Metagenome / Metatranscriptome Family F087703

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087703
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	62 residues
Representative Sequence	MRILTIALSAAFLALPFAAPVQACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Number of Associated Samples	88
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.76 %
% of genes near scaffold ends (potentially truncated)	32.73 %
% of genes from short scaffolds (< 2000 bps)	79.09 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.182 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (9.091 % of family members)
Environment Ontology (ENVO)	Unclassified (19.091 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.636 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 74.19% β-sheet: 0.00% Coil/Unstructured: 25.81%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF04588	HIG_1_N	40.91
PF01923	Cob_adeno_trans	38.18
PF01012	ETF	5.45
PF13641	Glyco_tranf_2_3	3.64
PF02630	SCO1-SenC	2.73
PF00294	PfkB	1.82
PF01522	Polysacc_deac_1	0.91
PF00043	GST_C	0.91
PF02737	3HCDH_N	0.91
PF02538	Hydantoinase_B	0.91
PF08327	AHSA1	0.91
PF12681	Glyoxalase_2	0.91
PF02798	GST_N	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2025	Electron transfer flavoprotein, alpha subunit FixB	Energy production and conversion [C]	5.45
COG2086	Electron transfer flavoprotein, alpha and beta subunits	Energy production and conversion [C]	5.45
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	2.73
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	2.73
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	1.82
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.91
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.91
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	0.91
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.91
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.91
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.91
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.18 %
Unclassified	root	N/A	21.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.18 %
Unclassified	root	N/A	21.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.18 %
Unclassified	root	N/A	21.82 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	77.27 %
Unclassified	root	N/A	21.82 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	72.73 %
Unclassified	root	N/A	21.82 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	50.91 %
Unclassified	root	N/A	21.82 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.82 %

Name	Rank	Taxonomy	Distribution
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	23.64 %
Unclassified	root	N/A	21.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.27 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.82 %

Name	Rank	Taxonomy	Distribution
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	23.64 %
Unclassified	root	N/A	21.82 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1.82 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	23.64 %
Unclassified	root	N/A	21.82 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1.82 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.82 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	18.18 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	5.45 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1.82 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886013\|SwBSRL2_contig_40134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1767	Open in IMG/M
2228664022\|INPgaii200_c0497256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	642	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0812575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2039	Open in IMG/M
3300000156\|NODE_c0731436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8156	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105672669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1826	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10024698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1428	Open in IMG/M
3300002906\|JGI25614J43888_10068927	Not Available	1009	Open in IMG/M
3300004479\|Ga0062595_100103940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1520	Open in IMG/M
3300004633\|Ga0066395_10083230	All Organisms → cellular organisms → Bacteria → Proteobacteria	1504	Open in IMG/M
3300005160\|Ga0066820_1012738	All Organisms → cellular organisms → Bacteria → Proteobacteria	584	Open in IMG/M
3300005169\|Ga0066810_10008248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1468	Open in IMG/M
3300005294\|Ga0065705_10177164	Not Available	1615	Open in IMG/M
3300005332\|Ga0066388_100114132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3205	Open in IMG/M
3300005332\|Ga0066388_100195660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2639	Open in IMG/M
3300005332\|Ga0066388_101088698	Not Available	1351	Open in IMG/M
3300005332\|Ga0066388_103038894	All Organisms → cellular organisms → Bacteria → Proteobacteria	857	Open in IMG/M
3300005332\|Ga0066388_105153388	Not Available	663	Open in IMG/M
3300005332\|Ga0066388_106005161	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300005347\|Ga0070668_101012240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	747	Open in IMG/M
3300005434\|Ga0070709_10006339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	6442	Open in IMG/M
3300005437\|Ga0070710_10025481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3132	Open in IMG/M
3300005439\|Ga0070711_100140581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1809	Open in IMG/M
3300005445\|Ga0070708_100934417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	814	Open in IMG/M
3300005455\|Ga0070663_100546701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	967	Open in IMG/M
3300005764\|Ga0066903_101620482	All Organisms → cellular organisms → Bacteria → Proteobacteria	1228	Open in IMG/M
3300006028\|Ga0070717_10017570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	5570	Open in IMG/M
3300006047\|Ga0075024_100035165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2062	Open in IMG/M
3300006050\|Ga0075028_100165622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1176	Open in IMG/M
3300006050\|Ga0075028_100410606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300006059\|Ga0075017_101090810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	623	Open in IMG/M
3300006172\|Ga0075018_10135885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1123	Open in IMG/M
3300006574\|Ga0074056_10376452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	912	Open in IMG/M
3300006854\|Ga0075425_100062610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4175	Open in IMG/M
3300006871\|Ga0075434_100300605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1625	Open in IMG/M
3300006904\|Ga0075424_100687575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1092	Open in IMG/M
3300006904\|Ga0075424_102520308	Not Available	538	Open in IMG/M
3300006954\|Ga0079219_10139940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1272	Open in IMG/M
3300006954\|Ga0079219_10272910	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300009098\|Ga0105245_10863389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	945	Open in IMG/M
3300009545\|Ga0105237_10393473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1391	Open in IMG/M
3300010043\|Ga0126380_11475366	Not Available	601	Open in IMG/M
3300010359\|Ga0126376_12322870	Not Available	582	Open in IMG/M
3300010359\|Ga0126376_12548050	Not Available	559	Open in IMG/M
3300010361\|Ga0126378_11445656	Not Available	779	Open in IMG/M
3300010366\|Ga0126379_11225190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	857	Open in IMG/M
3300010366\|Ga0126379_13838420	Not Available	503	Open in IMG/M
3300010398\|Ga0126383_10007679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	7610	Open in IMG/M
3300011270\|Ga0137391_10112024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2366	Open in IMG/M
3300012473\|Ga0157340_1020878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300012483\|Ga0157337_1006072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	826	Open in IMG/M
3300012497\|Ga0157319_1004207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	933	Open in IMG/M
3300012503\|Ga0157313_1008041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	838	Open in IMG/M
3300012505\|Ga0157339_1062736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300012955\|Ga0164298_10000917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	8583	Open in IMG/M
3300012957\|Ga0164303_10507112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	774	Open in IMG/M
3300012961\|Ga0164302_10003364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	5513	Open in IMG/M
3300012971\|Ga0126369_10403139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1406	Open in IMG/M
3300012971\|Ga0126369_10588089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1182	Open in IMG/M
3300015371\|Ga0132258_10614202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2731	Open in IMG/M
3300015373\|Ga0132257_100892937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1114	Open in IMG/M
3300015373\|Ga0132257_100892938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1114	Open in IMG/M
3300015373\|Ga0132257_104059594	Not Available	532	Open in IMG/M
3300016270\|Ga0182036_10389735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1083	Open in IMG/M
3300016371\|Ga0182034_10002774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	9002	Open in IMG/M
3300017936\|Ga0187821_10283323	Not Available	654	Open in IMG/M
3300017944\|Ga0187786_10084690	Not Available	1035	Open in IMG/M
3300017944\|Ga0187786_10570229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300017947\|Ga0187785_10003168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	5381	Open in IMG/M
3300017947\|Ga0187785_10016238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2595	Open in IMG/M
3300017947\|Ga0187785_10018547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2444	Open in IMG/M
3300017947\|Ga0187785_10036242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1805	Open in IMG/M
3300017947\|Ga0187785_10190944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	886	Open in IMG/M
3300017959\|Ga0187779_11284789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300018060\|Ga0187765_10170916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1239	Open in IMG/M
3300021560\|Ga0126371_10233711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1947	Open in IMG/M
3300025735\|Ga0207713_1180422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	660	Open in IMG/M
3300025904\|Ga0207647_10344191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	845	Open in IMG/M
3300025905\|Ga0207685_10651900	Not Available	569	Open in IMG/M
3300025916\|Ga0207663_10033186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3072	Open in IMG/M
3300025932\|Ga0207690_11335704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300025938\|Ga0207704_10168583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1567	Open in IMG/M
3300026304\|Ga0209240_1265726	Not Available	527	Open in IMG/M
3300026319\|Ga0209647_1006978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8010	Open in IMG/M
3300026464\|Ga0256814_1027788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	654	Open in IMG/M
3300026921\|Ga0207860_1038531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300027915\|Ga0209069_10047377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2018	Open in IMG/M
3300031538\|Ga0310888_10123392	Not Available	1349	Open in IMG/M
3300031543\|Ga0318516_10392599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	800	Open in IMG/M
3300031545\|Ga0318541_10043148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2290	Open in IMG/M
3300031547\|Ga0310887_10210950	Not Available	1062	Open in IMG/M
3300031719\|Ga0306917_10413250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1054	Open in IMG/M
3300031771\|Ga0318546_10380595	Not Available	984	Open in IMG/M
3300031779\|Ga0318566_10100695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1418	Open in IMG/M
3300031779\|Ga0318566_10264952	Not Available	851	Open in IMG/M
3300031781\|Ga0318547_10300222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	975	Open in IMG/M
3300031912\|Ga0306921_10952022	Not Available	971	Open in IMG/M
3300031913\|Ga0310891_10086880	Not Available	942	Open in IMG/M
3300031938\|Ga0308175_102469292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300032039\|Ga0318559_10065858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1550	Open in IMG/M
3300032044\|Ga0318558_10140286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1158	Open in IMG/M
3300032829\|Ga0335070_10726333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	927	Open in IMG/M
3300032829\|Ga0335070_10946893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	796	Open in IMG/M
3300032893\|Ga0335069_10627439	Not Available	1230	Open in IMG/M
3300032893\|Ga0335069_12284992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300032897\|Ga0335071_10784527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	902	Open in IMG/M
3300033809\|Ga0314871_000761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1480	Open in IMG/M
3300033809\|Ga0314871_010289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	678	Open in IMG/M
3300033810\|Ga0314872_024695	Not Available	553	Open in IMG/M
3300034820\|Ga0373959_0019456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1287	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.09%
Host-Associated	Host-Associated	20.00%
Engineered	Engineered	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.82%
Plants	Host-Associated → Plants	20.00%
Aquatic	Environmental → Aquatic	7.27%
Solid Waste	Engineered → Solid Waste	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.00%
Sediment	Environmental → Aquatic → Sediment	5.45%
Freshwater	Environmental → Aquatic → Freshwater	1.82%
Grass	Engineered → Solid Waste → Grass	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.45%
Loam	Environmental → Terrestrial → Soil → Loam	14.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.64%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.82%
Composting	Engineered → Solid Waste → Grass → Composting	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.18%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.73%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.82%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.91%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.09%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.36%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.73%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.91%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005160	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012473	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.12.yng.090610	Host-Associated	Open in IMG/M
3300012483	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610	Host-Associated	Open in IMG/M
3300012497	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510	Host-Associated	Open in IMG/M
3300012503	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R	Host-Associated	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025735	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026464	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS5	Environmental	Open in IMG/M
3300026921	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 28 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033809	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_D	Environmental	Open in IMG/M
3300033810	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_E	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwBSRL2_0639.00003370	2162886013	Switchgrass Rhizosphere	MRILTIALSAAFLALPFAAPVHACEAGLHTKAAVTDYSAAKKKKAKKPKEKVEYMRAAPM
INPgaii200_04972562	2228664022	Soil	MRILTIALSAAFLALPFAAPVHAREAGLHAKSAVTDYSAAKKKKAKNPKEKVEYMRAAPM
ICChiseqgaiiDRAFT_08125753	3300000033	Soil	MRILTIAIAAAFLAXPFAXTAKACGAXGKHSXKAATADYSAAKKKTKKQKEKVEYMRAAPMK*
NODE_073143612	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MRILTIALSAAFLALPFAAPVQACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
INPhiseqgaiiFebDRAFT_1056726693	3300000364	Soil	MRILTIALSAAFLALPFAAPVHAREAGLHAKSAVTDYSAAKKKKAKNPKEKVEYMRAAPMK*
AF_2010_repII_A001DRAFT_100246983	3300000793	Forest Soil	MRILMIVLSAAFLALPFXAPVXACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
JGI25614J43888_100689272	3300002906	Grasslands Soil	LFRPEKTGVTLMRVLTIALTIAFLALPATVPAQACGAAGLHSAKATTTDYSAAKKKKPKPPKEKVEYMRAAPMK*
Ga0062595_1001039403	3300004479	Soil	MRILTIALSAAFLALPFAAPVHACEAGLHTKAAVTDYSAAKKKKAKKPKEK
Ga0066395_100832301	3300004633	Tropical Forest Soil	MRILIIVLSAAFLALPFAAPVQACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0066820_10127381	3300005160	Soil	MRILTIALSAAFLALPFAAPVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0066810_100082482	3300005169	Soil	MRILTIALSAAFLALPFAAPTQACEAGVHSAKAATTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0065705_101771643	3300005294	Switchgrass Rhizosphere	MRILTIALSAAFLALPFAAPVHACEAGLHTKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0066388_1001141324	3300005332	Tropical Forest Soil	MRILAIAISAAFLAWPAMAHAQACKAVGQHFAKATTADYSAAKKKKTKKPKEKVEYMRAAPMK*
Ga0066388_1001956602	3300005332	Tropical Forest Soil	MRILTIALSAAFLALPFAAPVHACEAGLHAKATVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0066388_1010886982	3300005332	Tropical Forest Soil	MRILTIALSAAFLALPFAAPVHACEAGLHAKAAVTNYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0066388_1030388942	3300005332	Tropical Forest Soil	MRILTIALSAAFLALPIAAPLQACEAGLHSAKAAVTHYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0066388_1051533882	3300005332	Tropical Forest Soil	MRILTIALSAAFLALPFAAPVHACEAGLHAKAALTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0066388_1060051611	3300005332	Tropical Forest Soil	MRILTIALSASFLALPFAAPVQACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0070668_1010122402	3300005347	Switchgrass Rhizosphere	MRILTIALSAAFLALPFAASVQACEAGLHSAKATVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0070709_100063395	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNGVTLMRFLTIAIAVSFLALPVAGPAQACGNAGHSAKAATADYSAATKKKKPKQPKEKVEYMRAAPMK*
Ga0070710_100254814	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRFLTIAIAVSFLALPVAGPAQACGNAGHSAKAATADYSAATKKKKPKQPKEKVEYMRAAPMK*
Ga0070711_1001405813	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRFLTVAIAVSFLALPVAGPAQACGNAGHSAKAATADYSAATKKKKPKQPKEKVEYMRAAPMK*
Ga0070708_1009344172	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRILTIALSAAFLALPFAASVHACEAGLHSAKATVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0070663_1005467012	3300005455	Corn Rhizosphere	MRILTIALSAAFLALPFAGSVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0066903_1016204822	3300005764	Tropical Forest Soil	MRILAIALSAAFLTLPFAAPVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0070717_100175708	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VTLMRFLTIAIAVSFLALPVAGPAQACGNAGHSAKAATADYSAATKKKKPKQPKEKVEYMRAAPMK*
Ga0075024_1000351653	3300006047	Watersheds	MRILTIALSAAFLALPFAAPTQACEAGLHSAKAATTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0075028_1001656223	3300006050	Watersheds	MRFLTIAIAISFLTFPAVGSAQACGTAGHSAKAATADYSAATKKKKPTQKKEKVEYMRAA
Ga0075028_1004106062	3300006050	Watersheds	MGVTLMRILTIAIAAAVLALPASAPARASGGTGLHSVHVATADYSADTKKKKPPQKKEKVEYMRAAPMK*
Ga0075017_1010908101	3300006059	Watersheds	TIAIAISFLTFPAVGSAQACGTAGHSAKAATADYSAATKKKKPTQKKEKVEYMRAAPMK*
Ga0075018_101358852	3300006172	Watersheds	MRFLTIAIAISFLTFPAVGSAQACGTAGHSAKAATADYSAATKKKKPTQKKEKVEYMRAAPMK*
Ga0074056_103764522	3300006574	Soil	MRILTIALSTAFLALPFAAPVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0075425_1000626102	3300006854	Populus Rhizosphere	MRILTIALSAAFLALPFAASVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0075434_1003006051	3300006871	Populus Rhizosphere	MRILTIALSAAFLALPFAASVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYM
Ga0075424_1006875753	3300006904	Populus Rhizosphere	MRILTIALSAAFLALPFAASVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAA
Ga0075424_1025203081	3300006904	Populus Rhizosphere	MRILTIALSAAFLALPFAAPVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAA
Ga0079219_101399402	3300006954	Agricultural Soil	MRILTIALSAAFLALPFTAPVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0079219_102729103	3300006954	Agricultural Soil	PFSVAKNGVSLMRILTIALSAAFLALPFAAPVQACEGGLHSAKAAVSDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0105245_108633891	3300009098	Miscanthus Rhizosphere	NGIPLMRILTIALSAAFLALPFAAPVHACEAGLHTKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0105237_103934731	3300009545	Corn Rhizosphere	KNGVSLMRILTIALSAAFLALPFAAPVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0126380_114753662	3300010043	Tropical Forest Soil	MRILAIALSAAFLTLPFAAPVQACEGGLHSAKAAVTDYSAAKKKKANKPKEKAEYMRAAPMK*
Ga0126376_123228702	3300010359	Tropical Forest Soil	MRILTIALSASFLALPFAAPVQACEAGLHSTKAAVTDYSAAKKKKANKPKEKVEYMRAAPMK*
Ga0126376_125480501	3300010359	Tropical Forest Soil	MRILAIAISAAFLAWPGGEHAQACKALGQHFAKPTTADYSAAKKKKTKKPKEKVEYM
Ga0126378_114456561	3300010361	Tropical Forest Soil	MRILIIVLSAAFLALPFAAPVQACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRA
Ga0126379_112251902	3300010366	Tropical Forest Soil	MIVLSAAFLALPFTAPVHACEAGLHSAKAAVNDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0126379_138384202	3300010366	Tropical Forest Soil	MRILTIALSAAFLALPFAAPVHACEAGLHAKATVTDYSAAKKKKANKPKEKVEYMR
Ga0126383_100076794	3300010398	Tropical Forest Soil	MRILIIFLSAAFLALPFAAPVQACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0137391_101120242	3300011270	Vadose Zone Soil	MRVLTIPLTIAFLALPATVPAQACGAAGLHSAKATTTDYSAAKKKKPKQPKEKVEYMRAAPMK*
Ga0137389_115439912	3300012096	Vadose Zone Soil	LFRPEKTGVTLMRVLTIALTIAFLALPATVPAQACGAAGLHSAKATTTDYSAAKKKKPKQ
Ga0157340_10208781	3300012473	Arabidopsis Rhizosphere	EVSLMRILTIALSAAFLALPFAASVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0157337_10060723	3300012483	Arabidopsis Rhizosphere	SAAFLALPFAAPVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0157319_10042072	3300012497	Arabidopsis Rhizosphere	MRILTIALSAAFLALPFAASVQACEGGLHSAKDAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0157313_10080412	3300012503	Arabidopsis Rhizosphere	MRILTIALSAAFLALPFGASVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0157339_10627362	3300012505	Arabidopsis Rhizosphere	VSLMRILTIALSAAFLALPFAAPVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0164298_100009177	3300012955	Soil	MRILTIALSAAFLALPFAAPVQACEGGLHSAKAAVTDYSAAKQKKAKKPKEKVEYMRAAPMK*
Ga0164303_105071123	3300012957	Soil	ALSYLVSKNGIPLMRILKIALSAAFLALPFAAPVHACEAALHTKTAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0164302_100033642	3300012961	Soil	MRILTIALSVAFLALPFAAPVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0126369_104031393	3300012971	Tropical Forest Soil	MIVLSAAFLALPFAAPVQACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0126369_105880891	3300012971	Tropical Forest Soil	IVLSAAFLALPFAAPVQACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK*
Ga0132258_106142024	3300015371	Arabidopsis Rhizosphere	MGVTLMRILTVAVAAAFLTLPIAPPVQACGAAGLHSARTTTTDYSAATKKKSKKQKEKVEYMRAAPMK*
Ga0132257_1008929373	3300015373	Arabidopsis Rhizosphere	MRILTIALSAAFLALPFAAPVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAP
Ga0132257_1008929383	3300015373	Arabidopsis Rhizosphere	MRILTIALSAAFLALPFAASVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAP
Ga0132257_1040595941	3300015373	Arabidopsis Rhizosphere	MGVTLMRILTVAVAAAFLTLPIAPPVQACGAAGLHSAKTTTTDYSAATKKKTKKQKEKVEYMRAAPMK*
Ga0182036_103897352	3300016270	Soil	MRILMIVLSAAFLALPFTAPVHACEAGLHSAKATVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0182034_100027741	3300016371	Soil	GVPLMRILMIVLSAAFLALPFTAPVHACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0187821_102833232	3300017936	Freshwater Sediment	MRVLTIAIAAAFLAMPATAPAQACGAGLHTAKSMSADYSAKKKKKVKAPKEKVEYMRAAPMK
Ga0187786_100846901	3300017944	Tropical Peatland	MNGVTLMRILAIAIAVSFLALPIAGPAQACGTAGHSAKAATTDYSAATKKKKPKQPKEKVEYMRAAPMK
Ga0187786_105702292	3300017944	Tropical Peatland	MRILTIAVVAAFLALPVSTSVQACGTGGLPSAKAATADYSAATKKKKAKKEKVEYMRAAPMK
Ga0187785_100031685	3300017947	Tropical Peatland	MRVLTIAIVAAFLALPATASVQACGTAGLHSAKTATTDYSAAKKKKAKKEKVEYMRAAPM
Ga0187785_100162384	3300017947	Tropical Peatland	MNGVILMRFLAIAIALSFLALPVAGPAQACGNAGQHAAKATTADYSAATKKKKPKQPKEKVEYMRAAPMK
Ga0187785_100185472	3300017947	Tropical Peatland	MRILTIALSAAFLALPFAAPLQACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0187785_100362423	3300017947	Tropical Peatland	MRILAIALSATFLALPFAAPVQACEAGHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPM
Ga0187785_101909442	3300017947	Tropical Peatland	MNGVTLMRFLTIAIALSFLALPVAGPAQACGAGHSAKAATADYSAATKKKKPKQPKEKVEYMRAAPMK
Ga0187779_112847891	3300017959	Tropical Peatland	IAFSAAFLALPFAAPVQACEAGHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0187765_101709162	3300018060	Tropical Peatland	MRILAIALSAAFLALPFTAPVQACEAGHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPM
Ga0126371_102337113	3300021560	Tropical Forest Soil	MRILMIVLSAAFLALPFTAPVHACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0207713_11804222	3300025735	Switchgrass Rhizosphere	MRILTIALSAAFLALPFAGSVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0207647_103441911	3300025904	Corn Rhizosphere	IALSAAFLALPFAASVQACEAGLHSAKATVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0207685_106519002	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MRILTIALSAAFLALPFAAPVHACEAGLHTKAAVTDYSAAKKKKAKKPKEKV
Ga0207663_100331864	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRFLTIAIAVSFLALPVAGPAQACGNAGHSAKAATADYSAATKKKKPKQPKEKVEYMRAAPMK
Ga0207690_113357042	3300025932	Corn Rhizosphere	VSLMRILTIALSAAFLALPFAAPVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0207704_101685832	3300025938	Miscanthus Rhizosphere	MRILTIALSAAFLALPFAASVQACEAGLHSAKATVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0209240_12657261	3300026304	Grasslands Soil	MRVLTIALTIAFLALPATVPAQACGAAGLHSAKATTTDYSAAKKKKPKQPKEKVEYMRAA
Ga0209647_10069783	3300026319	Grasslands Soil	LFRPEKTGVTLMRVLTIALTIAFLALPATVPAQACGAAGLHSAKATTTDYSAAKKKKPKPPKEKVEYMRAAPMK
Ga0256814_10277883	3300026464	Sediment	ILTIATAATFLTLPAFMPAQACSTAGLRSAKAATADYSAAKKKKKAKNEKVEYMRAAPMK
Ga0207860_10385311	3300026921	Tropical Forest Soil	AVAFLGLPAATSAQACGNAGLHSAKAAAVDYSAATKKKKTSKPKEKVEYMRAAPMK
Ga0209069_100473773	3300027915	Watersheds	MRILTIALSAAFLALPFAAPTQACEAGLHSAKAATTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0310888_101233924	3300031538	Soil	MRILTIALSAAFLALPFAASVQACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0318516_103925992	3300031543	Soil	PVSKNGVPLMRILMIVLSAAFLALPFTAPVHACEAGLHSAKATVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0318541_100431482	3300031545	Soil	MRILMIVLSAAFLALPFIAPVHACEAGLHSAKATVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0310887_102109503	3300031547	Soil	MRILTIALSAAFLALPFAASVQACEGGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0306917_104132502	3300031719	Soil	MIVLSAAFLALPFIAPVHACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0318546_103805952	3300031771	Soil	MRILMIVLSAAFLALPFTAPVHACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYM
Ga0318566_101006953	3300031779	Soil	VLSATFLALPFTAPVHACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0318566_102649522	3300031779	Soil	MRILMIVLSAAFLALPFTAPVHACEAGLHSAKAAVTDYSAAKKKKAKKPKEK
Ga0318547_103002222	3300031781	Soil	MRILMIVLSAAFLALPFIAPVHACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0306921_109520222	3300031912	Soil	MIVLSAAFLALPFIAPVHACEAGLHSAKATVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0310891_100868802	3300031913	Soil	MRILTIALSAAFLALPFAASVQACEAGLHSAKATVTDYSAAKKKKAKKPKEKVEYMRAAP
Ga0308175_1024692922	3300031938	Soil	MRFLTIAIALSFLAVPVAGPAQACGTGAHAAKATTADYSAATKKKKPKQPKEKVEYMRAAPMK
Ga0318559_100658582	3300032039	Soil	MHILMIALSAAFLALPFTAPVHACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0318558_101402862	3300032044	Soil	MIVLSAAFLALPFTAPVHACEAGLHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK
Ga0335070_107263332	3300032829	Soil	MGVTLMRFLTIAIALSFLALPATVPAQACGTAGHSAKAATADYSAATKKKKPKQPKEKVEYMRAAPMK
Ga0335070_109468932	3300032829	Soil	MRILTIAIAVTFLGLPAATSAQACGNAGLHSAKAAAVDYSAATKKKKPSKPKEKVEYMRAAPMK
Ga0335069_106274392	3300032893	Soil	MRALSIAIAITFLGLPATMSAQACGNAGLHSAKAAAVDYSAATKKKKASKPKEKEEYMRAAPMK
Ga0335069_122849922	3300032893	Soil	QSKKMEVALMRILTIAIAVTFLGLPAATSAQACGNAGLHSAKAAAVDYSAATKKKKPSKPKEKVEYMRAAPMK
Ga0335071_107845273	3300032897	Soil	RPKKWVTLMRALSIAIAITFLGLPATMSAQACGNAGLHSAKAAAVDYSAATKKKKASKPKEKEEYMRAAPMK
Ga0314871_000761_506_715	3300033809	Peatland	MEVALMRILTIAIAVTFLGLPAATSAQACGNAGLHSAKAAAVDYSAATKKKKPSKPKEKVEYMRAAPMK
Ga0314871_010289_510_677	3300033809	Peatland	IAVSFLALPVAGPAQACGAGHSAKAATADYSAATKKKKPKQPKEKVEYMRAAPMK
Ga0314872_024695_2_193	3300033810	Peatland	MNGVILMRFLAIAIALSFLALPVAGPAQACGNAGQHAAKATTADYSAATKKKKPKQPKEKVEYM
Ga0373959_0019456_269_457	3300034820	Rhizosphere Soil	MRILTIALSAAFLALPFAASVQACEGGQHSAKAAVTDYSAAKKKKAKKPKEKVEYMRAAPMK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087703

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences