NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F087728

Metagenome Family F087728

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F087728
Family Type Metagenome
Number of Sequences 110
Average Sequence Length 123 residues
Representative Sequence ILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT
Number of Associated Samples 106
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.91 %
% of genes near scaffold ends (potentially truncated) 94.55 %
% of genes from short scaffolds (< 2000 bps) 96.36 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (81.818 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(22.727 % of family members)
Environment Ontology (ENVO) Unclassified
(34.545 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.545 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 77.50%    β-sheet: 0.00%    Coil/Unstructured: 22.50%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF08734GYD 80.00
PF04227Indigoidine_A 10.00
PF00294PfkB 1.82
PF02754CCG 1.82
PF02844GARS_N 0.91
PF13302Acetyltransf_3 0.91
PF14833NAD_binding_11 0.91
PF07719TPR_2 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG4274Uncharacterized conserved protein, contains GYD domainFunction unknown [S] 80.00
COG2313Pseudouridine-5'-phosphate glycosidase (pseudoU degradation)Nucleotide transport and metabolism [F] 10.00
COG0247Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcFEnergy production and conversion [C] 1.82
COG2048Heterodisulfide reductase, subunit BEnergy production and conversion [C] 1.82
COG0151Phosphoribosylamine-glycine ligaseNucleotide transport and metabolism [F] 0.91


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A81.82 %
All OrganismsrootAll Organisms18.18 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_108842390Not Available769Open in IMG/M
3300001686|C688J18823_10097111All Organisms → cellular organisms → Bacteria2046Open in IMG/M
3300002077|JGI24744J21845_10070855Not Available636Open in IMG/M
3300002244|JGI24742J22300_10081305Not Available613Open in IMG/M
3300002568|C688J35102_118635476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria579Open in IMG/M
3300005330|Ga0070690_100552177Not Available869Open in IMG/M
3300005332|Ga0066388_100144876All Organisms → cellular organisms → Bacteria2946Open in IMG/M
3300005333|Ga0070677_10150975Not Available1081Open in IMG/M
3300005337|Ga0070682_101254837Not Available628Open in IMG/M
3300005338|Ga0068868_100937268Not Available789Open in IMG/M
3300005339|Ga0070660_101957191Not Available500Open in IMG/M
3300005341|Ga0070691_10696278Not Available610Open in IMG/M
3300005345|Ga0070692_10244136Not Available1072Open in IMG/M
3300005347|Ga0070668_100068979All Organisms → cellular organisms → Bacteria2750Open in IMG/M
3300005353|Ga0070669_101902081Not Available520Open in IMG/M
3300005356|Ga0070674_100324448Not Available1235Open in IMG/M
3300005440|Ga0070705_101541968Not Available558Open in IMG/M
3300005444|Ga0070694_101503943Not Available570Open in IMG/M
3300005455|Ga0070663_102015195Not Available520Open in IMG/M
3300005459|Ga0068867_100192069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1630Open in IMG/M
3300005539|Ga0068853_101994284Not Available563Open in IMG/M
3300005577|Ga0068857_101216815Not Available730Open in IMG/M
3300005578|Ga0068854_101411927Not Available630Open in IMG/M
3300005615|Ga0070702_101000901Not Available662Open in IMG/M
3300005841|Ga0068863_100883202Not Available894Open in IMG/M
3300006169|Ga0082029_1104676Not Available1120Open in IMG/M
3300006237|Ga0097621_100232225Not Available1611Open in IMG/M
3300009011|Ga0105251_10165827Not Available996Open in IMG/M
3300009098|Ga0105245_10671347Not Available1068Open in IMG/M
3300009100|Ga0075418_10432597All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1409Open in IMG/M
3300009147|Ga0114129_10815047Not Available1190Open in IMG/M
3300009147|Ga0114129_11251889Not Available922Open in IMG/M
3300009545|Ga0105237_10671034Not Available1043Open in IMG/M
3300009553|Ga0105249_10194757Not Available1980Open in IMG/M
3300010041|Ga0126312_10762030All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria701Open in IMG/M
3300010044|Ga0126310_11121518Not Available627Open in IMG/M
3300010400|Ga0134122_10725132Not Available938Open in IMG/M
3300010403|Ga0134123_11701891Not Available681Open in IMG/M
3300010999|Ga0138505_100060166Not Available556Open in IMG/M
3300011000|Ga0138513_100047145All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300012884|Ga0157300_1031817Not Available756Open in IMG/M
3300012891|Ga0157305_10016712Not Available1267Open in IMG/M
3300012893|Ga0157284_10022387Not Available1243Open in IMG/M
3300012900|Ga0157292_10025107All Organisms → cellular organisms → Bacteria1459Open in IMG/M
3300012901|Ga0157288_10158036Not Available684Open in IMG/M
3300012905|Ga0157296_10398275Not Available514Open in IMG/M
3300012912|Ga0157306_10022802All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1362Open in IMG/M
3300012913|Ga0157298_10065968Not Available885Open in IMG/M
3300012914|Ga0157297_10077773Not Available943Open in IMG/M
3300013102|Ga0157371_10780967Not Available719Open in IMG/M
3300013297|Ga0157378_11174724Not Available806Open in IMG/M
3300013306|Ga0163162_11071310Not Available913Open in IMG/M
3300014302|Ga0075310_1090451Not Available639Open in IMG/M
3300014314|Ga0075316_1050926Not Available900Open in IMG/M
3300014325|Ga0163163_10708359Not Available1070Open in IMG/M
3300015077|Ga0173483_10843730Not Available533Open in IMG/M
3300015201|Ga0173478_10665864Not Available551Open in IMG/M
3300015372|Ga0132256_102305024Not Available642Open in IMG/M
3300018054|Ga0184621_10172663All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300018067|Ga0184611_1292832Not Available567Open in IMG/M
3300018073|Ga0184624_10263067All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300018469|Ga0190270_11068963Not Available838Open in IMG/M
3300019361|Ga0173482_10410215Not Available632Open in IMG/M
3300019361|Ga0173482_10506483Not Available587Open in IMG/M
3300019869|Ga0193705_1048213Not Available883Open in IMG/M
3300019876|Ga0193703_1050233All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300021510|Ga0222621_1096574Not Available626Open in IMG/M
3300022694|Ga0222623_10271271Not Available653Open in IMG/M
3300022756|Ga0222622_10228572Not Available1249Open in IMG/M
3300022756|Ga0222622_10561312All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300022899|Ga0247795_1024076Not Available987Open in IMG/M
3300022915|Ga0247790_10040315Not Available1055Open in IMG/M
3300023064|Ga0247801_1041215All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300025904|Ga0207647_10512636Not Available668Open in IMG/M
3300025907|Ga0207645_10252032Not Available1168Open in IMG/M
3300025918|Ga0207662_10334385Not Available1014Open in IMG/M
3300025923|Ga0207681_11303885Not Available610Open in IMG/M
3300025938|Ga0207704_11155232Not Available659Open in IMG/M
3300025942|Ga0207689_10142941Not Available1971Open in IMG/M
3300025960|Ga0207651_10809163Not Available831Open in IMG/M
3300025981|Ga0207640_11955051Not Available531Open in IMG/M
3300026035|Ga0207703_11304248Not Available698Open in IMG/M
3300026088|Ga0207641_10331480Not Available1446Open in IMG/M
3300026089|Ga0207648_10597199Not Available1017Open in IMG/M
3300026116|Ga0207674_11065080Not Available778Open in IMG/M
3300026756|Ga0207577_100352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia964Open in IMG/M
3300026827|Ga0207591_102904Not Available745Open in IMG/M
3300027543|Ga0209999_1014040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1453Open in IMG/M
3300027821|Ga0209811_10246361Not Available681Open in IMG/M
3300028379|Ga0268266_11845591Not Available579Open in IMG/M
3300028707|Ga0307291_1156474Not Available581Open in IMG/M
3300028711|Ga0307293_10072658Not Available1082Open in IMG/M
3300028719|Ga0307301_10003619All Organisms → cellular organisms → Bacteria4311Open in IMG/M
3300028721|Ga0307315_10023801Not Available1602Open in IMG/M
3300028754|Ga0307297_10095003Not Available974Open in IMG/M
3300028787|Ga0307323_10031881All Organisms → cellular organisms → Bacteria1831Open in IMG/M
3300028796|Ga0307287_10144864Not Available902Open in IMG/M
3300028809|Ga0247824_10455456Not Available748Open in IMG/M
3300028811|Ga0307292_10497784Not Available522Open in IMG/M
3300028812|Ga0247825_10312221Not Available1100Open in IMG/M
3300028824|Ga0307310_10425764Not Available661Open in IMG/M
3300028889|Ga0247827_10998699Not Available568Open in IMG/M
3300030336|Ga0247826_10404453Not Available1009Open in IMG/M
3300030336|Ga0247826_11021595All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300031740|Ga0307468_100627955Not Available883Open in IMG/M
3300031858|Ga0310892_10464928Not Available836Open in IMG/M
3300031908|Ga0310900_10885715Not Available727Open in IMG/M
3300031943|Ga0310885_10718708Not Available562Open in IMG/M
3300032012|Ga0310902_10677783Not Available692Open in IMG/M
3300032013|Ga0310906_10692116Not Available711Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil22.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil9.09%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere5.45%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.55%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.55%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.55%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.64%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.73%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.73%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.73%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.73%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.82%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.82%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.82%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.82%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.82%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil1.82%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.82%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.82%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.91%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.91%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.91%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.91%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.91%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.91%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.91%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.91%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002077Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3Host-AssociatedOpen in IMG/M
3300002244Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1Host-AssociatedOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010999Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015EnvironmentalOpen in IMG/M
3300011000Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015EnvironmentalOpen in IMG/M
3300012884Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2EnvironmentalOpen in IMG/M
3300012891Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2EnvironmentalOpen in IMG/M
3300012893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1EnvironmentalOpen in IMG/M
3300012900Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1EnvironmentalOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014302Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2EnvironmentalOpen in IMG/M
3300014314Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019869Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2EnvironmentalOpen in IMG/M
3300019876Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2EnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300022899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6EnvironmentalOpen in IMG/M
3300022915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4EnvironmentalOpen in IMG/M
3300023064Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6EnvironmentalOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026756Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10K2-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026827Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A4-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027543Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10884239023300000955SoilVVVLVFAVAWLAFVGLSIPVAMIEKPPDGTRWYEHIAYALTRGSELARKEYLHVLGITAALVLIYAILGPILAGLLTGFGDNGTLVASVIANGVIGPFFFLGLSLLYFEQNARAL
C688J18823_1009711133300001686SoilAWAQVGVRLPVLLVLTLVVSVPFVLGRVDPLLLVFSVAWLAFVGLSIPVAMTERSPEAETWYKRIGFVLSRATALARAEYLHVLGVMAAFVLVYLLLGPVLAVLLAGFADNGSAAAGLIANGVIGPFFFLGLSLLFFEQKARKDQLGSGQAER*
JGI24744J21845_1007085513300002077Corn, Switchgrass And Miscanthus RhizosphereLAIPVAMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLNMLYFEQRARELSSPPKPKT*
JGI24742J22300_1008130523300002244Corn, Switchgrass And Miscanthus RhizosphereTSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASLIANGVLGPFFFLGLXXLYFEQRARELSSPPKPKT*
C688J35102_11863547613300002568SoilAMTERSTEVETWYKHIAFALSRATALARAEYLHVLGVMAAFVLVFLLLGPVLAVLLAGFADNGGVAAGLIANGIVGPFFFLGLSLLFFEQKARKEHVGAPPPTAG*
Ga0070690_10055217733300005330Switchgrass RhizosphereIPVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT*
Ga0066388_10014487613300005332Tropical Forest SoilVFVLFLSVGWLAFVGLSIPVAMIERRSEQTRWYELIAYALTRGSDLARKEYLHVLGITAALVLIYAILGPILTGLLTGFGDNGARVASVIANGVIGPFFFLGLSLLYFEQNARALSSPPKPKT*
Ga0070677_1015097513300005333Miscanthus RhizosphereSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT*
Ga0070682_10125483713300005337Corn RhizosphereFVLGIVDVLILFFSVAWLAFVGLAIPVAMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLNMLYFEQRARELSSPPKPKT*
Ga0068868_10093726813300005338Miscanthus RhizosphereAIPVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT*
Ga0070660_10195719113300005339Corn RhizosphereMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLNMLYFEQRARELSSPPKPKT*
Ga0070691_1069627823300005341Corn, Switchgrass And Miscanthus RhizosphereAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRALSSPQPKT*
Ga0070692_1024413613300005345Corn, Switchgrass And Miscanthus RhizosphereLTIIVSLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRALSSPQPKT*
Ga0070668_10006897913300005347Switchgrass RhizosphereLFFSVAWLAFVGLAIPVAMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLSMLYFEQRARTLSSPPKPKT
Ga0070669_10190208123300005353Switchgrass RhizosphereGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT*
Ga0070674_10032444813300005356Miscanthus RhizosphereVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT*
Ga0070705_10154196813300005440Corn, Switchgrass And Miscanthus RhizosphereIPVAMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLNMLYFEQRARELSSPPKPKT*
Ga0070694_10150394313300005444Corn, Switchgrass And Miscanthus RhizosphereGIVDVIVLVFAVAWFAFVGLSIPVAMIERPPEGTRWYEHIAYALTRGSELARKEYLHVLGITAALVLIYAILGPILTGLLTGFGDNGTLVASVIANGVIGPFFFLGLSLLYFEQNARALSSPPKPKT*
Ga0070663_10201519513300005455Corn RhizospherePEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT*
Ga0068867_10019206923300005459Miscanthus RhizosphereMIERPPEGTRWYEHIAYALTRGSELARKEYLHVLGITAALVLIYAILGPILTGLLTGFGDNGTLVASVIANGVIGPFFFLGLSLLYFEQNARALSSPPKPKT*
Ga0068853_10199428413300005539Corn RhizosphereVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRTLSSPQPKT*
Ga0068857_10121681513300005577Corn RhizosphereWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT*
Ga0068854_10141192723300005578Corn RhizospherePFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT*
Ga0070702_10100090123300005615Corn, Switchgrass And Miscanthus RhizosphereLAPLTIIVSVPFVLGIVDVLILFFSVAWLAFVGLAIPVAMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSRAASVIANGVLGPFFFLGLNMLYFEQRARELSSPPKPKT*
Ga0068863_10088320233300005841Switchgrass RhizosphereFSVAALSLKKKAIPVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT*
Ga0082029_110467613300006169Termite NestVAVIERAPKGTSWFGQIGFSVTRATDLARVEFLHVLGVSAALTVIYALFGPLLGVLLTGFAENGGIAARAMSNGVLGPFFFLGLSILYFEQRARTLSSPPKPTT*
Ga0097621_10023222513300006237Miscanthus RhizosphereAAGEAWAQVGLRAPVLAPLTIIVSLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT*
Ga0105251_1016582713300009011Switchgrass RhizosphereLTIIVSLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFAANGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPQPKT*
Ga0105245_1067134713300009098Miscanthus RhizosphereAWAQVGLRAPVLAPLTIIVSLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT*
Ga0075418_1043259723300009100Populus RhizosphereMIEKPPDGTRWYEHIAYALTRGSELARKEYLHVLGITAALVLIYAILGPILAGLLTGFGDNGTLVASVIANGVIGPFFFLGFSLLYFEQNARALSSPPKPKT*
Ga0114129_1081504743300009147Populus RhizosphereVPFVLGIVDVVVLVFAVAWLAFVGLSIPVAMIEKPPDGTRWYEHIAYALTRGSELARKEYLHVLGITAALVLIYAILGPILAGLLTGFGDNGTLVASVIANGVIGPFFFLGLSLLYFEQNARALSSPPKPKT*
Ga0114129_1125188933300009147Populus RhizosphereMIIVSLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRTLSSPQPKT*
Ga0105237_1067103443300009545Corn RhizosphereSVAWLAFVGLAIPVAMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASLIANGVLGPFFFLGLNMLYFEQRARELSSPPKPKT*
Ga0105249_1019475713300009553Switchgrass RhizosphereQAGLRAPILAPLTIIVSVPFVLGIVDVLILFFSVAWLAFVGLAIPVAMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLNMLYFEQRARELSSPPKPKT*
Ga0126312_1076203013300010041Serpentine SoilVGLAVPVAMIERAPEGTSWFGQITFALTRATDLARIEFLHVLGVSAALVLIYALLGPILGVLLTGFADNGRIAARVMANGVLGPFFFLGLSLLYFEQKARALSSAQPKT*
Ga0126310_1112151823300010044Serpentine SoilFFSVAWLAFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAAHVMANGVLGPFFFLGLSLLYFEQRSRALSSPQPKT*
Ga0134122_1072513233300010400Terrestrial SoilVLGIVDALILFFSVAAVSLKKNTIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRALSSPQPKT*
Ga0134123_1170189113300010403Terrestrial SoilIIVSLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLVPFFFLGLSLLYFEQRSGALSSPQPKT*
Ga0138505_10006016613300010999SoilLILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYVEQKSRALSSPQPKT*
Ga0138513_10004714523300011000SoilMLGRGPELDAWYERIGFALGRATALARSEYLHVLGVTAAFVAVYLLLGPVLAVLLTGFAENGGLAASLIANGVIGPFFFLGLSLLYFEQKARALSSPPKKQT*
Ga0157300_103181723300012884SoilGLRAPILAPLTIIVSVPFVLGIVDVLILFFSVAWLAFVGLAIPVAMIERAPEATSWFGRIGYALTRSTDLARVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLSMLYFEQRARELSSPPKPKT*
Ga0157305_1001671213300012891SoilPEATSWFGRIGYALTRSTDLVRVEFLHVLGVSAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLSMLYFEQRARELSSPPKPKT*
Ga0157284_1002238713300012893SoilAWAQVGLRAPVLAPLTIIVSLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIECAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT*
Ga0157292_1002510743300012900SoilFSPSILVDNIHWGTAPTWGNFFIAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGTLAARVLANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT*
Ga0157288_1015803633300012901SoilAMLERDPEQESWYQRIGFALGRATALARSEYLHVLGVMAAFVVVYLLIGPILAVLLTGFADNGSLAASVIANGVLGPFFFLGLSLLYFEQKSRALSSPQPKT*
Ga0157296_1039827513300012905SoilERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVSAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLSMLYFEQRARTLSSPPKPKT*
Ga0157306_1002280243300012912SoilLRAPVLAPLTIIVSLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGTLAARVLANGVLGPFFFLGLSLLYFEQKSRALSSPQPKT*
Ga0157298_1006596813300012913SoilILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT
Ga0157297_1007777333300012914SoilAPVLAPLTIIVSVPFVLGIVDVLILFFSVAWLAFVGLAIPVAMIERAPEATSWFGRIGYALTRSTDLARVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLSMLYFEQRARELSSPPKPKT*
Ga0157371_1078096713300013102Corn RhizosphereVLILFFSVAWLAFVGLAIPVAMIERAPEAPSWFGRIGYALTRSTDLARVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASLIANGVLGPFFFLGLSMLYFAQRARELSSPSKPKT*
Ga0157378_1117472433300013297Miscanthus RhizosphereGAVAWLACVGLAIPVAMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLNMLYFEQRARELSSPPKPKT*
Ga0163162_1107131043300013306Switchgrass RhizosphereRAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPQPKT*
Ga0075310_109045123300014302Natural And Restored WetlandsVLGIVDVLILFFSVAWLAFVGLAIPVAMVERAPGGTSWFGQIGFALTRASDLARAEFLHVLGVSAALVIIYAILGPLLAFLLTGFADNGSLAASVIANGVLGPFFFLGLSLLYFEQKARALSSAQPKT*
Ga0075316_105092613300014314Natural And Restored WetlandsRAAVLAPLTVIVSVPFVLGIVDVLILFFSVAWLAFVGLAIPVAMVERAPGGTSWFGQIGFALTRASDLARAEFLHVLGVSAALVIIYAILGPLLAFLLTGFADNGSLAASVIANGVLGPFFFLGLSLLYFEQKARALSSAQPKT*
Ga0163163_1070835943300014325Switchgrass RhizosphereVLAPLTIIVSLPFVLGIVDALILFFSVAWLSFVGLAIHVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT*
Ga0173483_1084373013300015077SoilTIIVSLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGTLAARVLANGVLGPFFFLGLSLLYFEQKSRALSSPQPKT*
Ga0173478_1066586423300015201SoilFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGTLAARVLANGVLGPFFFLGLSLLYFEQKSRALSSPQPKT*
Ga0132256_10230502423300015372Arabidopsis RhizosphereAPVLAPLTIIVSLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT*
Ga0184621_1017266333300018054Groundwater SedimentERAPEGTSWFGQIGFALTRATDLARPEFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRALSSPQPKT
Ga0184611_129283213300018067Groundwater SedimentIPVAMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLSMLYFEQRARELSSPSKPKT
Ga0184624_1026306713300018073Groundwater SedimentPVAMLERDPELDAWYERIGFALGRATALARSEYLHVLGVTAAFVAVYLLLGPVLAVLLTGFAENGGLAASLIANGVIGPFFFLGLSLLYFEQKARALSSPPKKQT
Ga0190270_1106896333300018469SoilVGLRAPVLAPLMIIVSLPFVLGIVDALILFFSVAWLAFVGLAIPVAMIERAPQGTSWFGQIGFALTRATDLARVEFLHVLGVRAALTVIYALFGPFLGLLLTGFADNGGLAARVMANGVLGPFFFLGLSLLYFEQRSRTLSSPQPKT
Ga0173482_1041021523300019361SoilLILFFSVAWISFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPQPK
Ga0173482_1050648323300019361SoilFVLGIVDVLILFFSVAWLAFVGLAIPVAMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSRAASVIANGVLGPFFFLGLSMLYFEQRARTLSSPPKPKT
Ga0193705_104821333300019869SoilLTLVVSVPFVLGRVDPLLLLFGVAWLAFVGLSIPVAMLERNPEQDTWYGRIGFALGRATVLARAEYLHVLGVMAAFVAVYLLLGPVLAILLTGFAENGSLAASLIANAVLGPFFFLGLSLLYFEQKARALSSPPEPKN
Ga0193703_105023313300019876SoilMIERAPEGTSWFGQIGYALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRALSSPQPKT
Ga0222621_109657413300021510Groundwater SedimentSVAWISFVGLSIPVAMLERDPELDAWYERIGFALGRATALARSEYLHVLGVTAAFVAVYLLLGPVLAVLLTGFAENGGLAASLIANGVIGPFFFLGLSLLYFEQKARALSSPPKKQT
Ga0222623_1027127123300022694Groundwater SedimentGDPAAEAWAQVGIRIPVLLVLTLVVSVPFVLGRVDPLLLLFGVAWLAFVGLSIPVAMLERNPEQDTWYGRIGFALGRATVLARAEYLHVLGVMAAFVAVYLLLGPVLAILLTGFAENGSLAASLIANAVLGPFFFLGLSLLYFEQKARALSSPPEPKN
Ga0222622_1022857213300022756Groundwater SedimentGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRALSSPQPKT
Ga0222622_1056131233300022756Groundwater SedimentPLLLLFGVAWLAFVGLSIPVAMLERNPEQDTWYGRIGFALGRATVLARSEYLHVLGVMAAFVAVYLLLGPVLAILLTGFAENGSLVASLIANAVLGPFFFLGLSLLYFEQKARALSSPPEPKN
Ga0247795_102407613300022899SoilLGDPAAEAWAQAGLRAPILAPLTIIVSVPFVLGIVDVLILFFSVAWLAFVGLAIPVAMIERAPEATSWFGRIGYALTRSTDLARVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLSMLYFEQRARELSSPPKPKT
Ga0247790_1004031543300022915SoilGIVDVLILFFSVAWLAFVGLALPVAMIERAPEATSWFGRIGYALTRSTDLARVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLSMLYFEQRARELSSPPKPKT
Ga0247801_104121513300023064SoilGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGTLAARVLANGVLGPFFFLGLSLLYFEQKSRALSSPQPKT
Ga0207647_1051263623300025904Corn RhizosphereGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT
Ga0207645_1025203213300025907Miscanthus RhizosphereIIVSVPFVLGIVDVLILFFSVAWLAFVGLAIPVAMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLNMLYFEQRARELSSPPKPKT
Ga0207662_1033438513300025918Switchgrass RhizosphereVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT
Ga0207681_1130388523300025923Switchgrass RhizosphereSIPVAMIEKPPDGTRWYEHIAYALTRGSELARKEYLHVLGITAALVLIYAILGPILTGLLTGFGDNGTLVASVIANGVIGPFFFLGLSLLYFEQNARALSSPPKPKT
Ga0207704_1115523213300025938Miscanthus RhizosphereERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLSMLYFEQRARELSSPPKPKT
Ga0207689_1014294113300025942Miscanthus RhizospherePILAPLTIIVSVPFVLGIVDVLILFFSVAWLAFVGLAIPVAMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLNMLYFEQRARELSSPPKPKT
Ga0207651_1080916333300025960Switchgrass RhizosphereLTIIVSLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT
Ga0207640_1195505113300025981Corn RhizosphereLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT
Ga0207703_1130424823300026035Switchgrass RhizosphereVGLRAPVLAPLTIIVSLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT
Ga0207641_1033148043300026088Switchgrass RhizosphereMPIESLAMIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVSAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT
Ga0207648_1059719933300026089Miscanthus RhizosphereMIERPPEGTRWYEHIAYALTRGSELARKEYLHVLGITAALVLIYAILGPILTGLLTGFGDNGTLVASVIANGVIGPFFFLGLSLLYFEQNARALSSPPKPKT
Ga0207674_1106508023300026116Corn RhizosphereVGLRAPVLAPLMIIVSLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGYALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRALSSPQPKT
Ga0207577_10035213300026756SoilVAMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLSMLYFEQRARELSSPPKPKT
Ga0207591_10290413300026827SoilAFVGLALPVAMIERAPEATSWFGRIGYALTRSTDLARVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLSMLYFEQRARELSSPPKPKT
Ga0209999_101404023300027543Arabidopsis Thaliana RhizosphereVLGIVDVLILFFSVAWLAFVGLAIPVAMIERAPEATSWFGRIGYALTRSTDLARVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLSMLYFEQRARELSSPPKPKT
Ga0209811_1024636113300027821Surface SoilSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRTLSSPQPKT
Ga0268266_1184559113300028379Switchgrass RhizosphereIERAPEGTSWFGQIGFALTRATDLARLEFLHVLGVRAALTVIYALFGPFLGLLLTGFADNGSLAARVMANGVLGPFFFLGLSLLYFEQRSRALSSPEPKT
Ga0307291_115647423300028707SoilLGRIDPLLLLFSVAWISFVGLSIPVAMLERDPELDAWYERIGFALGRATALARSEYLHVLGVTAAFVAVYLLLGPVLAVLLTGFAENGGLAASLIANGVIGPFFFLGLSLLYFEQKARALSSPPKKQT
Ga0307293_1007265843300028711SoilFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRALSSPQPKT
Ga0307301_1000361913300028719SoilVLLVLTVVVAVPFVLGRIDPLLLLFSVAWISFVGLSIPVAMLERDPELDAWYERIGFALGRATALARSEYLHVLGVTAAFVAVYLLLGPVLAVLLTGFAENGGLAASLIANGVIGPFFFLGLSLLYFEQKARALSSPPKKQT
Ga0307315_1002380113300028721SoilDPLLLLFSVAWISFVGLSIPVAMLERDPELDAWYERIGFALGRATALARSEYLHVLGVTAAFVAVYLLLGPVLAVLLTGFAENGGLAASLIANGVIGPFFFLGLSLLYFEQKARALSSPPKKQT
Ga0307297_1009500333300028754SoilPAAEAWAQVGIRVPVLLVLTVVVAVPFVLGRIDPLLLLFSVAWISFVGLSIPVAMLERDPELDAWYERIGFALGRATALARSEYLHVLGVTAAFVAVYLLLGPVLAVLLTGFAENGGLAASLIANGVIGPFFFLGLSLLYFEQKARALSSPPKKQT
Ga0307323_1003188113300028787SoilLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRALSSPQPKT
Ga0307287_1014486413300028796SoilLVLTLVVSVPFVLGRVDPLLLLFGVAWLAFVGLSIPVAMLERNPEQDTWYGRIGFALGRATVLARAEYLHVLGVMAAFVAVYLLLGPVLAILLTGFAENGSLAASLIANAVLGPFFFLGLSLLYFEQKARALSSPPEPKN
Ga0247824_1045545623300028809SoilVLAPLMIIVSLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRALSSPQPKT
Ga0307292_1049778423300028811SoilRDPEQEAWYRRIGFVLGRATALARSEYLHVLGVMAAFVGVYLLLGPVLAVLLTGFADNGSLAASVIANGVLGPFFFLGLSLLYFEQKARVELAGKNVMDG
Ga0247825_1031222143300028812SoilAEAWAQVGLRAPVLAPLMIIVSLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRTLSSPQPKT
Ga0307310_1042576413300028824SoilAWLAFVGLSIPVAMLERNPEQDTWYGRIGFALGRATVLARAEYLHVLGVMAAFVAVYLLLGPVLAILLTGFAENGSLVASLIANAVLGPFFFLGLSLLYFEQKARALSSPPEPKN
Ga0247827_1099869923300028889SoilLTIIVSVPFVLGIVDVLILFFSVAWLAFVGLAIPVAMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAAFVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLSMLYFEQRARELSSPSKPKT
Ga0247826_1040445313300030336SoilLILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRTLSSPQPK
Ga0247826_1102159523300030336SoilVVSVPFVLGIVDVIVLVFAVAWLAFVGLSIPVAMIERPRKRTRWYEQIAYALTRGSELARKEYLHVLGITAALVLIYAILGPILTGLLTGFGDNGTLVASVIANGVIGPFFFLGLSLLYFEQNARALSSPPKPKT
Ga0307468_10062795533300031740Hardwood Forest SoilVSVPFVLGIVDVLILFFSVAWLAFVGLAIPVAMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLNMLYFEQRARELSSPPKPKT
Ga0310892_1046492813300031858SoilVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALLGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRTLSSPQPKT
Ga0310900_1088571523300031908SoilLFFSVAWLAFVGLAIPVAMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLNMLYFEQRARELSSPPKPKT
Ga0310885_1071870813300031943SoilAQAGLRAPILAPLTIIVSVPFVLGIVDVLILFFSVAWLAFVGLAIPVAMIERAPEATSWFGRIGYALTRSTDLVRVEFLHVLGVCAALVLIYALLGPLLAVLLTGFADNGSLAASVIANGVLGPFFFLGLNMLYFEQRARELSSPPKPKT
Ga0310902_1067778323300032012SoilAPVLAPLMIIVSLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRTLSSPQPKT
Ga0310906_1069211623300032013SoilEAWAQVGLRAPVLAPLMIIVSLPFVLGIVDALILFFSVAWLSFVGLAIPVAMIERAPEGTSWFGQIGFALTRATDLARPDFLHVLGVSAALTVIYALFGPFLGILLTGFADNGSLAARVLANGVLGPFFFLGLSLLYFEQKSRTLSSPQPKT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.