Metagenome Family F087395

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087395
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	113 residues
Representative Sequence	VSPELHLPVFLAAVVALQGLLTLWSYRASGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Number of Associated Samples	50
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	58.18 %
% of genes near scaffold ends (potentially truncated)	37.27 %
% of genes from short scaffolds (< 2000 bps)	88.18 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.455 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (38.182 % of family members)
Environment Ontology (ENVO)	Unclassified (42.727 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (67.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.92% β-sheet: 0.00% Coil/Unstructured: 29.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00571	CBS	20.91
PF13742	tRNA_anti_2	10.00
PF01676	Metalloenzyme	8.18
PF14321	DUF4382	5.45
PF10143	PhosphMutase	2.73
PF00085	Thioredoxin	1.82
PF00795	CN_hydrolase	0.91
PF00271	Helicase_C	0.91
PF13276	HTH_21	0.91
PF13006	Nterm_IS4	0.91
PF00348	polyprenyl_synt	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0142	Geranylgeranyl pyrophosphate synthase	Coenzyme transport and metabolism [H]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
All Organisms	root	All Organisms	44.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
cellular organisms	root	All Organisms → cellular organisms	44.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.27 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.73 %
Thermodesulfobacteria	phylum	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria	0.91 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.73 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.82 %
Thermodesulfobacteria	class	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria	0.91 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2.73 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.82 %
Thermodesulfobacteriales	order	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales	0.91 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	2.73 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.82 %
Thermodesulfobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales → Thermodesulfobacteriaceae	0.91 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.73 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.82 %
Thermodesulfatator	genus	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales → Thermodesulfobacteriaceae → Thermodesulfatator	0.91 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.73 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.82 %
unclassified Thermodesulfatator	no rank	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales → Thermodesulfobacteriaceae → Thermodesulfatator → unclassified Thermodesulfatator	0.91 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.73 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.82 %
Thermodesulfatator sp.	species	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales → Thermodesulfobacteriaceae → Thermodesulfatator → unclassified Thermodesulfatator → Thermodesulfatator sp.	0.91 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_106924390	Not Available	660	Open in IMG/M
3300005795\|Ga0079491_102092	All Organisms → cellular organisms → Bacteria → Proteobacteria	4949	Open in IMG/M
3300005833\|Ga0074472_11160440	Not Available	527	Open in IMG/M
3300006224\|Ga0079037_100241242	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300006224\|Ga0079037_102316358	Not Available	536	Open in IMG/M
3300009091\|Ga0102851_10622360	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300009091\|Ga0102851_11285325	Not Available	808	Open in IMG/M
3300009091\|Ga0102851_13111352	Not Available	533	Open in IMG/M
3300009111\|Ga0115026_10961323	Not Available	680	Open in IMG/M
3300009111\|Ga0115026_11209765	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300009131\|Ga0115027_10364313	Not Available	997	Open in IMG/M
3300009131\|Ga0115027_10895845	Not Available	685	Open in IMG/M
3300009131\|Ga0115027_11034394	Not Available	646	Open in IMG/M
3300009131\|Ga0115027_11374024	Not Available	573	Open in IMG/M
3300009131\|Ga0115027_11777821	Not Available	515	Open in IMG/M
3300009179\|Ga0115028_10794618	Not Available	736	Open in IMG/M
3300009179\|Ga0115028_11588525	Not Available	559	Open in IMG/M
3300009506\|Ga0118657_10030640	All Organisms → cellular organisms → Bacteria → Proteobacteria	8417	Open in IMG/M
3300011007\|Ga0139299_1001537	All Organisms → cellular organisms → Bacteria	3111	Open in IMG/M
3300011007\|Ga0139299_1001690	All Organisms → cellular organisms → Bacteria → PVC group	3126	Open in IMG/M
3300011007\|Ga0139299_1019092	All Organisms → cellular organisms → Bacteria	1895	Open in IMG/M
3300011007\|Ga0139299_1075806	Not Available	737	Open in IMG/M
3300011410\|Ga0137440_1119197	Not Available	540	Open in IMG/M
3300011428\|Ga0137456_1181816	Not Available	568	Open in IMG/M
3300012675\|Ga0137337_1078992	Not Available	516	Open in IMG/M
3300013232\|Ga0170573_10834320	Not Available	729	Open in IMG/M
3300013315\|Ga0173609_10634940	Not Available	633	Open in IMG/M
3300013315\|Ga0173609_10740676	All Organisms → cellular organisms → Bacteria	1977	Open in IMG/M
3300013315\|Ga0173609_10849635	Not Available	607	Open in IMG/M
3300014502\|Ga0182021_10625020	Not Available	1290	Open in IMG/M
3300015254\|Ga0180089_1006946	All Organisms → cellular organisms → Bacteria → Proteobacteria	1903	Open in IMG/M
3300027890\|Ga0209496_10513391	Not Available	638	Open in IMG/M
3300027899\|Ga0209668_10042584	All Organisms → cellular organisms → Bacteria	2402	Open in IMG/M
3300027900\|Ga0209253_10034059	All Organisms → cellular organisms → Bacteria	4262	Open in IMG/M
3300027900\|Ga0209253_10393795	Not Available	1054	Open in IMG/M
3300027900\|Ga0209253_10835420	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300031539\|Ga0307380_10347696	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1356	Open in IMG/M
3300031834\|Ga0315290_10198321	All Organisms → cellular organisms → Bacteria	1744	Open in IMG/M
3300031873\|Ga0315297_10651694	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300031997\|Ga0315278_10641655	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300032018\|Ga0315272_10205511	Not Available	939	Open in IMG/M
3300032053\|Ga0315284_12378093	Not Available	521	Open in IMG/M
3300032143\|Ga0315292_10481436	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300032143\|Ga0315292_10704687	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300032156\|Ga0315295_11880262	Not Available	566	Open in IMG/M
3300032164\|Ga0315283_10436848	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300032173\|Ga0315268_10316522	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300032177\|Ga0315276_11105253	Not Available	839	Open in IMG/M
3300032177\|Ga0315276_11837616	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300032256\|Ga0315271_10010589	All Organisms → cellular organisms → Bacteria → Proteobacteria	6087	Open in IMG/M
3300032256\|Ga0315271_10026513	Not Available	4022	Open in IMG/M
3300032256\|Ga0315271_10702795	Not Available	868	Open in IMG/M
3300032256\|Ga0315271_10849685	Not Available	787	Open in IMG/M
3300032256\|Ga0315271_11098785	Not Available	687	Open in IMG/M
3300032256\|Ga0315271_11263550	Not Available	638	Open in IMG/M
3300032256\|Ga0315271_11850997	Not Available	517	Open in IMG/M
3300032275\|Ga0315270_10421656	Not Available	853	Open in IMG/M
3300032275\|Ga0315270_11165203	Not Available	513	Open in IMG/M
3300032342\|Ga0315286_11152992	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300032397\|Ga0315287_10193784	All Organisms → cellular organisms → Bacteria	2369	Open in IMG/M
3300032397\|Ga0315287_10819707	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300032397\|Ga0315287_11043811	Not Available	949	Open in IMG/M
3300032401\|Ga0315275_10617999	Not Available	1210	Open in IMG/M
3300032516\|Ga0315273_12072284	Not Available	673	Open in IMG/M
3300033233\|Ga0334722_10002629	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	20046	Open in IMG/M
3300033233\|Ga0334722_10037464	All Organisms → cellular organisms → Bacteria	3935	Open in IMG/M
3300033233\|Ga0334722_10038655	All Organisms → cellular organisms → Bacteria	3861	Open in IMG/M
3300033408\|Ga0316605_11459705	Not Available	664	Open in IMG/M
3300033408\|Ga0316605_12125743	Not Available	546	Open in IMG/M
3300033413\|Ga0316603_10703285	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales → Thermodesulfobacteriaceae → Thermodesulfatator → unclassified Thermodesulfatator → Thermodesulfatator sp.	944	Open in IMG/M
3300033413\|Ga0316603_11897819	Not Available	564	Open in IMG/M
3300033416\|Ga0316622_100035901	All Organisms → cellular organisms → Bacteria	4513	Open in IMG/M
3300033416\|Ga0316622_100256782	All Organisms → cellular organisms → Bacteria	1899	Open in IMG/M
3300033416\|Ga0316622_100556929	Not Available	1314	Open in IMG/M
3300033416\|Ga0316622_103318871	Not Available	508	Open in IMG/M
3300033418\|Ga0316625_102758819	Not Available	502	Open in IMG/M
3300033419\|Ga0316601_101501547	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	678	Open in IMG/M
3300033482\|Ga0316627_100229481	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300033482\|Ga0316627_100592980	All Organisms → cellular organisms → Bacteria → Proteobacteria	1007	Open in IMG/M
3300033482\|Ga0316627_101250340	Not Available	737	Open in IMG/M
3300033482\|Ga0316627_101632185	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300033482\|Ga0316627_102116360	Not Available	586	Open in IMG/M
3300033482\|Ga0316627_102193735	Not Available	577	Open in IMG/M
3300033482\|Ga0316627_102729929	Not Available	524	Open in IMG/M
3300033482\|Ga0316627_102960720	Not Available	505	Open in IMG/M
3300033483\|Ga0316629_10658401	Not Available	787	Open in IMG/M
3300033483\|Ga0316629_11404471	Not Available	565	Open in IMG/M
3300033485\|Ga0316626_11409174	Not Available	626	Open in IMG/M
3300033488\|Ga0316621_10584166	Not Available	793	Open in IMG/M
3300033488\|Ga0316621_10761519	Not Available	705	Open in IMG/M
3300033488\|Ga0316621_10980761	Not Available	629	Open in IMG/M
3300033488\|Ga0316621_11249453	Not Available	563	Open in IMG/M
3300033488\|Ga0316621_11587960	Not Available	504	Open in IMG/M
3300033521\|Ga0316616_100553584	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300033521\|Ga0316616_100825556	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300033521\|Ga0316616_100879619	All Organisms → cellular organisms → Bacteria → Proteobacteria	1102	Open in IMG/M
3300033521\|Ga0316616_101044592	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300033521\|Ga0316616_101272782	Not Available	940	Open in IMG/M
3300033521\|Ga0316616_101294327	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300033521\|Ga0316616_101694882	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300033521\|Ga0316616_101820822	Not Available	801	Open in IMG/M
3300033521\|Ga0316616_102083413	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	753	Open in IMG/M
3300033521\|Ga0316616_102454155	Not Available	698	Open in IMG/M
3300033557\|Ga0316617_100480726	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300033557\|Ga0316617_100637044	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300033557\|Ga0316617_100711077	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300033557\|Ga0316617_101135961	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300033557\|Ga0316617_101487888	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	683	Open in IMG/M
3300033557\|Ga0316617_102698272	Not Available	517	Open in IMG/M
3300034147\|Ga0364925_0069996	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.36%
Engineered	Engineered	3.64%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	55.45%
Terrestrial	Environmental → Terrestrial	40.91%
Wastewater	Engineered → Wastewater	3.64%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	49.09%
Soil	Environmental → Terrestrial → Soil	40.00%
Sediment	Environmental → Aquatic → Sediment	4.55%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	3.64%
Marine	Environmental → Aquatic → Marine	1.82%
Floodplain	Environmental → Terrestrial → Floodplain	0.91%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	39.09%
Lake	Environmental → Aquatic → Freshwater → Lake	27.27%
Sediment	Environmental → Aquatic → Freshwater → Sediment	10.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.55%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.64%
Ice	Environmental → Aquatic → Freshwater → Ice	3.64%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	3.64%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.82%
Clay	Environmental → Terrestrial → Soil → Clay	0.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	38.18%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	27.27%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	10.00%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.55%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.64%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	3.64%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	3.64%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.91%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	38.18%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	27.27%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	9.09%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	4.55%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.64%
Basal Ice	Environmental → Aquatic → Freshwater → Ice → Glacier → Basal Ice	3.64%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.64%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	2.73%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.91%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.91%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.91%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.91%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.91%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.91%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300005795	Subglacial sediment microbial community from Lake Whillans, Antarctica - at 4-6 cm depth	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300011007	Basal ice microbial communities from Matanuska glacier, Alaska, USA - MataB	Environmental	Open in IMG/M
3300011410	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT222_2	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300012675	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT333_2	Environmental	Open in IMG/M
3300013232	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA ? S1	Engineered	Open in IMG/M
3300013315	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1B	Engineered	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1069243902	3300001213	Wetland	VSPELHLPVFLAAVVAMQGLLTLWSYRLSGSTPTALLVALLPAVGLPYQLWQVRARLVDNHVAGALTYLALVAACFGFYLLEPADETPWMLIHTMAIFAFLGMANVLGTRLKD*
Ga0079491_1020923	3300005795	Sediment	VNPELHLPIFLSAFVALQGLFTLWSYRTSGSAPTALLVGLLPLVGLPYQLWQLRARLFDNHIAGMITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKE*
Ga0074472_111604401	3300005833	Sediment (Intertidal)	LLTLWSYRTSGSAPIALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPSDETPWMLIHTMAIFAFLGTANVIGTSLKD*
Ga0079037_1002412422	3300006224	Freshwater Wetlands	MSPELHLPVFLAALVAMQGLLTLWSYRASGSTSTALLVGLLPPVGIPYQLWLLRAQLFDNHIAGALTYLALIAACLGFYFLMPPDETPWMLIHTMAGFAFLGTANVVGTSLKK*
Ga0079037_1023163582	3300006224	Freshwater Wetlands	MSPGLHLAIFLAAVGAMQALVALWSHRVSGSTPTTLLIALLPPVGLPYLLWTLRKRLLDNHVAGAITYLALVGACFSFYFYYRIWMPDDDQPWKLIHTMVIFGFLGQANLVGTRLKD*
Ga0102851_106223602	3300009091	Freshwater Wetlands	MSPELHLPVFLAALVAMQGLLTLWSYRTSGSTSTALLVGLLPPVGIPYQLWLLRTRLLDNHIAGALTYLALIAACLGFYFLMPPDETPWMLIHTMAAFAFLGTANLV
Ga0102851_112853252	3300009091	Freshwater Wetlands	VFLAALVAMQGLLTLWSYRASGSTSTAQLVGLLPPVGIPYQLWLLRAQLFDNHIAGALTYLALIAACLGFYFLMPPDETPWMLIHTMAGFAFLGTANVVGTSLKK*
Ga0102851_131113521	3300009091	Freshwater Wetlands	VNPELHLPVFLASVVAMQGLLTLWSYRVSGSTSTALLVGLLPAVGLPYQLWQLRSRLVDNHVAGALSYIALVGACFGFYLLQPPDETPWMLIHTMATFAF
Ga0115026_109613231	3300009111	Wetland	MSPELHLPVFLAALVAMQGLLTLWSYRTSGSTSTALLVGLLPPVGIPYQLWLLRARLLDNHIAGALTYLALIAACLGFYFLMPPDETPWMLIHTMAAFAFLGTANLVGTSLKQ*
Ga0115026_112097652	3300009111	Wetland	VSPELHLPVFLAAIVAMQGLLTLWSLRASGSMPTALLVGLLPLIGLPYQLWQLRVRLVDNHVAGAVTYLALLAACFGFYILMPADETPWMLIH
Ga0115027_103643131	3300009131	Wetland	LNPELHLPIFLAAFVALQGLLTLWSYRTSGSAPIALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALISACFGFYFLMPADETPWMLIHTMAIFSFLGTANVIGTNLKD*
Ga0115027_108958452	3300009131	Wetland	VNPELHLPVFLAAFVALQVLLTIWSYRTSGSAPTALLVALLPLVGLPYQLWQLRPRLVDNHIAGAITYLSLITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD*
Ga0115027_110343941	3300009131	Wetland	VSPELNLPVFLAAIVAMQGLLTLWSVRASGSTSTALLVGLLPLVGIPYQLWQLRARLVDNHIAGAITYLALVAACFGFYFFYLFTAADETPWMLIHTMAGFAFLGNANLIGTRLKD*
Ga0115027_113740241	3300009131	Wetland	RMSPELHLPVFLSALVAMQGLLTLWSYRASGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD*
Ga0115027_117778211	3300009131	Wetland	VSPELHLPLFLGAFVLLQGLLTLWSYRASGSAPTALLVALLPPVGLPYQLWQLRTRLFDNHIAGATTYLALLTACFGFYLLMPADETPWMLIHTMAIFAFLGTANVIGTRLKE*
Ga0115028_107946181	3300009179	Wetland	VSPELNLPVFLAAIVAMQGLLTLWSVRASGSTPTALLVGLLPPVGIPYQLWQLRARLVDNHVAGAITYLALVAACFGFYFFYLFTAADETPWMLIHTMAGFAFLGNANLIGTRLKD*
Ga0115028_115885251	3300009179	Wetland	VSPELHLPVFLAAIVAMQGLLTLWSLRASGSMSTALLVGLLPLIGLPYQLWQLRARLVDNHVAGAVTYLALLAACFGFYFLMPADETPWMLIHTMALFAFLGNANIIGTRLKD*
Ga0118657_100306403	3300009506	Mangrove Sediment	MSPGLHLAIFLASFASMQAMLAAWSWRVTGSPPMALLVALLPPVGLPYQLWQLRRRLLDNHVAGAVTYLGLLVASFAFYFAYPADEVPWTVILTMAIFAFLGSANVVATRLRD*
Ga0139299_10015373	3300011007	Basal Ice	MSPQLHLPLFLAAFVALQGLLTRWSYRTSGSAPTALLVALLPLLGLPYQLWQLRSRLLDNHIAGAITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD*
Ga0139299_10016902	3300011007	Basal Ice	MSPELHLPIFLAAFVSLQGLLTLWSYRTSGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYLLMPADETPWMLIHTMAIFAFLGTANVIGTGLKD*
Ga0139299_10190923	3300011007	Basal Ice	LSAELHLPIFLAAFVALQVLLTLWSYRTSGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALFTACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD*
Ga0139299_10758062	3300011007	Basal Ice	VNPELHLPIFIAAFVALQLLLTLWSYRTSGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALLTACFGFYFLMPDDETPWMLIHTMAIFAFLGTANVIGTSLKD*
Ga0137440_11191971	3300011410	Soil	VSPELHLPVFLSAIVAMQGLVSLWSYRTSGSTPTALLVALFPVVGLPYQLWQLRARLVDNHIAGAVTYLALVVACFGFYFRMPADETPWMLIHTMAIFAFIGTANLIGTQLKD*
Ga0137456_11818161	3300011428	Soil	VSPELHLPVFLSAIVAMQGLVSLWSYRTSGSTPTALLVALLPVVGLPYQLWQLRSRLFDNHIAGAITYLALISACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTALKE*
Ga0137337_10789921	3300012675	Soil	LTLWSYRASGSASTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTVTYLALITACFGFYFLMPADETPWMLIHTMTIFAFLGTANVVGTSLKD*
Ga0170573_108343202	3300013232	Sediment	VNPELHLPVFLAAFAALQGLLTFWSYRASGSASTSLLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGAANVIGTSLKD*
Ga0173609_106349401	3300013315	Sediment	VNPELHLPVFLAAFAALQGLLTFWSYRASGSASTSLLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVLGTSLKE*
Ga0173609_107406763	3300013315	Sediment	VNPELHLPIFLAAFVALQVLLTLWSYRTSGSAPNALLVALLPLVGLPLQLWQLRSRLYDNHIAGAITDLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD*
Ga0173609_108496351	3300013315	Sediment	PAMNPELHLPIFLAAFVALQGLLALWSYRTSGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD*
Ga0182021_106250202	3300014502	Fen	MSPELHLPIFLSAFVVLQGLLTFWSYRVSGSVSTALLVALLPPVGIPYQLWQLRSRLFDNHIAGAITYLALITSCFGFYFLTPADETPWMLIHTMAIFAFLGTANVIGTRLKD*
Ga0180089_10069461	3300015254	Soil	LEPAPRGLPGHGAPPMNPELHLPIFLAAFVALQGLLTLWSFRTSGSAPTALRVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTNLKD*
Ga0209496_105133911	3300027890	Wetland	VSPELNLPVFLAAIVAMQGLLTLWSVRASGSTPTALLVGLLPLVGIPYQLWQLRARLVDNHIAGAITYLALVAACFGFYFFYLFTAADETPWMLIHTMAGFAFLGNANLIGTRLKD
Ga0209668_100425843	3300027899	Freshwater Lake Sediment	VNPELHLPIFLAAFVALQGLLTLWSYRTSGSAPTALLVALLPLVGLPYQFWQLRSRLFDNHIAGMITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLRD
Ga0209253_100340596	3300027900	Freshwater Lake Sediment	VSPELHLPVFLASIVAMQGLLTLWSLRASGSTPTALLVGLLPPIGVPYQLWQLRARLVDNHVAGAVTYLALVAACFGFYFLMPADETPWMLIHTMAIFAFLGNANLIGTRLKN
Ga0209253_103937952	3300027900	Freshwater Lake Sediment	VNPELHLSIFLAAFVALQILLTIWSYRTSGSAPIALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALLTACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLRD
Ga0209253_108354202	3300027900	Freshwater Lake Sediment	MNPEVHLPVFLASFVVLQGLLTFWSYRTSGSISTALLVALLPLVGLPYQLWLLRSRLFDNHIAGTITYLALITCCFGFYFLTPADETPWMLIHTMAAFAFLGNANLIGTRLKN
Ga0307380_103476962	3300031539	Soil	MNPEFHLPVFLASFAAMQGMLTLWSWRTGGSPPTALLVSLLPVVGLPYQLWQLRRRLVDNHVAGAITYLALIVAGFSFYLFYPADETPWTVIHTMAIFAFLGSANLVATPLKD
Ga0315290_101983212	3300031834	Sediment	LSPELHLPVFLSAVVALQGLLTLWSYRTSGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315297_106516942	3300031873	Sediment	VNPELHLPIFLAAFVALQILLTLWSYRTSGSAPIALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPSDETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315278_106416551	3300031997	Sediment	VNPELHLPIFLAAFVALQILLTLWSYRTSGSAPIALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPSDETPWMLIHTMAIFA
Ga0315272_102055111	3300032018	Sediment	EGRAGTEGTRCPAPAGRRGMSPELHLPVFLTAFVALQALLAFWSYRASSSASTALLVALLPLVGLPYQLWLLRPRLFDNHIAGAITYLSLMTACFGFYALMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315284_123780932	3300032053	Sediment	LSPELHLPVFLTAVVALQGLLTLWSYRTSGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315292_104814362	3300032143	Sediment	LSPELHLPVFLAAVVALQGLLTLWSYRTSGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315292_107046871	3300032143	Sediment	VNPELHLPIFLASFVALQGLLTLWSYRTSGSAPTALLVALLPPVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTAN
Ga0315295_118802622	3300032156	Sediment	LKPAPRGLPGPGAPPLSPELHLPVFLSAVVALQGLLTLWSYRTSGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315283_104368482	3300032164	Sediment	MSPELHLPIFLAAFVALQGLLTLWSYRTSGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHVAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315268_103165223	3300032173	Sediment	VNPELHLPIFLAAFVALQALLALWSYRASGSAPTALLVALLPPVGLPYQLWQLRTRLFDNHIAGTITYLALITACFGFYFLKPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315276_111052532	3300032177	Sediment	LTLWSYRSSGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHVAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315276_118376162	3300032177	Sediment	LSPELHLPVFLAAVVALQGLLTLWSYRASGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTM
Ga0315271_100105893	3300032256	Sediment	MSPELHLPIFLAAFVALQGLLTLWSYRTSGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315271_100265134	3300032256	Sediment	MSPELHLPVFLTAFVALQALLAFWSYRASSSASTALLVALLPLVGLPYQLWLLRPRLFDNHIAGAITYLSLMTACFGFYALMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315271_107027952	3300032256	Sediment	MNPELHLPIFLAAFVALQGLLTLWSYRASGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315271_108496851	3300032256	Sediment	VSPELHLPVFLAAFVSLQALLTVWSYRTSGSAPTALLVALLPLVGLPYQLWQLRSRVFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315271_110987851	3300032256	Sediment	LLALWSYRTSGSAPTALLVALLPPVGLPYQLWQLRPRVLDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315271_112635501	3300032256	Sediment	VNPELHLPIFLAAFAALQGLLTLWAYRASGSAPTALLVALLPLVGLPYQLWQLRARLFDNHIAGAVTYLALITSCFGFYFLMPADETPWMLIHTMAILAFLGTANVIGTSLKD
Ga0315271_118509971	3300032256	Sediment	LSPELHLPVFLSAVVALQGLLTLWSYRTSGSAPTALLVALLPLVGLPYQLWQLRTRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMA
Ga0315270_104216561	3300032275	Sediment	VNPELHLPIFLAAYVALQGLFALWTYRTSNSAPTTLLVALLPLVGIPYLLRLLRLRLFDNHIAGAITYLALMSACFGFYLLMPADERPWMVIHTMAIFAFLGTANVIGTRLKD
Ga0315270_111652031	3300032275	Sediment	MSPELHLPIFLAAFVALQGLLTLWSFRTSGSRSTALLVALLPPVGLPYQLWLLRARLFDNHIAGTITYLALITACFGFYFLTPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315286_111529922	3300032342	Sediment	LSPELHLPVFLSAVVALQGLLTLWSYRASGSAPTALLVALLPLVGLPYQLWQLRTRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315287_101937843	3300032397	Sediment	VNPELHLPIFLASFVALQGLLTLWSYRTSGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPSDETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315287_108197072	3300032397	Sediment	LSPELHLPVFLSAVVALQGLLTLWSYRTSGSAPTALLVALLPLVGLPYQLWQLRTRLFDNHIAGTITYLALITACFGFYLLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315287_110438112	3300032397	Sediment	PVFLAAVVALQGLLTLWSYRTSGSAPTALLVALLPLVGLPYQLWQLRTRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTRLKD
Ga0315275_106179992	3300032401	Sediment	PELHLPVFLSAVVALQGLLTLWSYRTSGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0315273_120722842	3300032516	Sediment	MSPELHLPIFLAAFVALQGLLTLWSYRSTGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0334722_100026293	3300033233	Sediment	MSPELHPPLFLAAFVLLQGLLTLWSYRAGGSAATALLVALVPLVGLPYQLWRLRPRVFDNHVAGAVTYLALLITCFGFYFLSPADETPWMLIHTMTIFAFLGTANVIGTNLKP
Ga0334722_100374641	3300033233	Sediment	MNPELHLPIFLAAFVALQILLTLWSYRASGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTISYLALMTACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0334722_100386553	3300033233	Sediment	VSPELHLPLFLAAFVALQGLLTLWSYRASGSAPIALLVALLPPVGLPYQLWQLRPRLFDNHIAGATTYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0316605_114597051	3300033408	Soil	CPVSPELNLPVFLAAVVAMQGLLTLWSLRSSGSTPTALLVGLLPLVGLPYQLWQLRARLVDNHIAGAITYLALVAACFGFYFLEPADETPWMLIHTMAGFAFLGNANLIGTRLKD
Ga0316605_121257432	3300033408	Soil	MSPELHLPVFLAALVAMQGLLTLWSYRASGSTSTALLVGLLPLVGIPYQLWLLRARLFDNHIAGAVTYLALIAACLGFYFLMPPDETPWMLIHTMAAFAFLGTAN
Ga0316603_107032851	3300033413	Soil	MSPELHLPVFLAALVAMQGLLTLWSYRASGSTSTALLVGLLPPVGIPYQLWLLRAQLFDNHIAGALTYLALIAACLGFYFLMPPDETPWMLIHTMAGFAFLGTANVV
Ga0316603_118978191	3300033413	Soil	VSPELNLPVFLAAVVAMQGLLTLWSLRSSGSTPTALLVGLLPLVGLPYQLWQLRARLVDNHIAGAITYLALVAACFGFYFLEPADETPWMLIHTMAAFAFLGNANLIGTRLKD
Ga0316622_1000359016	3300033416	Soil	MSPELHLPVFLAALVAMQGLLTLWSYRASGSTSTALLVGLLPPVGIPYQLWLLRAQLFDNHIAGALTYLALIAACLGFYFLMPPDETPWMLIHTMAGFAFLGT
Ga0316622_1002567822	3300033416	Soil	MSPGLHLAIFLAAVGAMQALVALWSHRVSGSTPTTLLIALLPPVGLPYLLWTLRKRLLDNHVAGAITYLALVGACFSFYFYYRIWMPDDDQPWKLIHTMVIFGFLGQANLVGTRLKD
Ga0316622_1005569292	3300033416	Soil	MQGLLTLWSLRASGSMPTALLVGLLPLVGLPYQLWQLRSRLVDNHIAGAITYLSLVAACIGFYFYYRIWMPDDDQPWMLIHTMAIFAFLGNANLIGTRLKG
Ga0316622_1033188711	3300033416	Soil	MSPELHLPVFLAALVAMQGLLTLWSYRTSGSTSTALLVGLLPPVGIPYQLWLLRTRLLDNHIAGALTYLALIAACLGFYILMPPDETPWMLIHTMAAFAFLG
Ga0316625_1027588192	3300033418	Soil	VSPELHLPVFLAAVVALQGLLTLWSYRASGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0316601_1015015471	3300033419	Soil	MSPELHLPVFLAALVAMQGLLTLWSYRASGSTSTALLVGLLPPVGIPYQLWLLRAQLFDNHIAGALTYLALIAACLGFYFLMPPDETPWMLIHTMAGFAFLGTANV
Ga0316627_1002294811	3300033482	Soil	MSPELHLPISLAALVAMQGLLTLWSLRASGSMPTALLVGLLPLVGLPYQLWQLRARLVDNHIAGAITYLALVAACLGFYFYYRIWMPDDDKPWMLIHTMAIFAFLGNANLIGTRLKD
Ga0316627_1005929802	3300033482	Soil	VSPELHLPLFLGAFVLLQGLLTLWSYRASGSAPTALLVALLPPVGLPYQLWQLRTRLVDNHIAGATTYLALLTACFGFYLLMPADETPWMLIHTMAIFAFLGTANVIGTRLKE
Ga0316627_1012503402	3300033482	Soil	LNPELHLPIFLAAFVALQGLLTLWSYRTSGSAPIALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALISACFGFYFLMPADETPWMLIHTMAIFSFLGTANVIGTNLKD
Ga0316627_1016321852	3300033482	Soil	NCPGQRRPADDGAPGVSPELNLPVFLAAVVAMQGLLTLWSLRTSGSTPTALLVGLLPLVGLPYQLWQLRARLVDNHIAGAITYLALVAACFGFYFLEPTDETPWMLIHTMAGFAFLGNANVIGTRLKD
Ga0316627_1021163601	3300033482	Soil	MRAPRIRASARICAPPGFLDRAAERPLYSRPVSPELNLPVFLAAIVAMQGLLTLWSVRASGSTPTALLVGLLPLVGIPYQLWQLRARLVDNHIAGAITYLALVASCFGFYFFYLFTAADETPWMLIHTMAGFAFLGNANL
Ga0316627_1021937351	3300033482	Soil	VRTWAPPAFLDRGAGRSLYSRPVSPELNLPVFLAAFVAMQGLLTLWSVRASGSTSTALLVGLLPPVGIPYQLWQLRARLVDNHVAGAITYLALVAACFGFYFYYLFTAADETPWMLIHTMAGFAFLGNANLIGTRLKD
Ga0316627_1027299291	3300033482	Soil	LPLFLAAFAALQGLFTLWSYRTSGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0316627_1029607201	3300033482	Soil	VSPELHLPIFLAAVVAMQGLLTLWSLRASGSMPTALLVGLLPLVGLPYQLWQLRTRLVDNHIAGAVTYLALVAACFGFYSFYFFTAADETPWMLIHTMALFAFLGNANLIGTRLKD
Ga0316629_106584011	3300033483	Soil	VSPELHLPVFLTAVVALQGLLTLWSYRASGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0316629_114044712	3300033483	Soil	VSPELHLPVFLAAFVSLQGLLTFWSYRTSGSVSTALLVALLPLVGLPYQLWQLRARLFDNHIAGTITYLALLASCFGFYFLMPADETPWMLIHTMSIFAFLGTANVIGTALKE
Ga0316626_114091741	3300033485	Soil	MSPELHLPVFLAALVAMQGLLTLWSYRASGSTSTALLVGLLPLVGIPYQLWLLRARLFDNHIAGALTYLALIAACLGFYFLMPPDETPWILIHTMAAFAFLGTANLVGTSLKK
Ga0316621_105841662	3300033488	Soil	APPGFLDRAAERPLYSRPVSPELNLPVFLAAIVAMQGLLTLWSVRASGSTPTALLVGLLPLVGIPYQLWQLRARLVDNHIAGAITYLALVASCFGFYFFYLFTAADETPWMLIHTMAGFAFLGNANLIGTRLKD
Ga0316621_107615192	3300033488	Soil	VSPELHLPIFLAALVAMQGLLTLWSLRANGSMPTALLVGLLPLVGLPYQLWQLRSRLVDNHIAGAITYLALVAACLGFYFYYRIWMPDDDQPWMLIHTMAIFAFLGNANLIGTRLKD
Ga0316621_109807611	3300033488	Soil	MSPEANLPLLLCALVALQGALTFWSYRRSGSMPTALLVALLPLVGLPYQLWQMRARLYDNHVAGAITYLGLFVAAPAFYFTMPADETPWMLLNTMALFALIGVANVVGTAVKE
Ga0316621_112494531	3300033488	Soil	PVFLASVVALQGLLTLWSYRTSGSAPTALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0316621_115879601	3300033488	Soil	LPTMSPELHLPISLAALVAMQGLLTLWSLRASGSMPTALLVGLLPLVGLPYQLWQLRARLVDNHIAGAITYLALVAACLGFYFYYRIWMPDDDKPWMLIHTMAIFAFLGNANLIGTRLKD
Ga0316616_1005535842	3300033521	Soil	VSPELHLPLFLGAFVLLQGLLTLWSYRASGSAPTALLVALLPPVGLPYQLWQLRTRLFDNHIAGATTYLALLTACLGFYLLMPADETPWMLIHTMAIFAFLGTANVIGTRLKE
Ga0316616_1008255561	3300033521	Soil	VSPELHLPVFLAAFVSLQGMLTFWSYRTSGSVSTALLVALLPLVGLPYQLWQLRARLFDNHIAGTITYLALLASCFGFYFLMPADETPWMLIHTMSIFAFLGTANVIGTSLKD
Ga0316616_1008796192	3300033521	Soil	MSPGLHLPVFLAAFGAMQVLLTLWSYRASGSTPTALLVALLPPVGLPYQLWTLRERLLDNHVAGAVTYLALVGACFGFYALMPSDETPWMLIHTMAIFAFLGTANVIGTSLKD
Ga0316616_1010445922	3300033521	Soil	VSPELHLPLFLAAFVALQGLLTLWSYRASGSAPTALLVALLPLVGLPYQLWQLRSRLLDNHIAGTITYLSLITACFGFYFLMPADETPWMLIHTMAIFAFLGTANVIGTGLKD
Ga0316616_1012727822	3300033521	Soil	MRAPRIRASARICAPPGFLDRAAERPLYSRPVSPELNLPVFLAAIVAMQGLLTLWSVRASGSTPTALLVGLLPLVGIPYQLWQLRARLVDNHIAGAITYLALVAACFGFYFFYLFTAADETPWMLIHTMAGFAFLGNANLIGTRLKD
Ga0316616_1012943272	3300033521	Soil	MSPELHLPISLAALVAMQGLLTLWSLRASGSMPTALLVGLLPLVGLPYQLWQLRARLVDNHIAGAITYLALVAACLGFYFYYRIWMPDDDQPWKLIHTMVIFGFLGQANLVGTRLKD
Ga0316616_1016948822	3300033521	Soil	VSPELHLPVFLAAIVAMQGLLTLWSLRASGSTPTALLVGLLPPIGVPYQLWQLRARLVDNHVAGAVTYLALVAACFGFYFLMPADETPWMLIHTMAIFAFLGNANLIGTRLKDF
Ga0316616_1018208222	3300033521	Soil	MSPEANLPLLLGAVAVFQAALAFWAWRSSGSTSSALLVALLPVVGLPYQLWQLRARLFDNHVAGAITYLGLLVAGPAFYVTLPADETPWMLLNTMALFALIGVANVVGTSLKD
Ga0316616_1020834131	3300033521	Soil	VSPDLYLPVALAAFVAMQGLLTLWSYRASGSTPTALLVGLLPVVGLPYQLWQLRARIVDNHVAGALTYLALVAAGFGFYLLMPSDETPWMLILTMAGFAFLGMANVLGTRLKD
Ga0316616_1024541551	3300033521	Soil	PVFLAAIVAMQGLLALWSYRVSGSTPTALLVALLPVVGLPYQLWQLRARIVDNHVAGALTYLALVVACFGFYLLKPADETPWMLIHTMAIFAFLGMANLLGTQLRD
Ga0316617_1004807262	3300033557	Soil	VSPELHLPVFLAAIVAMQGLLTLWSLRASGSMPNALLVGLLPLVGLPYQLWQLRARLVDNHIAGAVTYLALIAACFGFYFLMPADETPWMLIHTMAIFAFLG
Ga0316617_1006370441	3300033557	Soil	VSPELHLPLFLGAFVLLQGLLTLWSYRASGSAPTALLVALLPPVGLPYQLWQLRTRLFDNHIAGATTYLALLTACFGFYLLMPADETPWMLIHTMAIFAF
Ga0316617_1007110771	3300033557	Soil	VQAGFPSVDRIVAAAGGPVNAPPAFLDRAAERPLYSRPVSPELNLPVFLAAIVAMQGLLTLWSVRASGSTSTALLVGLLPPVGIPYQLWQLRARLVDNHVAGAITYLALVAACFGFYFYYLVTAADETPWMLIHTMAGFAFLGNANLIGTRLKD
Ga0316617_1011359612	3300033557	Soil	APGRLPGGGAPRLNPELHLPIFLAAFVALQGLLTLWSYRTSGSAPIALLVALLPLVGLPYQLWQLRSRLFDNHIAGTITYLALISACFGFYFLMPADETPWMLIHTMAIFSFLGTANVIGTNLKD
Ga0316617_1014878881	3300033557	Soil	MSPEVNLPLLLCALAALQGALTFWSYRRSGSMPTALLVALLPVVGLPYQLWQMRARLYDNHVAGAITYLGLFVAAPAFYFTMPADETPWMLMNTMALFALIGVAN
Ga0316617_1026982721	3300033557	Soil	MSPELHLPISLAALVAMQGLLTLWSLRASGSMPTALLVGLLPLVGLPYQLWQLRARIVDNHIAGAITYLALVAACFGFYFWMPSDETPWMVIHTMAIFAFLGNANIIGTRLKD
Ga0364925_0069996_435_776	3300034147	Sediment	VSPELHLPVFLAAIVSMQGLLTLWSYRASGSTSTALLVALLPLVGLPYQLWQLRLRLVDNHVAGAVTYLALVLSCFGFYFKMPADETPWTLIHTMAIFAFLGTANLIGTQLKD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087395

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences