDTDVIPWKDVVRFEADRIVVRDGSDPRT*
Ga0062589_1005453582	3300004156	Soil	MRTLSSLRGRKIVTESGRELGRCHDVRAELGASRLRVTGLVVGRRGHLEHFGIGAEASASPERVRDSDLIAWKDIVGFEADRILVRDSAVDS*
Ga0062589_1028462341	3300004156	Soil	VRTFTSLAGRSIVTDKGRDLGRCHDLRAELTRSSLRVTALVVGTHGWLEHFGIDAQASASSLPVRDRNTVPWQAIVRIEADRIVVRDDAM
Ga0062590_1008325211	3300004157	Soil	MRAFTALVGRRIVTESGADLGHCHDLRAELAASSLRVTALVIGTRGWLEHFGIGAQASASRERVRDNDTLAWQAIVRIDGDQIIVRDDWANSTCPT*
Ga0062590_1011485532	3300004157	Soil	VRTLSSLRGRKIVTESGRELGRCHDVRAELGASRLRVTGVVLGRKGRLEHFGIGAEASASQGRVRDSDLIAWKDIVGFEADRILVRDSAVGE*
Ga0062590_1014813572	3300004157	Soil	MRTLSSLRGRKIVTESGRELGRCHDVRAELGASRLRVTGLVVGRRGHLEHFGIGAEASASPERVRDSDLIAWKDIVGFEADRILVRDSAVD
Ga0063356_1003176152	3300004463	Arabidopsis Thaliana Rhizosphere	MRTLSSLLGRKIVTESGSDLGRCHDVRAELGASRLRVTGLVLGRQGHLEHFGIGAQASASSARVRDSDLIEWKDIVRFEADRIVVRDSAEDA*
Ga0063356_1025216181	3300004463	Arabidopsis Thaliana Rhizosphere	MRTLTSLRRRKVVTESGRTLGRCHDVRGELDASGLHVTGLVLGHRGFLEHFGIGAQASATSVRVRNADVVPWKDIVRFEEDLIVVRDPDSDE*
Ga0062595_1000761683	3300004479	Soil	MRTLTSLRKRSVVTESGHTLGRCHDVRGELDTSRLRVTGLVLGRRGLLEHFGIGAQASASSVRLRDAHVVPWKDIVRFEAERIVVRDSTPTSRGKERRGQPGIEAG*
Ga0062592_1002358632	3300004480	Soil	MRTLSSLRGRKIVTESGRELGRCHDVRAELGASRLRVTGLVVGRRGHLEHFGIGAEASASPERVRDSDLIAWKDIVGFEADRILVRDSAVDD*
Ga0062591_1007608643	3300004643	Soil	VRTFTSLAGRSIVTDKGRDLGRCHDLRAELTRSSLRVTALVVGTHGWLEHFGIGAQASASSLPVRDRDTVPWQAIVRIEADRIVV
Ga0062591_1015349481	3300004643	Soil	MRTLSSLRGRKIVTESGRELGRCHDVRAELGASRLRVTGLVVGRRGHLEHFGIGAEASASPERVRDSDLIAWKDIVGFEADRILVRDSA
Ga0066683_104006322	3300005172	Soil	KPVRTLSSLVSRKVVSESGRSVGRCYDLRGELTSSALRVTGLVVGRRGWLEHFGIGAQASASSEKVRDIDTIPWSSVVRLEGDRIVVRDDAVPD*
Ga0065705_101055259	3300005294	Switchgrass Rhizosphere	VRTLSSLCGRKIVTEGGETLGRCHDVRAELGASRLRVTGLVLGRKGRLEHFGIGAQASASSARVRDTDVIPWKDVVGFEADRIVVRDSTSDG*
Ga0070676_100437245	3300005328	Miscanthus Rhizosphere	MRTLSSLLGRKIVTESGSDLGRCHDVRAELGASRLRVTGLVLGRRGHLEHFGIGAQASASSARVRDSDLIQWKDIVRFEADRIVVSDSAEEA*
Ga0070691_110458512	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VRTLSSLRGRKIVTESGRELGRCHDVRAELGASRLRVTGVVLGRKGRLEHFGIGAEASASQGRVRDSDLIAWKDIVGFEADRILVRDSAV
Ga0070692_105436831	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	LSSLLGRKIVTESGSDLGRCHDVRAELGASRLRVTGLVLGRRGHLEHFGIGAQASASSARVRDSDLIQWKDIVRFEADRIVVSDSAEEA*
Ga0070674_1007128013	3300005356	Miscanthus Rhizosphere	VRTLSSLRGRKIVTESGRELGRCHDVRAELGASRLRVTGVVLGRKGRLEHFGIGAEASASQGRVRDSDLIAWKDIVGFEADRILVRD
Ga0070673_1002405453	3300005364	Switchgrass Rhizosphere	VRTLSSLCGRKIVTESGETLGRCHDVRAELGASRLRVTGLVLGRKGHLEHFGIGAQASASAERVRDTDVVPWKDIVRFE
Ga0070700_1000325633	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRTLSSLLGRKIVTESGSDLGRCHDVRAELGASRLRVTGLVLGRQGHLEHFGIGAQASASSARVRDSDLIQWKDIVRFEADRIVVSDSAEEA*
Ga0070663_1008650781	3300005455	Corn Rhizosphere	GSDLGRCHDVRAELGASRLRVTGLVLGRRGHLEHFGIGAQASASSARVRDSDLIQWKDIVRFEADRIVVSDSAEEA*
Ga0070662_1006414791	3300005457	Corn Rhizosphere	MRTLSSLLGRKIVTESGSDLGRCHDVRAELGASRLRVTGVVLGRKGRLEHFGIGAEASASQGRVRDSDLIAWKDIVGFEADRILVRDSAVGE*
Ga0070679_1008783452	3300005530	Corn Rhizosphere	MRTLSSLRGRKIVTESGRELGRCHDVRAELGASRLRVTGVVLGRKGRLEHFGIGAEASASQGRVRDSDLIAWKDIVGFEADRILVRDSAVGE*
Ga0070686_1005438643	3300005544	Switchgrass Rhizosphere	VRTLSSLCGRKIVTESGETLGRCHDVRAELGASRLRVTGLVLGRKGHLEHFGIGAQASASAERVRDTDVIPWKDIV
Ga0070693_1012953921	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MRTLSSLLGRKIVTESGSDLGRCHDVRAELGASRLRVTGLVLGRQGHLEHFGIGAQASASSARVRDSDLIEWKDIVRFEADRIVVRDSAED
Ga0066698_101804232	3300005558	Soil	VRTLSSLRKREIVTERGRSLGRCHDLRAELTASSLRVTALVVGRRGLLEHFGVGAQASASPDGVRDVDTVPWEAIVRIEGDRIVVRDDVDPAHR*
Ga0066698_104174441	3300005558	Soil	VRTLSSLVRRRIVTESGRSLGRCYDLRAELTSSSLRVTGLVVGRRGWLEHFGIGAQASATPTRVRDIDTIPWDAVVRLERDRIVVRDDAAS*
Ga0070702_1004834111	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	RQMRTLSSLRGRKIVTESGRELGRCHDVRAELGASRLRVTGVVLGRKGRLEHFGIGAEASASQGRVRDSDLIAWKDIVGFEADRILVRDSAVGE*
Ga0068866_103497002	3300005718	Miscanthus Rhizosphere	SLRGRKIVTESGRELGRCHDVRAELGASRLRVTGVVLGRKGRLEHFGIGAEASASQGRVRDSDLIAWKDIVGFEADRILVRDSAVGE*
Ga0081455_100562544	3300005937	Tabebuia Heterophylla Rhizosphere	MRTLSSIRRRKVVTESGRTLGRCHDVRAELYASKLSVTGLVLGRTGRLEHFGIGAQAGASSARVRDSDVIPWSDVLRFEEDRIVVRDRPDH*
Ga0081539_100082276	3300005985	Tabebuia Heterophylla Rhizosphere	MRTLSSIVRRKVVTEDGGDLGRCYDVRGELSRSGLKVKGLVIGRRGRLEHLGIGAQASASSNRVRDGDVIPWEAIVRFERDTIVVRDPWSKT*
Ga0068865_1003791771	3300006881	Miscanthus Rhizosphere	RRPAASVDRAHPGGRQVRTLSSLRGRKIVTESGRELGRCHDVRAELGASRLRVTGVVLGRKGRLEHFGIGAEASASQGRVRDSDLIAWKDIVGFEADRILVRDSAVGE*
Ga0066710_1000644232	3300009012	Grasslands Soil	VRTLSSLVSRKVVSESGRSVGRCYDLRGELTSSALRVTGLVVGRRGWLEHFGIGAQASASSEKVRDIDTIPWSSVVRLEGDRIVVRDDAVPE
Ga0066710_1009973342	3300009012	Grasslands Soil	MRTLSSLRGRKIETESGRSLGRCHDLRAELTSSALRVTGLVIGRRGRLEHYGIGAQASASAARVRHVDVVPWEAVLRIEGDRIVVRDDTAPGE
Ga0105245_100954364	3300009098	Miscanthus Rhizosphere	LCGRKIVTESGEALGRCHDVRAELGASRLRVTGLVLGRKGHLEHFGIGAQASASAERVRDTDVIPWKDIVRFEADRIVVRDRDR*
Ga0066709_1002578853	3300009137	Grasslands Soil	MRTLSSLRGRKIETESGRSLGRCHDLRAELTSSALRVTGLVIGRRGRLEHYGIGAQASASAARVRDVDVVPWEAVLRIEGDRIVVRDDTAPGE*
Ga0111538_112781651	3300009156	Populus Rhizosphere	MRRFTSLVGRRIVTESGADLGRCHDLRGELTASSLRVTALVVGTHGWLEHFGIGAQASASPQRVRDKDTVPWQSVVRIDGDQIV
Ga0105248_102834001	3300009177	Switchgrass Rhizosphere	LCGRKIVTESGEALGRCHDVRAELGASRLRVTGLVLGRKGHLEHFGIGAQASASAERVRDTDVIPWKDIVRFEAGRIVVRDRDR*
Ga0105237_123236962	3300009545	Corn Rhizosphere	GRKIVTESGETLGRCHDVRAEIGASRLRVTGLVLGRKGHLEHFGIGAQASASAERVRDTDVIPWKDIVRFEADRIVVRDPDR*
Ga0126307_117263222	3300009789	Serpentine Soil	MRTFSSLKNRQVVTEGGRKLGRCHDLRGELTSSSLRVTALVVGRQGLLEHFGVGAQASATPARVRDVDTVSWGAVARIEGERIVVRDDAAPGA*
Ga0126305_100589482	3300010036	Serpentine Soil	MRTFSSLKNRQVVTEGGRKLGRCHDLRGELTSSSLRVTALVVGRQGLLEHFGVGAQASATPARVRDVDTVPWSAVARIEGERIVVRDDAAPGA*
Ga0126304_110483391	3300010037	Serpentine Soil	WVAPMRTLTSFHKRQIVTESGRKLGRCHDVRAELLPTGLQVIGLVVGRHGRFEHFGIAGQASASSARVRDSDVVPWEGIVRLDGELIVVRDDAVPTE*
Ga0126309_104724462	3300010039	Serpentine Soil	MRTLSSIRNRKVVTEGGRKLGKCFDVRSELTKSSLRVTGLVVGRLGRLEHFGIRGQASASSGRVRDEDVIPWEAIVRFEQDHIVVRDDAAPD*
Ga0126321_11179272	3300010145	Soil	MDSGVESVRTLSSIVRRKVVTESGGHLGHCYDVRGELTTSRLRVTGLVIGRRGRLEHFGIGAQASASSNRVRDGDVIPWEAIIRFEADTIVVRDPWSQP*
Ga0126321_12395961	3300010145	Soil	MRTFSSLKNRQVVTEGGRKLGRCHDLRGELSSSSLRVTALVVGRRGFLEHLGVGAQASATPARVRDVNTVPWGAVVRIE
Ga0126321_14161581	3300010145	Soil	SIVRRKVVTENGGDLGRCYDVRGELTQSRLTVKGLVIGRRGHLEHFGIGAQASASSNRVRDGDVIPWEAIVRFEADTIVVRDPWSEP*
Ga0126306_106483862	3300010166	Serpentine Soil	MRTLTSFHKRQIVTESGRKLGRCHDVRAELLPTGLQVIGLVVGRHGRFEHFGIAGQASASSARVRDSDVVPWEGIVRLDGELIVVRDDAVPTE*
Ga0126306_114217262	3300010166	Serpentine Soil	VRREVVTESGEKLGRCYDVRGELSRSRLKVTGLVIGRRGRLEHFGIGAQASASSNRVRDGDVIPWEAVVRFDGDTIVVRGPWSET*
Ga0137374_1000371210	3300012204	Vadose Zone Soil	MRTFSSLKNRQVVTDGGRKLGRCHDLRGELSSSSLRVTALVVGRQGFLEHFGVGAQASATPARVRDVNTVPWGAVVRIESDRVVVRDDAAPGVRA*
Ga0137374_102063612	3300012204	Vadose Zone Soil	MRTFSSLKNRKVVTEGGRKLGRCHDLRGELTSSSLRVTALVVGRQGFLEHFGVGAQASATPARVRDVDTVPWAAVVRIERDRLVVRDDAAPGSS*
Ga0137374_106773862	3300012204	Vadose Zone Soil	MRTFSSLKNRQVVTEGGRKLGRCHDLRGELTSSSLRATALVVGRQGFLEHFGVGAQASATPARMRDVDTVPWTAVVRIEGERIVVRDDAAPGA*
Ga0137371_101122302	3300012356	Vadose Zone Soil	VRTLSSLVSRKVVSESGRSVGRCFDLRGELTSSALRVTGLVVGRRGWLEHFGIGAQASASSEKVRDIDTIPWSSVVRLEGDRIVVRDDAVPE*
Ga0157285_100087873	3300012897	Soil	MRTLSSLRGRKIVTESGRELGRCHDVRAELGASRLRVTGLVVGRRGHLEHFGIGAEASASPDRVRDSDLIAWKDIVGFEADRILVRDSAVDR*
Ga0157297_101030152	3300012914	Soil	VTDKGRDLGRCHDLRAELTRSSLRVTALVVGTHGWLEHFGIGAQASASSLPVRDRDTVPWQAIVRIEADRIVVRDDAMPDDP*
Ga0182001_100407502	3300014488	Soil	MRTLSSIVRRKVVTESGEELGRCFDVRGELKQSRLEVKGLVIGRRGRLEHFGIGAQAGASSERVRDADVIPWEAIIRFEADTIVVRDPWSQT*
Ga0173483_107662842	3300015077	Soil	VNESGETLGRCHDVRAELGASRLRVTGLVLGRKGHLEHFGIGAQASASAERVRDTDVIPWKDIVRFEADRIVVRDPDR*
Ga0173478_107500962	3300015201	Soil	SAAVRTFTSLAGRSIVTDKGRDLGRCHDLRAELTRSSLRVTALVVGTHGWLEHFGIGAQASASSLPVRDRDTVPWQAIVRIEADRIVVRDDAMPDDP*
Ga0132258_102684886	3300015371	Arabidopsis Rhizosphere	MRTLSSLRGRKIVTESGRELGRCHDVRAELGASRLRVTGLVLGRKGRLEHFGIRAEASASQGRVRDSDLIAWKDVVGFGADRILVRDSAVGD*
Ga0132255_1001342294	3300015374	Arabidopsis Rhizosphere	MRTLSSLRGRKIVTEGGRELGRCHDVRAELGASRLRVTGLVLGRKGRLEHFGIGAEASASEGRVRDSDLIAWKDIVRFEADRIVVRDPAVGE*
Ga0184610_11710482	3300017997	Groundwater Sediment	MRTFSSLKNRQVVTEGGRKLGRCHDLRGELSSSSLRVTALVVGRQGFLEHFGVGAQASATPARVRDVNTVPWGAVVRIEGDRVVVLDDAAPGTRA
Ga0184604_101821892	3300018000	Groundwater Sediment	MRTFSSLKNRQVVTEGGRKLGRCHDLRGELTASSLRVTALVVGRLGFLEHFGVGAQASATPARVRDVDTVPWNAVVRIEGERIVVRDDAAPGA
Ga0184605_100019249	3300018027	Groundwater Sediment	VRTLSSLHRRKVVTEGGQDLGRCHDLRAELGTSRLRITALVIGRTGFLEHFGIGAQASASPARVPDTDVIPWEAILRFEGNRIVVRDPWKTD
Ga0184608_100200242	3300018028	Groundwater Sediment	MRAFSSLKNLQVVTEGGRKLGRCHDLRGELTASSLRVTALLVGRRGFLEHFGVGAQASATPARVRDVDTVPWSAVVRIEGDRVVVRDDAAPGARA
Ga0184609_102890202	3300018076	Groundwater Sediment	MRTFSSLKNRQVVTEGGRKLGRCHDLRGELSSSSLRVPALVVGRQGFLEHFGVGAQASATPARVRDVNTVPWGAVVRIEGDRVVVLDDAAPGTRA
Ga0190270_100033474	3300018469	Soil	VRTLSSLCGRKIVTEGGETLGRCHDVRAELGASRLRVTGLVLGRKGRLEHFGIGAQASASSARVRDTDVIPWKDVVGFEADQIVVRDSTADG
Ga0190270_114341632	3300018469	Soil	MRTFSSLKSRQVVTEGGRKLGRCHDLRGELTSSSLRVTALVVGRQGFLEHFGVGAQASATPARVRDVNTVPWGAVVRIEGDRVVVRDDAAPGTRA
Ga0173481_107809081	3300019356	Soil	IVTESGRDLGRCHDVRAELGASRLRVTGLVLGRRGHLEHFGIGAQASASSARVRDSDLIEWKDIVRFEADRIVVRDSAEDA
Ga0210381_100272742	3300021078	Groundwater Sediment	VRTLSSLRRRKIVTESGRTLGRCHDLRAELGASSLRVTGLVLGRRGRLEHFGIGAQASASSVRVRDTDVIPWEHVVRFEEDRIVVTDSAAEHVSKGEKQRPRN
Ga0222622_100181321	3300022756	Groundwater Sediment	VRTLSSLCGRKIVTESGEALGRCHDVRAELTASRLRVTGLVLGRKGHLEHFGIGAQASASSARVRDTDVIPWKDV
Ga0207688_101628603	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRTLSSLLGRKIVTESGSDLGRCHDVRAELGASRLRVTGLVLGRRGHLEHFGIGAQASASSARVRDSDLIQWKDIVRFEADRIVVSDSAEEA
Ga0207690_103101002	3300025932	Corn Rhizosphere	MRTLSSLRGRKIVTESGRELGRCHDVRAELGASRLRVTGVVLGRKGRLEHFGIGAEASASQGRVRDSDLIAWKDIVGFEADRILVRDSAVGE
Ga0207690_110521981	3300025932	Corn Rhizosphere	MRTLTSLRRRKVVTESGRTLGRCHDVRGELDASGLHVTGLVLGHRGFLEHFGIGAQASATSVRVRNADVVPWKDIVRFEEDLIVVRDPDSDE
Ga0207686_113549561	3300025934	Miscanthus Rhizosphere	MRTLSSLLGRKIVTESGSDLGRCHDVRAELGASRLRVTGLVLGRRGHLEHFGIGAQASASSARVRDSDLIQWKDIVRF
Ga0207704_110820152	3300025938	Miscanthus Rhizosphere	SSLRGRKIVTESGRELGRCHDVRAELGASRLRVTGVVLGRKGRLEHFGIGAEASASQGRVRDSDLIAWKDIVGFEADRILVRDSAVGE
Ga0207640_117623221	3300025981	Corn Rhizosphere	KIVTESGRELGRCHDVRAELGASRLRVTGVVLGRKGRLEHFGIGAEASASQGRVRDSDLIAWKDIVGFEADRILVRDSAVGE
Ga0207640_119355142	3300025981	Corn Rhizosphere	VRTLSSLCGRKIVTESGEALGRCHDVRAELGASRLRVTGLVLGRKGHLEHFGIGAQASASAERVRDTDVIPWKDIVRFEAGRI
Ga0207639_114509212	3300026041	Corn Rhizosphere	NESGEALGRCHDVRAELAASRLRVTGLVLGRKGYLEHFGIGAQASASSARVRDTDVIPWKDVVRFEADRIVVRDSTADE
Ga0207678_109489662	3300026067	Corn Rhizosphere	GRKIVTESGSDLGRCHDVRAELGASRLRVTGLVLGRRGHLEHFGIGAQASASSARVRDSDLIQWKDIVRFEADRIVVSDSAEEA
Ga0207708_100280333	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRTLSSLLGRKIVTESGSDLGRCHDVRAELGASRLRVTGLVLGRQGHLEHFGIGAQASASSARVRDSDLIQWKDIVRFEADRIVVSDSAEEA
Ga0207577_1022242	3300026756	Soil	MRTLSSLLGRKIVTESGSDLGRCHDVRAELGASRLRITGLVLGSRGHLEHFGIGAQASASSARVRDSDLIPWKDIVGFEADRILVRDSAVGE
Ga0207637_10034571	3300027483	Soil	GSRQVRTLSSLRGRKIVTESGRELGRCHDVRAELGASRLRVTGVVLGRKGRLEHFGIGAEASASQGRVRDSDLIAWKDIVGFEADRILVRDSAVDS
Ga0268265_123497341	3300028380	Switchgrass Rhizosphere	PGSREMRTLSSLLGRKIVTESGSDLGRCHDVRAELGASRLRVTGLVLGRRGHLEHFGIGAQASASSARVRDSDLIQWKDIVRFEADRIVVSDSAEEA
Ga0247828_100868772	3300028587	Soil	MRTLSSLRGRKIVTESGRELGRCHDVRAELGASRLRVTGLVLGRRGHLEHFGIGAQASASSARVRDSDLIAWKDIVGFEADRILVRDSAVGE
Ga0307293_100206663	3300028711	Soil	MRTFSSLKNRQVVTEGGRKLGRCHDLRGELSSSSLRVTALVVGRQGFLEHFGVGAQASATPARVRDVNTVPWGAVVRIEGDRVVVRDDAAPGTRA
Ga0307313_102584832	3300028715	Soil	VRTLSSLRRRKIVTESGRTLGRCHDLRAELGASSLRVTGLVLGRRGRLEHFGIGAQASASSARVRDTDVIPWEEVVRLEGD
Ga0307315_102253742	3300028721	Soil	TESGETLGRCHDVRAELGASRLRVTGLVLGRKGHLEHFGIGAQASASSARVRDTDVVPWKDIVRFEADRIVVRDSEAQ
Ga0307318_101506293	3300028744	Soil	MRTFSSIKNRKVVTEGGRKLGRCHDLRGELSSSSLRVTALVVGRRGFLEHFGVGAQASATPARVRDVDTVPWSAVVRIEGDRVVVHDDAAPKR
Ga0307320_100507723	3300028771	Soil	MRTFSSLKNRKVVTEGGRKLGRCHDLRGELSSSSLRVTALVVGRRGFLEHFGVGAQASATPARVRDVDTVPWSAVVRIEGDRVVVRDDDAAPKR
Ga0307290_100034031	3300028791	Soil	VRTLSSLRRRKIVTESGRTLGRCHDLRAELGASSLRVTGLVLGRRGRLEHFGIGAQASASSVRVRDTDVIPWEHVVRFEEDRIVVT
Ga0307290_101002933	3300028791	Soil	VTEGGRKLGHCHDLRGELTSSSLRVTALVVGRQGFLEHFGVGAQASATPARVRDVNTVPWGAVVRIEGDRVVVRDDAAPGTRA
Ga0307299_100127161	3300028793	Soil	VRTLSSLRRRKIVTESGRTLGRCHDLRAELGASSLRVTGLVLGRRGRLEHFGIGAQASASSARVRDTDVIPWEEVVRLEGDRIIVRD
Ga0307284_103388932	3300028799	Soil	IVTESGRTLGRCHDLRAELGASSLRVTGLVLGRRGRLEHFGIGAQASASSARVRDTDVIPWEEVVRLEGDRIIVRDSAAEEA
Ga0307292_100426571	3300028811	Soil	MRTFSSLKNRQVVTEGGRKLGHCHDLRGELSSSSLRVTALVVGRQGFLEHFGVGAQASATPARVRDVNTVPWGAVVRIEGDRVVVRDDAAPGTRA
Ga0307302_102428713	3300028814	Soil	MRTFSSLKNRKVVTEGGRKLGRCHDLRAELSSSSLRVTALVVGRQGFLEHFGVGAQASATPARVRDVDTVPWSAVVRIEADRVVVRDDAAPGARA
Ga0307278_100387853	3300028878	Soil	MRTFSSLKNRQVVTEGGRKLGRCHDLRGELSSSSLRVTALVVGRQGFLEHFGVGAQASATPARVRDVDTVPWSAVVRIEGDRVVVRDDAAPGARA
Ga0307278_102451792	3300028878	Soil	VTESGQKLGRCHDVRGELGASRLRVTGLVLGRTGRLEHFGIGAQASASSVRVRDTDVIPWEHVVRFEEDKIVVTDSAAEHVSKGEKQRPRN
Ga0307408_1002908733	3300031548	Rhizosphere	VTESGEALGRCHDVRAELGASRLRVTGLVLGRKGHLEHFGIGAQASASSARVRDTDVIPWKDIVRFEADRIVVRDSVRRPGEG
Ga0307408_1006795722	3300031548	Rhizosphere	MRTFSSLKNRQVVTEGGRKLGRCHDLRGELTASSLRVTALVVGRQGLLEHFGVGAQASATPARVRDVNTVAWSAVVRIEGERIVVRDDAAPGA
Ga0308175_1001275841	3300031938	Soil	VRTLSSLCGRKIVTESGETLGRCHDVRAKLGASRLRVTGLVLGRKGYLEHFGIGAQASATRARVRDTDVIPWKD
Ga0310884_108301241	3300031944	Soil	VRTLSSLCGRKIVSESGETLGRCHDVRAELGASRLRVTGLVLGRKGRLEHFGIGAQASASTERVRDTDVILWKDIVRFEADRIVVRDSTADG
Ga0307409_1003316482	3300031995	Rhizosphere	VRTLSSLCGRRIVTESGETLGRCHDVRAELGASTLRVTGLVLGRRGHLEHFGIGAQASASSARVRDTDIVPWKDIVRFEANRIVVRDSVRRPGQG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088400

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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