Metagenome / Metatranscriptome Family F087903

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F087903
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	58 residues
Representative Sequence	MKTNIITEEEQIEEILTEANAYNLRQEVITTASIFMKDDPELDKVAAYQMAYMEWIK
Number of Associated Samples	90
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.45 %
% of genes near scaffold ends (potentially truncated)	23.64 %
% of genes from short scaffolds (< 2000 bps)	72.73 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (83.636 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (33.636 % of family members)
Environment Ontology (ENVO)	Unclassified (74.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (88.182 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.06% β-sheet: 0.00% Coil/Unstructured: 52.94%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
a.73.1.1: Retrovirus capsid protein, N-terminal core domain	d1em9a_	1em9	0.67334
c.37.1.20: Extended AAA-ATPase domain	d1lv7a_	1lv7	0.66799
e.22.1.2: Iron-containing alcohol dehydrogenase	d1vlja1	1vlj	0.66086
c.37.1.20: Extended AAA-ATPase domain	d1fnna2	1fnn	0.65191
e.22.1.2: Iron-containing alcohol dehydrogenase	d1jq5a_	1jq5	0.65106

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00856	SET	17.27
PF04024	PspC	5.45
PF01165	Ribosomal_S21	3.64
PF00535	Glycos_transf_2	2.73
PF00149	Metallophos	1.82
PF05159	Capsule_synth	1.82
PF12850	Metallophos_2	0.91
PF00313	CSD	0.91
PF01258	zf-dskA_traR	0.91
PF08406	CbbQ_C	0.91
PF07592	DDE_Tnp_ISAZ013	0.91
PF00160	Pro_isomerase	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	3.64
COG3562	Capsule polysaccharide modification protein KpsS	Cell wall/membrane/envelope biogenesis [M]	1.82
COG3563	Capsule polysaccharide export protein KpsC/LpsZ	Cell wall/membrane/envelope biogenesis [M]	1.82
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG0714	MoxR-like ATPase	General function prediction only [R]	0.91
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.18 %
Unclassified	root	N/A	11.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.64 %
Unclassified	root	N/A	11.82 %
Viruses	superkingdom	All Organisms → Viruses	4.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.64 %
Unclassified	root	N/A	11.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.55 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	82.73 %
Unclassified	root	N/A	11.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.55 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	82.73 %
Unclassified	root	N/A	11.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.55 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	82.73 %
Unclassified	root	N/A	11.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.55 %

Name	Rank	Taxonomy	Distribution
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	81.82 %
Unclassified	root	N/A	11.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.55 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	81.82 %
Unclassified	root	N/A	11.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.55 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573027\|GS312G0146KB_1113212356106	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	948	Open in IMG/M
3300000117\|DelMOWin2010_c10001378	Not Available	15650	Open in IMG/M
3300000128\|SA_S1_NOR08_45mDRAFT_c10036080	All Organisms → Viruses → Predicted Viral	1960	Open in IMG/M
3300001450\|JGI24006J15134_10005492	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	6603	Open in IMG/M
3300001460\|JGI24003J15210_10014598	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	3098	Open in IMG/M
3300001460\|JGI24003J15210_10026968	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2127	Open in IMG/M
3300001460\|JGI24003J15210_10033975	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1835	Open in IMG/M
3300001460\|JGI24003J15210_10039935	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1638	Open in IMG/M
3300001460\|JGI24003J15210_10102888	Not Available	813	Open in IMG/M
3300001472\|JGI24004J15324_10033477	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1645	Open in IMG/M
3300003543\|FS898DNA_10484309	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	740	Open in IMG/M
3300004097\|Ga0055584_100177038	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2159	Open in IMG/M
3300004448\|Ga0065861_1006059	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3511	Open in IMG/M
3300004448\|Ga0065861_1029768	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1458	Open in IMG/M
3300005404\|Ga0066856_10225488	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	813	Open in IMG/M
3300005404\|Ga0066856_10293582	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	701	Open in IMG/M
3300005427\|Ga0066851_10058865	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1292	Open in IMG/M
3300006737\|Ga0098037_1234662	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	592	Open in IMG/M
3300006737\|Ga0098037_1249906	Not Available	569	Open in IMG/M
3300006750\|Ga0098058_1160275	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	592	Open in IMG/M
3300006750\|Ga0098058_1196006	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	526	Open in IMG/M
3300006803\|Ga0075467_10022754	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	4025	Open in IMG/M
3300006920\|Ga0070748_1007754	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	4739	Open in IMG/M
3300006924\|Ga0098051_1106622	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	750	Open in IMG/M
3300007231\|Ga0075469_10037969	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1505	Open in IMG/M
3300008470\|Ga0115371_11217394	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	543	Open in IMG/M
3300009080\|Ga0102815_10272184	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	935	Open in IMG/M
3300009428\|Ga0114915_1006840	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	4529	Open in IMG/M
3300009428\|Ga0114915_1154854	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	649	Open in IMG/M
3300009436\|Ga0115008_10668098	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	752	Open in IMG/M
3300009447\|Ga0115560_1060103	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1649	Open in IMG/M
3300009593\|Ga0115011_10679722	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	839	Open in IMG/M
3300009785\|Ga0115001_10052138	All Organisms → Viruses → Predicted Viral	2694	Open in IMG/M
3300009790\|Ga0115012_11329750	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	610	Open in IMG/M
3300011253\|Ga0151671_1123207	Not Available	685	Open in IMG/M
3300012413\|Ga0138258_1032359	Not Available	919	Open in IMG/M
3300012920\|Ga0160423_10978190	Not Available	567	Open in IMG/M
3300013098\|Ga0164320_10009121	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	3734	Open in IMG/M
3300013101\|Ga0164313_11705077	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	506	Open in IMG/M
3300017706\|Ga0181377_1005821	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	3258	Open in IMG/M
3300017708\|Ga0181369_1005165	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	3486	Open in IMG/M
3300017709\|Ga0181387_1000289	All Organisms → cellular organisms → Bacteria	11889	Open in IMG/M
3300017709\|Ga0181387_1005665	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2456	Open in IMG/M
3300017709\|Ga0181387_1010077	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1830	Open in IMG/M
3300017713\|Ga0181391_1021617	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1599	Open in IMG/M
3300017717\|Ga0181404_1075395	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	836	Open in IMG/M
3300017720\|Ga0181383_1069838	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	943	Open in IMG/M
3300017728\|Ga0181419_1174267	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	510	Open in IMG/M
3300017729\|Ga0181396_1050942	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	826	Open in IMG/M
3300017730\|Ga0181417_1070750	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	848	Open in IMG/M
3300017740\|Ga0181418_1087325	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	759	Open in IMG/M
3300017743\|Ga0181402_1017123	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2107	Open in IMG/M
3300017751\|Ga0187219_1213033	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	530	Open in IMG/M
3300017753\|Ga0181407_1009224	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2838	Open in IMG/M
3300017757\|Ga0181420_1020603	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2196	Open in IMG/M
3300017758\|Ga0181409_1141200	Not Available	707	Open in IMG/M
3300017759\|Ga0181414_1055283	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1060	Open in IMG/M
3300017763\|Ga0181410_1017543	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2391	Open in IMG/M
3300017764\|Ga0181385_1092518	Not Available	927	Open in IMG/M
3300017765\|Ga0181413_1218018	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	567	Open in IMG/M
3300017768\|Ga0187220_1078712	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	994	Open in IMG/M
3300017771\|Ga0181425_1041691	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1503	Open in IMG/M
3300017773\|Ga0181386_1079520	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1033	Open in IMG/M
3300017950\|Ga0181607_10347575	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	821	Open in IMG/M
3300019009\|Ga0192880_10093841	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	765	Open in IMG/M
3300020165\|Ga0206125_10312900	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	585	Open in IMG/M
3300020173\|Ga0181602_10370314	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	571	Open in IMG/M
3300020317\|Ga0211688_1005594	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	3158	Open in IMG/M
3300020347\|Ga0211504_1013307	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2379	Open in IMG/M
3300020378\|Ga0211527_10063218	All Organisms → Viruses → Predicted Viral	1128	Open in IMG/M
3300020379\|Ga0211652_10011661	All Organisms → Viruses → Predicted Viral	2648	Open in IMG/M
3300020382\|Ga0211686_10075372	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1371	Open in IMG/M
3300020404\|Ga0211659_10246141	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	794	Open in IMG/M
3300020436\|Ga0211708_10462873	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	520	Open in IMG/M
3300020469\|Ga0211577_10261243	Not Available	1111	Open in IMG/M
3300020469\|Ga0211577_10808148	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	539	Open in IMG/M
3300020475\|Ga0211541_10372120	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	698	Open in IMG/M
3300021185\|Ga0206682_10166273	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1028	Open in IMG/M
3300021364\|Ga0213859_10404521	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	604	Open in IMG/M
3300021368\|Ga0213860_10121779	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1146	Open in IMG/M
3300021375\|Ga0213869_10005390	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	8127	Open in IMG/M
3300021375\|Ga0213869_10010324	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	5610	Open in IMG/M
3300021375\|Ga0213869_10398702	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	563	Open in IMG/M
3300021505\|Ga0190327_1064489	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	557	Open in IMG/M
(restricted) 3300022938\|Ga0233409_10272798	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	585	Open in IMG/M
(restricted) 3300024529\|Ga0255044_10480872	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	525	Open in IMG/M
3300025048\|Ga0207905_1002881	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	3477	Open in IMG/M
3300025048\|Ga0207905_1003474	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	3106	Open in IMG/M
3300025048\|Ga0207905_1007479	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1982	Open in IMG/M
3300025071\|Ga0207896_1024955	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1026	Open in IMG/M
3300025112\|Ga0209349_1002608	Not Available	8475	Open in IMG/M
3300025120\|Ga0209535_1045204	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1928	Open in IMG/M
3300025120\|Ga0209535_1084937	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1185	Open in IMG/M
3300025120\|Ga0209535_1149259	Not Available	740	Open in IMG/M
3300025127\|Ga0209348_1009661	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	3906	Open in IMG/M
3300025127\|Ga0209348_1161786	Not Available	651	Open in IMG/M
3300025127\|Ga0209348_1162127	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	650	Open in IMG/M
3300025151\|Ga0209645_1032510	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1913	Open in IMG/M
3300025276\|Ga0208814_1039127	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1447	Open in IMG/M
3300025759\|Ga0208899_1195445	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	648	Open in IMG/M
3300027752\|Ga0209192_10022729	All Organisms → Viruses → Predicted Viral	3097	Open in IMG/M
3300027845\|Ga0209271_10044990	Not Available	1833	Open in IMG/M
3300027849\|Ga0209712_10184320	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1191	Open in IMG/M
3300028130\|Ga0228619_1025230	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1850	Open in IMG/M
3300029448\|Ga0183755_1014545	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2866	Open in IMG/M
3300029787\|Ga0183757_1017287	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1813	Open in IMG/M
3300031519\|Ga0307488_10679690	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	585	Open in IMG/M
3300031569\|Ga0307489_11297271	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	527	Open in IMG/M
3300031621\|Ga0302114_10059966	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1846	Open in IMG/M
3300031700\|Ga0302130_1155435	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	713	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.09%
Sediment	Environmental → Aquatic → Sediment	0.91%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	37.27%
Strait	Environmental → Aquatic → Marine → Strait	20.91%
Coastal	Environmental → Aquatic → Marine → Coastal	14.55%
Unclassified	Environmental → Aquatic → Marine → Unclassified	12.73%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.45%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	3.64%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.82%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.82%
Inlet	Environmental → Aquatic → Marine → Inlet	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	36.36%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	20.91%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	13.64%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	12.73%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	2.73%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.82%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.82%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.82%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.91%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.91%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.91%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.91%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.91%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	33.64%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	20.91%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	11.82%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	5.45%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.64%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	2.73%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.82%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.82%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.82%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	1.82%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.91%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.91%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.91%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.91%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.91%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.91%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine	0.91%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine	0.91%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.91%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.91%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.91%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.91%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	0.91%
Hydrothermal Vent Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Hydrothermal Vent Sediment	0.91%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.91%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573027	Estuarine microbial communities from Columbia River, sample from CR-7km from mouth, GS312-FOS-0p8-CR7-chlmax	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300000128	Marine microbial communities from chronically polluted sediments in Adventfjord, Norway : sample - Svalbard Archipelago station 1 sample NOR 08_45m	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300003543	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS898_N3Area_DNA	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300005404	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300007231	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA	Environmental	Open in IMG/M
3300008470	Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009428	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009447	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300011253	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, permeate	Environmental	Open in IMG/M
3300012413	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA6.ICE_1m.20151110 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300013098	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay11, Core 4567-28, 0-3 cm	Environmental	Open in IMG/M
3300013101	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cm	Environmental	Open in IMG/M
3300017706	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaG	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300017729	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11	Environmental	Open in IMG/M
3300017730	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017751	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300019009	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_067 - TARA_N000000756 (ERX1782233-ERR1711966)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)	Environmental	Open in IMG/M
3300020317	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555998-ERR599027)	Environmental	Open in IMG/M
3300020347	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)	Environmental	Open in IMG/M
3300020378	Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556006-ERR599102)	Environmental	Open in IMG/M
3300020379	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)	Environmental	Open in IMG/M
3300020382	Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX556058-ERR599059)	Environmental	Open in IMG/M
3300020404	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020475	Marine microbial communities from Tara Oceans - TARA_B100002029 (ERX555951-ERR599001)	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300021375	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132	Environmental	Open in IMG/M
3300021505	Hydrothermal vent sediment bacterial communities from Southern Trench, Guaymas Basin, Mexico - 4872-04-0-1_MG	Environmental	Open in IMG/M
3300022938 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_13_MG	Environmental	Open in IMG/M
3300024529 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_21	Environmental	Open in IMG/M
3300025048	Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)	Environmental	Open in IMG/M
3300025071	Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300027845	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2 (SPAdes)	Environmental	Open in IMG/M
3300027849	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028130	Seawater microbial communities from Monterey Bay, California, United States - 22D	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031569	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2	Environmental	Open in IMG/M
3300031621	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Surface	Environmental	Open in IMG/M
3300031700	Marine microbial communities from Western Arctic Ocean, Canada - CB9_surface	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GS312G0146KB_00367220	2189573027	Marine Estuarine	MINRGREWDWMEEEVQVEEILSEANAYNLKAEVNITAMKFMKEDPELSKVAAYQMAYIEWVK
DelMOWin2010_100013782	3300000117	Marine	MINTGREWDFMEDEVQIEEILTEANAYNLKQEVITTAEVFMKDDPELNKVIAYEMAYMEWIK*
SA_S1_NOR08_45mDRAFT_100360803	3300000128	Marine	MINSKREWVYDIEQILIEATAYNLRQEVINTAESFIKEDPDLNKANAYAMAYMEWIK*
JGI24006J15134_100054927	3300001450	Marine	MTDTVEIEIEEILTEANAYNLRDEVKTTAXMFIMXDPQLDKVSAYNMAYLEWIK*
JGI24003J15210_100145986	3300001460	Marine	MTDTVEIEIEEILTEANAYNLRDEVKTTAEMFIMDDPQLDKVSAYNMAYLEWIK*
JGI24003J15210_100269683	3300001460	Marine	MINRGREWDFVEDQAQIEEILIEANAYNLKAEVNTTAAMFMEDDPDLSKVVAYQMAYMEWIK*
JGI24003J15210_100339752	3300001460	Marine	MKDTITEEEQIEQILEEANAYNLRQEVITTAETFIKDDPELDKIVAYEMGYMEWVK*
JGI24003J15210_100399353	3300001460	Marine	MKDTITEEEQIEEVLTEANAYGLRQEVITTAAIFMKDDPELDKVSAYNMAYLEWIK*
JGI24003J15210_101028882	3300001460	Marine	MKDIITEQEQIEEIXXEANAXXLRQEVITTAAIFMKDDPELDEVAAYHMAYMEWVK*
JGI24004J15324_100334774	3300001472	Marine	MKDIITEQEQIEEILTEANAYNLRQEVITTAAIFMKDDPELDEVAAYHMAYMEWVK*
FS898DNA_104843092	3300003543	Diffuse Hydrothermal Flow Volcanic Vent	MINTGREWDFMEDEVQIEEILTEANAYNLKQEVITTAKVFMKDDPELNKVVAYEMAYIEWIK*
Ga0055584_1001770381	3300004097	Pelagic Marine	MINSGREWDFIEENIQIEEILTEANAYNLKQEVITTAAIFMKDDPELDKVSAYNMAYLEWVK*
Ga0065861_10060599	3300004448	Marine	MKDTITEEEQIEEILTEANAYSLRQEVKLTADMFVKDDPDLNKILAYEMAYMEWIK*
Ga0065861_10297685	3300004448	Marine	MRSVITEEQQIEEILAEANAYSLKSEVTTTAEMFIKDDPDLRRVIAYEMAYIEWIK*
Ga0066856_102254881	3300005404	Marine	KIMSTKDWDNKSDEEQIEQILMEANAYNLRNEVKTTAEMFIKDDPDLNKACAYDMAYMQWINPVEKN*
Ga0066856_102935822	3300005404	Marine	MNKEIETKEWDNKSDEEQIEEILTEANAYNLRQEVITTAEVFMKDDPDLNKTLAYEMAYMEWIK*
Ga0066851_100588652	3300005427	Marine	MEIMETKEWDSKSDEEQIEEILTEANAYNLRQEVKVTAETFIKDDPDLNKALAYEMAYKEWIK*
Ga0098037_12346622	3300006737	Marine	MKTNIISEEEQIEEILTEANSYNLRQEVITTASMFMQDDPELDKVAAYQMAYMEWIK*
Ga0098037_12499062	3300006737	Marine	MKDTITEEEQIEQILEEANAYNLRQEVITTSEMFLIDDPELDRVVAYEMGFME
Ga0098058_11602752	3300006750	Marine	MINSGKEWDFMEEEVQIEEILTEANAYNLRQEVITTAEVFMKDDPDLNKAVAYEMAYMEWVK*
Ga0098058_11960062	3300006750	Marine	MINRGREWDWMEEEVQVEEILAEANAYNLKAEVNITAMKFMKEDPELSKVAAYQMAYIEWVK*
Ga0075467_100227544	3300006803	Aqueous	MINSGREWDFIEENIQIEEILTEANAYNLRQEVMTTAAIFMKDDPELDKVSAYNMAYMEWVK*
Ga0070748_10077545	3300006920	Aqueous	MINSGREWDFIEENIQIEEILTEANAYNLKQEVMTTAAIFMKDDPELDKVSAYNMAYMEWVK*
Ga0098051_11066223	3300006924	Marine	MINIGREWDWMEEEVQVEEILAEANAYNLKAEVNITAMKFMKEDPELSKVAAYQMAYIEWVK*
Ga0075469_100379695	3300007231	Aqueous	MINSGKEWDFMEDEVQIEEILAEANAYNLRQEVITTAEVFMKDDPNLNKVLAYEMAYMEWVK*
Ga0115371_112173941	3300008470	Sediment	LEEDIIQIEEILTEANAYNLRNEVMITAHSFIKDDPDLDKVAAFQMAYIEWVKN*
Ga0102815_102721842	3300009080	Estuarine	MINRGREWDWMEEEVQVEEILTEANAYNLKAEVNITAMKFMKEDPELSKVAAYQMAYIEWVK*
Ga0114915_10068409	3300009428	Deep Ocean	MINSEREWDYMDEAVQIEEILTEANAYNLKQEVMTTAAIFMKDDPELDKVSAYNMAYLEWVK*
Ga0114915_11548541	3300009428	Deep Ocean	TKRDTEIQIEEILTEANAYSLRAEVILTANTFMKEDPDLDKILAYEMAYMEWIK*
Ga0115008_106680983	3300009436	Marine	MINSGREWDFIEENIQIEEILTEANAYNLKQEVITTAAIFMKDDPELDKVSAYNMAYMEWVK*
Ga0115560_10601034	3300009447	Pelagic Marine	MINSGREWDFIEENIQIEEILTEANAYNLKQEVITTAAIFMKDDPELDKVSAYN
Ga0115011_106797221	3300009593	Marine	MKKEIEKTEEEQIEEILQEANAYNLRQEVKTTAEMFIMDDPALNRALAYEMAYME
Ga0115001_100521383	3300009785	Marine	MINREREWVYDIEQILIEATAYNLRQEVINTAESFIKEDPDLNKANAYAMAYMEWIK*
Ga0115012_113297503	3300009790	Marine	DNKSDEEQIEQILMEANAYNLRNEVKTTAEMFIKDDPDLNKACAYDMAYMQWINPVEKN*
Ga0151671_11232071	3300011253	Marine	MKDTITEEEQIEEILTEANAYSLRQEVITTAAMFMKDDPGLEQIVAYQMAYMEWVK*
Ga0138258_10323592	3300012413	Polar Marine	MKELEQNIIDEMQIEELLTEANAYGLRSEVVTTAKAFIKDDPDLSKVVAYEMAYMDWVK*
Ga0160423_109781903	3300012920	Surface Seawater	MKKELEKTDGEQIEEILQEANAYNLKQEVTTTAEMFIKDDPALNRVLAYEMAYMEWIK*
Ga0164320_1000912113	3300013098	Marine Sediment	MINSGREWDWMEEEEQVEEILTEANAYNLRAEVKTTAEMFIKDDPELSKTAAYQMAYIEWIK*
Ga0164313_117050772	3300013101	Marine Sediment	MNKEIETKEWDNKSDEEQIEEILIEANAYNLRQEVITTAEVFMKDDPELNKTLAYEMAYMEWIK*
Ga0181377_10058218	3300017706	Marine	MINSEREWDWMDDKDISEEVQIEEILTEANGYNLRQEVLTTAKIFIKDDPELSRVAAHQMAYMEWIR
Ga0181369_10051654	3300017708	Marine	MINSGKEWDFMEEEVQIEEILTEANAYNLRQEVITTAEVFMKDDPDLNKAVAYEMAYMEWVK
Ga0181387_10002894	3300017709	Seawater	MKTNIITEEEQIEEILTEANAYNLRQEVITTASIFMKDDPELDKVAAYQMAYMEWIK
Ga0181387_10056657	3300017709	Seawater	MINTGREWDFMEDEVQIEEILTEANAYNLKQEVITTAEVFMKDDPELNKVVAYEMAYMEWIK
Ga0181387_10100775	3300017709	Seawater	MEQIQIEEETIEEILTEANAYNLRQEVKTTAEMFIKDDPDLNRVAAYNMAYIEWIK
Ga0181391_10216173	3300017713	Seawater	MINTGREWDFMEDEVQVEEILTEANAYNLKQEVITTAEVFMKDDPELNKVVAYEMAYMEWIK
Ga0181404_10753951	3300017717	Seawater	NSGREWDWMEEEEQVEEILTEANAYNLRAEVKTTAEMFIKDDPELSKTAAYQMAYIEWIK
Ga0181383_10698382	3300017720	Seawater	MNKEIEKTEEEQIEEILQEANAYNLRQEVKTTAEMFIMDDPALNRALAYEMAYMEWVK
Ga0181419_11742671	3300017728	Seawater	EQIEQILEEANAYNLRQEVITTAETFIKDDPELDKIVAYEMGYMEWVK
Ga0181396_10509423	3300017729	Seawater	MEEEVQVEEILTEANAYNLKAEVNITAMKFMKEDPELSKVAAYQMAYIEWVK
Ga0181417_10707501	3300017730	Seawater	KKLIKLKIMSTKDWDNKSDEEQIEQILMEANAYNLRNEVKTTAEMFIKDDPDLNKACAYDMAYMQWINPVEKN
Ga0181418_10873252	3300017740	Seawater	MNKEIETKEWDNKSDEEQIEEILTEANAYNLRQEVITTAEVFIKDDPDLNKTLAYEMAYMEWIK
Ga0181402_10171234	3300017743	Seawater	MINSGREWDWMEEEEQVEEILTEANAYNLRAEVKTTAEMFIKDDPELSKTAAIRWLT
Ga0187219_12130332	3300017751	Seawater	MEQIQTEEETIEEILTEANAYNLRQEVKTTAEMFIKDDPDLNRVAAYNMAYIEWIK
Ga0181407_10092242	3300017753	Seawater	MINRGREWDWMEEEVQVEEILSEANAYNLKAKVNITAMKFMKEDPELSKVAAYQMAYIEWVK
Ga0181420_10206032	3300017757	Seawater	MKDTITEEEQIEEILTEANAYNLRQEVITTAAMFMKDDPGVDHVVAYQMAYMEWVK
Ga0181409_11412001	3300017758	Seawater	MKDTITEEEQIEEILTEANAYSLRQEVITTAAMFMKDDPGLEQIVAYQMAYMEWVK
Ga0181414_10552835	3300017759	Seawater	EEQIEQILMEANAYNLRNEVKTTAEMFIKDDPDLNKACAYDMAYMQWINPVEKN
Ga0181410_10175434	3300017763	Seawater	MKDTITEEEQIEEILTEANAYNLRQEVITTAAMFMKDAPGLDHVVAYQMAYMEWVK
Ga0181385_10925182	3300017764	Seawater	MKDIITEEEQIEQILEEANAHNLRQEVITTSEMFLIDDPELDRVVAYEMGFMEWVK
Ga0181413_12180181	3300017765	Seawater	NIITEEEQIEEILTEANAYNLRQEVITTASIFMKDDPELDKVAAYQMAYMEWIK
Ga0187220_10787124	3300017768	Seawater	SDEEQIEQILMEANAYNLRNEVKTTAEMFIKDDPALNKVLAYEMAYMEWIK
Ga0181425_10416911	3300017771	Seawater	IQIEEETIEEILTEANAYNLRQEVKTTAEMFIKDDPDLNRVAAYNMAYIEWIK
Ga0181386_10795202	3300017773	Seawater	MKTNIITEEEKIEEILTEANAYNLRQEVITTASIFMKDDPELDKVAAYQMAYMEWIK
Ga0181607_103475753	3300017950	Salt Marsh	MINSGREWDWMEEEDQVEEILTEANAYNLRAEVKTTAEMFIKDDPELSKTAAYQMAYIEWIK
Ga0192880_100938414	3300019009	Marine	EMKTNIITEEEQIEEILTEANSYNLRQEVITTASMFMQDDTELDKVAAYQMAYMEWIK
Ga0206125_103129002	3300020165	Seawater	MINSGREWDFIEENIQIEEILTEANAYNLKQEVITTAAIFMKDDPELDKVSAYNMAYLEWVK
Ga0181602_103703141	3300020173	Salt Marsh	MINSGREWDWMEEEEQVEEILTEANAYNLRAEVKTTAEMFIKDDPELSKTAAYQMAYIEWIK
Ga0211688_10055945	3300020317	Marine	MINSEREWDFMDEGVQIEEILTEANAYNLKQEVITTAAIFMKDDPELDKVSAYNMAYLEWVK
Ga0211504_10133074	3300020347	Marine	MINSGKEWDFMEDEVRIEEILIEANAYNLRQEVITTAEVFMKDDPDLNKAVAYEMAYMEWVK
Ga0211527_100632185	3300020378	Marine	MRRMSWREEQIEEILQEANAYNLRQEVKTTAEMFIKDDPALNRALAYEMAYMEWVK
Ga0211652_100116611	3300020379	Marine	MGQIQTEEEIIEEILTEANAYNLRQEVKTTAEMFIKDDPDLNHVAAYNMAYIEWIK
Ga0211686_100753726	3300020382	Marine	EDIIQIEEILTEANAYNLRSEVMITAQSFIKDDPDLDKVSAFQMAYIEWIKN
Ga0211659_102461413	3300020404	Marine	MKTNIISEEEQIEEILTEANSYNLRQEVITTASMFMQDDPELDKVAAYQMAYMEWIK
Ga0211708_104628733	3300020436	Marine	MNKELEKTEEEQIEEILQEANAYNLRQEVKTTAEMFIKDDPALNKILAYEMAYMEWVK
Ga0211577_102612431	3300020469	Marine	MKDTITEEEQIEEILTEANAYNLRQEVITTAAMFMKDDPGLDHVVAYQMAYMEWVK
Ga0211577_108081483	3300020469	Marine	YKHGWEIEAEQIELILTEASAHNLRNEVKTTAEMFIKDDPQLERGTAYEMAYMQWIKN
Ga0211541_103721203	3300020475	Marine	YKHGWEIQAEQIELILTEANAHNLRNEVKTTAEMFIKDDPELEPGIAYEMAYMQWIKN
Ga0206682_101662732	3300021185	Seawater	MINRGREWDWMEEEVQVEEILTEANAYNLKAEVNITAMKFMKEDPELSKVAAYQMAYIEWVK
Ga0213859_104045212	3300021364	Seawater	MKTKEWDSKSDEEQIEEILTEANAYNLRQEVKVTAETFIKDDPDLNKALAYEMAYMEWIK
Ga0213860_101217792	3300021368	Seawater	MKTKEWDSKSDEEQIEEILTEANAYNLRQEVKLTAEMFIKDDPDLNKALAYEMAYLEWIK
Ga0213869_100053904	3300021375	Seawater	MINSGREWDFIEENIQIEEILTEANAYNLKQEVMTTAAIFMKDDPELDKVSAYNMAYMEWVK
Ga0213869_100103246	3300021375	Seawater	MINTGREWDFMEDEVQIEEILTEANAYNLKQEVITTAEVFMKDDPELNKVIAYEMAYMEWIK
Ga0213869_103987022	3300021375	Seawater	MINSGKEWDFMEDEVQIEEILAEANAYNLRQEVITTAEVFMKDDPNLNKVLAYEMAYMEWVK
Ga0190327_10644893	3300021505	Hydrothermal Vent Sediment	KEWDNKSEEEQIEEILTEANAYNLRQEVKLTAEMFIKDDPDLNKALAYEMAYIEWIK
(restricted) Ga0233409_102727981	3300022938	Seawater	MINRGREWDWMEEEVQVEEILTEANAYNLKAEVNITAMKFMKEDPELSKVAA
(restricted) Ga0255044_104808723	3300024529	Seawater	EWDWMEEEVQVEEILTEANAYNLKAEVNITAMKFMKEDPELSKVAAYQMAYIEWVK
Ga0207905_10028817	3300025048	Marine	MTDTVEIEIEEILTEANAYNLRDEVKTTAEMFIMDDPQLDKVSAYNMAYLEWIK
Ga0207905_100347411	3300025048	Marine	MINTGREWDFMEDEVQIEEILTEANAYNLKQEVITTAKVFMKDDPELNKVVAYEMAYIEWIK
Ga0207905_10074793	3300025048	Marine	MKDIITEQEQIEEILTEANAYNLRQEVITTAAIFMKDDPELDEVAAYHMAYMEWVK
Ga0207896_10249553	3300025071	Marine	MKDTITEEEQIEEVLTEANAYGLRQEVITTAAIFMKDDPELDKVSAYNMAYLEWIK
Ga0209349_100260816	3300025112	Marine	METKEWDSKSDEEQIEEILTEANAYNLRQEVKVTAETFIKDDPDLNKALAYEMAYKEWIK
Ga0209535_10452043	3300025120	Marine	MKDTITEEEQIEQILEEANAYNLRQEVITTAETFIKDDPELDKIVAYEMGYMEWVK
Ga0209535_10849375	3300025120	Marine	MKDTITEEEQIEEILTEANAYNLRQEVKLTADIFVKDDPDLNKILAYEMAYMEWIK
Ga0209535_11492592	3300025120	Marine	MKDIITEQEQIEEILAEANAYSLRQEVITTAAIFMKDDPELDEVAAYHMAYMEWVK
Ga0209348_10096616	3300025127	Marine	MNKEIEKTEEEQIEEILQEANAYNLRQEVKTTAEMFIKDDPALNRALAYEMAYMEWVK
Ga0209348_11617862	3300025127	Marine	MEETNYDNKTEQEQIEEILMEANAYNLRKEVKLAAEMFIKDDPDLNKALAYEMALLQWTK
Ga0209348_11621271	3300025127	Marine	MNKEIETKEWDNKSDEEQIEEILTEANAYNLRQEVITTAEVFMKDDPDLNKTLAYEMAYMEWIK
Ga0209645_10325104	3300025151	Marine	MKTKEWDNKSEEEQIEEILTEANAYNLRQEVKLTAEMFIKDDPDLNKALAYEMAYIEWIK
Ga0208814_10391275	3300025276	Deep Ocean	MINSEREWDYMDEAVQIEEILTEANAYNLKQEVMTTAAIFMKDDPELDKVSAYNMAYLEWVK
Ga0208899_11954452	3300025759	Aqueous	MKTKEWDNKSDEEQIEEILTEANAYNLRQEVKLTAEMFIKDDPDLNKALAYEMAYLEWIK
Ga0209192_100227296	3300027752	Marine	MINSKREWVYDIEQILIEATAYNLRQEVINTAESFIKEDPDLNKANAYAMAYMEWIK
Ga0209271_100449901	3300027845	Marine Sediment	MKDTITEEEQIEEILTEANAYSLRQEVKLTADMFVKDDPDLNKILAYEMAYMEWIK
Ga0209712_101843202	3300027849	Marine	MIVPHDDDFMDDAIQIEEILTEANAYSLREEVKLTANTFIQEDPDLDKVLAYQMAYIDWI
Ga0228619_10252301	3300028130	Seawater	EEVQVEEILTEANAYNLKAEVNITAMKFMKEDPELSKVAAYQMAYIEWVK
Ga0183755_10145456	3300029448	Marine	MKDTITEEEQIEQILEEANAYNLRQEVITTSEMFLIDDPELDRVVAYEMGFMEWVK
Ga0183757_10172872	3300029787	Marine	MKKEIEKTEEEQIEEILQEANAYNLRQEVKTTAEMFIMDDPALNRALAYEMAYMEWVK
Ga0307488_106796901	3300031519	Sackhole Brine	IQIEEILTEANAYSLRAEVILTANTFIKEDPDLDKVLAYEMAYMDWIK
Ga0307489_112972713	3300031569	Sackhole Brine	RDVQIEEILTEANAYSLREEVKLTANTFIQKDPDLDKVLAHEMAYLEWIK
Ga0302114_100599662	3300031621	Marine	MINGEREWVYDIEQILIEATAYNLRQEVINTAESFIKEDPDLNKANAYAMAYMEWIK
Ga0302130_11554351	3300031700	Marine	MINGEREWVYDIEQILIEATAYNLRQEVINTAESFIKEDPDLNKANAYAMAFMEWIK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters