Metagenome Family F088254

Basic Information
Family ID	F088254
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	45 residues
Representative Sequence	MNEKILKEILQELKNIHFHLDNLEVFYKFVNRVEMKKEEIAEDKK
Number of Associated Samples	52
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	86.24 %
% of genes near scaffold ends (potentially truncated)	12.84 %
% of genes from short scaffolds (< 2000 bps)	86.24 %
Associated GOLD sequencing projects	47
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (88.991 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (19.266 % of family members)
Environment Ontology (ENVO)	Unclassified (20.183 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (47.706 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78. 1Ga0052246_10061662 2Ga0052244_10069772 3Ga0066636_101527991 4Ga0075122_100087415 5Ga0075122_101092241 6Ga0075116_100493702 7Ga0075116_103192772 8Ga0075125_100414923 9Ga0075125_102336541 10Ga0075125_102492642 11Ga0075124_100528632 12Ga0075124_101721361 13Ga0075124_103217282 14Ga0075123_103168701 15Ga0100378_12757502 16Ga0100392_12260272 17Ga0100403_11123062 18Ga0100403_12158822 19Ga0100403_12619901 20Ga0115371_106258001 21Ga0115371_108669242 22Ga0115371_108825392 23Ga0115371_109149202 24Ga0100377_12011522 25Ga0114918_101024143 26Ga0114918_101096583 27Ga0114918_102278782 28Ga0114919_108836501 29Ga0114919_112132671 30Ga0163202_10080993 31Ga0164313_110729071 32Ga0180008_14208932 33Ga0180007_100381521 34Ga0180007_102239732 35Ga0180007_103851952 36Ga0180009_101636873 37Ga0180009_103011062 38Ga0180732_10441252 39Ga0180732_10666882 40Ga0180732_11006433 41Ga0180732_12112661 42Ga0212124_102347902 43Ga0222679_10004343 44Ga0222685_10077931 45Ga0222700_10739112 46Ga0222703_10470202 47Ga0222684_10452692 48Ga0222684_10892142 49Ga0210003_100291216 50Ga0210003_10914012 51Ga0210043_11420642 52Ga0210056_11245713 53Ga0210049_10821463 54Ga0208905_10433022 55Ga0208905_10835761 56Ga0208905_11734841 57Ga0208905_12032602 58Ga0207997_10595523 59Ga0207997_10991362 60Ga0210004_10587842 61Ga0210051_12030562 62Ga0307928_101597492 63Ga0307928_102810941 64Ga0307928_103145642 65Ga0307928_103240531 66Ga0307928_103866372 67Ga0307427_10742102 68Ga0307434_10214193 69Ga0307434_10347181 70Ga0307434_10926452 71Ga0307380_1001353510 72Ga0307380_102008293 73Ga0307380_106779431 74Ga0307380_109966851 75Ga0307380_110912622 76Ga0307379_110337822 77Ga0307379_114412762 78Ga0307378_105498952 79Ga0307378_106002511 80Ga0307378_111855652 81Ga0307376_100112406 82Ga0307376_103192602 83Ga0307376_105687311 84Ga0307375_106973651 85Ga0307377_103081463 86Ga0307377_105836992 87Ga0307377_107825001 88Ga0307377_109492182 89Ga0315293_1000033069 90Ga0315288_100221133 91Ga0315288_100448026 92Ga0315288_104173863 93Ga0315288_109249472 94Ga0315285_102231402 95Ga0315285_103225182 96Ga0315285_104191102 97Ga0315294_104656503 98Ga0315274_1000979814 99Ga0315274_104931873 100Ga0315274_108334032 101Ga0315296_100104984 102Ga0315296_102166712 103Ga0315296_102689723 104Ga0315296_105111132 105Ga0315296_105448991 106Ga0315289_101261364 107Ga0315289_104125623 108Ga0315295_113473222 109Ga0315295_117658501
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78. 1Ga0052246_10061662 2Ga0066636_101527991 3Ga0075122_100087415 4Ga0075122_101092241 5Ga0075125_102336541 6Ga0075125_102492642 7Ga0100403_12158822 8Ga0115371_108825392 9Ga0114918_101024143 10Ga0114919_108836501 11Ga0163202_10080993 12Ga0180008_14208932 13Ga0180007_100381521 14Ga0180732_11006433 15Ga0180732_12112661 16Ga0222684_10452692 17Ga0208905_10835761 18Ga0208905_11734841 19Ga0210004_10587842 20Ga0307434_10347181 21Ga0307380_102008293 22Ga0307379_114412762 23Ga0307376_105687311 24Ga0307377_105836992 25Ga0315288_100221133
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44. 1Ga0100403_12619901 2Ga0052246_10061662 3Ga0075122_100087415 4Ga0075122_101092241 5Ga0075125_102336541 6Ga0075124_103217282 7Ga0115371_108669242 8Ga0115371_108825392 9Ga0115371_109149202 10Ga0114918_101096583 11Ga0114919_108836501 12Ga0114919_112132671 13Ga0180008_14208932 14Ga0180007_102239732 15Ga0180007_103851952 16Ga0180009_101636873 17Ga0180009_103011062 18Ga0180732_10666882 19Ga0180732_11006433 20Ga0180732_12112661 21Ga0222703_10470202 22Ga0210003_100291216 23Ga0210043_11420642 24Ga0208905_10433022 25Ga0208905_11734841 26Ga0207997_10595523 27Ga0210004_10587842 28Ga0307928_102810941 29Ga0307434_10214193 30Ga0307434_10347181 31Ga0307434_10926452 32Ga0307380_1001353510 33Ga0307380_102008293 34Ga0307380_110912622 35Ga0307379_110337822 36Ga0307378_105498952 37Ga0307378_106002511 38Ga0307376_100112406 39Ga0307377_105836992 40Ga0307377_107825001 41Ga0315293_1000033069 42Ga0315288_100221133 43Ga0315288_100448026 44Ga0315288_104173863 45Ga0315288_109249472 46Ga0315285_103225182 47Ga0315294_104656503 48Ga0315296_100104984 49Ga0315296_102166712 50Ga0315289_104125623 51Ga0315295_113473222
Powered by MSAViewer

Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.53% β-sheet: 0.00% Coil/Unstructured: 42.47%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
Powered by PDBe Molstar

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF07460	NUMOD3	4.59
PF14279	HNH_5	1.83
PF00085	Thioredoxin	1.83
PF13614	AAA_31	0.92
PF02511	Thy1	0.92
PF04473	DUF553	0.92
PF12728	HTH_17	0.92
PF01844	HNH	0.92
PF04002	RadC	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	0.92
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	0.92

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	11.01 %
Unclassified	root	N/A	88.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	10.09 %
Unclassified	root	N/A	88.99 %
Viruses	superkingdom	All Organisms → Viruses	0.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %
Unclassified	root	N/A	88.99 %

Name	Rank	Taxonomy	Distribution
Atribacterota	phylum	All Organisms → cellular organisms → Bacteria → Atribacterota	5.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %
Unclassified	root	N/A	88.99 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %
Unclassified	root	N/A	88.99 %
unclassified Atribacterota	no rank	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota	4.59 %

Name	Rank	Taxonomy	Distribution
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	3.67 %
Candidatus Atribacteria bacterium HGW-Atribacteria-1	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium HGW-Atribacteria-1	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %
Unclassified	root	N/A	88.99 %

Scaffold	Taxonomy	Length	IMG/M Link
3300003141\|Ga0052246_1006166	Not Available	1507	Open in IMG/M
3300003144\|Ga0052244_1006977	Not Available	1267	Open in IMG/M
3300005236\|Ga0066636_10152799	Not Available	1088	Open in IMG/M
3300005915\|Ga0075122_10008741	All Organisms → cellular organisms → Bacteria	5525	Open in IMG/M
3300005915\|Ga0075122_10109224	Not Available	1056	Open in IMG/M
3300005918\|Ga0075116_10049370	Not Available	1739	Open in IMG/M
3300005918\|Ga0075116_10319277	Not Available	562	Open in IMG/M
3300005935\|Ga0075125_10041492	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	2089	Open in IMG/M
3300005935\|Ga0075125_10233654	Not Available	746	Open in IMG/M
3300005935\|Ga0075125_10249264	Not Available	716	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	83.49%
Terrestrial	Environmental → Terrestrial	16.51%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	41.28%
Marine	Environmental → Aquatic → Marine	12.84%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	25.69%
Sediment	Environmental → Aquatic → Sediment	3.67%
Soil	Environmental → Terrestrial → Soil	16.51%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	16.51%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	20.18%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.92%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.67%
Lake	Environmental → Aquatic → Freshwater → Lake	21.10%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.83%
Oceanic	Environmental → Aquatic → Marine → Oceanic	6.42%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	25.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.67%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	3.67%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	19.27%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	6.42%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.92%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	25.69%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	20.18%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	16.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.83%

Habitat	Taxonomy	Distribution
Aquifer	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer	6.42%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	6.42%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	13.76%
Lake Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Lake Water	6.42%
Marine Sediment	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Sediment	1.83%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.92%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	7.34%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	1.83%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	10.09%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	3.67%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	19.27%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	3.67%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	16.51%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003141	Marine sediment microbial communities from deep subseafloor of Shimokita Peninsula, Japan - 107 mbsf	Environmental	Open in IMG/M
3300003144	Marine sediment microbial communities from deep subseafloor - Sample from 18.6 mbsf	Environmental	Open in IMG/M
3300005236	Groundwater microbial communities from aquifer - Crystal Geyser CG07_land_8/20/14_0.80	Environmental	Open in IMG/M
3300005915	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKB	Environmental	Open in IMG/M
3300005918	Saline lake microbial communities from Ace Lake, Antarctica- Antarctic Ace Lake Metagenome 02UKC	Environmental	Open in IMG/M
3300005935	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKN	Environmental	Open in IMG/M
3300005936	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKS	Environmental	Open in IMG/M
3300005939	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKX	Environmental	Open in IMG/M
3300008085	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-02	Environmental	Open in IMG/M
3300008095	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-16	Environmental	Open in IMG/M

Showing 1 to 10 of 52 entries

Previous1 2 3 4 5 6Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0052246_10061662	3300003141	Marine Sediment	MNEKILKEILQELKDIHFHLDELSIFYKFVNRVEMKKEEVKKEIVEDKK*
Ga0052244_10069772	3300003144	Marine Sediment	MNEKILKEILQELKAIHFHLDELSIFYKFVNRVEMKKEEVKKEIVEDKK*
Ga0066636_101527991	3300005236	Groundwater	MNEKILAEILQEFKNIHFHLNNLETLYKFTNKVEIRKENTTENKK*
Ga0075122_100087415	3300005915	Saline Lake	MNEKILKEILQELKEIHDHLNNIEVLYKFTNRVEMKKEEVPKDKKE*
Ga0075122_101092241	3300005915	Saline Lake	MNEKILKEILQELKNIHCHLDRLDIGYMMVNRIEIKEKEKPEDKKE*
Ga0075116_100493702	3300005918	Saline Lake	MSEKILNEILQELKGIHDHLNIIETLYKYVNRVEMKKEEVPKDKK*
Ga0075116_103192772	3300005918	Saline Lake	MSEKILKEILQELKEIHDHLNNLEVLYKFTNRVEMKKEEVPKDKKE*
Ga0075125_100414923	3300005935	Saline Lake	MNEKILKEILQELKGIHDHLNIIETLYKYVNRVEMKKEEVPKNKK*
Ga0075125_102336541	3300005935	Saline Lake	MEKILKEILQELKGIHDHLNIIETLYKYVNRVEIKKED
Ga0075125_102492642	3300005935	Saline Lake	MNEKILEEILQEIKNVHHHLENIETLYKFTNRVEIKKEVEKKEITEDKK*
Ga0075124_100528632	3300005936	Lake Water	MNEKILKEILEELKEIHDHLNTFEALYKFVNRVEMKKEEVPKDKK*
Ga0075124_101721361	3300005936	Lake Water	MSEKILNEILQELKGIHDHLNIIETLYKYVNRVEMKKEEVPK
Ga0075124_103217282	3300005936	Lake Water	MEKILKEILQELKNIHCHLDNLETLYKFTNRVEMKKEEVPKDKK*
Ga0075123_103168701	3300005939	Saline Lake	MNEKILKEILQELKEIHSHLNNLETLYKFTNRVEMKKEEVPKDKKE*
Ga0100378_12757502	3300008085	Aquifer	MNEKILAEILQELKNIHFHLDNLEVFYKFVNRVEMKKEETTEDKK*
Ga0100392_12260272	3300008095	Aquifer	MNEEILKEILQELKNIHFHLDNLETLYKFTNKVEIRKENTTENKK*
Ga0100403_11123062	3300008255	Aquifer	MNEKILAEILQELKNIHFHLDNLEVFYKFVNRVEMKKEETTENKK*
Ga0100403_12158822	3300008255	Aquifer	MNGKILKEILQELKDIHYHLDCLETFYKFVNRVEMKKEITQ*
Ga0100403_12619901	3300008255	Aquifer	MNEKILKEILQELKNIHFHLDNLEVFYKFVNRVEMKKEEIAEDKK*
Ga0115371_106258001	3300008470	Sediment	MDEKILKELLQELKEIHDHLNNLESLYKFTNRVEMKKEEVPKDKKE*
Ga0115371_108669242	3300008470	Sediment	MDEKILKEILQELKNIHFHLDNMETLYKFTNRVEIKKEEVPEDKKE*
Ga0115371_108825392	3300008470	Sediment	MNEKIFKEILEELKNVHHHLENIETLYKFTNRVEMKKEENKEDENPQ*
Ga0115371_109149202	3300008470	Sediment	MEKILKEILEELKNIHYHLDGLETLYKFVNRVEMKKEEVKEEIVKDKKE*
Ga0100377_12011522	3300009004	Aquifer	MNEEILKEILQELKNIHFHLDNLEVFYKFVNRVEMKKEETTEDKK*
Ga0114918_101024143	3300009149	Deep Subsurface	MNDELLKEILQELKNIHFHLDNLETLYKFTNRVEIKKEEIKEDKK*
Ga0114918_101096583	3300009149	Deep Subsurface	MNEKILREILQELKNIHFHLGNLESLYKFTNRVEMKKEEIPKDKIKDKK*
Ga0114918_102278782	3300009149	Deep Subsurface	MNEKILKEILEELKNIHSHLDNFEVFYKFVNRVEMKKGEITKDKK*
Ga0114919_108836501	3300009529	Deep Subsurface	MNEKILREILEELKNIHFHLDNLESLYKFTNRVEMKGETKKEIKGKEIIEDKK*
Ga0114919_112132671	3300009529	Deep Subsurface	MEEILREILEELKNIHSHLDNFEVFYKFVNRVEMKGETKKEIKEKEIIEDKK*
Ga0163202_10080993	3300013086	Freshwater	MEKLLKEILQEIKDIHSHLNDLDSLYKFVNRVEMKKEEIKVEK*
Ga0164313_110729071	3300013101	Marine Sediment	MNEKILKEILQELKNIHYHLDNLETLYKFTNRVEIKKEEIKEDKK*
Ga0180008_14208932	3300014613	Groundwater	MEEILKEILQELKNIHSHLETLESFYMFVNRVEMKKEEIPENKK*
Ga0180007_100381521	3300014656	Groundwater	MEELLKEILQELKDMHSHLDNLESLYKFTNRVEMKKEEVKKEIVEDKK
Ga0180007_102239732	3300014656	Groundwater	MEKILKEILQEIKDIHSHLNDLDSLYKFVNRVEMKKEEIKEDKK*
Ga0180007_103851952	3300014656	Groundwater	MNEKILKEILKELKNIHYHLDRLDAFYIMVNKIEIKENEIVEDKK*
Ga0180009_101636873	3300015370	Groundwater	MSEKILKEILEELKNIHSHLNNLETFYMYVNRVEMKKEEITEDKK*
Ga0180009_103011062	3300015370	Groundwater	MKDELLKEILQELKDMHSHLDNLESLYKFTNRVEIKKEEVKKEIVEDKK*
Ga0180732_10441252	3300020171	Groundwater	MEELLKEILQEIKDIHSHLNDLDSLYKFVNRVEMKKEEIKVEK
Ga0180732_10666882	3300020171	Groundwater	MEELLKEILGELKNIHYHLEQQLDFYRFVNRVEMKKEEIKEDKK
Ga0180732_11006433	3300020171	Groundwater	MNEEILKEILQELKDMHSHLDNLETLYKFTNRVEIKK
Ga0180732_12112661	3300020171	Groundwater	MDNNLLKEILEELRNIHNHLNNLETFYMFVNRVEMKKEEVKKEIIEDKK
Ga0212124_102347902	3300022553	Freshwater	MEKLLKEILQEIKDIHSHLNDLDSLYKFVNRVEMKKEEIKVEK
Ga0222679_10004343	3300022858	Saline Water	MNEKILKEILQELKEIHDHLNNIEVLYKFTNRVEMKKEEVPKDKKE
Ga0222685_10077931	3300022874	Saline Water	MNEKILKEILQELKGIHDHLNIIETLYKYVNRVEMKKEEVPKDKK
Ga0222700_10739112	3300023061	Saline Water	MSEKILNEILQELKGIHDHLNIIETLYKYVNRVEMKKEEVPKDKK
Ga0222703_10470202	3300023256	Saline Water	MEKLLKEILEELKNVHHHLENIETLYKFTNRVEIKKEVEKKEITEDKK
Ga0222684_10452692	3300023295	Saline Water	VLKEEGGKQMNEKILKEILEELKEIHDHLNTFEALYKFVNRVEMKKEEVPKGKKE
Ga0222684_10892142	3300023295	Saline Water	MEKILKEILQELKNIHCHLDNLETLYKFTNRVEMKKEEVPKDKK
Ga0210003_100291216	3300024262	Deep Subsurface	MNDELLKEILQELKNIHFHLDNLETLYKFTNRVEIKKEEIKEDKK
Ga0210003_10914012	3300024262	Deep Subsurface	MNEKILREILQELKNIHFHLGNLESLYKFTNRVEMKKEEIPKDKIKDKK
Ga0210043_11420642	3300025018	Aquifer	MNEEILKEILQELKNIHFHLDNLETLYKFTNKVEIRKENTTENKK
Ga0210056_11245713	3300025022	Groundwater	MNEKILAEILQELKNIHFHLDNLEVFYKFVNRVEMKKEETTENKK
Ga0210049_10821463	3300025036	Groundwater	MNEKILKEILQELKDIHFHLDNLEVFYKFVNRVEMKKEETTENKK
Ga0208905_10433022	3300025661	Lake Water	MNEKILKEILEELKEIHDHLNTFEALYKFVNRVEMKKEEVPKGKKE
Ga0208905_10835761	3300025661	Lake Water	LQEVKGIHDHLNNLETLYKFVNRVEMKKEEVKEEVPKDKKGFEKSK
Ga0208905_11734841	3300025661	Lake Water	MSEKILNEILQELKGIHDHLNIIETLYKYVNRVEMKKEEVPKNKKXRVLVIE
Ga0208905_12032602	3300025661	Lake Water	MNEKILKEILQELKGIHDHLNIIETLYKYVNRVEMKKEEVPKNKK
Ga0207997_10595523	3300025736	Saline Lake	MNEKILEEILQEIKNVHHHLENIETLYKFTNRVEIKKEVEKKEITEDKK
Ga0207997_10991362	3300025736	Saline Lake	MSEKILKEILQELKEIHDHLNNLEVLYKFTNRVEMKKEEVPKDKKE
Ga0210004_10587842	3300025811	Groundwater	MNEKILAEILQELKNIHFHLDNLEVFYKFVNRVEMKKKEITEEKIRK
Ga0210051_12030562	3300025868	Groundwater	MNEEILKEILQELKNIHFHLDNLEVFYKFVNRVEMKKEETTEDKK
Ga0307928_101597492	3300031227	Saline Water	MNEKILKEILQELKEIHSHLNNLETLYKFTNRVEMKKEEVPKDKK
Ga0307928_102810941	3300031227	Saline Water	MEKILKEILQEVKGIHDHLNNLETLYKFVNRVEMKKEEVPKDKKGFEKSK
Ga0307928_103145642	3300031227	Saline Water	MEKILKEILQELKGIHDHLNIIETLYKYVNRVEIKKEEVPKNKK
Ga0307928_103240531	3300031227	Saline Water	MEKLLKEILEELKNVHHHLENIETLYKFTNRVEMKKEEVPKDKK
Ga0307928_103866372	3300031227	Saline Water	MNEKILKEILQELKEIHDHLNTFEALYKFVNRVEMKKEEVPKDKKE
Ga0307427_10742102	3300031351	Salt Marsh	MEKILKEILEELKNIHFHLDNLETLYKFTNRVEMKKEEIIEDKE
Ga0307434_10214193	3300031379	Salt Marsh	MGKILKEILEELKNIHFHLDNLETLYKFTNRVEMKKEEIIEDKE
Ga0307434_10347181	3300031379	Salt Marsh	ELKDIHYHLDNLETFYRFVNRVEMKKEEIIKDKKGN
Ga0307434_10926452	3300031379	Salt Marsh	MNEKILKEILQELKDLHYHLDRLDTLYMFVNRVEIKKEEIIEDKK
Ga0307380_1001353510	3300031539	Soil	MNEKILKEILQELKNIHHHLDRLDAFYMMVNKIEMKKEEITEDKK
Ga0307380_102008293	3300031539	Soil	MNEKILKEILQELKNIHYHLEQQLDFYMFVNRVEMKKEDKEVTKEVKK
Ga0307380_106779431	3300031539	Soil	MEKLLKEILEELKNIHFHLDNLETLYKFTNRVEMKKEITEDKK
Ga0307380_109966851	3300031539	Soil	MNDKLLKEILQELKDIHFHLDNLEVLYKFTNRVEIKKEIPEDKKXRDYLVLI
Ga0307380_110912622	3300031539	Soil	MNEKILREILEELKNIHYHLDNLETFYMFVNRVEMKKGEITEDKK
Ga0307379_110337822	3300031565	Soil	MNEKILREILQEFKDIHSHLNNLETFYMFVNRVEMKKEEITEDKK
Ga0307379_114412762	3300031565	Soil	MNEKILKEILEELKNIHSHLDNFEVFYKFVNRVEMKGEMKKEEIIEDKK
Ga0307378_105498952	3300031566	Soil	MNEKILKEILEELKNIHSHLDNFEVFYKFVNRVEMKKDEIKKENIKDKK
Ga0307378_106002511	3300031566	Soil	MNEKILKEILQELKDIHFHLDNLEVLYKFTNRVEIKKEIPEDKK
Ga0307378_111855652	3300031566	Soil	MNDKLLKEILQELKDIHFHLENLEVLYKFTNRVEIKKEIPED
Ga0307376_100112406	3300031578	Soil	MNDKILKEILQELKDIHSHLDNLETFYKFVNRVEMKKEITEDKK
Ga0307376_103192602	3300031578	Soil	MNDKLLKEILEELKNIHFHLDNLETLYKFTNRVEMKKEITEDKK
Ga0307376_105687311	3300031578	Soil	EILEELKNIHSHLDNFEVFYKFVNRVEMKKDEITEDKK
Ga0307375_106973651	3300031669	Soil	ILKEILEELKNIHFHLDNLETLYKFTNRVEMKKEITEDKK
Ga0307377_103081463	3300031673	Soil	MNDKLLKEILQELKDIHFHLDNLEVLYKFTNRVEIKKEIPEDKK
Ga0307377_105836992	3300031673	Soil	MNEKILKEILQELKNIHFHLDRLDAFYIMVNKIEMRKEKIVEDEKGD
Ga0307377_107825001	3300031673	Soil	MEKILKEILQELKDIHYHLDNFEVFYKFVNRVEMKKEDKEVTKEVKK
Ga0307377_109492182	3300031673	Soil	MNEKILKEILQELKNIHYHLEQQLDFYMFVNRVEMKKEDKEVTKEVKKXRDYL
Ga0315293_1000033069	3300031746	Sediment	MKEEILKEILQELKNMHFHLDNLETFYRFVNRVDIKEKEITEDKK
Ga0315288_100221133	3300031772	Sediment	MNEEVLKEILQELKDMHSHLDNLETFYRFVNRVEMKEKEITEDKK
Ga0315288_100448026	3300031772	Sediment	MNEEILKEILQELKNLHSHLENIEVFYKFVNRVEMKGKEITEDKK
Ga0315288_104173863	3300031772	Sediment	MKEEILKEILQELKNLHFHLDNLEILYKFTNRVEMKGKEITVDKK
Ga0315288_109249472	3300031772	Sediment	MKEEILKNILQELKNMHSHLENIEVFYKFVNRVEMKKEEITVDKK
Ga0315285_102231402	3300031885	Sediment	MKEEILKEILQELKDMHSHLDNLETFYRFVNRVEMKEKEITEDKK
Ga0315285_103225182	3300031885	Sediment	MNEEILKEILQELKNLHFHLENLETFYRFVNRVEMKAREITADKK
Ga0315285_104191102	3300031885	Sediment	MKEEILKEILQELKNIHSHLENIEVFYKFVNRVEMKKEEITIDKK
Ga0315294_104656503	3300031952	Sediment	MKEEILKEILQEIKNMHSHLDNLEIFYRFVNRVEMKGKEITEDKK
Ga0315274_1000979814	3300031999	Sediment	MKEEILKEILQELKNLHFHLDNLETFYRFVNRVEIKEKEITADKK
Ga0315274_104931873	3300031999	Sediment	MKEEILKEILQELKNIHSHLENIEVFYKFVNRVEMKKEEITVDKK
Ga0315274_108334032	3300031999	Sediment	MNEEILKEILQELKNIHFHLENLETFYRFVNRVEMKGKEITEDKK
Ga0315296_100104984	3300032020	Sediment	MKEEILKEILQELKNLHSHLENIEVFYKFINRVEMKKEEVTADKK
Ga0315296_102166712	3300032020	Sediment	MNEEILKEILQEIKNLHFHLENMETFYRFVNRVEMKGKEITKDKK
Ga0315296_102689723	3300032020	Sediment	MKEEILKEILQEIKDMHSHLDNLETFYRFVNRVEMKEKEITEDKK
Ga0315296_105111132	3300032020	Sediment	MNEEILKEILQELKNMHSHLDNLETFYRFVNRVEMKEKEITADKK
Ga0315296_105448991	3300032020	Sediment	MNEEILKEILQELKDMHSHLDNLETFYRFVNRVEMKAREITADKK
Ga0315289_101261364	3300032046	Sediment	MNEEILKEILQELKDMHSHLDNLETFYRFVNRVEMKKKEEDKK
Ga0315289_104125623	3300032046	Sediment	MKEEILKEILQELKNIHFHLENMETLYKFTNRVEMKGEEITADKK
Ga0315295_113473222	3300032156	Sediment	MKEEILKEILQELKNIHFHLENLETFYRFVNRVEMKGKEITEDKK
Ga0315295_117658501	3300032156	Sediment	MNEEILKEILQELKNLHSHLENIEVFYKFVNRVEMKG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088254

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences