Metagenome / Metatranscriptome Family F087852

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087852
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	94 residues
Representative Sequence	MSFFRHGEIYRPMDNRNVPGRPWHNRPRPHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGFGQGSTIELQRTVNRLLTPCLTQGDNPK
Number of Associated Samples	99
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.09 %
% of genes near scaffold ends (potentially truncated)	62.73 %
% of genes from short scaffolds (< 2000 bps)	76.36 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.364 % of family members)
Environment Ontology (ENVO)	Unclassified (20.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.818 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.08% β-sheet: 0.00% Coil/Unstructured: 76.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.17
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.17
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF13683	rve_3	56.36
PF01527	HTH_Tnp_1	26.36
PF00873	ACR_tran	2.73
PF02585	PIG-L	0.91
PF00596	Aldolase_II	0.91
PF00486	Trans_reg_C	0.91
PF00501	AMP-binding	0.91
PF01381	HTH_3	0.91
PF13701	DDE_Tnp_1_4	0.91
PF02371	Transposase_20	0.91
PF03795	YCII	0.91
PF00498	FHA	0.91
PF13276	HTH_21	0.91
PF00174	Oxidored_molyb	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.91
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.91
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.91
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.91
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	74.55 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	36.36 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	22.73 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.36 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	18.18 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.55 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.36 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	18.18 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.55 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.36 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	18.18 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	2.73 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.36 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	18.18 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2.73 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001616\|JGI20268J16351_10269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300004139\|Ga0058897_10932697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300004267\|Ga0066396_10024059	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300005531\|Ga0070738_10063493	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2195	Open in IMG/M
3300005534\|Ga0070735_10323873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	927	Open in IMG/M
3300005537\|Ga0070730_10124221	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300005602\|Ga0070762_10012778	All Organisms → cellular organisms → Bacteria	4255	Open in IMG/M
3300005921\|Ga0070766_10069430	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300005994\|Ga0066789_10285006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300006041\|Ga0075023_100454493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300006047\|Ga0075024_100292597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300006162\|Ga0075030_100141195	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300009088\|Ga0099830_10161928	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1728	Open in IMG/M
3300009088\|Ga0099830_11070386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300009090\|Ga0099827_10217173	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1596	Open in IMG/M
3300009637\|Ga0116118_1272286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300009643\|Ga0116110_1044670	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1607	Open in IMG/M
3300009824\|Ga0116219_10614457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300009839\|Ga0116223_10285811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	987	Open in IMG/M
3300010379\|Ga0136449_100444349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2278	Open in IMG/M
3300010379\|Ga0136449_101458770	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1051	Open in IMG/M
3300011120\|Ga0150983_11109279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300011120\|Ga0150983_12656245	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300011269\|Ga0137392_10173242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1754	Open in IMG/M
3300012010\|Ga0120118_1007064	All Organisms → cellular organisms → Bacteria	3377	Open in IMG/M
3300012199\|Ga0137383_10364505	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300012202\|Ga0137363_10998209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300012351\|Ga0137386_10136444	All Organisms → cellular organisms → Bacteria → Acidobacteria	1751	Open in IMG/M
3300012927\|Ga0137416_11694555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300014158\|Ga0181521_10101783	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1761	Open in IMG/M
3300014158\|Ga0181521_10184668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1158	Open in IMG/M
3300014158\|Ga0181521_10514396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300014159\|Ga0181530_10195720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1116	Open in IMG/M
3300014164\|Ga0181532_10107662	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1726	Open in IMG/M
3300014489\|Ga0182018_10137474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1403	Open in IMG/M
3300014501\|Ga0182024_10289011	All Organisms → cellular organisms → Bacteria	2174	Open in IMG/M
3300014501\|Ga0182024_10496757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1553	Open in IMG/M
3300017924\|Ga0187820_1018393	All Organisms → cellular organisms → Bacteria → Acidobacteria	1738	Open in IMG/M
3300017927\|Ga0187824_10085437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1004	Open in IMG/M
3300017936\|Ga0187821_10214051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300017937\|Ga0187809_10326756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300017943\|Ga0187819_10023393	All Organisms → cellular organisms → Bacteria	3607	Open in IMG/M
3300017996\|Ga0187891_1033671	All Organisms → cellular organisms → Bacteria → Acidobacteria	2277	Open in IMG/M
3300018022\|Ga0187864_10180672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1016	Open in IMG/M
3300018025\|Ga0187885_10115873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1290	Open in IMG/M
3300018035\|Ga0187875_10109020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1569	Open in IMG/M
3300018037\|Ga0187883_10084593	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300018040\|Ga0187862_10138018	All Organisms → cellular organisms → Bacteria → Acidobacteria	1654	Open in IMG/M
3300019786\|Ga0182025_1006770	All Organisms → cellular organisms → Bacteria → Acidobacteria	1490	Open in IMG/M
3300020579\|Ga0210407_10223915	All Organisms → cellular organisms → Bacteria → Acidobacteria	1463	Open in IMG/M
3300020580\|Ga0210403_11392899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300020581\|Ga0210399_10261820	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1442	Open in IMG/M
3300020582\|Ga0210395_10148856	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1746	Open in IMG/M
3300020582\|Ga0210395_10216505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1437	Open in IMG/M
3300021088\|Ga0210404_10089143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1535	Open in IMG/M
3300021171\|Ga0210405_10233417	All Organisms → cellular organisms → Bacteria → Acidobacteria	1456	Open in IMG/M
3300021178\|Ga0210408_10103948	All Organisms → cellular organisms → Bacteria → Acidobacteria	2233	Open in IMG/M
3300021180\|Ga0210396_10060389	All Organisms → cellular organisms → Bacteria	3461	Open in IMG/M
3300021432\|Ga0210384_10323680	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1388	Open in IMG/M
3300021474\|Ga0210390_10227200	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1579	Open in IMG/M
3300021476\|Ga0187846_10072928	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1495	Open in IMG/M
3300021477\|Ga0210398_10212921	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1574	Open in IMG/M
3300021477\|Ga0210398_10214951	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1566	Open in IMG/M
3300021477\|Ga0210398_11392968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300021479\|Ga0210410_10385828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1255	Open in IMG/M
3300021559\|Ga0210409_10014525	All Organisms → cellular organisms → Bacteria	7793	Open in IMG/M
3300022881\|Ga0224545_1008778	All Organisms → cellular organisms → Bacteria → Acidobacteria	1569	Open in IMG/M
3300023030\|Ga0224561_1011092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300023259\|Ga0224551_1063461	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300024227\|Ga0228598_1086053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300024325\|Ga0247678_1032528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300025320\|Ga0209171_10006048	All Organisms → cellular organisms → Bacteria	13101	Open in IMG/M
3300026551\|Ga0209648_10146883	All Organisms → cellular organisms → Bacteria	1867	Open in IMG/M
3300027109\|Ga0208603_1009454	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1610	Open in IMG/M
3300027674\|Ga0209118_1025590	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1843	Open in IMG/M
3300027853\|Ga0209274_10029166	All Organisms → cellular organisms → Bacteria	2547	Open in IMG/M
3300027855\|Ga0209693_10013691	All Organisms → cellular organisms → Bacteria → Acidobacteria	3827	Open in IMG/M
3300027857\|Ga0209166_10106689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1559	Open in IMG/M
3300027867\|Ga0209167_10086801	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1584	Open in IMG/M
3300027889\|Ga0209380_10036604	All Organisms → cellular organisms → Bacteria → Acidobacteria	2776	Open in IMG/M
3300027908\|Ga0209006_10157893	All Organisms → cellular organisms → Bacteria	1988	Open in IMG/M
3300027911\|Ga0209698_10204055	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1598	Open in IMG/M
3300027915\|Ga0209069_10380580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300027965\|Ga0209062_1017728	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4583	Open in IMG/M
3300028020\|Ga0265351_1023821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300028023\|Ga0265357_1002150	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1573	Open in IMG/M
3300028536\|Ga0137415_10034738	All Organisms → cellular organisms → Bacteria	4949	Open in IMG/M
3300028558\|Ga0265326_10135595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300029636\|Ga0222749_10036460	All Organisms → cellular organisms → Bacteria	2117	Open in IMG/M
3300030007\|Ga0311338_11915077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300030862\|Ga0265753_1001683	All Organisms → cellular organisms → Bacteria	1978	Open in IMG/M
3300031057\|Ga0170834_111571820	All Organisms → cellular organisms → Bacteria	2346	Open in IMG/M
3300031128\|Ga0170823_11369374	All Organisms → cellular organisms → Bacteria	2162	Open in IMG/M
3300031231\|Ga0170824_104945745	All Organisms → cellular organisms → Bacteria → Acidobacteria	3170	Open in IMG/M
3300031235\|Ga0265330_10264443	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300031241\|Ga0265325_10084843	All Organisms → cellular organisms → Bacteria → Acidobacteria	1569	Open in IMG/M
3300031670\|Ga0307374_10531806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300031708\|Ga0310686_101432728	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300031708\|Ga0310686_107359096	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1556	Open in IMG/M
3300031711\|Ga0265314_10227924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1083	Open in IMG/M
3300031820\|Ga0307473_10013431	All Organisms → cellular organisms → Bacteria → Acidobacteria	3082	Open in IMG/M
3300031962\|Ga0307479_10176439	All Organisms → cellular organisms → Bacteria → Acidobacteria	2100	Open in IMG/M
3300032160\|Ga0311301_11126203	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300032180\|Ga0307471_102448142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300032205\|Ga0307472_100044249	All Organisms → cellular organisms → Bacteria	2718	Open in IMG/M
3300032783\|Ga0335079_11215775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300032892\|Ga0335081_11628683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300032895\|Ga0335074_10001234	All Organisms → cellular organisms → Bacteria	34979	Open in IMG/M
3300032895\|Ga0335074_10394723	All Organisms → cellular organisms → Bacteria → Acidobacteria	1505	Open in IMG/M
3300034125\|Ga0370484_0028135	All Organisms → cellular organisms → Bacteria → Acidobacteria	1326	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.55%
Host-Associated	Host-Associated	5.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.73%
Aquatic	Environmental → Aquatic	21.82%
Plants	Host-Associated → Plants	5.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.09%
Freshwater	Environmental → Aquatic → Freshwater	16.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.45%
Sediment	Environmental → Aquatic → Sediment	4.55%
Peat	Environmental → Terrestrial → Peat	2.73%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.91%
Cave	Environmental → Terrestrial → Cave	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.36%
Loam	Environmental → Terrestrial → Soil → Loam	11.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.73%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.91%
Clay	Environmental → Terrestrial → Soil → Clay	0.91%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.82%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.00%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.82%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.55%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	4.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.73%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.82%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.82%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.91%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.91%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.91%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001616	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF034	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300028020	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4	Environmental	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20268J16351_102692	3300001616	Forest Soil	MSFPRHEEIYRPMGMAKRLGRPTCGHPSAHRYDEFPAGYSLVGCAPAEPASASPAGAHGAPEASSSTIEIQRTANYLLTACLTRGDNPKSL
Ga0058897_109326972	3300004139	Forest Soil	MSFSRHEEIYHPIAKANRLGRPTHGHPSAHRYDEFPAGYSLAGCAPAEPASASPAGAHGAGFGSSTTIDLQRMVNSLLIACLIQGDNPKSLFLFMELNRREI
Ga0066396_100240592	3300004267	Tropical Forest Soil	MSFLRHEEIYRPMSSWRRRSSSDRPRPHRYDEFPAGYSLVGCAPAEPTSASPAEAHRQATGGGSTIEKQQTVGSVLTACLTQGDNP
Ga0070738_100634933	3300005531	Surface Soil	MSFLRHGEIYRPISSESKPGQPYLDRPGPHRYDEFPAGYSLAGCAPAEPASASPAEAHREAGRSGGTIEKQRTVGSVLTACLTQRDNPSGRQD*
Ga0070735_103238731	3300005534	Surface Soil	MSFLRHEEIYRPMSSVPGRPDRDRPRPHRFDEFPAGYSLVGCAPALPASASPAEAHREAVRSGCTIEKQRTVGSVLTVCLTRGDNR
Ga0070730_101242211	3300005537	Surface Soil	MSFLRHGEIYRPMQKRERPAHDRPQPHRYDEFPAGYSLAGCAPAEPASASPAVAHSAGNALGSTIKKQRTANHLLTMCLTQGDNLTPPFSSYGWSLNK*
Ga0070762_100127786	3300005602	Soil	MSFLRHGEIYRPMQKRERPANDRPRPHRYDEFPAGYSLAGCAPAEPTSASPAAVHTAAKTLGSTIKMQRTANHLLTACLTQGDNLKSNPRLKLGKLLLKL*
Ga0070766_100694302	3300005921	Soil	MSFPRHEEIYRPMATANRLRRPLHGRPNVHRYDEFPAGYSLVGCAPAEPASASPAGAHPDAEEGRCTIEKQRTANRLLTGCLTAGDNFNLSFPESKPKRDSSLRSE*
Ga0066789_102850062	3300005994	Soil	MSFFRHGEIYRPMDNRNVPGRPWHNRPRPHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGFGQGSTIELQRTVNRLLTPCLTQGDNPK
Ga0075023_1004544931	3300006041	Watersheds	MSFPRHEEIYRPMATANRLRRPLHGRPNVHRYDEFPAGYSLVGCAPAEPASASPAGAHPDAEEGRCTIEKQRTANRLLTGCLTAGDNFKSLFLFMGLNRREIPRFARNDKINYFFRSL*
Ga0075024_1002925972	3300006047	Watersheds	MSFSRHEEIYHPIRTANRLGRPTHGHPSAHRYDEFPAGYSLAGCAPAEPASASPAGAHGAGFGSSTTIDVQRTVNSLLIACPIQGDNPREIPRFARNDKINYFFRSL
Ga0075030_1001411951	3300006162	Watersheds	MSFPRHGEIYRPMRTANRLGRPSCGHPSAHRYDEFPAGYSLAGCAPAEPASASPAGAHGAAEAGSSTIEKQRTTNRLLTACLTLGDNP
Ga0099830_101619283	3300009088	Vadose Zone Soil	MSFPRHEEIYRPIRTANRLGRPTCGHPSAHRYDEFPAGYSLAGCAPAEPASASPAGAHRAAEALGSTMEKQRMANSLLTACLTQGDNPSLVSRFTVKSNGVVIFQLSK
Ga0099830_110703861	3300009088	Vadose Zone Soil	MSFFRHGEIYRPMSFSKMPGRPWQDRPEPHRFDEFPAGYSLAGCAPAVPASASPAGGHLRTKGRGSTIELQRTANYLLTACLTPGDNPSLVLARRRTWGKPSTGSALSG
Ga0099827_102171733	3300009090	Vadose Zone Soil	MSFPRHEEIYRPIRTANRLGRPTCGHPSAHRYDEFPAGYSLAGCAPAEPTSASPAGAYRAGFGSISTIELQRTAKCLLTPCL
Ga0116118_12722862	3300009637	Peatland	MSFFRHEEIYRPMDNRNVPGRPWHHRPRPPRYDEFPAGYSSAGCAPAEPASASPAEAHLAGIGPSSTIDLQRTVNRLLTPCLTQGDN
Ga0116110_10446703	3300009643	Peatland	MSFFRHEEIYRPMDNRNVPGRPWHHRPRPPRYDEFPAGYSSAGCAPAEPASASPAEAHLAGIGPSSTIDLQRTVNRLLTPCLTQGDNPKV*
Ga0116219_106144571	3300009824	Peatlands Soil	MSFFRHGEIYRPMDNRKVPGRPWHDLPQLHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGFGSSSTIELQRTVNRLLAPCLTQGDNPR*
Ga0116223_102858111	3300009839	Peatlands Soil	MSFFRHEEIYRPMENRTVPGRPSHDRPRPHRFDEFPTGYSLAGCAPAEPASASPAEAHLAGIMSSSTIDLPR
Ga0136449_1004443495	3300010379	Peatlands Soil	MSFFRHEEIYRPMENRTVPGRPSHDRPRPHRFDEFPTGYSLAGCAPAEPASASPAEAHLAGIMSSSTIDLPRTANRLLTPCLTQGDNPTQQQSPLFLVFREPET*
Ga0136449_1014587703	3300010379	Peatlands Soil	MSFFRHEEIYRPMDNRKVPGRPWHDLPQLHRYDEFPAGYSSAGCAPAEPASASPAGAHLAGFGSGSTIELQRTV
Ga0150983_111092792	3300011120	Forest Soil	MSFSRHEEIYHPIAKANRLGRPTHGHPSAHRYDEFPAGYSLAGCAPAEPASASPAGAHGAGFGSSTTIDLQRTVNSLLIACLIQGDNPKSLFLFMELNRREI
Ga0150983_126562452	3300011120	Forest Soil	MSFPRHEEIYRPMATANRLRRPLHGRPNVHRYDEFPAGYSLVGCAPAEPASASPAGAHPDAEEGRCTIEKQRTANRLLTGCLTAGDNFNSSLRSE*
Ga0137392_101732421	3300011269	Vadose Zone Soil	MSFFRHEEIYRPMDVENVPGRPWHNRPRPHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGFGAGCTIELQRTANRPLTPCLTQGDKPISQQTILKTRGRNAPCFADFLPGG
Ga0120118_10070644	3300012010	Permafrost	MSFFRHEEIYRPMDSKNVPGRSWHDRPRPHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGIGSGSTIELQRAVNRLLTPCLTQGDNPTVSIPDRELPDRSKHFQQ*
Ga0137383_103645052	3300012199	Vadose Zone Soil	MSFFRHEEIYRPMDSRNVPGRPWHDHPRPHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGFGSSSTIELQRTVNRLLTPCLTQGDNPKLLRNAARFNQRSWAAKCYNSGSERS*
Ga0137363_109982092	3300012202	Vadose Zone Soil	MSFFRHEEIYRPMDSRNVPGRPGHDRPRPHRYDEFPAGYSLTGCAPAEPVSASPTTTDYAVQSSCRARNLQRTANCVLTVCVSRGDKR
Ga0137386_101364441	3300012351	Vadose Zone Soil	MSFFRHGEIYRPMNSRNVPGRSWHDRPRPHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGFGSSSTIEWQRTVNRLLTPCLTQGDNPILWLLAWVTQVLSQARTVFRLLSV
Ga0137416_116945551	3300012927	Vadose Zone Soil	MSFFRHGEIYRPMNVENEPGRSWHDRLRPHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGFGSSSTIVSQRTANCLLTPCLTQGDNPIPRFARNDKRVGHFFRSL*
Ga0181521_101017833	3300014158	Bog	MSFFRHEEIYRPMDNRNVPGRPWHHRPRPPRYDEFPAGYSSAGCAPAEPASASPAEAHLAGIMSSSTIDLPRTANRLLTP
Ga0181521_101846682	3300014158	Bog	MSFFRHEEIYRPMENRTVPGRPSHDRSRPHRFDEFPTGYSLAGCALAEPASASPAEAHLAGIMSSSTIDLPRTANRLLTP
Ga0181521_105143962	3300014158	Bog	MSFSRHGEIYRPMSSSGSAPGRPWQDRPRPHRYDEFPAGYSLAACAPAEPASASPAEAHLAANEIGGTIETQRTENSVLIACLTQGDNPSLSPLFDLDL
Ga0181530_101957202	3300014159	Bog	MSFFRQEEIYRPMGNRNVPGRPWHDRPRPHRYDEFPAGYSLAGCAPAEPASASPADAHLAGTGPRSTIELQPTVNRL
Ga0181532_101076621	3300014164	Bog	MSFFRHEEIYRPMDNRNVPGRPWHHRPRPPRYDEFPAGYSSAGCAPAEPASASPAEAHLAGISPSSTIDLQRTVNRLLTPCLTQGDNPSQNRTLT*
Ga0182018_101374743	3300014489	Palsa	MSFFRHEEIYRPMDNRNVPGRPWHDRPRPHRYDEFPDGYSSAGCAPSEPASALPAGAHLAGFGSGGTIELQRMVNRLLAPCLTQGDNPK
Ga0182024_102890112	3300014501	Permafrost	MSFFRHEEIYRPMDSKNVPGRSWHDRHRPHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGFGSSSTIGLQRTGNRLLTPCLTQGDNPNQTGKRQRSVDIYPLRLKTIE*
Ga0182024_104967573	3300014501	Permafrost	MSFFRHEEIYRPMDSKNVPGRSWHDRPRPHRYDEFPAGYSSAGCAPAEPVSASPAEAHLAGIGPGSTIELQRTVNRLLTPCLTQGDNP
Ga0187820_10183933	3300017924	Freshwater Sediment	MSFLRHEEIYRPMSSVPGRPDRDRPRPHRFDEFPAGYSLVGCAPALPASASPAEAHREAVRSGCTIEKQRTVGSVLTVCLTRGDNRKAPRRERPDQAVV
Ga0187824_100854372	3300017927	Freshwater Sediment	MSFLRHEEIYRPMSSVPGRPDRDRPRPHRFDEFPAGYSLVGCAPALPASASPAEAHREAVRSGCTIEKQRTVGSVLTVCLTRGDNRISQRRTASSKETEHAAGKAL
Ga0187821_102140511	3300017936	Freshwater Sediment	MSFFRHEEIYRPMNSRNVPGRPWHDRPRPHRFDEFPAGYSSAGCAPAEPASASPAEAHLAGFGSGSTIELQRTVNRLLTPCLTQGDNPTDSLGSSTMTGTPSFVSLATALVT
Ga0187809_103267562	3300017937	Freshwater Sediment	MSFFRHEEIYRPMDNRNVPGRPWHDRPRPHRFDEFPAGYSSAGCAPAEPASASPAEAHLAGIGSGSTIELQRTANRLLTPCLTQGDNPKSHLLRPRTVFFTSSD
Ga0187819_100233933	3300017943	Freshwater Sediment	MSFLRHEEIYRPMSSVPGRPYPDRPRPHRFDEFPAGYSLAGCAPALPASASPAEAHRGARRSGCTIEKQRTVGSVLTVCLTQAEGHASGVVSRARNSTRVRI
Ga0187891_10336711	3300017996	Peatland	MSFFRHEEIYRPMDSRNVPGRPWHDRPRPHRFDEFPAGYSSAGCAPAEPASASPAEAHLAGFGSGSTIELQRTVNRLLTPCLTQGDNPMLTYRRGCKRYREKGL
Ga0187864_101806722	3300018022	Peatland	MSFSRHGEIYRPMSSSGSAPGRPWQDRPRPHRYDEFPAGYSLAACAPAEPASASPAEAHLAANEIGGTIETQRTENSVLIACLTQGDNPR
Ga0187885_101158731	3300018025	Peatland	MSFFRHEEIYRPMDNRNVPGRPWHHRPRPPRYDEFPAGYSSAGCAPAEPASASPAEAHLAGIGPSSTIDLQRTVNRLLTPCLTQGDNPMLTYRRGCKRYREKGL
Ga0187875_101090203	3300018035	Peatland	MSFLRHEEIDRPMDSRNVPGRLAHDRPRPHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGFGSGSTIELQRTVNRLLTPCLTQGDNPNI
Ga0187883_100845934	3300018037	Peatland	MSFFRHEEIYRPMDNRNVPGRPWHHRPRPPRYDEFPAGYSSAGCAPAEPASASPAEAHLAGIGPSSTIDLQRTVNRLLTPCLTQGDNP
Ga0187862_101380181	3300018040	Peatland	MSFFRHEEIYRPMDNRNVPGRPWHHRPRPPRYDEFPAGYSSAGCAPAEPASASPAEAHLAGISPSSTIDLQRTVNC
Ga0182025_10067702	3300019786	Permafrost	MSFFRHEEIYRPMDSKNVPGRSWHDRPRPHRYDEFPAGYSSAGCAPAEPVSASPAEAHLAGIGPGSTIELQRTVNRLLTPCLTQGDNPTGSLSALLARAILVEQEKQRR
Ga0210407_102239151	3300020579	Soil	MSFSRHEEIYHPIAKANRLGRPTHGHPSAHRYDEFPAGYSLAGCAPAEPASASPAGAHGAGFGSSTTIDLQRTVNSLLIACLIQGDNPR
Ga0210403_113928991	3300020580	Soil	MSFPRHEEIYRPMATANRLRRPLHGRPNVHRYDEFPAGYSLVGCAPAEPASASPAGAHPDAEEGRCTIEKQRTANRLLTGCLTAGDNFKSLLLL
Ga0210399_102618201	3300020581	Soil	MSFSRHEEIYHPIAKANRLGRPTHGHPSAHRYDEFPAGYSLAGCAPAEPASASPAGAHGAGFGSSTTIDLQRTVNSLLIACLIQGDNPRASLEAR
Ga0210395_101488561	3300020582	Soil	MSFPRHEEIYRPMATANRLRRPLHGRPNVHRYDEFPAGYSLVGCAPAEPASASPAGAHPDAEEGRCTIEKQRTANRLLTGCLTAGDNFSCLSEYC
Ga0210395_102165053	3300020582	Soil	MSFLRHGEIYRPMQKRERPANDRPRPHRYDEFPAGYSLAGCAPAEPTSASPAAVHTAAKTLGSTIKMQRTANHLLTACLTQGDNLNP
Ga0210404_100891433	3300021088	Soil	MSFPRHEEIYRPMATANRLRRPLHGRPNVHRYDEFPAGYSLVGCAPAEPASASPAGAHPDAEEGRCTIEKQRTANRLLTG
Ga0210405_102334171	3300021171	Soil	MSFSRHEEIYHPIAKANRLGRPTHGHPSAHRYDEFPAGYSLAGCAPAEPASASPAGAHGAGFGSSTTIDLQRMVNSLLIACLIQGDNPR
Ga0210408_101039482	3300021178	Soil	MSFSRHEEIYHPIAKANRLGRPTHGHPSAHRYDEFPAGYSLAGCAPAEPASASPAGAHGAGFGSSTTIDLQRTVNSLLIACLIQGDNPREILRFAQNDKINYFFRSL
Ga0210396_100603893	3300021180	Soil	MSFPRHEEIYRPMATANRLRRPLHGRPNVHRYDEFPAGYSLVGCAPAEPASASPAGAHPDAEEGRCTIEKQRTANRLLTGCLTAGDNFNSSLRSE
Ga0210384_103236803	3300021432	Soil	MSFPRHEEIYRPMATANRLRRPLHGRPNVHRYDEFPAGYSLVGCAPAEPASASPAGAHPDAEEGRCTIEKQRTANRLLTGCLTAGDNFSCLSEYCL
Ga0210390_102272001	3300021474	Soil	MSFPRHEEIYRPMATANRLRRPLHGRPNVHRYDEFPAGYSLVGCAPAEPASASPAGAHPDAEEGRCTIEKQRTANRLLTGCLTAGDNFNLSSIWPH
Ga0187846_100729283	3300021476	Biofilm	MSFLRHGEIYRPMSSRGRTPRQPERDRLGAHRYDEFPAGYSLAGCAPAEPASASPAGAHRETEARGSTIEKQRTANYLLTACLTLGDNP
Ga0210398_102129213	3300021477	Soil	MSFPRHEEIYRPMATANRLRRPLHGRPNVHRYDEFPAGYSLVGCAPAEPASASPAGAHPDAEEGRCTIEKQRTANRLLTGCLTAGDNFRGH
Ga0210398_102149511	3300021477	Soil	MSFLRHGEIYRPMQKRERPANDRPRPHRYDEFPAGYSLAGCAPAEPTSASPAAVHTAAKTLGSTIKMQRTANHLLTACLTQGDNLKP
Ga0210398_113929682	3300021477	Soil	VQIAGNGLSGVGECAMSFPRHEEIYRPMATAKRLRRPLHGRPNVHRYNEFPAGYSLAGCSPAEPASASPAGAHPAAEQGRCTIEKQRTAKRLLTVCLTAGDNFKSLL
Ga0210410_103858282	3300021479	Soil	MSFSRHEEIYHPIAKANRLGRPTHGHPSAHRYDEFPAGYSLAGCAPAEPASASPAGAHGAGFGSSTTIDLQRMVNSLLIACLIQGDNPREILRFA
Ga0210409_1001452510	3300021559	Soil	MSFSRHEEIYHPIAKANRLGRPTHGHPSAHRYDEFPAGYSLAGCAPAEPASASPAGAHGAGFGSSTTIDLQRMVNSLLIACLIQGDNPRSSSSHKLSFHNA
Ga0224545_10087781	3300022881	Soil	MSFFRHEEIYRPMDNRNVPGRPWHHRPRPPRYDEFPAGYSSAGCAPAEPASASPAEAHLAGIGPSSTIDLQRTVNCLLTPCL
Ga0224561_10110922	3300023030	Soil	MSFFRHEEIYRPMDSKNVPGRSWHDRHRPHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGFGSSSTIGLQRTGNRLLTPCLTQGDNPSFILFKD
Ga0224551_10634612	3300023259	Soil	MSFFRHEEIYRPMDNRNVPGRPWHHRPRPPRYDEFPAGYSSAGCAPAEPASASPAEAHLAGIGPSSTIDLQRTVNRLLTPCLTQGDNPTKHRPG
Ga0228598_10860532	3300024227	Rhizosphere	MSFPRHEEIYRPIGTANRLRRPLHGRPNVHRYDEFPAGYSLVGCAPAEPASASPAGAHPDAEEGRCTIEKQRTANRLLTGCLTAGDNFKSLFDLT
Ga0247678_10325282	3300024325	Soil	MSFLRHGEIYRPMQKRERPAHDRPQPHRYDEFPAGYSLAGCAPAEPASASPAVAHSAGNALGSTIKKQRTANHLLTMCLTQGDNLR
Ga0209171_100060489	3300025320	Iron-Sulfur Acid Spring	MSFLRHGEIYRPMQKRERPAHDRPQPHRYDEFPADYSLAGCAPAEPAAASPAVAHSAGNALGSTIKKQRTANHLLTACLTQGDNLKLILR
Ga0209648_101468831	3300026551	Grasslands Soil	MSFPRHEEIYHPIGTANRLGRPSCGHPSAHRYDEFPAGYSLAGCAPAEPASASPAGAHRAAEALGSTMEKQRTANSLLTACLTQGDNCKGHL
Ga0208603_10094541	3300027109	Forest Soil	MSFPRHEEIYRPMGMAKRLGRPTCGHPSAHRYDEFPAGYSLVGCAPAEPASASPAGAHGAPEASSSTIEIQRTANYLLTACLTRGDNPKSLFLLLGLNQGEIPRFARNDKIK
Ga0209118_10255901	3300027674	Forest Soil	MSFPRHGEIYRPMATANRLRRPLHGRPNVHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGFGSSSTIKLQRTVNRLLTQCLTQGDNHNLLAQPKYI
Ga0209274_100291661	3300027853	Soil	MSFLRHGEIYRPMQKRERPAHDRPRPHRYDEFPAGYSLTGCAPAEPASASPAAVHSAAKTLGSTIKMQRTANHLLTACLTQGDNLKVL
Ga0209693_100136915	3300027855	Soil	MSFLRHGEIYRPMQKRERPANDRPRPHRYDEFPAGYSLAGCAPAEPTSASPAAVHTATKTLGSTIKMQRTANHLLTACLTQGDNLKH
Ga0209166_101066893	3300027857	Surface Soil	MSFLRHGEIYRPMQKRERPAHDRPQPHRYDEFPAGYSLAGCAPAEPASASPAVAHSAGNALGSTIKKQRTANHLLTMCLTQGDNLRDFT
Ga0209167_100868011	3300027867	Surface Soil	MSFLRDGEIYRPIQKRERPAKDRPQSHRYDEFPAGYSLAGCAPAEPASASPAVAHSAGNALGSTIKMQRTANHLLTACLTQGDNLNPTPR
Ga0209380_100366042	3300027889	Soil	MSFPRHEEIYRPMATANRLRRPLHGRPNVHRYDEFPAGYSLVGCAPAEPASASPAGAHPDAEEGRCTIEKQRTANRLLTGCLTAGDNFNLSFPESKPKRDSSLRSE
Ga0209006_101578931	3300027908	Forest Soil	MSFPRHGEIYRPMETANRLGRPSCGHPSAHRYDEFPAGYSLTGCAPAEPVSASPAGAHGAAEAGSSTIEKPRTANRLLTVCLTQGDNPSSSLRSE
Ga0209698_102040553	3300027911	Watersheds	MSFPRHGEIYRPMRTANRLGRPSCGHPSAHRYDEFPAGYSLAGCAPAEPASASPAGAHGAAEAGSSTIEKQRTTNRLLTACLTLGDNPIFASLRMTKQDILSAA
Ga0209069_103805801	3300027915	Watersheds	MSFSRHEEIYHPIAKANRLGRPTHGHPSAHRYDEFPAGYSLAGCAPAEPASASPAGAHGAGFGSSTTIDLQRTVNSLLIACLIQGDN
Ga0209062_10177284	3300027965	Surface Soil	MSFLRHGEIYRPISSESKPGQPYLDRPGPHRYDEFPAGYSLAGCAPAEPASASPAEAHREAGRSGGTIEKQRTVGSVLTACLTQRDNPSGRQD
Ga0265351_10238211	3300028020	Soil	MSFPRHEEIYRPMATANRLRRPLHGRPNVHRYDEFPAGYSLVGCAPAEPASASPAGAHPDAEEGRCTIEKQRTANRLLTGCLT
Ga0265357_10021501	3300028023	Rhizosphere	MSFPRHEEIYRPMATANRLRRPLHGRPNVHRYDEFPAGYSLVGCAPAEPASASPAGAHPDAEEGRCTIEKQRTANRLLTGCLTAGDNFNSSL
Ga0137415_100347385	3300028536	Vadose Zone Soil	MSFPRHEEIYRPIRTANRLGRPTCGHPSAHRYDEFPAGYSLAGCAPAEPTSASPAGAYRAGFGSISTIELQRTVRCLLTPCLTQGDNPRFLASLGMKI
Ga0265326_101355953	3300028558	Rhizosphere	MSFFRHEEIYRPMDVRIVPGRPAQDRPRPHRYDEFPAGYSSAGCAPAKPASASPAEAHLAGIGPGSTIDLQRTANRLLTPCLTQ
Ga0222749_100364601	3300029636	Soil	MSFSRHEEIYHPIAKANRLGRPTHGHPSAHRYDEFPAGYSLAGCAPAEPASASPAGAHGAGFGSSTTIDLQRTVNSLLIACLIQGDNPNSSLRSE
Ga0311338_119150771	3300030007	Palsa	MSFFRHEEIYRPMDVENVPGRPAQDRPRPHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGIGPSSTIDLQRTANRLLTPCLTQGDKPNAQVLLDPFEEQFHLPAA
Ga0265753_10016831	3300030862	Soil	MSFPRHEEIYRPMATANRLRRPLHGRPNVHRYDEFPAGYSLVGCAPAEPASASPAGAHPDAEEGRCTIEKQRTANRLLTGCLTAGDNFRGHSG
Ga0170834_1115718203	3300031057	Forest Soil	MSFPRHGEIYRPMGTANRLGRPSCGHPSAHRYDEFPAGYSLTGCAPAEPVSASPAGAHGAAEAGSSTIEKQRTANRLLTVCLTQGDNPNSSLRSE
Ga0170823_113693744	3300031128	Forest Soil	MSFPRHGEIYRPMGTANRLGRPSCGHPSAHRYDEFPAGYSLTGCAPAEPVSASPAGAHGAAEAGSSTIEKQRTANRLLTACLTQGDNPNSSLRS
Ga0170824_1049457454	3300031231	Forest Soil	MSFPRHGEIYRPMGTANRLGRPNCGHPSAHRYDEFPAGYSLTGCAPAEPVSASPAGAHGAAEAGSSTIEKQRTANRLLTVCLTQGDNPNSSLRSE
Ga0265330_102644431	3300031235	Rhizosphere	MSFFRHEEIYRPMDVRIVPGRPAQDRPRPHRYDEFPAGYSSAGCAPAEPTSASPAGDHDTLAGAGAKQQLSERQVS
Ga0265325_100848431	3300031241	Rhizosphere	MSFFRHEEIYRPMDVRIVPGRPAQDRPRPHRYDEFPAGYSSAGCAPAKPASASPAEAHLAGIGPGSTIDLQRTANRLLTPCLTQGDKP
Ga0307374_105318061	3300031670	Soil	MSFFRHGEIYRPMESRIVPGRSWHDRPRPHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGFGSSSTIDLQRTVNRLLTPCLTQGDNPILALTSLRLVTH
Ga0310686_1014327282	3300031708	Soil	MSFPRHEEIYRPMATANRLRRPLHGRPNVHRYDEFPAGYSLVGCAPAEPASASPAGAHPDAEEGRCTIEKQRTANRLLTGCLTAGDNFKSLTLFIRLNRREIPRSARNDKINCFL
Ga0310686_1073590963	3300031708	Soil	MSFFRHEEIYRPMDSKNVPGRSWHDRHRPHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGFGSSSTIGLQRTGNRLLTPCLTQGDNP
Ga0265314_102279241	3300031711	Rhizosphere	MSFFRHEEIYRPMDVRSVPGRPAHDRPRPHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGFGSSSTIDLQRTANRLLTPCLTQGDKPIPHCAVKVFILHILIHSE
Ga0307473_100134315	3300031820	Hardwood Forest Soil	MSFFRHGEIYRPMNHRNEPGRSWHDRLRPHRYDEFPTGYSSAGCAPAEPASASPAEAHLAGFGSISTIELQRTVESLLTPCLTQGDNPNSSLRSE
Ga0307479_101764391	3300031962	Hardwood Forest Soil	MSFFRQEEIYRPMDSKNVPGRPWHNRPRHHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGFGSGCTIKLQRTANCLLTPCLTQGDNPTPYLC
Ga0311301_111262031	3300032160	Peatlands Soil	MSFFRHEEIYRPMDNRKVPGRPWHDLPQLHRYDEFPAGYSSAGCAPAEPASASPAGAHLAGFGSGSTIELQRTVNRLLAPC
Ga0307471_1024481421	3300032180	Hardwood Forest Soil	MSFFRHEEIYRPMDSRNVPGRPWHDRPRPHRFDEFPAGYSSAGCAPAEPASASPAEAHLAGFGSGSTIELQRTVNRLLTPCLTQGDNPKYNAMLMYDSASWTHAGTTGW
Ga0307472_1000442494	3300032205	Hardwood Forest Soil	MSFFRHGEIYRPMNHRNEPGRSWHDRLRPHRYDEFPTGYSSAGCAPAEPASASPAEAHLAGFGSISTIVSQRTANCLLTPCLTQGDNPNLSLI
Ga0335079_112157751	3300032783	Soil	MSFLRHEEIYRPMSSVPGRPYPDRPQPHRFDEFPAGYSLAGCAPALPASASPAEAHREAGRSGSTIEKQRTVGSVLTACLTQGD
Ga0335081_116286831	3300032892	Soil	MSFLRHEEIYRPMDSVPGRPYPDRPRPHRFDEFPAGYSLAGCAPALPASASPAEAHRGARRGGCTIEKQRTVSSVLTGCLTQGDNPMLEFHP
Ga0335074_1000123425	3300032895	Soil	MSFLRDGEIYRPMPKRERPAKDRPRVHRYDEFPAGYSLAGCAPAEPACASPAGGHSAGEILGSTIKTQRTANHLLTACHIQGDNPRTFQMARKD
Ga0335074_103947231	3300032895	Soil	MSFLRHGEIYRPMKKREQPAKDRPRVHRYDEFPAGYSLAGCAPAEPASASPADVHSAGNALGSTIKMQRAANHLLTACLTQRDKP
Ga0370484_0028135_1008_1325	3300034125	Untreated Peat Soil	MSFFRHGEIYRPMDNRNVPGRPSHDRPRPHRYDEFPAGYSSAGCAPAEPASASPAEAHLAGFGQGSTIELQRTVNRLLTPCLTQGDNPSHLFVKSPHKSFIRLRCC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087852

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences