Metagenome / Metatranscriptome Family F087837

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087837
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	124 residues
Representative Sequence	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEERPRMLPRTVVVRGQADHPLRLSVPEGLPLRWEIWSEQKIADGEGASPVLHLPQGLPHGVFRLHVRVAAPAGP
Number of Associated Samples	104
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	81.82 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.909 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (32.727 % of family members)
Environment Ontology (ENVO)	Unclassified (36.364 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.818 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.38% β-sheet: 28.21% Coil/Unstructured: 56.41%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF11896	GlgE_dom_N_S	42.73
PF00128	Alpha-amylase	2.73
PF16657	Malt_amylase_C	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	2.73
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	2.73
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	2.73
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	2.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
All Organisms	root	All Organisms	49.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
cellular organisms	root	All Organisms → cellular organisms	49.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	49.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	45.45 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	10.91 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.18 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.36 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.91 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	8.18 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.64 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.82 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.91 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.91 %
Maritimibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter	8.18 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.82 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.82 %
Granulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Granulibacter	0.91 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.91 %
Maritimibacter alkaliphilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → Maritimibacter alkaliphilus	8.18 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.82 %
Granulibacter bethesdensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Granulibacter → Granulibacter bethesdensis	0.91 %
unclassified Acidovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.91 %
Maritimibacter alkaliphilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → Maritimibacter alkaliphilus	8.18 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.82 %
Acidovorax sp. CF316	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax → Acidovorax sp. CF316	0.91 %
Granulibacter bethesdensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Granulibacter → Granulibacter bethesdensis	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY01D7AOC	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Granulibacter → Granulibacter bethesdensis	526	Open in IMG/M
3300001989\|JGI24739J22299_10263020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → Maritimibacter alkaliphilus	505	Open in IMG/M
3300004480\|Ga0062592_101672538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → Maritimibacter alkaliphilus	618	Open in IMG/M
3300005146\|Ga0066817_1022486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → Maritimibacter alkaliphilus	588	Open in IMG/M
3300005148\|Ga0066819_1006500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	756	Open in IMG/M
3300005158\|Ga0066816_1026853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → Maritimibacter alkaliphilus	511	Open in IMG/M
3300005163\|Ga0066823_10034419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300005169\|Ga0066810_10132165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax → Acidovorax sp. CF316	582	Open in IMG/M
3300005173\|Ga0066822_1018862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → Maritimibacter alkaliphilus	510	Open in IMG/M
3300005330\|Ga0070690_100792009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	735	Open in IMG/M
3300005341\|Ga0070691_10170025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1129	Open in IMG/M
3300005355\|Ga0070671_101448605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → Maritimibacter alkaliphilus	607	Open in IMG/M
3300005356\|Ga0070674_101812399	Not Available	553	Open in IMG/M
3300005434\|Ga0070709_11291624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → Maritimibacter alkaliphilus	588	Open in IMG/M
3300005456\|Ga0070678_101134900	Not Available	723	Open in IMG/M
3300005457\|Ga0070662_100545911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	971	Open in IMG/M
3300005545\|Ga0070695_101641673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → Maritimibacter alkaliphilus	537	Open in IMG/M
3300005548\|Ga0070665_100084238	All Organisms → cellular organisms → Bacteria → Proteobacteria	3184	Open in IMG/M
3300005614\|Ga0068856_100011211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8700	Open in IMG/M
3300005615\|Ga0070702_100309751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1096	Open in IMG/M
3300006163\|Ga0070715_10030636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2176	Open in IMG/M
3300006175\|Ga0070712_100635390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	906	Open in IMG/M
3300006604\|Ga0074060_11032869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → Maritimibacter alkaliphilus	534	Open in IMG/M
3300006904\|Ga0075424_100047751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4466	Open in IMG/M
3300006953\|Ga0074063_10087376	All Organisms → cellular organisms → Bacteria → Proteobacteria	1955	Open in IMG/M
3300009011\|Ga0105251_10510755	Not Available	562	Open in IMG/M
3300009036\|Ga0105244_10154688	Not Available	1097	Open in IMG/M
3300009098\|Ga0105245_10081954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2950	Open in IMG/M
3300009148\|Ga0105243_12112036	Not Available	599	Open in IMG/M
3300009551\|Ga0105238_11898822	Not Available	628	Open in IMG/M
3300010036\|Ga0126305_10645975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	713	Open in IMG/M
3300010166\|Ga0126306_10830870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	746	Open in IMG/M
3300010375\|Ga0105239_10122209	Not Available	2893	Open in IMG/M
3300010399\|Ga0134127_11259704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	808	Open in IMG/M
3300010400\|Ga0134122_11604180	Not Available	675	Open in IMG/M
3300010403\|Ga0134123_10451116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1195	Open in IMG/M
3300011119\|Ga0105246_12558345	Not Available	503	Open in IMG/M
3300012469\|Ga0150984_106587496	Not Available	637	Open in IMG/M
3300012489\|Ga0157349_1031912	Not Available	554	Open in IMG/M
3300012882\|Ga0157304_1018624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	861	Open in IMG/M
3300012902\|Ga0157291_10170763	Not Available	664	Open in IMG/M
3300012910\|Ga0157308_10224117	Not Available	648	Open in IMG/M
3300012911\|Ga0157301_10232671	Not Available	638	Open in IMG/M
3300012958\|Ga0164299_10818917	Not Available	666	Open in IMG/M
3300012961\|Ga0164302_11518289	Not Available	553	Open in IMG/M
3300012984\|Ga0164309_11685144	Not Available	544	Open in IMG/M
3300012985\|Ga0164308_10894703	Not Available	782	Open in IMG/M
3300012988\|Ga0164306_10428560	Not Available	1001	Open in IMG/M
3300013297\|Ga0157378_10468357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1253	Open in IMG/M
3300013297\|Ga0157378_13168283	Not Available	511	Open in IMG/M
3300014326\|Ga0157380_11434655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	742	Open in IMG/M
3300014969\|Ga0157376_11804294	Not Available	648	Open in IMG/M
3300015077\|Ga0173483_10868725	Not Available	528	Open in IMG/M
3300015374\|Ga0132255_102247634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	832	Open in IMG/M
3300017792\|Ga0163161_10012671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5855	Open in IMG/M
3300017792\|Ga0163161_11146479	Not Available	670	Open in IMG/M
3300018054\|Ga0184621_10233691	Not Available	657	Open in IMG/M
3300018067\|Ga0184611_1005648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3257	Open in IMG/M
3300018074\|Ga0184640_10158589	Not Available	1012	Open in IMG/M
3300018076\|Ga0184609_10021951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2539	Open in IMG/M
3300019869\|Ga0193705_1025334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1284	Open in IMG/M
3300019886\|Ga0193727_1058838	Not Available	1218	Open in IMG/M
3300020005\|Ga0193697_1017227	Not Available	1778	Open in IMG/M
3300021078\|Ga0210381_10199001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	698	Open in IMG/M
3300021080\|Ga0210382_10336477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	666	Open in IMG/M
3300021082\|Ga0210380_10263642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300022756\|Ga0222622_10641743	Not Available	769	Open in IMG/M
3300024055\|Ga0247794_10029971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1405	Open in IMG/M
3300025903\|Ga0207680_10470603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	893	Open in IMG/M
3300025905\|Ga0207685_10027750	Not Available	1985	Open in IMG/M
3300025927\|Ga0207687_11806008	Not Available	523	Open in IMG/M
3300025928\|Ga0207700_10917422	Not Available	784	Open in IMG/M
3300025941\|Ga0207711_11493306	Not Available	619	Open in IMG/M
3300025986\|Ga0207658_11036215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749	Open in IMG/M
3300026095\|Ga0207676_10444852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1220	Open in IMG/M
3300026855\|Ga0208404_1003523	Not Available	621	Open in IMG/M
3300027480\|Ga0208993_1064937	Not Available	663	Open in IMG/M
3300027616\|Ga0209106_1005668	Not Available	2503	Open in IMG/M
3300028379\|Ga0268266_12189575	Not Available	525	Open in IMG/M
3300028707\|Ga0307291_1132496	Not Available	630	Open in IMG/M
3300028720\|Ga0307317_10100385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	959	Open in IMG/M
3300028722\|Ga0307319_10021632	All Organisms → cellular organisms → Bacteria → Proteobacteria	1972	Open in IMG/M
3300028722\|Ga0307319_10215298	Not Available	630	Open in IMG/M
3300028768\|Ga0307280_10151990	Not Available	800	Open in IMG/M
3300028778\|Ga0307288_10164980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	840	Open in IMG/M
3300028782\|Ga0307306_10013899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1755	Open in IMG/M
3300028796\|Ga0307287_10389941	Not Available	524	Open in IMG/M
3300028809\|Ga0247824_10659007	Not Available	634	Open in IMG/M
3300028819\|Ga0307296_10801763	Not Available	513	Open in IMG/M
3300028824\|Ga0307310_10399690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	682	Open in IMG/M
3300028824\|Ga0307310_10519679	Not Available	601	Open in IMG/M
3300028824\|Ga0307310_10734865	Not Available	507	Open in IMG/M
3300028828\|Ga0307312_10540517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	770	Open in IMG/M
3300028875\|Ga0307289_10020675	Not Available	2545	Open in IMG/M
3300028885\|Ga0307304_10254679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	765	Open in IMG/M
3300028885\|Ga0307304_10445487	Not Available	589	Open in IMG/M
3300030904\|Ga0308198_1052668	Not Available	634	Open in IMG/M
3300030905\|Ga0308200_1138174	Not Available	553	Open in IMG/M
3300030988\|Ga0308183_1112224	Not Available	634	Open in IMG/M
3300031094\|Ga0308199_1008390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1500	Open in IMG/M
3300031226\|Ga0307497_10030141	Not Available	1761	Open in IMG/M
3300031366\|Ga0307506_10262628	Not Available	661	Open in IMG/M
3300031421\|Ga0308194_10056903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1018	Open in IMG/M
3300031847\|Ga0310907_10621901	Not Available	590	Open in IMG/M
3300031854\|Ga0310904_10828374	Not Available	649	Open in IMG/M
3300031908\|Ga0310900_10849700	Not Available	741	Open in IMG/M
3300032075\|Ga0310890_10147194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1552	Open in IMG/M
3300032211\|Ga0310896_10440117	Not Available	704	Open in IMG/M
3300033550\|Ga0247829_11298482	Not Available	602	Open in IMG/M
3300034690\|Ga0364923_0085945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	778	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.64%
Host-Associated	Host-Associated	26.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.36%
Plants	Host-Associated → Plants	26.36%
Aquatic	Environmental → Aquatic	7.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.36%
Sediment	Environmental → Aquatic → Sediment	4.55%
Freshwater	Environmental → Aquatic → Freshwater	2.73%
Floodplain	Environmental → Terrestrial → Floodplain	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.73%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.55%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.27%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.55%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	32.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.64%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.73%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.91%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300001989	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005158	Soil and rhizosphere microbial communities from Laval, Canada - mgHAA	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005173	Soil and rhizosphere microbial communities from Laval, Canada - mgHMA	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026855	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA (SPAdes)	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_02385420	2170459010	Grass Soil	MNDILERAARYGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEEPTQLLPRTVVVRGQDGRLLHLAVPEGVSLRWEIWSEQRIAHGEGNSPVLHLPQDLPHGVFRLDVTAAAPAGVLTDTACLVVCPHRAYQGGEKAPQRMWALA
JGI24739J22299_102630201	3300001989	Corn Rhizosphere	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKITDGEGVSPVLHLPQGL
Ga0062592_1016725381	3300004480	Soil	MSDILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQTDRVVRLAVPEGLPLRWEIYSQEKLAGGEGLSPVLNLPGTLPDGVFRLHVTVATPAAASSDAACLIVCPQCAFQGGEN
Ga0066817_10224861	3300005146	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKITDGEGVSPVLHLPQGLP
Ga0066819_10065001	3300005148	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKITDGECVSPVLHLPQGLP
Ga0066816_10268531	3300005158	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEERPRVLPRTVVVRGQADLPLHLSVPEGLPLWWEIWSEQKITDGEGVSPVLHLPQGLPQGVFRLHVRVTAPAGPLTNVACLVVCPD
Ga0066823_100344192	3300005163	Soil	MNDILERAARCGLETEYRDAFGHLQSVEPEVLARLLDLLATGGEQPTQLLPRTVVVRGQDGCVLHLALPEGVPLRWEIWSDQRIAHGEGSSPALHLPQGLPHGVFRLHVTAAAPAGALTDTA
Ga0066810_101321651	3300005169	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEERPRVLPRTVVVRGQADLPLHLSVPEGLPLWWEIWSEQKIAEGEGASPVLHLPQGLPHGVFRLHVRVAAPAGPLTNTACLVVCPDRAFQGGETAPPRMWALAV
Ga0066822_10188621	3300005173	Soil	MSDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKITDGEGVSPVLHLPQGL
Ga0070690_1007920091	3300005330	Switchgrass Rhizosphere	MNDILERAARRGLETEYRDAFGQLRSVEPEVLARLLDSLAVGGKERSGMLPRTVVVRGPANRPLHLSVPEGLPLRWEIWSEQKIAGGEGISPVLNLPQGL
Ga0070691_101700252	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKITDGEGVSPVLHLPQGLPHGVFRLHVRVA
Ga0070671_1014486051	3300005355	Switchgrass Rhizosphere	MSDILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWDIYSQEKLAGGEGLSPVLNLPGTLPNGVFRLHVTVATPAAPSSDAACLIVCPQCAFQ
Ga0070674_1018123992	3300005356	Miscanthus Rhizosphere	MSDILERAARVGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWDIYSQEKLAGGEGLSPVLNLPATLPNGVFRLHVTVATPAAPSSDAACLIVCPQC
Ga0070709_112916241	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSHILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWEIYSQEKLAGGEGLSPVLNLPATLPNGVFRLHVTVATQAAPSSDAACLIVCPQCAF
Ga0070678_1011349002	3300005456	Miscanthus Rhizosphere	MNDILERAARCGLETEYRDAFGQLRSVEPEVLARLLDSLAVGGKERSGMLPRTVVVRGPANRPLHLSVPEGLPLRWEIWSEQKIAGGEGISPVLNLPQGLPHGIFRLHVRVAAPAGPLTDITCLAVCPDRAYQGGETAPPRMWALAVQLYG
Ga0070662_1005459112	3300005457	Corn Rhizosphere	MSDILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWEIYSQEKLAGGEGLSPVLNLPATLPNGVFRLHVTVATQAAPSSDAACLIVCPQCAFQGGEKSPPRVWALAVQLYGVRSS
Ga0070695_1016416731	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKITDGEGVSPVLHLPQGLPQGVFRLHVRVTAPAGPLTNVACLVVCP
Ga0070665_1000842381	3300005548	Switchgrass Rhizosphere	MNDILERAARCGLETEYRDAFGQLQSVDPEVLARLLDSLAVGGVEPPRILPRTVVMRGQADLPLHLGVPEGFPLWWEIWSEHKIADGEGVSPVLHLPKGLPQGVFRLHVRIADPAGPLTNTACLVVCPDRAYQ
Ga0068856_1000112116	3300005614	Corn Rhizosphere	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKITDGEGVSPVLHLPQGLP
Ga0070702_1003097511	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MNDILERAARRGLETEYRDAFGQLRSVEPEVLARLLDSLAVGGKERSGMLPRTVVVRGPANRPLHLSVPEGLPLRWEIWSEQKIAGGEGISPVLNLPQGLPHGIFRLHVRVAAPAGPLT
Ga0070715_100306362	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKITDGEGVSPVLHLPQGLPQGVFRLHVRVTAPAGPLTNVACLV
Ga0070712_1006353901	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSHILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWEIYSQEKLAGGEGLSPVLNLPGTLPNGVFRLHVTVATPAAPSSDAACLIVCPQCAFQGGERSPP
Ga0074060_110328691	3300006604	Soil	MNDILERAARCGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEQPTQLLPRTVVVRGQDGCVLHLALPEGVPLRWEIWSDQRIAHGEGSSPALHLPQGLPHGVFRLHVTAAAPAGALTDTACLVVCPHRAYQ
Ga0075424_1000477513	3300006904	Populus Rhizosphere	MSDILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWDIYSQEKLAGGEGLSPVLNLPATLPNGVFRLHVTVATPAAPSSDAACLIVCPQCAFQGGEKSPPR
Ga0074063_100873762	3300006953	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEERPRVLPRTVVVRGQADLPLHLSVPEGLPLWWEIWSEQKIAEGEGASPVLHLPQGLPHGVFRLHV
Ga0105251_105107551	3300009011	Switchgrass Rhizosphere	MSDILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWEIYSQEKLAGGEGLSPVLNLPATLPNGVFRLHVTVATQAAPSSDAACLIVCPQCAFQGGEKSPPRVWALAVQL
Ga0105244_101546881	3300009036	Miscanthus Rhizosphere	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKITDGEGVSPVLHLPQGLPQGVFRLHVRVTAPAGPLTNVACLVVCPDRAYQGGETALPRM
Ga0105245_100819541	3300009098	Miscanthus Rhizosphere	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKITDGEGVSPVLHLPQGLPQGVFRLHVRVTAPAGPLTNVACLVVCPD
Ga0105243_121120361	3300009148	Miscanthus Rhizosphere	MPIMNDILERAARCGLETEYRDAFGQLRSVEPEVLVRLLDSLAVGGEERSGMLPRTVVVRGQANRRLYLRVPEGLPLRWEIWSEQKIADGEGVSPVLDLPQGLPHGIFRLYVRIAAPAGPLTDITCLAVCPDRAYQGGETAPPRMWALAVQLYGVRS
Ga0105238_118988221	3300009551	Corn Rhizosphere	MNDILERAARCGLETEYRDAFGQLQSVDPEVLARLLDSLAVGGVEPPRILPRTVVMRGQADLPLHLGVPEGFPLWWEIWSEHKIADGEGVSPVLHLPKGLPQGVFRLHVRIADPAGPLTNTACLVVCPDRAYQGGETAPPRMWALAVQL
Ga0126305_106459751	3300010036	Serpentine Soil	MNDILERAARCGLETEYRDAFGQLRSVEPEVLARLLNSLAVGGEEPPRMLPRTVVLRGQADRLLHLSVPEGLPLWWEIRSEQKIADGEGVSPVLHLPQGL
Ga0126306_108308702	3300010166	Serpentine Soil	MNDILERAARCGLETEYRDAFGQLRSVEPEVLARLLNSLAVGGEEPPRMLPRTVVLRGQADRLLHLSVPEGLPLWWEIRSEQKIADGEGVSPVLHLPQGLPHGVFRL
Ga0105239_101222093	3300010375	Corn Rhizosphere	MSDILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWDIYSQEKLAGGEGLSPVLNLPATLPNGVFRLHVTVA
Ga0134127_112597042	3300010399	Terrestrial Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKIADGEGVSPVLHLPQGLPHGVFRLHVRVAAPAGPLSNAACLVVCPDRAYQG
Ga0134122_116041802	3300010400	Terrestrial Soil	MSDILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWDIYSQEKLAGGEGLSPVLNLPATLPNGVFRLHVTVAT
Ga0134123_104511161	3300010403	Terrestrial Soil	MSDILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWEIYSQEKLAGGEGLSPVLNLPATLPNGVFRLH
Ga0105246_125583451	3300011119	Miscanthus Rhizosphere	MNDILERAARCGLETEYRDAFGQLQSVDPEVLARLLDSLAVGGVEPPRILPRTVVMRGQADLPLHLNVPEGLPLWWEIWSEQKIAEGAGVSPVLHLPKGLPQGVFRLH
Ga0150984_1065874961	3300012469	Avena Fatua Rhizosphere	MNDIVERAARCGLETEFRDAFGQVQSVDPEVLARLLDSLAIGGEERPRMLPRTVVVRGQADHPLRLNVPEGLPLRWEMWAEQKIADGEGPSPVLLLPKGLPHGVFRLHVRVAAPAGPLSDDACLV
Ga0157349_10319121	3300012489	Unplanted Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEERPRMLPRTVVVRGQADHLLRLSVPEGLPLRWEIWSEQKIAGGEGISPVLNLPQGLPHGIFRLHVRVAAPAG
Ga0157304_10186242	3300012882	Soil	MSDILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWEIYSQEKLAGGEGLSPLLNLPGTLPNGVFRL
Ga0157291_101707631	3300012902	Soil	MSDILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWDIYSQEKLAGGEGLSPVLNLPATLPNGVFRLHVTVATPAAPSSDAACLIVCPQCAFQGGEKSPPRMWALAVQLYGV
Ga0157308_102241171	3300012910	Soil	MSDILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQTDRVVRLAVPEGLPLRWEIYSQEKLAGGEGLSPVLNLPGTLPDGVFRLHVTVATQAAPSSDAAC
Ga0157301_102326711	3300012911	Soil	MPIMNDILERAARCGLETEYRDAFGQLRSVEPEVLARLLDSLAVGGKERSGMLPRTVVVRGQADLPLHLSVPEGLPLWWEIWSEQKITDGEGVSPVLHLPQGLPQGVFRLHVRVTAPAGPLTNVACLVV
Ga0164299_108189171	3300012958	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEERPRMLPRTVVVRGQADHLLRLSVPEGLPLRWEIWSEQKIAGGEGASPVLHLPQGLPHGVFRLHVRVAAPAGPLTNVACLVVCPDRAY
Ga0164302_115182891	3300012961	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEERPRMLPRTVVVRGQADHPLRLSVPEGLPLRWEIWSEQKIADGEGASPVLHLPQGLPHGVFRLHVRVAAPAGP
Ga0164309_116851441	3300012984	Soil	MNDIVQRAARCGLETEYRDAFGRLQSVEPEVLARLIHSLAAGEEGPARLLPRTVVVRGQAHSPLHLAVPESLPLRWEIWSEQKIAGGEVMSPVLHLPHDLPHGIFRLHVTVAAPA
Ga0164308_108947031	3300012985	Soil	MSHILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWEIYSQEKLAGGEGLSPVLNLPGTLPNGVFRLHVTVATPAAPSSDAACLIVCPQCAFQGGEKSPPRMWALAVQLYGVR
Ga0164306_104285601	3300012988	Soil	MSHILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWDIYSQEKLAGGEGLSPVLNLPATLPNGVFRLH
Ga0157378_104683572	3300013297	Miscanthus Rhizosphere	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKITDGEGVSPVLHLPQGLPQGV
Ga0157378_131682831	3300013297	Miscanthus Rhizosphere	MPIMNDILERAARCGLETEYRDAFGQLRSVEPEVLARLLDSLAVGGKERSGMLPRTVVVRGPANRPLHLSVPEGLPLRWEMWAEQKIADGEGASPVLLLPKGVPHGVFRLHVRVAAPAGPLTN
Ga0157380_114346551	3300014326	Switchgrass Rhizosphere	MPIMNDILERAARRGLETEYRDAFGQLRSVEPEVLARLLDSLAVGGKERSGMLPQTVVVRGPANRPLHLSVPEGLPLRWEIWSEQKIAGGEGISPVLNLPQ
Ga0157376_118042941	3300014969	Miscanthus Rhizosphere	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEERPRVLPRTVVVRGQADLPLHLNVPEGLPLWWEIWSEQKIADGEGVSPVLHLPKGLPQGVFRLHVRIA
Ga0173483_108687251	3300015077	Soil	MSDILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWEIYSQEKLAGGEGLSPVLNLPATL
Ga0132255_1022476341	3300015374	Arabidopsis Rhizosphere	MNDILERAARCGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEEPTQLLPRTVVVRGQDGCVLRLAIPEGVPLRWEIWSEQRIAQGEGSSPVLHLPQGLPHGVFRLHVAAAAPAGAVTDTACLVVCPYRAYQG
Ga0163161_100126711	3300017792	Switchgrass Rhizosphere	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKIADGEDVSPVLHLPQGLPHGVFRLHVRVAAPAGPLTNVACLVVCPDRAYQGGETALPRMWA
Ga0163161_111464791	3300017792	Switchgrass Rhizosphere	MNDIVERAARCGLETEFRDAFGQVQSVDPEVLARLLDSLAIGGEERPRMLPRTVVVRGQADHPLRLNVPEGLPLRWEMWAEQKIADGEGASPVLLLPKGLPHGVFRLHVRVAAPAGPLSDDACLVVCPDRAYQGGETAPQRMWALAVQLH
Ga0184621_102336911	3300018054	Groundwater Sediment	MNDILERAARYGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEEPTQLLPRTVVVRGQDGRLLHLAVPEGVSLRWEIWSEQRIAHGEGSSPVLHLPQGLPHGVFRLHVAAAAPAGAVTDTACLVVCPHRA
Ga0184611_10056481	3300018067	Groundwater Sediment	MNDILERAARWGLETAYRDAFGHLQSVEPEVLARLLDSLATGAGEPTQLLPRTVVVRGQDGCVLHLAIPEGVPLRWEIWSDQSIAHGEGSSPVLHLPQGLPHGVFRLHVT
Ga0184640_101585892	3300018074	Groundwater Sediment	MNDILERAARYGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEEPTQLLPRTVVVRGQDGRLLHLAVPEGVSLRWEIWSEQRIAHGEGNSPVLHLPQDLPHGVFRLHVTAAAPA
Ga0184609_100219513	3300018076	Groundwater Sediment	MNDILERAARYGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEEPTQLLPRTVVVRGQDGRLLHLAVPEGVSLRWEIWSEQRIAHGEGNSPVLHLPQ
Ga0193705_10253341	3300019869	Soil	MNDILERAARYGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEEPTQLLPRTVVVRGQDGRLLHLAVPEGVSLRWEIWSEQRIAHGEGNSPVLHLPQDLPHGVFRLHVTAAAPAGVLTDTA
Ga0193727_10588381	3300019886	Soil	MNDILERAARYGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEEPTQLLPRTVVVRGQDGRLLHLAVPEGVSLRWEIWSEQRIAHGEGNSPVLHLPQDLPHGVFRLHVTAAAPAGVLTDTACLVVCPHRAYQGGEK
Ga0193697_10172271	3300020005	Soil	MNDILERAARYGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEEPTQLLPRTVVVRGQDGRLLHLAVPEGVSLRWEIWSEQRIAHGEGNSPVLHLPQDLPQ
Ga0210381_101990012	3300021078	Groundwater Sediment	MNDILERAARWGLETEYRDAFGHLQSVEPEVLARLLDSLATGAGEPTQLLPRTVVVRGQDGRVLRLALPEGVSLRWEIWSEQRIAHGEGSSPVLHLPQGLPHGVFRLHVAAAAPAGAV
Ga0210382_103364772	3300021080	Groundwater Sediment	MNDILERAARYGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEEPTQLLPRTVVVRGQDGRLLHLAVPEGVSLRWEIWSEQRIAHGEGNSPVLHLPQDLPH
Ga0210380_102636423	3300021082	Groundwater Sediment	MNDIVERAARCGLETEFRDAFGQVQSVDPEVLARLLDSLAIGGEERPRMLPRTVVVRGQADHPLRLNVPEGLPLRWEMWAEQKIADGEGASPVLLLPKGLPHGVFRLHVRVAAPAGPLSDDACLVVCPD
Ga0222622_106417431	3300022756	Groundwater Sediment	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEERPRVLPRTVVVRGQADLPLHLSVPEGLPLWWEIWSEQKIADGEDVSPVLHLPQGLPHGVFRLHVRVAAPAGPLTNVACLVVCPDCAYQGGETVPPRMWALAVQLYG
Ga0247794_100299712	3300024055	Soil	MSDILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWDIYSQEKLAGGEGLSPVLNLPATLPNGVFRLH
Ga0207680_104706031	3300025903	Switchgrass Rhizosphere	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKITDGEGVSPVLHLPQGLPQGVFRLHVRVTAPAGPLTNVACLVVCPDRA
Ga0207685_100277501	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKITDGEGVSPVLHLPQGLPQGVFRLHVRVTAPAGPLTNVACLVV
Ga0207687_118060082	3300025927	Miscanthus Rhizosphere	LRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQTDRVVRLAVPEGLPLRWEIYSQEKLAGGEGLSPVLNLPGTLPDGVFRLHVTVATPAAASSDAACLIVCRHPDVQAMRICHVRWRGLRLRAAFA
Ga0207700_109174222	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSHILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWEIYSQEKLAGGEGLSPVLNLPGTLPNGVFRLHVTVATPAAPSSDAACLIVCPQCAFQGGERSPPRMWA
Ga0207711_114933061	3300025941	Switchgrass Rhizosphere	MSDILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWEIYSQEKLAGGEGLSPVLNLPATLPNGVFRLHVTVATQAAPSSDAACLIVCPQ
Ga0207658_110362151	3300025986	Switchgrass Rhizosphere	MSDILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWDIYSQEKLAGGEGLSPVLNLPATLPNGVFRLHVTVATP
Ga0207676_104448522	3300026095	Switchgrass Rhizosphere	MSDILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWEIYSQEKLAGGEGLSPVLNLPATLP
Ga0208404_10035231	3300026855	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKITDGECVSPVLHLPQGLPHGVFRLHVRVAAPAGPLTNVAC
Ga0208993_10649371	3300027480	Forest Soil	MNDILERAARCGLETEYRDAFGHLQSVEPEVLARLLDSLAAGGEEPTRLLPRTVVVRGQADRPLHLAVPEGIPLRWEIFAERKIAEGEGTSPVLHLPQDLPHGVFRLHVTVAAPAGLLTDAACLVVCP
Ga0209106_10056681	3300027616	Forest Soil	MNDILERAARCGLETEYRDAFGHLQSVEPEVLARLLDSLAAGGEEPTRLLPRTVVVRGQADRPLHLAVPEGIPLRWEIFAERKIAEGEGTSPVLHLPQDLPHGVFRLHVTVAAPAGLLTDAACLVVCPYRAYQGGEKAP
Ga0268266_121895751	3300028379	Switchgrass Rhizosphere	MSDILERAARGGLETEYRDAFGHLRSVDTEVLARLLDSLAVEGQEPARLLPRTVVVRGQADRVVRLAVPEGLPLRWEIYSQEKLAGGEGLSPVLNLPATLPNG
Ga0307291_11324962	3300028707	Soil	MNDILERAARYGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEEPTQLLPRTVVVRGQDGRLLHLAVPEGVSLRWEIWSEQRIAHGEGNSPVLHLPQDLPHGVFRLHVTAAA
Ga0307317_101003852	3300028720	Soil	MNDILERAARWGLETEYRDAFGHLQSVEPEVLARLLDSLATGAGEPTQLLPRTVVVRGQDGRVLRLALPEGVSLRWEIWSEQRIAHGEGSSPVLHLPQGLPH
Ga0307319_100216322	3300028722	Soil	MNDILERAARYGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEEPTQLLPRTVVVRGQDGRLLHLAVPEGVSLRWEIWSEQRIAHGEGNSPVLHLPQDLPHGVFRLHVTAAAPAGVLTDTACLVVCPHRAYQGGEKAPQRMWALAVQLYGVRSSD
Ga0307319_102152981	3300028722	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKIADGEDVSPVLHLPQGLPHGVFRLHVR
Ga0307280_101519901	3300028768	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEERPRVLPRTVVVRGQADLPLHLSVPEGLPLWWEIWSEQKIAEGEGASPVLHLPQGLPHGVFRLHVRVAAPAGPLTNTACLVVCPDRAYQGGETAPQRMWALAVQLYGVRSSG
Ga0307288_101649802	3300028778	Soil	MNDIVERAARCGLETEFRDAFGQVQSVDPEVLARLLDSLAIGGEERPRMLPRTVVVRGQADHPLRLNVPEGLPLRWEMWAEQKIADGEGASPVLLLPKGLPHGVFRLHVRVAAPAGPLSDDACLV
Ga0307306_100138991	3300028782	Soil	MNDILERAVRCGLETEYRDAFGQLRSVEPEVLARLLDSLAVGGEEPPRMLPRTVVLRGQADPPLHLSVPEGLPLWWEIRSEQKIADGEGVSPVLHLPQGLPHGVFRLHVRVAAPAGPLTNTACLVVCPDRA
Ga0307287_103899411	3300028796	Soil	MNDIVERAARCGLETKFRDAFGQVQSVDPEVLARLLDSLAIGGEERPRMLPRTVVVRGQADHPLRLNVPEGLPLRWEMWAEQKIADGEGASPVLLLPKGLPHGVFRLHVRVAAPAGPLSDDACLVVCP
Ga0247824_106590071	3300028809	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKIADGEDVSPVLHLPQGLPHGVF
Ga0307296_108017631	3300028819	Soil	MNDIVERAARCGLETEFRDAFGQVQSVDPEVLARLLDSLAIGGEERPRMLPRTVVVRGQADHPLRLNVPEGLPLRWEMWAEQKIADGEGASPVLLLPKGLPHGVFRLHVRVAAPAGPLSDDACLVVCPDRAYQGGETAPQR
Ga0307310_103996902	3300028824	Soil	MNDILERAARWGLETEYRDAFGHLQSVEPEVLARLLDSLATGAGEPTQLLPRTVVVRGQDGRVLRLALPEGVSLRWEIWSEQRIAHGEGSSPVLHLPQGLPHGV
Ga0307310_105196791	3300028824	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAAGGEEPPRMLPRTVVVRGQADLPLHLSVPEGLPLWWEIWSEQKIVDGEGVSPVLHLPKGLPHGVFRLHVRVAAPAGPLSNAACLVVCPDRAYQGGETAPQRMW
Ga0307310_107348651	3300028824	Soil	MNDILERAARYGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEEPTQLLPRTVVVRGQDGRLLHLAVPEGVSLRWEIWSEQRIAHGEGNSPVLHLPQDLPHGVFRLHVT
Ga0307312_105405171	3300028828	Soil	MNDILERAARCGLEIEYRDAFGQLQSVEPEVLARLLDSLAAGGEEPPRMLPRTVVVRGQADLPLHLSVPEGLPLWWEIWSEQKIVDGEGVSPVLHLPKGLPHGVFRLHVRVAAPAGPLSNAACLVVCPDRA
Ga0307289_100206752	3300028875	Soil	MNDILERAARCGLETEYRDAFGQLRSVEPEVLARLLNSLAVGGEEPPRMLPRTVVLRGQADRLLHLSVPEGLPLWWEIRSEQKIADGEGVSPVLHLPQGLPHGVFRLHVRVAAPAGPLTNTACLVVCPDRAYQG
Ga0307304_102546791	3300028885	Soil	MNDILERAARWGLETEYRDAFGHLQSVEPEVLARLLDSLATGAGEPTQLLPRTVVVRGQDGRVLRLALPEGVSLRWEIWSEQRIAHGEGSSPVLHLPQGLPHGVFRLHVAAAAPAGAVTDTACLVVCPYRAYQGGEKAPQRMWALAV
Ga0307304_104454871	3300028885	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAAGGEEPPRMLPRTVVVRGQADLPLHLSVPEGLPLWWEIWSEQKIVDGEGVSPVLHLPKGLPHGVFRLHVRVAAPAGPLSNAACLVVCPDRAYQGGETAP
Ga0308198_10526681	3300030904	Soil	MNDILERAARYGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEEPTQLLPRTVVVRGQDGRLLHLAVPEGVSLRWEIWSEQRIAHGEGNSPVLHLPQDLPHGVFRLHVTAAAPAGVLTD
Ga0308200_11381741	3300030905	Soil	MNDILERAARYGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEEPTQLLPRTVVVRGQDGRLLHLALPEGVSLRWEIWSEQRIAHGEGSSPVLHLPQGLPHGVFRLHVAAAAPAGAVTDTACLVVCPYRA
Ga0308183_11122241	3300030988	Soil	MNDILERAARYGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEEPTQLLPRTVVVRGQDGRLLHLALPEGVSLRWEIWSEQRIAHGEGSSPVLHLPQGLPHGVFRLHVAAAAPAGAV
Ga0308199_10083901	3300031094	Soil	MNDILERAARYGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEEPTQLLPRTVVVRGQDGRLPHLAVPEGVSLRWEIWSEQRIAHGEGTSPVLHLPQDLPHGVLRLHVTAAAPAG
Ga0307497_100301411	3300031226	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKIADGEGVSPVLHLPQG
Ga0307506_102626281	3300031366	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKITDGEGVSPVLHLPQGLPQGVFRLHVRVTAPAGPLTNVACLVVCPDRAYQGGETALPRMWALA
Ga0308194_100569032	3300031421	Soil	MNDILERAARYGLETEYRDAFGHLQSVEPEVLARLLDSLATGGEEPTQLLPRTVVVRGQDGRLLHPAVPEGVSLRWEIWSEQRIAHGEGNSPVLHLPQDLPHGVFRLHVTAAAPAGGLTDTACLVVCPHRAYQ
Ga0310907_106219011	3300031847	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKIADGEDVSPVLHLPQGLPHGVFRLHVRVAAPAGPLTNVACLVVCPDRAYQGGETAPPRMWAL
Ga0310904_108283741	3300031854	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKITDGEGVSPVLHLPQGLPQGVFRLHVRVTAPAGPL
Ga0310900_108497001	3300031908	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKIADGEDVSPVLHLPQGLPHGVFRLHVRVAAPAGPLTNVACLVVCPDRAYQGGETAPPRMWALAVQLY
Ga0310890_101471942	3300032075	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEILARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKIADGEDVSPVLHLPQGLPHGVFRLHVRVAAPAGPL
Ga0310896_104401171	3300032211	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKIADGEDVSPVLHLPQGLPHGVFRLHVRVAAPAGPLTNVACLVVCPDRAYQ
Ga0247829_112984821	3300033550	Soil	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKIADGEGVSPVLHLPQGLPHGVFRLHVRVAAPAGPLTNVACLVVCPDRAYQGGETAPPRMWALA
Ga0364923_0085945_383_778	3300034690	Sediment	MNDILERAARCGLETEYRDAFGQLQSVEPEVLARLLDSLAVGGEEPPRMLPRTVVIRGQADRSLHLSVPEGLPLWWEIWSEQKIADGEDVSPVLHLPQGLPHGVFRLHVRVAAPAGPLTNVACLVVCPDRAY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087837

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences