Metagenome Family F088154

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088154
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	66 residues
Representative Sequence	MNSWVLYGTIWFIVWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPVKQRPEPPETLP
Number of Associated Samples	92
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.91 %
% of genes near scaffold ends (potentially truncated)	20.18 %
% of genes from short scaffolds (< 2000 bps)	81.65 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.073 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (16.514 % of family members)
Environment Ontology (ENVO)	Unclassified (30.275 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (38.532 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.47% β-sheet: 0.00% Coil/Unstructured: 50.53%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13380	CoA_binding_2	34.86
PF01593	Amino_oxidase	13.76
PF00762	Ferrochelatase	2.75
PF01510	Amidase_2	2.75
PF13396	PLDc_N	1.83
PF04055	Radical_SAM	1.83
PF13534	Fer4_17	0.92
PF03364	Polyketide_cyc	0.92
PF00920	ILVD_EDD	0.92
PF01208	URO-D	0.92
PF03063	Prismane	0.92
PF07676	PD40	0.92
PF13365	Trypsin_2	0.92
PF03734	YkuD	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0276	Protoheme ferro-lyase (ferrochelatase)	Coenzyme transport and metabolism [H]	2.75
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	1.83
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	0.92
COG1151	Hydroxylamine reductase (hybrid-cluster protein)	Energy production and conversion [C]	0.92
COG1152	CO dehydrogenase/acetyl-CoA synthase alpha subunit	Energy production and conversion [C]	0.92
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.92
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.07 %
Unclassified	root	N/A	11.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.07 %
Unclassified	root	N/A	11.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.07 %
Unclassified	root	N/A	11.93 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	50.46 %
Unclassified	root	N/A	11.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	49.54 %
Unclassified	root	N/A	11.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	40.37 %
Unclassified	root	N/A	11.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.59 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	40.37 %
Unclassified	root	N/A	11.93 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.59 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	40.37 %
Unclassified	root	N/A	11.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.59 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090009\|LWAnN_GIDYKCY01C9403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	500	Open in IMG/M
3300001213\|JGIcombinedJ13530_102258312	Not Available	539	Open in IMG/M
3300001213\|JGIcombinedJ13530_104241976	Not Available	535	Open in IMG/M
3300002569\|JGI24136J36422_10164417	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300003858\|Ga0031656_10092469	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300003995\|Ga0055438_10053167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1051	Open in IMG/M
3300004072\|Ga0055512_10008895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1259	Open in IMG/M
3300004146\|Ga0055495_10053587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	850	Open in IMG/M
3300004282\|Ga0066599_100278355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	971	Open in IMG/M
3300004481\|Ga0069718_16085346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1955	Open in IMG/M
3300004481\|Ga0069718_16164256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	652	Open in IMG/M
3300004481\|Ga0069718_16211801	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300004778\|Ga0062383_10228272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	870	Open in IMG/M
3300005144\|Ga0068711_1003073	All Organisms → cellular organisms → Bacteria	7852	Open in IMG/M
3300005487\|Ga0074211_118273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	865	Open in IMG/M
3300005833\|Ga0074472_11407387	Not Available	580	Open in IMG/M
3300006102\|Ga0075015_100121910	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300009078\|Ga0105106_10138877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1787	Open in IMG/M
3300009087\|Ga0105107_10172500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1519	Open in IMG/M
3300009091\|Ga0102851_12977294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	544	Open in IMG/M
3300009146\|Ga0105091_10271417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	822	Open in IMG/M
3300009153\|Ga0105094_10954415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	508	Open in IMG/M
3300009167\|Ga0113563_12257614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	654	Open in IMG/M
3300009502\|Ga0114951_10132330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1387	Open in IMG/M
3300009868\|Ga0130016_10011031	All Organisms → cellular organisms → Bacteria	14509	Open in IMG/M
(restricted) 3300013123\|Ga0172368_10039760	All Organisms → cellular organisms → Bacteria	3330	Open in IMG/M
(restricted) 3300013123\|Ga0172368_10384326	Not Available	637	Open in IMG/M
(restricted) 3300013125\|Ga0172369_10337248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	781	Open in IMG/M
(restricted) 3300013137\|Ga0172375_10380316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	985	Open in IMG/M
(restricted) 3300013137\|Ga0172375_10427595	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
(restricted) 3300013137\|Ga0172375_10507242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	802	Open in IMG/M
(restricted) 3300013138\|Ga0172371_10211743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1623	Open in IMG/M
3300014255\|Ga0075320_1086030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	607	Open in IMG/M
3300014256\|Ga0075318_1056222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	689	Open in IMG/M
3300014309\|Ga0075317_1042752	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300014316\|Ga0075339_1237660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300014502\|Ga0182021_11560494	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300018060\|Ga0187765_10191327	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300019785\|Ga0182022_1093939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	934	Open in IMG/M
3300020163\|Ga0194039_1225642	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300021072\|Ga0194057_10177908	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300021349\|Ga0194052_1201520	Not Available	660	Open in IMG/M
3300021473\|Ga0194043_1176596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	723	Open in IMG/M
3300021520\|Ga0194053_10173644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	868	Open in IMG/M
3300021520\|Ga0194053_10418933	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300025461\|Ga0208851_1006046	All Organisms → cellular organisms → Bacteria	2817	Open in IMG/M
3300025716\|Ga0209746_1172898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	593	Open in IMG/M
3300025857\|Ga0209014_10078447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1344	Open in IMG/M
3300025857\|Ga0209014_10166511	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300025950\|Ga0210134_1024077	Not Available	847	Open in IMG/M
3300026038\|Ga0208536_1000295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	2379	Open in IMG/M
3300027051\|Ga0209269_1000405	All Organisms → cellular organisms → Bacteria	41490	Open in IMG/M
3300027818\|Ga0209706_10452922	Not Available	591	Open in IMG/M
3300027841\|Ga0209262_10467661	Not Available	614	Open in IMG/M
3300027843\|Ga0209798_10285588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	794	Open in IMG/M
3300027885\|Ga0209450_10100811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1914	Open in IMG/M
3300027897\|Ga0209254_10026612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	5220	Open in IMG/M
3300027897\|Ga0209254_10034918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4476	Open in IMG/M
3300027897\|Ga0209254_10294946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1244	Open in IMG/M
3300027899\|Ga0209668_10806365	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300027900\|Ga0209253_10057458	All Organisms → cellular organisms → Bacteria	3220	Open in IMG/M
3300027902\|Ga0209048_10000214	All Organisms → cellular organisms → Bacteria	62537	Open in IMG/M
3300028176\|Ga0268284_1023857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1804	Open in IMG/M
3300028679\|Ga0302169_10062936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	871	Open in IMG/M
3300028736\|Ga0302214_1080577	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300028743\|Ga0302262_10034221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1761	Open in IMG/M
3300030003\|Ga0302172_10180088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	663	Open in IMG/M
3300030003\|Ga0302172_10221790	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300030010\|Ga0302299_10276389	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300030019\|Ga0311348_10997326	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300030294\|Ga0311349_10857489	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300030838\|Ga0311335_10095532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1909	Open in IMG/M
3300030943\|Ga0311366_10271301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1469	Open in IMG/M
3300031232\|Ga0302323_100173005	All Organisms → cellular organisms → Bacteria	2162	Open in IMG/M
3300031539\|Ga0307380_10057401	All Organisms → cellular organisms → Bacteria	4233	Open in IMG/M
3300031539\|Ga0307380_11388428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	530	Open in IMG/M
3300031565\|Ga0307379_10218067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1938	Open in IMG/M
3300031669\|Ga0307375_10055219	All Organisms → cellular organisms → Bacteria	3022	Open in IMG/M
3300031722\|Ga0311351_10027313	All Organisms → cellular organisms → Bacteria	4572	Open in IMG/M
3300031727\|Ga0316576_10176612	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300031746\|Ga0315293_10001759	All Organisms → cellular organisms → Bacteria	21028	Open in IMG/M
3300031834\|Ga0315290_10239731	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300031873\|Ga0315297_11415486	Not Available	564	Open in IMG/M
3300031902\|Ga0302322_103487551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	538	Open in IMG/M
3300031918\|Ga0311367_11036421	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300031997\|Ga0315278_10310580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1629	Open in IMG/M
3300031997\|Ga0315278_11138028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	769	Open in IMG/M
3300032018\|Ga0315272_10154363	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300032053\|Ga0315284_11594261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	686	Open in IMG/M
3300032143\|Ga0315292_10761105	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300032143\|Ga0315292_11593807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	526	Open in IMG/M
3300032164\|Ga0315283_11760793	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300032164\|Ga0315283_12321446	Not Available	524	Open in IMG/M
3300032173\|Ga0315268_10829740	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300032173\|Ga0315268_10975166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	853	Open in IMG/M
3300032173\|Ga0315268_12750773	Not Available	505	Open in IMG/M
3300032177\|Ga0315276_10195649	All Organisms → cellular organisms → Bacteria	2119	Open in IMG/M
3300032256\|Ga0315271_10005309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8276	Open in IMG/M
3300032401\|Ga0315275_10833704	All Organisms → cellular organisms → Bacteria → Proteobacteria	1020	Open in IMG/M
3300032516\|Ga0315273_11019615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1058	Open in IMG/M
3300032782\|Ga0335082_10205713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1867	Open in IMG/M
3300032829\|Ga0335070_10564356	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300032893\|Ga0335069_11337966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	778	Open in IMG/M
3300032897\|Ga0335071_10063839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	3619	Open in IMG/M
3300033004\|Ga0335084_10115163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	2795	Open in IMG/M
3300033521\|Ga0316616_104062256	Not Available	551	Open in IMG/M
3300034123\|Ga0370479_0126217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	692	Open in IMG/M
3300034128\|Ga0370490_0128182	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300034414\|Ga0373905_075311	Not Available	546	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.41%
Engineered	Engineered	3.67%
Host-Associated	Host-Associated	0.92%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	59.63%
Terrestrial	Environmental → Terrestrial	35.78%
Lab Enrichment	Engineered → Lab Enrichment	1.83%
Plants	Host-Associated → Plants	0.92%
Wastewater	Engineered → Wastewater	0.92%
Bioremediation	Engineered → Bioremediation	0.92%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	51.38%
Soil	Environmental → Terrestrial → Soil	22.94%
Peat	Environmental → Terrestrial → Peat	12.84%
Marine	Environmental → Aquatic → Marine	5.50%
Sediment	Environmental → Aquatic → Sediment	1.83%
Defined Media	Engineered → Lab Enrichment → Defined Media	1.83%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.92%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.92%
Metal	Engineered → Bioremediation → Metal	0.92%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	29.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.84%
Lentic	Environmental → Aquatic → Freshwater → Lentic	9.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.34%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.67%
Clay	Environmental → Terrestrial → Soil → Clay	3.67%
Pond	Environmental → Aquatic → Freshwater → Pond	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.83%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	1.83%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.92%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.92%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	16.51%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	12.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.84%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	9.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.34%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.59%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.67%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.67%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	1.83%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.83%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.92%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.92%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	16.51%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	12.84%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	7.34%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.42%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	5.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.59%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.59%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	4.59%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.67%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	2.75%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.83%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.83%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	1.83%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.83%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.83%
Enrichment Culture	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture	1.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Sediment	0.92%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.92%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.92%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.92%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.92%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.92%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090009	Freshwater sediment microbial communities from Lake Washington, Seattle, for methane and nitrogen Cycles - SIP 13C-methane anaerobic+nitrate	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002569	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004072	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D2	Environmental	Open in IMG/M
3300004146	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D2	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005144	Enrichment culture microbial communities from Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKM (Arthur Kill Methanogenic) MetaG	Engineered	Open in IMG/M
3300005487	Sediment microbial communities from Lake Washington, Seattle, Washington, USA - Methanol enrichment	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300013123 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11m	Environmental	Open in IMG/M
3300013125 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11.25m	Environmental	Open in IMG/M
3300013137 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1m	Environmental	Open in IMG/M
3300013138 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_12m	Environmental	Open in IMG/M
3300014255	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2	Environmental	Open in IMG/M
3300014256	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleB_D2	Environmental	Open in IMG/M
3300014309	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleB_D1	Environmental	Open in IMG/M
3300014316	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D1	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020163	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-8m	Environmental	Open in IMG/M
3300021072	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-15m	Environmental	Open in IMG/M
3300021349	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-6m	Environmental	Open in IMG/M
3300021473	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-15m	Environmental	Open in IMG/M
3300021520	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-8m	Environmental	Open in IMG/M
3300025461	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025716	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211 (SPAdes)	Environmental	Open in IMG/M
3300025857	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)	Environmental	Open in IMG/M
3300025950	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026038	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D1 (SPAdes)	Environmental	Open in IMG/M
3300027051	Enrichment culture microbial communities from Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKM (Arthur Kill Methanogenic) MetaG (SPAdes)	Engineered	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028176	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2013_06_06_40m	Environmental	Open in IMG/M
3300028679	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_3	Environmental	Open in IMG/M
3300028736	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_3	Environmental	Open in IMG/M
3300028743	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_4	Environmental	Open in IMG/M
3300030003	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_3	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031669	Soil microbial communities from Risofladan, Vaasa, Finland - TR-1	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031727	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5	Host-Associated	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300034123	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_15	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034414	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A4.3	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
LWAnN_02556980	2088090009	Freshwater Sediment	VWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIVLIIVALLPARHRPEPPEMLP
JGIcombinedJ13530_1022583121	3300001213	Wetland	MNGWVLYATIWFIVWVVCLFFVWRMVDRKDLNRALWIILAIFFPVIILIVVAVLPARQRAEPPEMMQ*
JGIcombinedJ13530_1042419761	3300001213	Wetland	MNSWVLYGTIWFIVWVVCLWLVWRMVDRKDLNRALWIILCIFFPVVILIIVALLPHKHRAEPP
JGI24136J36422_101644172	3300002569	Arctic Peat Soil	MSPYVLYATIWFIVWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPARQRQTPPEMLP*
Ga0031656_100924693	3300003858	Freshwater Lake Sediment	MSSYVLYATVWFIVWVICLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPPKQRPTPPEMLP*
Ga0055438_100531671	3300003995	Natural And Restored Wetlands	MSWVVYATAWFVIWVICLWLVWRMVDRKDLNRALWIILCIFFPGIILIVVAMLPPKQRTTPPETMP*
Ga0055512_100088953	3300004072	Natural And Restored Wetlands	MSWVVYGTIWFIIWVVCLWLVWRMVSRKDLNRAGWIILTIFLPIIGLIIVAILPPKHRPTPPETLP*
Ga0055495_100535872	3300004146	Natural And Restored Wetlands	MTTTQVIAVTVGVVVWLVCLWLVWRMVDRKDLNRALWIVLCIFFPVIILIVVALLPAKQRPEPPEFIS*
Ga0066599_1002783551	3300004282	Freshwater	MNSWVLYGTIWFIVWVVCLWLVWRMVDRKDLNRALWILLCIFFPVIILIIVALLPHKQRAEPPEMLP*
Ga0069718_160853461	3300004481	Sediment	MNSWVLYGTIWFIVWVVCLWLVWRMVDRKDLNRALWILLCIFFPVIILIIVALLPPKRRPEPPEMLP*
Ga0069718_161642562	3300004481	Sediment	METWILIPTIWFVVWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPVKQRPEPPEMLP*
Ga0069718_162118012	3300004481	Sediment	MTTTQVVAVTIGVVVWLVCLWLVWRMVDRKDLNRALWIILCIFFPVITLIVVALLPAKRRPEPPEFIS*
Ga0062383_102282721	3300004778	Wetland Sediment	MNSWVLYGTIWFIVWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPVKQRPEPPETLP*
Ga0068711_10030733	3300005144	Enrichment Culture	MEWWVYGTVWFIIWVVCLWLVWRMVDRKDLNRAGWIILTIFFPIIGLIVVALLPHRQRPEPPEVMP*
Ga0074211_1182731	3300005487	Sediment	MQSWVLYGTIWFIVWVVSLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPHKQRQEPPEMLP*
Ga0074472_114073871	3300005833	Sediment (Intertidal)	MDSWVLAGTIWFIVWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIIVALLPHRQRAEPPETLT*
Ga0075015_1001219103	3300006102	Watersheds	MSWAVGATIWFVIWVICLWLVWRMVDRKDLNRALWIILCIFFPVFILIIVAILPPKQRATPPETMP*
Ga0105106_101388772	3300009078	Freshwater Sediment	MTTTQVVAVTIGVVVWLVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPAKRRPEPPEFIS*
Ga0105107_101725001	3300009087	Freshwater Sediment	MTTAQTIAVTIGVVVWLVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPAKRRPEPPEFIS*
Ga0102851_129772942	3300009091	Freshwater Wetlands	MSGWVLYATIWFVVWVVCLWLVWRMVDRKDLNRALWIILCIFFPVVILVVVATLPPKRREEPPEMLP*
Ga0105091_102714172	3300009146	Freshwater Sediment	MDSWVLIATVWFVVWVISLWLVWRMVDRKDLNRALWIILTVFFPVLMVIVVALLPPKQRVDPPEMLS*
Ga0105094_109544152	3300009153	Freshwater Sediment	MTTLEVVAVTIGVVVWLVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPAKRRPEPPEFIS*
Ga0113563_122576142	3300009167	Freshwater Wetlands	IWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPAKQRPEPPEMLP*
Ga0114951_101323302	3300009502	Freshwater	MNGWVLYATIWFIVWVVCLFFVWRMVDRKDLNRALWIILAIFFPVIILIVVALLPARRRAEPPEML
Ga0130016_100110311	3300009868	Wastewater	VDYVLVATIWFIVWVICLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPPKQRSAPPETLP*
(restricted) Ga0172368_100397602	3300013123	Freshwater	METWILVPTIWFIVWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIIVALLPPKQRPEPPEMLE*
(restricted) Ga0172368_103843262	3300013123	Freshwater	MEEARMSWWVYGTVWFIIWVVCLWLVWRMGDRKDLNRAGWIILTLFFPISGLIIVALLPPKRRSEPPEVMR*
(restricted) Ga0172369_103372482	3300013125	Freshwater	MEEARMSWWVYGTVWFIIWVVCLWLVWRMVDRKDLNRAGWIILTIFFPIIGLIVVAILPAKRRQTPPETLP*
(restricted) Ga0172375_103803162	3300013137	Freshwater	METWILVPTIWFIVWVVSLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPVKQRPEPPEMLP*
(restricted) Ga0172375_104275952	3300013137	Freshwater	MEEARMSWWVYGTVWFIIWVVCLWLVWRMVDRKDLNRAGWIILTIFFPIIGLIIVALLPPKRR
(restricted) Ga0172375_105072422	3300013137	Freshwater	MEEGHMSWWVYGTVWFIIWVVCLWLVWRMVDRKDLNRAGWIILTIFFPIIGLIVVAILPAKRRQTPPETLP*
(restricted) Ga0172371_102117432	3300013138	Freshwater	MEEARMSWWVYGTVWFIIWVVCLWLVWRMVDRKDLNRAGWIILTIFFPIIGLIIVALLPPKRRSEPPEVMR*
Ga0075320_10860301	3300014255	Natural And Restored Wetlands	MSWWVYGTVWFIIWVVCLWLVWRMVDRKDLNRAGWIILTIFFPIIGLIVVAILPARRRPAPPETLP*
Ga0075318_10562222	3300014256	Natural And Restored Wetlands	WVYGTIWFIVWVVCLWLVWRMVDRKDLNRAGWIILTIFFPIIGLIVVAILPARRRPAPPETLP*
Ga0075317_10427521	3300014309	Natural And Restored Wetlands	MEEGHMSWWVYGTVWFIIWVVCLWLVWRMVDRKDLNRAGWIILTIFFPIIGLIVVAVLPPKRRPEPPEIMP*
Ga0075339_12376602	3300014316	Natural And Restored Wetlands	MSWVVYATVWFVVWVICLWLVWRMVDRKDLNRALWIILCIFFPVVILIIVALLPAKQRPEPPQIMS*
Ga0182021_115604941	3300014502	Fen	MSSWALYGTIWFIVWIVCLWLVWRMVDRKDLNRGLWIILCIFFPVIILVVVALLPPKQR
Ga0187765_101913271	3300018060	Tropical Peatland	MNWWVYGTVWFIIWVVCLWLVWRMVGRKDLNRAGWIILTIFLPVIGLIIVAILPPKRRPTPPETML
Ga0182022_10939392	3300019785	Fen	MHTWVWYGTIWFIVWVVSLWLVWRMVDRKDLNRALWIILCIFFPVIILIIVALLPHSHRPDPPEMMS
Ga0194039_12256421	3300020163	Anoxic Zone Freshwater	MNGWVLYATIWFIVWVVCLFFVWRMVDRKDLNRALWIILAIFFPVLILIVVALLPARHRSEPPEMLQ
Ga0194057_101779082	3300021072	Anoxic Zone Freshwater	MNGWVLYATIWFIVWVVCLFFVWRMVDRKDLNRALWIILAIFFPVLILIVVALLPARHRPEPPEMLQ
Ga0194052_12015202	3300021349	Anoxic Zone Freshwater	MGWVLYATIWFIVWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPHKQRAEPPEMMR
Ga0194043_11765962	3300021473	Anoxic Zone Freshwater	MTGWVLYATIWFIVWVVCLFFVWRMVDRKDLNRALWIILAIFFPVLILIVVALLPARHRPEPPEMLQ
Ga0194053_101736442	3300021520	Anoxic Zone Freshwater	MNGWVLYATIWFIVWVVCLFFVWRMVDRKDLNRAVWIILAIFFPVIILIVVALLPVRRRAEPPEMLP
Ga0194053_104189332	3300021520	Anoxic Zone Freshwater	MTSWVLYATIWFIVWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPHKQRAEPPEMMQ
Ga0208851_10060464	3300025461	Arctic Peat Soil	MSWVVGATIWFVIWVICLWLVWRMVDRKDLNRALWIILCIFFPVLILIIVAILPPKQRATPPETMP
Ga0209746_11728981	3300025716	Arctic Peat Soil	MSPYVLYATIWFIVWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPARQRQTPPEMLP
Ga0209014_100784472	3300025857	Arctic Peat Soil	MQLWVPAGTIWFVQWVISLCLVWRMVDRKDLNRVLWIVLTLFFGFIILIIVALLPHSHHEDPPEMMS
Ga0209014_101665112	3300025857	Arctic Peat Soil	VSSVRTIWFIVWVISLWLVRRMVDRKDLNRALWIIVALLPHSHYEDPPEMMS
Ga0210134_10240772	3300025950	Natural And Restored Wetlands	MTTAQVVALTIGVVIWVLCLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPAKRRPEPPEFIS
Ga0208536_10002954	3300026038	Natural And Restored Wetlands	MSWWVYGTVWFIIWVVCLWLVWRMVDRKDLNRAGWIILTIFFPIIGLIVVAILPAKRRQTPPETLP
Ga0209269_100040526	3300027051	Enrichment Culture	MEWWVYGTVWFIIWVVCLWLVWRMVDRKDLNRAGWIILTIFFPIIGLIVVALLPHRQRPEPPEVMP
Ga0209706_104529221	3300027818	Freshwater Sediment	MTTAQTIAVTIGVVVWLVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPAKRRPEPPEFIS
Ga0209262_104676612	3300027841	Freshwater	MNSYVLYATVWFIMWLVCLWLVWRMVDRKDLNRALWIILCIFFPLIILIVVALLPAKQRPTPPEMLP
Ga0209798_102855882	3300027843	Wetland Sediment	MNSWVLYGTIWFIVWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPVKQRPEPPETLP
Ga0209450_101008112	3300027885	Freshwater Lake Sediment	MNSWVLYGTIWFIVWVVCLWLVWRMVDRKDLNRALWILLCIFFPVIILIIVALLPPKRRPEPPEMLP
Ga0209254_100266122	3300027897	Freshwater Lake Sediment	MNSWVLYGTIWFIVWVVCLWLVWRMVDRKDLNRALWIILCILFPVVILIIVALLPHKQRAEPPEMIP
Ga0209254_100349183	3300027897	Freshwater Lake Sediment	MSSYVLYATVWFIVWVICLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPPKQRPTPPEMLP
Ga0209254_102949461	3300027897	Freshwater Lake Sediment	MSWVAYGTIWFIIWVICLWLVWRMVDRKDLNRALWIILCIFFPVIILIIVAILPPKQRATPPETMP
Ga0209668_108063651	3300027899	Freshwater Lake Sediment	MDSWVLYATIWFVVWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALL
Ga0209253_100574582	3300027900	Freshwater Lake Sediment	MSGWVLYATIWFIVWVVCLFFVWRMVDRKDLNRALWIILAIFFPVIILIVVAVLPARHRAEPPEMMP
Ga0209048_1000021418	3300027902	Freshwater Lake Sediment	MSSLVLYGTIWFIVWIVSLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPAKQRPTPPEMLP
Ga0268284_10238572	3300028176	Saline Water	METWILVPTIWFIVWVACLWLVWRMVDRKDLNRALWIILCIFFPVIILIIVALLPVKQRPEPPEMLP
Ga0302169_100629361	3300028679	Fen	MSWVVGATIWFVIWVICLWLVWRMVDRKDLNRALWIILCIFFPILILIIVAILPARQRATPPETMP
Ga0302214_10805772	3300028736	Fen	MSWVVGATIWFVIWVICLWLVWRMVDRKDLNRALWIILCIFFPILILIIVAILPAKQRATPPETMS
Ga0302262_100342212	3300028743	Fen	MSWVVGATIWFVIWVICLWLVWRMVDRKDLNRALWIILCIFFPIVILIIVAILPAKQRATPP
Ga0302172_101800882	3300030003	Fen	WVVGATIWFVIWVICLWLVWRMVDRKDLNRALWIILCIFFPIVILIIVAILPARQRATPPETMP
Ga0302172_102217902	3300030003	Fen	MHTWVWYGTIWFIVWVVSLWLVWRMVDHKDLNRALWIILCIFFPVIILIIVALLPHSHRPDPPEMMS
Ga0302299_102763892	3300030010	Fen	MSWVVGATIWFVIWVICLWLVWRMVDRKDLNRALWIILCIFFPILILIIVAILPARQRATPPETM
Ga0311348_109973261	3300030019	Fen	MSWVVGATIWFVIWVICLWLVWRMVDRKDLNRALWIILCIFFPIVILIIVAILPA
Ga0311349_108574892	3300030294	Fen	MNTVVLAGTIWLVVWVVSLFLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPARQRPEPPETMG
Ga0311335_100955322	3300030838	Fen	MSWVVGATIWFVIWVICLWLVWRMVDRKDLNRALWIILCIFFPILILIIVAILPAKQ
Ga0311366_102713012	3300030943	Fen	MHTWVWYGTIWFIVWVVSLWLVWRMVDRKDLNRALWIILCIFFPVIILIIVALLPHSHR
Ga0302323_1001730053	3300031232	Fen	MNTVVLAGTIWFVVWVVSLFLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPARQRPEPPETMG
Ga0307380_100574014	3300031539	Soil	MNYVLAATIWFIVWVVCLWLVWRMVDRKDLNRALWIILCIFFPLIILIIVALLPPKQRPEPPETLS
Ga0307380_113884282	3300031539	Soil	GFMNYVLAATIWFIVWVVCLWLVWRMVDRKDLNRALWIVLCIFFPVIILIIVALLPPKQRPEPPETLS
Ga0307379_102180671	3300031565	Soil	MNYVLAATIWFIVWVVCLWLVWRMVDRKDLNRALWIVLCIFFPVIILIIVALLPPKQRPEPPETLS
Ga0307375_100552191	3300031669	Soil	MNYVLAATIWFIVWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIIVALLPPKQRPEPPETLS
Ga0311351_100273131	3300031722	Fen	MSWVVGATIWFVIWVICLWLVWRMVDRKDLNRALWIILCIFFPIVILIIVAILPAKQRATPPETMS
Ga0316576_101766122	3300031727	Rhizosphere	MNWWVYGTIWFIVWVVCLWLVWRMVDRKDLNRAGWIILTIFLPVIGLIIVAILPPKRRPEPPETLP
Ga0315293_1000175919	3300031746	Sediment	MQSWVLYGTIWFIVWVVSLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPAKQRKEPPEMLP
Ga0315290_102397312	3300031834	Sediment	MNSYVLYATVWFIMWIICLWLVWRMVDRKDLNRALWIILCIFFPLIILIVVALLPAKQRPTPPEMLP
Ga0315297_114154861	3300031873	Sediment	MNAWVLYGTIWFIVWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPPKQRREPPEMLP
Ga0302322_1034875511	3300031902	Fen	MSWVLYGTIWFVIWVICLWLVWRMVDRKDLNRALWIILCIFFPILILIIVAILPAKQRATPPETMP
Ga0311367_110364211	3300031918	Fen	MSWVVGATIWFVIWVICLWLVWRMVDRKDLNRALWIILCIFFPILILIIVAILPAKQRPAPPETMS
Ga0315278_103105803	3300031997	Sediment	MQSWVLYGTIWFIVWIISLWLVWRMVDRKDLNRALWIILCIFFPVIILIIVALLPHSHHEDPPEMMS
Ga0315278_111380282	3300031997	Sediment	MQSWVLYGTIWFIVWIVSLWLVWRMVDRKDLNRALWIILCIFFPVIILIIVALLPHSHHEDPPEMMS
Ga0315272_101543631	3300032018	Sediment	MSWVIYGTIWFVIWVICLWLVWRMVDRKDLNRALWIILCIFFPVIILIIVALLPHSHHEDPPEMMS
Ga0315284_115942612	3300032053	Sediment	TMQSWVLYGTIWFIVWVVSLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPAKQRKEPPEMLP
Ga0315292_107611052	3300032143	Sediment	MQSWVLYGTIWFIVWVVSLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPPKQRREPPEMLP
Ga0315292_115938071	3300032143	Sediment	MSSYVLYATIWFIVWVICLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPAKQRPTPPKMLP
Ga0315283_117607931	3300032164	Sediment	MQSWVLYGTIWFIVWVVSLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPHKQ
Ga0315283_123214461	3300032164	Sediment	MNAWVLYGTIWFIVWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIVLIIVALLPHKQRAEPPETLT
Ga0315268_108297402	3300032173	Sediment	MTGWVLYATIWFIVWVVCLFFVWRMVDRKDLNRALWIILAIFFPVIILIVVAVLPTRQRAEPPEIMQ
Ga0315268_109751661	3300032173	Sediment	MSWVVGATIWFVIWVICLWLVWRMVDRKDLNRALWIILCIFFPVLILIIVAILPAKQRATPPETMP
Ga0315268_127507732	3300032173	Sediment	MQSWVLYGTIWFIVWVISLWLVWRMVDRKDLNRALWIILCIFFPIIILIVVALLPARQRPTPPEMMP
Ga0315276_101956492	3300032177	Sediment	MQSWVLYGTIWFIVWVVSLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPHKQRQEPPEMLP
Ga0315271_100053094	3300032256	Sediment	MSWVIYGTIWFVIWVICLWLVWRMVDRKDLNRALWIILCIFFPVLILIIVAILPAKQRATPPETMP
Ga0315275_108337043	3300032401	Sediment	WVLYGTIWFIVWVVSLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPAKQRKEPPEMLP
Ga0315273_110196152	3300032516	Sediment	MNAWVLYGTIWFIVWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIIVALLPHSHHEDPPEMMS
Ga0335082_102057132	3300032782	Soil	MNWWVYGTIWFIIWVVCLWLVWRMVGRKDLNRAGWIILTIFLPVIGLIIVAILPPKQRPTPPETML
Ga0335070_105643562	3300032829	Soil	MNWWVYGTIWFIIWVVCLWLVWRMVGRKDLNRAGWVILTIFLPVIGLIIVAILPPKQRPTPPETM
Ga0335069_113379662	3300032893	Soil	MSWWVYGTVWFIIWVVCLWLVWRMVGRKDLNRAGWIILTIFFPIIGLIVVAILPARQRPTPPETLP
Ga0335071_100638393	3300032897	Soil	MNWWVYGTIWFIVWVVCLWLVWRMVDRKDLNRAGWIILTIFLPVIGLIVVALLPARQRPTPPETLP
Ga0335084_101151632	3300033004	Soil	MNWWVYGTIWFIIWVVCLWLVWRMVGRKDLNRAGWIILTIFFPVIGLIIVAILPPKQRPTPPETML
Ga0316616_1040622561	3300033521	Soil	MSWVVYATVWFVIWVVCLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPARLRPTPPETMP
Ga0370479_0126217_243_443	3300034123	Untreated Peat Soil	MSWVVYGTIWFVIWVVCLWLVWRMVDRKDLNRALWIILCIFFPILILIIVAILPPKQRATPPETMP
Ga0370490_0128182_310_510	3300034128	Untreated Peat Soil	MDWWVYGTIWFVIWVVCLWLVWRMVDRKDLNRAGWIILTIFFPIIGLIVVALLPHKQRPTPPETLP
Ga0373905_075311_218_421	3300034414	Sediment Slurry	MDSWVLYGTVWFIVWVICLWLVWRMVDRKDLNRALWIILCIFFPVIILIVVALLPPKQRPEPPEMIQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters