Metagenome / Metatranscriptome Family F087940

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087940
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	63 residues
Representative Sequence	MINKNKRQLEWAISFWIGIGLMSIINVWKIIQNQHAISYSWIMFGISIIFIIICAILIKIKK
Number of Associated Samples	88
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	48.18 %
% of genes near scaffold ends (potentially truncated)	24.55 %
% of genes from short scaffolds (< 2000 bps)	73.64 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (44.545 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (14.546 % of family members)
Environment Ontology (ENVO)	Unclassified (25.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.22% β-sheet: 0.00% Coil/Unstructured: 37.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF10988	DUF2807	2.73
PF13376	OmdA	2.73
PF12732	YtxH	1.82
PF07238	PilZ	1.82
PF14376	Haem_bd	1.82
PF15586	Imm8	1.82
PF05971	Methyltransf_10	1.82
PF00590	TP_methylase	0.91
PF13460	NAD_binding_10	0.91
PF01872	RibD_C	0.91
PF01191	RNA_pol_Rpb5_C	0.91
PF12681	Glyoxalase_2	0.91
PF01247	Ribosomal_L35Ae	0.91
PF07648	Kazal_2	0.91
PF02675	AdoMet_dc	0.91
PF01551	Peptidase_M23	0.91
PF13715	CarbopepD_reg_2	0.91
PF01061	ABC2_membrane	0.91
PF13173	AAA_14	0.91
PF01923	Cob_adeno_trans	0.91
PF00121	TIM	0.91
PF00857	Isochorismatase	0.91
PF00171	Aldedh	0.91
PF04402	SIMPL	0.91
PF00326	Peptidase_S9	0.91
PF02867	Ribonuc_red_lgC	0.91
PF02245	Pur_DNA_glyco	0.91
PF13419	HAD_2	0.91
PF14588	YjgF_endoribonc	0.91
PF01230	HIT	0.91
PF00270	DEAD	0.91
PF00072	Response_reg	0.91
PF16198	TruB_C_2	0.91
PF09845	DUF2072	0.91
PF17164	DUF5122	0.91
PF04993	TfoX_N	0.91
PF00149	Metallophos	0.91
PF13635	DUF4143	0.91
PF11104	PilM_2	0.91
PF00856	SET	0.91
PF00903	Glyoxalase	0.91
PF13549	ATP-grasp_5	0.91
PF13528	Glyco_trans_1_3	0.91
PF13302	Acetyltransf_3	0.91
PF13288	DXPR_C	0.91
PF00271	Helicase_C	0.91
PF08327	AHSA1	0.91
PF04264	YceI	0.91
PF01791	DeoC	0.91
PF00005	ABC_tran	0.91
PF00133	tRNA-synt_1	0.91
PF04203	Sortase	0.91
PF03446	NAD_binding_2	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG3129	23S rRNA A1618 N6-methylase RlmF	Translation, ribosomal structure and biogenesis [J]	1.82
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	1.82
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.91
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.91
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.91
COG3471	Predicted secreted (periplasmic) protein	Function unknown [S]	0.91
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	0.91
COG2968	Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain	Function unknown [S]	0.91
COG2859	Outer membrane channel-forming protein BP26/OMP28, SIMPL family	Cell wall/membrane/envelope biogenesis [M]	0.91
COG2451	Ribosomal protein L35AE/L33A	Translation, ribosomal structure and biogenesis [J]	0.91
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.91
COG2094	3-methyladenine DNA glycosylase Mpg	Replication, recombination and repair [L]	0.91
COG2012	DNA-directed RNA polymerase, subunit H, RpoH/RPB5	Transcription [K]	0.91
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.91
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	0.91
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.91
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.91
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.91
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.91
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.91
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.91
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.91
COG0149	Triosephosphate isomerase	Carbohydrate transport and metabolism [G]	0.91
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.91
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.45 %
Unclassified	root	N/A	44.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.45 %
Unclassified	root	N/A	44.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.55 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.27 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	18.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.55 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	14.55 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	5.45 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	5.45 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.91 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.91 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.55 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	13.64 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	5.45 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	1.82 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	1.82 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.91 %
unclassified DPANN group	no rank	All Organisms → cellular organisms → Archaea → DPANN group → unclassified DPANN group	0.91 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.91 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.55 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	13.64 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.82 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.82 %
DPANN group archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → unclassified DPANN group → DPANN group archaeon	0.91 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.91 %
Leptospirales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales	0.91 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.91 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.55 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	2.73 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	2.73 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	1.82 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.82 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.82 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.91 %
Leptospiraceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae	0.91 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.91 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.91 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.91 %
DPANN group archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → unclassified DPANN group → DPANN group archaeon	0.91 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.55 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	2.73 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	1.82 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1.82 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.82 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.82 %
Candidatus Taylorbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria	0.91 %
Bacteroidetes bacterium 43-93	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 43-93	0.91 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.91 %
Leptospira	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira	0.91 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.91 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.91 %
DPANN group archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → unclassified DPANN group → DPANN group archaeon	0.91 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.55 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2.73 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	1.82 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1.82 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.82 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.82 %
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_12_FULL_45_16	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria → Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_12_FULL_45_16	0.91 %
unclassified Leptospira	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira → unclassified Leptospira	0.91 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.91 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.91 %
Bacteroidetes bacterium 43-93	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 43-93	0.91 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.91 %
DPANN group archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → unclassified DPANN group → DPANN group archaeon	0.91 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.55 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2.73 %
Mucilaginibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter	1.82 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1.82 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.82 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.82 %
Spirosoma	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma	0.91 %
Muricauda	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Muricauda	0.91 %
Leptospira sp.	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira → unclassified Leptospira → Leptospira sp.	0.91 %
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_12_FULL_45_16	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria → Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_12_FULL_45_16	0.91 %
Bacteroidetes bacterium 43-93	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 43-93	0.91 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.91 %
DPANN group archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → unclassified DPANN group → DPANN group archaeon	0.91 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.55 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2.73 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1.82 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.82 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.82 %
Spirosoma rhododendri	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma → Spirosoma rhododendri	0.91 %
Muricauda pacifica	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Muricauda → Muricauda pacifica	0.91 %
Mucilaginibacter gotjawali	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter → Mucilaginibacter gotjawali	0.91 %
Leptospira sp.	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira → unclassified Leptospira → Leptospira sp.	0.91 %
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_12_FULL_45_16	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria → Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_12_FULL_45_16	0.91 %
Bacteroidetes bacterium 43-93	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 43-93	0.91 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.91 %
DPANN group archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → unclassified DPANN group → DPANN group archaeon	0.91 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001398\|JGI20207J14881_1005093	All Organisms → cellular organisms → Bacteria	4027	Open in IMG/M
3300002072\|JGIcombinedJ21914_10107135	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300003852\|Ga0031655_10166950	Not Available	849	Open in IMG/M
3300004210\|Ga0066639_10264761	Not Available	1065	Open in IMG/M
3300004776\|Ga0007800_10002136	All Organisms → cellular organisms → Archaea	6120	Open in IMG/M
3300005327\|Ga0070658_11526075	Not Available	579	Open in IMG/M
3300005578\|Ga0068854_100265117	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1377	Open in IMG/M
3300005650\|Ga0075038_11396505	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma → Spirosoma rhododendri	864	Open in IMG/M
3300006638\|Ga0075522_10174554	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300006638\|Ga0075522_10325329	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300006640\|Ga0075527_10093547	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300008002\|Ga0100390_10400146	All Organisms → cellular organisms → Archaea	640	Open in IMG/M
3300009502\|Ga0114951_10023765	All Organisms → cellular organisms → Archaea	4066	Open in IMG/M
3300009538\|Ga0129287_10250603	Not Available	772	Open in IMG/M
3300009538\|Ga0129287_10278246	Not Available	733	Open in IMG/M
3300009545\|Ga0105237_12567840	Not Available	520	Open in IMG/M
3300009621\|Ga0116116_1026998	Not Available	1963	Open in IMG/M
3300010341\|Ga0074045_10350185	Not Available	963	Open in IMG/M
3300013092\|Ga0163199_1357110	Not Available	546	Open in IMG/M
3300014161\|Ga0181529_10061813	Not Available	2555	Open in IMG/M
3300014162\|Ga0181538_10079870	Not Available	1963	Open in IMG/M
3300014491\|Ga0182014_10215077	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300014496\|Ga0182011_10090598	Not Available	2137	Open in IMG/M
3300014501\|Ga0182024_10150313	All Organisms → cellular organisms → Bacteria	3274	Open in IMG/M
3300014501\|Ga0182024_11987239	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira → unclassified Leptospira → Leptospira sp.	643	Open in IMG/M
3300014502\|Ga0182021_10666495	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300014838\|Ga0182030_10018191	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	13497	Open in IMG/M
3300014838\|Ga0182030_11587589	Not Available	536	Open in IMG/M
3300014839\|Ga0182027_10039620	All Organisms → cellular organisms → Bacteria	6018	Open in IMG/M
3300014839\|Ga0182027_10454351	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300014839\|Ga0182027_10573281	Not Available	1218	Open in IMG/M
3300017988\|Ga0181520_10020421	All Organisms → cellular organisms → Bacteria	7596	Open in IMG/M
3300018057\|Ga0187858_10006302	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	10665	Open in IMG/M
3300019788\|Ga0182028_1562048	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1201	Open in IMG/M
3300021404\|Ga0210389_10000132	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter	74661	Open in IMG/M
3300023068\|Ga0224554_1029511	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1587	Open in IMG/M
3300023088\|Ga0224555_1016394	All Organisms → cellular organisms → Bacteria	3903	Open in IMG/M
3300024995\|Ga0210018_1011118	All Organisms → cellular organisms → Archaea	3597	Open in IMG/M
3300025476\|Ga0208495_1017157	Not Available	1371	Open in IMG/M
3300025477\|Ga0208192_1103764	Not Available	509	Open in IMG/M
3300025627\|Ga0208220_1102647	Not Available	767	Open in IMG/M
3300025634\|Ga0208589_1131053	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300025679\|Ga0207933_1000284	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	52580	Open in IMG/M
3300025716\|Ga0209746_1059845	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300025837\|Ga0210016_1250499	All Organisms → cellular organisms → Archaea	658	Open in IMG/M
3300025854\|Ga0209176_10074588	Not Available	779	Open in IMG/M
3300025862\|Ga0209483_1123932	Not Available	1102	Open in IMG/M
3300025862\|Ga0209483_1238864	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300025981\|Ga0207640_10171559	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1617	Open in IMG/M
3300027896\|Ga0209777_10033978	Not Available	4811	Open in IMG/M
3300027896\|Ga0209777_10085402	All Organisms → cellular organisms → Archaea → DPANN group	2727	Open in IMG/M
3300027896\|Ga0209777_10172357	All Organisms → cellular organisms → Archaea	1764	Open in IMG/M
3300027896\|Ga0209777_10263951	Not Available	1348	Open in IMG/M
3300027896\|Ga0209777_10324380	All Organisms → cellular organisms → Archaea	1182	Open in IMG/M
3300027896\|Ga0209777_10608745	All Organisms → cellular organisms → Archaea	789	Open in IMG/M
3300027896\|Ga0209777_10784039	Not Available	670	Open in IMG/M
3300027902\|Ga0209048_10772264	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	628	Open in IMG/M
3300027902\|Ga0209048_10775203	Not Available	627	Open in IMG/M
3300028168\|Ga0268277_1011055	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3294	Open in IMG/M
3300028298\|Ga0268280_1004963	All Organisms → cellular organisms → Archaea	5977	Open in IMG/M
3300028299\|Ga0268276_1037329	All Organisms → cellular organisms → Archaea	1940	Open in IMG/M
3300028573\|Ga0265334_10003500	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	7120	Open in IMG/M
3300028654\|Ga0265322_10056647	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1112	Open in IMG/M
3300028666\|Ga0265336_10129015	Not Available	753	Open in IMG/M
3300028780\|Ga0302225_10448240	Not Available	604	Open in IMG/M
3300028800\|Ga0265338_10018823	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria → Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_12_FULL_45_16	7367	Open in IMG/M
3300028800\|Ga0265338_10165562	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1702	Open in IMG/M
3300028854\|Ga0302268_1018362	Not Available	1904	Open in IMG/M
3300028873\|Ga0302197_10030459	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	3333	Open in IMG/M
3300028873\|Ga0302197_10204321	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	921	Open in IMG/M
3300028874\|Ga0302155_10171232	Not Available	952	Open in IMG/M
3300029882\|Ga0311368_10101549	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2455	Open in IMG/M
3300029908\|Ga0311341_10002430	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter → Mucilaginibacter gotjawali	23500	Open in IMG/M
3300029908\|Ga0311341_10839861	Not Available	507	Open in IMG/M
3300029922\|Ga0311363_10272514	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1936	Open in IMG/M
3300029922\|Ga0311363_10281664	Not Available	1890	Open in IMG/M
3300029922\|Ga0311363_11154532	All Organisms → cellular organisms → Bacteria → FCB group	659	Open in IMG/M
3300029951\|Ga0311371_11640301	Not Available	706	Open in IMG/M
3300029954\|Ga0311331_10794790	Not Available	854	Open in IMG/M
3300029955\|Ga0311342_11136333	Not Available	567	Open in IMG/M
3300029955\|Ga0311342_11286846	Not Available	521	Open in IMG/M
3300029957\|Ga0265324_10355032	Not Available	500	Open in IMG/M
3300030041\|Ga0302274_10046948	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2577	Open in IMG/M
3300030043\|Ga0302306_10157850	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 43-93	875	Open in IMG/M
3300030049\|Ga0302191_10019237	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	3432	Open in IMG/M
3300030399\|Ga0311353_10669646	Not Available	899	Open in IMG/M
3300030503\|Ga0311370_11723609	Not Available	641	Open in IMG/M
3300030507\|Ga0302192_10261834	Not Available	729	Open in IMG/M
3300030688\|Ga0311345_10563205	Not Available	958	Open in IMG/M
3300031057\|Ga0170834_105809545	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Muricauda → Muricauda pacifica	701	Open in IMG/M
3300031128\|Ga0170823_13884230	Not Available	637	Open in IMG/M
3300031231\|Ga0170824_110090620	Not Available	627	Open in IMG/M
3300031235\|Ga0265330_10080624	Not Available	1402	Open in IMG/M
3300031240\|Ga0265320_10466801	All Organisms → cellular organisms → Archaea	557	Open in IMG/M
3300031258\|Ga0302318_10328007	Not Available	765	Open in IMG/M
3300031261\|Ga0302140_10089150	Not Available	3147	Open in IMG/M
3300031524\|Ga0302320_10764363	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300031552\|Ga0315542_1108769	Not Available	1046	Open in IMG/M
3300031670\|Ga0307374_10273814	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300031707\|Ga0315291_10569520	Not Available	1034	Open in IMG/M
3300031708\|Ga0310686_101585660	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300031708\|Ga0310686_104581354	Not Available	508	Open in IMG/M
3300031746\|Ga0315293_10286969	All Organisms → cellular organisms → Archaea → DPANN group → unclassified DPANN group → DPANN group archaeon	1324	Open in IMG/M
3300031772\|Ga0315288_11592158	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	533	Open in IMG/M
3300031952\|Ga0315294_11471429	Not Available	535	Open in IMG/M
3300032118\|Ga0315277_10000010	All Organisms → cellular organisms → Archaea	336031	Open in IMG/M
3300032163\|Ga0315281_10659041	Not Available	1095	Open in IMG/M
3300032401\|Ga0315275_10000012	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	154053	Open in IMG/M
3300032401\|Ga0315275_12427887	All Organisms → cellular organisms → Archaea	544	Open in IMG/M
3300033433\|Ga0326726_10075267	Not Available	2984	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.09%
Host-Associated	Host-Associated	10.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.55%
Aquatic	Environmental → Aquatic	34.55%
Plants	Host-Associated → Plants	10.91%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	29.09%
Soil	Environmental → Terrestrial → Soil	29.09%
Peat	Environmental → Terrestrial → Peat	25.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.09%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	2.73%
Unclassified	Environmental → Aquatic → Unclassified	1.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.82%
Marine	Environmental → Aquatic → Marine	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	25.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	16.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.82%
Lentic	Environmental → Aquatic → Freshwater → Lentic	10.91%
Lake	Environmental → Aquatic → Freshwater → Lake	9.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.45%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.64%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	2.73%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	1.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.82%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.91%
Clay	Environmental → Terrestrial → Soil → Clay	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	25.45%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	10.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.91%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.18%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	7.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.64%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.64%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	1.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.82%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	14.55%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	10.91%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	9.09%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	7.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	7.27%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	5.45%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.73%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	2.73%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.73%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.73%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.73%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.82%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.82%
Beach Aquifer Porewater	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.82%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.82%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.91%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.91%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.91%
Aquifer	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer	0.91%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.91%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.91%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001398	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012	Environmental	Open in IMG/M
3300002072	Barrow Graham LP Ref core NGADG0011-211 (Barrow Graham LP Ref core NGADG0011-211,NGADG0004-312, ASSEMBLY_DATE=20131005)	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004210	Groundwater microbial communities from aquifer - Crystal Geyser CG10_big_fil_rev_8/21/14_0.10	Environmental	Open in IMG/M
3300004776	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA14M	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300008002	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-14	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009538	Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - H-2W	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300013092	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150m	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300024995	Groundwater microbial communities from aquifer - Crystal Geyser CG09_land_8/20/14_0.10 (SPAdes)	Environmental	Open in IMG/M
3300025476	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA14M (SPAdes)	Environmental	Open in IMG/M
3300025477	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025679	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025716	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211 (SPAdes)	Environmental	Open in IMG/M
3300025837	Groundwater microbial communities from aquifer - Crystal Geyser CG02_land_8/20/14_3.00 (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028168	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2010_1_5_50m	Environmental	Open in IMG/M
3300028298	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_5_24_40m	Environmental	Open in IMG/M
3300028299	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2010_1_5_45m	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028654	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG	Host-Associated	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028854	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_1	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031552	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-20	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20207J14881_10050932	3300001398	Arctic Peat Soil	MIHQNRKYLERAVSFWIGIGLMSIINVWKISQSQHAISYSKIMFGVSIIFIITCLILLKIKK*
JGIcombinedJ21914_101071351	3300002072	Arctic Peat Soil	MVNQNKRYLEQAISFWIGVGLMSIINIYKIISNHNALLYSWIMFGISVIAIIICAILIKRKGGSTT*
Ga0031655_101669503	3300003852	Freshwater Lake Sediment	MKDKRFLEWGIAFWFGIGLMSIINVWKITQNQNAISYSWIMFWISIVFIIIAGLLLKFKKKV*
Ga0066639_102647612	3300004210	Groundwater	MINKNKRQLEWGISFWIGIGLMSIINVIKITYTQHTISYNWIMFGISIIAIIICV
Ga0007800_100021367	3300004776	Freshwater	MIKKNKRTLEWAISFWMGVGLMSVINIWKIVYTQSSLPYSWIMFGVSIIMIIISVFLIRRTKK*
Ga0070658_115260751	3300005327	Corn Rhizosphere	MIYQNKKYLELAMSFWTGIGLMSIINVWKISKNQHAITCAEIMFGVSIIFIIVCAILIKIRK*
Ga0068854_1002651173	3300005578	Corn Rhizosphere	MIYQNKKYLELAMSFWTGIGLMSIINVWKISKNQHAITCSEIMFGVSIIFIIVCAILIKIRK*
Ga0075038_113965053	3300005650	Permafrost Soil	MINKSKKQLELAISFWVGIGLMSIINVWKIMENQHAISYSWIMFGASIVFIIICVILIKIKQ*
Ga0075522_101745542	3300006638	Arctic Peat Soil	FNTFSYKIKDEKMIHQNRKYLERAVSFWIGIGLMSIINVWKISQSQHAISYSKIMFGVSIIFIITCLILLKIKK*
Ga0075522_103253292	3300006638	Arctic Peat Soil	MMHKSKRQLEWAIAFWVGVGLMSVINVVKVFYNQHAITYSWIMFGISIIAIIICAILIKVKK*
Ga0075527_100935473	3300006640	Arctic Peat Soil	MVNQKKRYLELGISFWIGVGLMSIINVWKIIQNNNALLYSWIMFGISVIAIIICAVLIKSKGGSTT*
Ga0100390_104001461	3300008002	Aquifer	RQLEWGISFWIGIGLMSIINVIKITYTQHTISYNWIMFGISIIAIIICVILIKIKK*
Ga0114951_100237652	3300009502	Freshwater	MITKSKRVYELAMSFWIGIGLMSIINVWKIDYNQNAMSYSWIMFGISIVFIIVCAILVKITKK*
Ga0129287_102506031	3300009538	Beach Aquifer Porewater	MVKQNKRRYLELALAFWLGIGLMSIINVWKILGNQNAVRYSWIMFGFSVIFIIIC
Ga0129287_102782461	3300009538	Beach Aquifer Porewater	SSYKMKGEKMTIINKSKRQLEWAISIWIGIGLMSIINVWKIIQNQNALSYSWIMFGISVIMIIICVILIKRKK*
Ga0105237_125678402	3300009545	Corn Rhizosphere	MIYQNKKYLELAMSFWTGIGLMSIINVWKISKNQHAITCAEIMFGVSIIFIIVCEI*
Ga0116116_10269984	3300009621	Peatland	MINKSKRQLEWAISFWIGIGLMSIINVWKITQNQHAISYSWIMFCVSIIFIIICLVLINIKGKK*
Ga0074045_103501852	3300010341	Bog Forest Soil	MINKTKRQFEWAIAFWIGVGLMSIINVWKIIESQHPLSYSWIMFGISIIFIIICLILIKAKK*
Ga0163199_13571102	3300013092	Freshwater	MKNQTKRYLEWAICFWIGIGLMSIIDIWKITQDQNALRYSWIMSGVSVIMLVICIILLIKRKKEKIDDK*
Ga0181529_100618132	3300014161	Bog	MMKNKRQLEWAVSFWIGIGLMSIINVWKINQNRHALVYSWIMFGVSVVFIIICLILIKIKK*
Ga0181538_100798703	3300014162	Bog	VIKKSYKNYKKIMNKNRRQFEWAISFWIGVGLMSIINVWKIITNQHAILYSWIMFSVSMIFIIICLIVIKTKG*
Ga0182014_102150772	3300014491	Bog	MKDVIKNETDLLKRTHQNKRYLELGMSFWMGIGLMSIINVWKITENQHAITYSWIMFGLSLIAVSICAILIKIRK*
Ga0182011_100905984	3300014496	Fen	MKSLTMKNMINKSKRTLEWAISFWIGIGLMSIINVWKIIQNQHALSYSWIMFGISIIWIIICVILIKIKK*
Ga0182024_101503132	3300014501	Permafrost	MINKNKRQLEWAISFWIGVGLMSIINVWKITQNQYAILYSWIMFCVSIILIIICFIRINMKGKKEI*
Ga0182024_119872392	3300014501	Permafrost	MINKSRRNFEWAICFWIGIGLMSIINVWKINENQHALSYSWIMFGVSMVFIVTCAIMIKIKK*
Ga0182021_106664952	3300014502	Fen	MKKTKENLEWAISFWIGIGLMSIINVWKIIQNQHALSYSWIMFGISIIAIIICVILIKIKK*
Ga0182030_100181919	3300014838	Bog	MKMINKTKRQLELATSFWIGIGLMSIINVWKVTENKHAITYSWIMFGIAVIAVMTCTILIKIKK*
Ga0182030_115875891	3300014838	Bog	REINMINKTKRQYELAASFWAGIGLMSIINVWKITENKHAITYSWIMFGLSVIFIIICAILLKIKK*
Ga0182027_100396208	3300014839	Fen	MNKTKRQFEWAISFWMGIGLMSLINVWKITQNQHAVSYSWIMFGISVVFIIICLVMINMKGNK*
Ga0182027_104543512	3300014839	Fen	MMNKTKRQFEWAISFWIGVALMCLINVWKITQGQNAVQYSWVEFGISIFFIIICLIVIGIKGKKQI*
Ga0182027_105732812	3300014839	Fen	MINKTKRQFEWALSFWIGVGLMCLINVWKIVQGRNALSYSWVEFGISIIFIIICLIVIGIKGKKEI*
Ga0181520_100204214	3300017988	Bog	MGAQGQKYRNEAKEKMMKNKRQLEWAVSFWIGIGLMSIINVWKINQNRHALVYSWIMFGVSVVFIIICLILIKIKK
Ga0187858_1000630213	3300018057	Peatland	LEWAISFWIGIGLMSIINVWKITQNQHAISYSWIMFCVSIIFIIICLVLINIKGKK
Ga0182028_15620484	3300019788	Fen	MNKTKRQFEWAISFWMGIGLMSLINVWKITQNQHAVSYSWIMFGISVVFIIICLVMINMKGNK
Ga0210389_1000013215	3300021404	Soil	LEWAIGFWIGIGLMSIINVWKIIHNQQAISYSWIMFCTSIVAIVICVILIKIKI
Ga0224554_10295113	3300023068	Soil	MYNSVMTKTKRQLELAISFWIGIGLMSVINVWKITQSQHAVVYSWIMFGVSVVAVAICVILVKIKK
Ga0224555_10163944	3300023088	Soil	MKDVIKNETDLLKRTHQNKRYLELGMSFWMGIGLMSIINVWKITENQHAITYSWIMFGLSLIAVSICAILIKIRK
Ga0210018_10111182	3300024995	Groundwater	MINKNKRQLEWGISFWIGIGLMSIINVIKITYTQHTISYNWIMFGISIIAIIICVILIKIKK
Ga0208495_10171572	3300025476	Freshwater	MIKKNKRTLEWAISFWMGVGLMSVINIWKIVYTQSSLPYSWIMFGVSIIMIIISVFLIRRTKK
Ga0208192_11037641	3300025477	Peatland	MINKSKRQLEWAISFWIGIGLMSIINVWKITQNQHAISYSWIMFCVSIIFIIICLVLINIKGKK
Ga0208220_11026472	3300025627	Arctic Peat Soil	MINKSKRQLELATSFWVGIGLMNIINIWKITENKHAITYSWIMFGISIIIIIICAILLKTKK
Ga0208589_11310531	3300025634	Arctic Peat Soil	MTKSKRQLEWALSFWIGIGLMSIINVWKVTQSQHAVSYSWIMFGVSIIFIIICFILISIKGKKQ
Ga0207933_10002842	3300025679	Arctic Peat Soil	MIHQNRKYLERAVSFWIGIGLMSIINVWKISQSQHAISYSKIMFGVSIIFIITCLILLKIKK
Ga0209746_10598453	3300025716	Arctic Peat Soil	MVNQNKRYLEQAISFWIGVGLMSIINIYKIISNHNALLYSWIMFGISVIAIIICAILIKRKGGSTT
Ga0210016_12504992	3300025837	Groundwater	GISFWIGIGLMSIINVIKITYTQHTISYNWIMFGISIIAIIICVILIKIKK
Ga0209176_100745882	3300025854	Arctic Peat Soil	MARLNKRNLELGISFWIGVGLMSIINVWKIIQNNNALLYSWIMFGISVIAIIICAVLIKSKGGSTT
Ga0209483_11239321	3300025862	Arctic Peat Soil	FNTFSYKIKDEKMIHQNRKYLERAVSFWIGIGLMSIINVWKISQSQHAISYSKIMFGVSIIFIITCLILLKIKK
Ga0209483_12388641	3300025862	Arctic Peat Soil	MMHKSKRQLEWAIAFWVGVGLMSVINVVKVFYNQHAITYSWIMFGISIIAIIICAILIKVKK
Ga0207640_101715592	3300025981	Corn Rhizosphere	MIYQNKKYLELAMSFWTGIGLMSIINVWKISKNQHAITCSEIMFGVSIIFIIVCAILIKIRK
Ga0209777_100339783	3300027896	Freshwater Lake Sediment	MINQNKRHLEWAISFWIGVGLMSIINVWKIIQNHNALSYPWIMFGISVIAIVICAILIKRKGGLNSP
Ga0209777_100854023	3300027896	Freshwater Lake Sediment	MKDKRFLEWGIAFWFGIGLMSIINVWKITQNQNAISYSWIMFWISIVFIIIAGLLLKFKKKV
Ga0209777_101723573	3300027896	Freshwater Lake Sediment	MINKNKRQLEWGISFWIGIGLMSIINVWKIIQNQHAITYSWIMFGISIIFIIICAILIKIKK
Ga0209777_102639513	3300027896	Freshwater Lake Sediment	MKKTKENLEWAISFWIGIGLMSIINVWKIIQNQHALSYSWIMFGISIIAIIICVILIKIK
Ga0209777_103243802	3300027896	Freshwater Lake Sediment	MINKNKRQLEWAISFWIGVGLMSIINVWKIIQNQHALSYSWIMFGISIIAIVICVILIKIKK
Ga0209777_106087453	3300027896	Freshwater Lake Sediment	MINKNKRQLEWAISFWIGIGLMSIINVWKIIQNQHAISYSWIMFGISIIFIIICAILIKIKK
Ga0209777_107840391	3300027896	Freshwater Lake Sediment	MKNQTKRYLEWAICFWIGVGLMSIIDIWKITQDQNALRYSWIMSGVSIIMLVICIILLIKRKKEKIDDK
Ga0209048_107722641	3300027902	Freshwater Lake Sediment	MINQNKRHLEWAISFWIGVGLMSIINVWKIIQNHNALSYPWIMFGISVIAIVICAI
Ga0209048_107752032	3300027902	Freshwater Lake Sediment	MTKNKSQLEWAMSFWIGIGLMSIINVWKIIQNQHALSYSWIMFGISVIFVIICLILIKTK
Ga0268277_10110553	3300028168	Saline Water	MMHQTKRIFELAISFWIGIGLMSIINVWKISQNQNALSYSWIMFGISIIFIIIATIMCLFRKNK
Ga0268280_10049637	3300028298	Saline Water	MKTKKVFELAIAFWIGIGLMSLIDIWKIASNQHAISYNWIMFGFSVLFIAISLLILLIRKKKEVK
Ga0268276_10373293	3300028299	Saline Water	MMHQTKRIFELAISFWIGIGLMSIINVWKISQNQNALSYSWIMFGISIIFIIIATIMCLF
Ga0265334_100035007	3300028573	Rhizosphere	MNKSKRQLEWAMSFWIGVGLMSLINVWKVVQNQHAVSYSWIMFWVSLIFVATCLLLINLKGKKSI
Ga0265322_100566472	3300028654	Rhizosphere	MKTNRQLEWGMSFWIGIGLMSIINVWKIINNQHAITYSWIMFAISIIFITICIILIQNNKQR
Ga0265336_101290152	3300028666	Rhizosphere	MINIHKSKRQLEWAIGFWIGIGLMSIINVWKVIQNQHAISYSWIMFCASIVAITTCVILIKIKK
Ga0302225_104482401	3300028780	Palsa	MININKNKRQLEWAIGFWMGIGLMSIINVWKIIQDQHAVTYSWIMFCTAIVAIAICVVLIKIKK
Ga0265338_100188235	3300028800	Rhizosphere	MMNKTKRQFELALSFWIGIALMCLINVWKITQGQNAVQYPWVELWISIVFIIICIVGIGIKGRKQTDNG
Ga0265338_101655622	3300028800	Rhizosphere	MSFWIGVGLMSLINVWKVVQNQHAVSYSWIMFWVSLIFVATCLLLINLKGKKSI
Ga0302268_10183622	3300028854	Bog	MIKNKRQLEWAISFWVGIGLMSIINVWKIVQKQHAISYSWIMFGISIVAIIICLILIKIK
Ga0302197_100304593	3300028873	Bog	MLNKNKRYEWGLSFWIGVGLMSIINVWKITESEHALTYSWIMFGVSVVAIVICVILLKIK
Ga0302197_102043212	3300028873	Bog	MKMINKTKRQLELATSFWIGIGLMSIINVWKVTENKHAITYSWIMFGIAVIAVMTCTI
Ga0302155_101712322	3300028874	Bog	MINKTKRQYELAASFWAGIGLMSIINVWKITENKHAITYSWIMFGLSVIFIIICAILLKIKK
Ga0311368_101015496	3300029882	Palsa	MITKRKLELGLSFWLGIGLMSIINVWKITENQHAITYSWIMFGLSVIAVIICVILIK
Ga0311341_100024303	3300029908	Bog	LEWAIAFWLGIGLMSIINVWKINQHQHAITYSWIMFCTAIVTITICVILIKIKNRPVR
Ga0311341_108398612	3300029908	Bog	NKDKTMMNKSKRQFEWAISFWIGIGLMSIINVWKISQSQNAISYSWIMFGISLIFILICAILIKRRKDSAAN
Ga0311363_102725141	3300029922	Fen	MITKRKLELGLSFWLGIGLMSIINVWKITENQHAITYSWIMSGVSVIAIIICVILIKIKK
Ga0311363_102816643	3300029922	Fen	MINKTKRQFEWAISFWIGVGLMSLINTWKISQNQNALSYSWIEFGISIIFIVICLIMIVVKGKKDI
Ga0311363_111545322	3300029922	Fen	MIRINKSKRQFEWGISFWIGIGLMSIINVWKIIQNQLAISYSWIMFWTSIVAVLTCVILIKIKK
Ga0311371_116403012	3300029951	Palsa	MITKRKLELGLSFWLGIGLMSIINVWKITENQHAITYSWIMFGVSVIAVIICLILIKIKKQA
Ga0311331_107947902	3300029954	Bog	DKTMMNKSKRQFEWAISFWIGIGLMSIINVWKISQSQNAISYSWIMFGISLIFILICAILIKRRKDSAAN
Ga0311342_111363332	3300029955	Bog	MNKTKRQFEWAISFWIGVALMCLINVWKITQGQNAVQYSWVEFGISIFFIIICLIVIVIKGKKQI
Ga0311342_112868461	3300029955	Bog	MNKTKRQFEWAISFWIGVALMCLINVWKITQGQNAVQYSWVEFGISIFFIIICLIVIGIKGKKQI
Ga0265324_103550323	3300029957	Rhizosphere	MINIHKSKRQLEWAIGFWIGIGLMSIINVWKVIQNQHAISYSWIMFCASIVAITTCVILI
Ga0302274_100469482	3300030041	Bog	MKMINKTKRQLELATSFWIGIGLMSIINVWKVTENKHAITYSWIMFGIAVIAVMTCTILIKIKK
Ga0302306_101578503	3300030043	Palsa	MITKRKLELGLSFWLGIGLMSIINVWKITENQHAITYSWIMFGLSVIAVIICVILIKIKK
Ga0302191_100192373	3300030049	Bog	MINKNKRYEWGLSFWIGVGLMSIINVWKITESEHALTYSWIMFGVSVVAIVICVILLKIK
Ga0311353_106696461	3300030399	Palsa	MININKNKRQLEWAIGFWMGIGLMSIINVWKIIQDQHAVIYSWIMFCTAIVAIAICVVLIKIKK
Ga0311370_117236091	3300030503	Palsa	KIKKWNMINKSRRQLELAASFWIGIGLMSLINVWKITENKHAITYSWIMFGVSVIIIITCAILIKIKK
Ga0302192_102618342	3300030507	Bog	MINKTKRQYELAASFWAGIGLMSIINVWKITENKHAITYSWIMFGLSVIF
Ga0311345_105632052	3300030688	Bog	SNMITKRKLELGLSFWLGIGLMSIINVWKITENQHAITYSWIMSGVSVIAIIICVILIKIKK
Ga0170834_1058095452	3300031057	Forest Soil	MINKSKRQLELAASFWIGIGLMSIINVWKITENKHAITYSWIMFGVAIIAIIICMILIKIKK
Ga0170823_138842301	3300031128	Forest Soil	MIMINKSKRQLELAASFWLGIGLMSIINVWKITENKHAITYSWIMFGVAIIAIIICMILIKIKK
Ga0170824_1100906201	3300031231	Forest Soil	MIMINKSKRQLELAASFWIGIGLMSIINVWKITENKHAITYSWIMFGVAIIAIIICMILIKIKK
Ga0265330_100806242	3300031235	Rhizosphere	MTKTKRQLEWAISFWIGIGLMSIINIWKIIQNQHAISYSWIMFGVSIIFIIICMVLIKIK
Ga0265320_104668013	3300031240	Rhizosphere	VGLMSIINVVKLLYTASAILYSWIMFGVSIIFIFICIILIKREK
Ga0302318_103280073	3300031258	Bog	MLNKNKRYEWGLSFWIGVGLMSIINVWKITESEHALTYSWIMFGVSVVAIIVCVILLIIK
Ga0302140_100891503	3300031261	Bog	MNKSKRQFEWAISFWIGIGLMSIINVWKISQSQNAISYSWIMFGISLIFILICAILIKRRKDSAAN
Ga0302320_107643631	3300031524	Bog	MNKTKRQFEWAISFWIGVALMCLINVWKITQGQNAVQYSWVEFGISIFFIII
Ga0315542_11087692	3300031552	Salt Marsh Sediment	MIFNKSKEVMKWALAFWIGIGLMSIINVIKINYTQQALPYDWIMFGISVIMIVICAILIKRKK
Ga0307374_102738142	3300031670	Soil	MINKNKRQLEWAISFWIGVGLMSIINVWKITQNQKAVPYSWIMFGVSIIAIIICVILIKIKK
Ga0315291_105695202	3300031707	Sediment	MNQNKRHLEWGISFWIGVGLMSIINIIKIGYTQQVLPYDWIMFGVSIIFIIICAIYLIIIKKKK
Ga0310686_1015856602	3300031708	Soil	MPNKHKKYEWGISFWAGVGLMSIINVWKITDGQHALSYSWIMFCISIIFIIACVILMKIK
Ga0310686_1045813542	3300031708	Soil	AMSFWIGIGLMSIINVWKIIKNQHAITYSEIMFGVSIIFIIICAILIKVRK
Ga0315293_102869691	3300031746	Sediment	MINQNKKYLEWAISFWIGIGLMSIINVWKIIQNRNALLYSWIMFGISIIAVIICVILIKRKGGRHSSQA
Ga0315288_115921581	3300031772	Sediment	MTNQNKRYLEWAISFWIGIGLMSIINIWKIIQNQHALSYSWIMFGISIIAIIICTVLIKIKK
Ga0315294_114714293	3300031952	Sediment	MINQNKKYLEWAISFWIGIGLMSIINVWKIIQNRNALLYSWIMFGISIIAVI
Ga0315277_10000010290	3300032118	Sediment	MTKQKRYLEWAIAFWLGIGLMSIINIWKINTNQNAITYNWIMFWVSIVFIIISIILLITNKRR
Ga0315281_106590412	3300032163	Sediment	MKDKRYLEWGISFWMGIGLMSIINVWKIIQNQHALSYSWIMFGISIIAIIICVILIKIKKSPTRNGGY
Ga0315275_1000001213	3300032401	Sediment	MTNQNKRILELAMCFWIGIGLMSIINVWKIIQNQHALSYSWIMFGISVIFVIICLILIKTKK
Ga0315275_124278871	3300032401	Sediment	MEKQNKRRYLEWGISFWLGIGLMSIINIWKIVKNQHALSYSWIMFGISIIMLIICMILIKKRN
Ga0326726_100752671	3300033433	Peat Soil	MINKSKRTFELAIAFWIGIGLMSIINVWKITQSQNAVSYFWIMFGFSVIFIVICAILIAIKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087940

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences