NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F087170

Metagenome / Metatranscriptome Family F087170

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087170
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 52 residues
Representative Sequence VSFYRPTGRLDPAPADLAYGSLELAALEYQARRGEIILLYEDETILWRFA
Number of Associated Samples 96
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 31.19 %
% of genes near scaffold ends (potentially truncated) 92.73 %
% of genes from short scaffolds (< 2000 bps) 94.55 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.182 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(13.636 % of family members)
Environment Ontology (ENVO) Unclassified
(20.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.545 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.36%    β-sheet: 0.00%    Coil/Unstructured: 75.64%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF13565HTH_32 54.55
PF13551HTH_29 12.73
PF13751DDE_Tnp_1_6 1.82
PF13358DDE_3 1.82
PF14659Phage_int_SAM_3 0.91
PF10551MULE 0.91
PF13613HTH_Tnp_4 0.91
PF14690zf-ISL3 0.91
PF14104DUF4277 0.91
PF12760Zn_Tnp_IS1595 0.91
PF07592DDE_Tnp_ISAZ013 0.91



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.18 %
UnclassifiedrootN/A1.82 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_102589358All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6680Open in IMG/M
3300001034|JGI12356J13136_10092All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6563Open in IMG/M
3300003911|JGI25405J52794_10116886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6600Open in IMG/M
3300004267|Ga0066396_10045693All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6688Open in IMG/M
3300004480|Ga0062592_101208373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6707Open in IMG/M
3300004633|Ga0066395_10877625All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6542Open in IMG/M
3300005294|Ga0065705_10146961Not Available2008Open in IMG/M
3300005332|Ga0066388_104121320All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6741Open in IMG/M
3300005332|Ga0066388_104456259All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria713Open in IMG/M
3300005445|Ga0070708_101770737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6574Open in IMG/M
3300005447|Ga0066689_10221307All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61156Open in IMG/M
3300005467|Ga0070706_101240550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6684Open in IMG/M
3300005468|Ga0070707_101695607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6599Open in IMG/M
3300005540|Ga0066697_10389552All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6810Open in IMG/M
3300005552|Ga0066701_10254329All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300005555|Ga0066692_10261657All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300005558|Ga0066698_10680115All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6682Open in IMG/M
3300005561|Ga0066699_10140748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61636Open in IMG/M
3300005568|Ga0066703_10036848All Organisms → cellular organisms → Bacteria2673Open in IMG/M
3300005576|Ga0066708_10329866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6979Open in IMG/M
3300005713|Ga0066905_101083278All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6711Open in IMG/M
3300006572|Ga0074051_11227067All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6556Open in IMG/M
3300006806|Ga0079220_10420794All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300006845|Ga0075421_101463733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6749Open in IMG/M
3300006845|Ga0075421_102811927All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6501Open in IMG/M
3300006846|Ga0075430_100817990All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6768Open in IMG/M
3300006865|Ga0073934_10312044All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61001Open in IMG/M
3300006871|Ga0075434_100171367All Organisms → cellular organisms → Bacteria2190Open in IMG/M
3300006880|Ga0075429_101092983All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6696Open in IMG/M
3300006918|Ga0079216_10968879All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6652Open in IMG/M
3300006969|Ga0075419_10398560All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6942Open in IMG/M
3300009090|Ga0099827_10517319All Organisms → cellular organisms → Bacteria1026Open in IMG/M
3300009094|Ga0111539_10097317All Organisms → cellular organisms → Bacteria3457Open in IMG/M
3300009094|Ga0111539_11239676All Organisms → cellular organisms → Bacteria866Open in IMG/M
3300009100|Ga0075418_11845633All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6658Open in IMG/M
3300009147|Ga0114129_10426907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61742Open in IMG/M
3300009147|Ga0114129_10666744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61341Open in IMG/M
3300009156|Ga0111538_11278610All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6926Open in IMG/M
3300009792|Ga0126374_10893440All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6688Open in IMG/M
3300009810|Ga0105088_1025871All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6933Open in IMG/M
3300009837|Ga0105058_1159810All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6551Open in IMG/M
3300010046|Ga0126384_11651347All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6605Open in IMG/M
3300010046|Ga0126384_11867575All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6572Open in IMG/M
3300010047|Ga0126382_10198934All Organisms → cellular organisms → Bacteria1423Open in IMG/M
3300010047|Ga0126382_10826768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6793Open in IMG/M
3300010047|Ga0126382_11183317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6683Open in IMG/M
3300010047|Ga0126382_12105214All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6540Open in IMG/M
3300010140|Ga0127456_1062278All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6788Open in IMG/M
3300010323|Ga0134086_10143641All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6867Open in IMG/M
3300010326|Ga0134065_10221435All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6694Open in IMG/M
3300010329|Ga0134111_10372706All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6607Open in IMG/M
3300010359|Ga0126376_10502953All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1122Open in IMG/M
3300010359|Ga0126376_12210839All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6595Open in IMG/M
3300010360|Ga0126372_11143664All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6799Open in IMG/M
3300010362|Ga0126377_11059116All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300010362|Ga0126377_11126658All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300010366|Ga0126379_11683664All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6739Open in IMG/M
3300010366|Ga0126379_12938755All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6570Open in IMG/M
3300010373|Ga0134128_12674449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6550Open in IMG/M
3300012198|Ga0137364_10560472All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6860Open in IMG/M
3300012199|Ga0137383_10792571All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6692Open in IMG/M
3300012206|Ga0137380_10340831All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61338Open in IMG/M
3300012206|Ga0137380_11314269All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6608Open in IMG/M
3300012209|Ga0137379_11508857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6573Open in IMG/M
3300012210|Ga0137378_10475271All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61156Open in IMG/M
3300012212|Ga0150985_103843193All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6670Open in IMG/M
3300012349|Ga0137387_10859045All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6657Open in IMG/M
3300012357|Ga0137384_10852538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6735Open in IMG/M
3300012362|Ga0137361_10594257All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61014Open in IMG/M
3300012918|Ga0137396_10761099All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6713Open in IMG/M
3300012930|Ga0137407_10402866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61267Open in IMG/M
3300012948|Ga0126375_11070276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6662Open in IMG/M
3300012975|Ga0134110_10405074All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300014157|Ga0134078_10325305All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6669Open in IMG/M
3300014488|Ga0182001_10167746All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6769Open in IMG/M
3300018431|Ga0066655_10176818All Organisms → cellular organisms → Bacteria1296Open in IMG/M
3300018431|Ga0066655_10441834All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6859Open in IMG/M
3300019259|Ga0184646_1372801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6785Open in IMG/M
3300021080|Ga0210382_10334497All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6668Open in IMG/M
3300022195|Ga0222625_1297752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6756Open in IMG/M
3300024288|Ga0179589_10285222All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6740Open in IMG/M
3300026142|Ga0207698_11828020All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6623Open in IMG/M
3300026310|Ga0209239_1298627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6557Open in IMG/M
3300026550|Ga0209474_10441847All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6663Open in IMG/M
3300026704|Ga0208581_103954All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6663Open in IMG/M
3300027907|Ga0207428_11147627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6542Open in IMG/M
3300027909|Ga0209382_11170327All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6789Open in IMG/M
3300027909|Ga0209382_11348901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6720Open in IMG/M
3300028803|Ga0307281_10248207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6653Open in IMG/M
3300028809|Ga0247824_10893387All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6555Open in IMG/M
3300028889|Ga0247827_11105562All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae544Open in IMG/M
3300030502|Ga0268258_10115478All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6615Open in IMG/M
3300031058|Ga0308189_10263921All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6656Open in IMG/M
3300031114|Ga0308187_10460824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6515Open in IMG/M
3300031125|Ga0308182_1003488All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61027Open in IMG/M
3300031226|Ga0307497_10393812All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6660Open in IMG/M
3300031847|Ga0310907_10381066All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6730Open in IMG/M
3300031854|Ga0310904_10575533All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6765Open in IMG/M
3300031940|Ga0310901_10017573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_62024Open in IMG/M
3300031943|Ga0310885_10760689All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6548Open in IMG/M
3300032180|Ga0307471_102943738All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6604Open in IMG/M
3300032205|Ga0307472_101909627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6592Open in IMG/M
3300034480|Ga0314789_014140All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6681Open in IMG/M
3300034659|Ga0314780_021804All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61099Open in IMG/M
3300034663|Ga0314784_120048All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6568Open in IMG/M
3300034667|Ga0314792_143734All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6632Open in IMG/M
3300034670|Ga0314795_073425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6646Open in IMG/M
3300034671|Ga0314796_054314All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6773Open in IMG/M
3300034672|Ga0314797_050751All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6753Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil13.64%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere13.64%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil11.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.45%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil5.45%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.55%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.73%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.73%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.82%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.82%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.82%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.82%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.82%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment0.91%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.91%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.91%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.91%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.91%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.91%
AgaveHost-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001034Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized -NN607EnvironmentalOpen in IMG/M
3300003911Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300004267Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBioEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300006572Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006865Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaGEnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009810Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30EnvironmentalOpen in IMG/M
3300009837Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010140Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014488Bulk soil microbial communities from Mexico - San Felipe (SF) metaGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300019259Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026704Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized - NN606 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300030502Agave microbial communities from Guanajuato, Mexico - As.Sf.rz (v2)Host-AssociatedOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031125Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300034480Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034659Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034663Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034667Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034670Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034671Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034672Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10258935823300000955SoilLKKNALSYCRPTGQLTPTSAALSYASIDLAVLEYRARRGEIILLYADETVL*
JGI12356J13136_1009213300001034SoilLTYCRPTGRLDPNPADLAYGSIDLAALEYRARRGEIILLYEDETILWRFALPRA
JGI25405J52794_1011688613300003911Tabebuia Heterophylla RhizosphereVLSFYRPTGRLAPAPAALAYASVELAALEYQARRGEIILLYADETIL
Ga0066396_1004569323300004267Tropical Forest SoilLSYCRPTGRLDPEPADLAYGSVALAALEYQARQGDIILLYADET
Ga0062592_10120837323300004480SoilLSYSRPTGRLEPDPTELALARLDLSLLHERTRLGEIILLYEDETVLWRFALPRRGWWRRGRRY
Ga0066395_1087762523300004633Tropical Forest SoilLTYCRPTGRLDPNPADLAYGSIDLAALEYRARRGEIILLYEDETILW
Ga0065705_1014696113300005294Switchgrass RhizosphereVLNVGARCLKKKKVSSYRPTGRLDPTPADLAYGSLELAALEYQARRGEIILLYED
Ga0066388_10412132013300005332Tropical Forest SoilVSFYRPTGQLAPDPAALAYASVDLAALEYQAHRGEIILLYADETILWPGLPPIP*
Ga0066388_10445625923300005332Tropical Forest SoilLSAESYYRPTGRLDPAPADLAYGSLELAALEYRARRGEIILLYE
Ga0070708_10177073713300005445Corn, Switchgrass And Miscanthus RhizosphereVSFYRPTGRLDPAPADLAYGSLELAALEYQARRGEIILLYEDETILWRF
Ga0066689_1022130713300005447SoilVKNNTVSSCRPPGRLDPTPADLAYGSLDLAALEYRARRGEIIVLYEDATILWRFALPRLGWWRRAQ
Ga0070706_10124055023300005467Corn, Switchgrass And Miscanthus RhizosphereVSFYRFTGRLDPVPADLASGSRELAALEYQARRGEIILLYEDDTILWRFAL
Ga0070707_10169560713300005468Corn, Switchgrass And Miscanthus RhizosphereVKKNDVSSSRPTGRLAPAPAALAWASLALAALEYRARRGEMIVLYDDETIVWRFALPR
Ga0066697_1038955213300005540SoilLDPAPADLAYGSLELAALEYQARRGEIILLYEDETILW
Ga0066701_1025432933300005552SoilVKKNTVSSCRPPGRLDPTPADLASGSLDLAALEYRARRGEIIVLDEDATILWRFALPRWGWWRRA
Ga0066692_1026165733300005555SoilVSFYRPTGRLDPAPADLAYGSLELAALEYQARRGEIILLYEDETILWRFA
Ga0066698_1068011513300005558SoilVSFYRPTGLLAPDPAALAYASVELAALEYQARRGEILLLYADETILWRFA
Ga0066699_1014074853300005561SoilVKKNTLSYCRPTGRLDPTPADLAYGSLDLAALEYRARRGEIIVLYEDATILWRFALPR
Ga0066703_1003684823300005568SoilVKKSLSYYRPTGQLTPAPAALAYGSVALAALEYQARRGEIILLYEDETILALPRFW*
Ga0066708_1032986613300005576SoilVKKNTRSSCRPTGRLDPNPADLAYGSLELAALEYQARRGEIILLYEDETILWRFALPRAGWWRKV*
Ga0066905_10108327823300005713Tropical Forest SoilVSFYRPTGLLTPAPAALAYASVELAALEYQARRGE
Ga0074051_1122706713300006572SoilVKKKDGSSSRPTGRLTPKPAELAWASLELAALESQARRGEIILLDEDETILWRFALPRAGWWRKA
Ga0079220_1042079433300006806Agricultural SoilLSFYRPTGRLDPAPADLAYGSLELAALEYQARRGEIILLYEDETVLWRFA
Ga0075421_10146373313300006845Populus RhizosphereVSFYRPTGRLDPAPADLAYGALALAAREYQARRGEIILLYEDE
Ga0075421_10281192723300006845Populus RhizosphereLSYCRPTGRLDPNPADLAYGRLELEALEYWARQDEIILLYQDETVLWRFALPRRGWWRRSQRYRLPTRPL
Ga0075430_10081799013300006846Populus RhizosphereLTYCRPTGRLDPNPADLAYGSIDLAALEYRARRGEIILLYEDETILWRFALPRAGWWRKAQR
Ga0073934_1031204413300006865Hot Spring SedimentLSYCRPTGRLEPNPADLAYASLALAALEYRARQGAIILLYEDETILWRFALPRRGW
Ga0075434_10017136713300006871Populus RhizosphereLDPNPAALASGSLALAALESQARRGEIIVLSEDDTILWRFALPRA
Ga0075429_10109298313300006880Populus RhizosphereLSYCRPTGWLDPTPANLASGSIDLAALEYRARRGEIILFYEDETILWRFALPRLGWWRR
Ga0079216_1096887913300006918Agricultural SoilLTYCHPTGRLDPNPADLAYGSIALAALEYRARRGEIIVLYEDETTLWR
Ga0075419_1039856033300006969Populus RhizosphereLSYVRPTGRLHPNPADLAYGRLELAALEHWSKQEQIILLYEDETVLWRFALPRRGWWRRSHR
Ga0099827_1051731913300009090Vadose Zone SoilVKKKDVSSSRPTGRLAPAPAELAWGSVELAALEYRARRGEIILLYEDETILWRFAL
Ga0111539_1009731713300009094Populus RhizosphereLKKKALTYCRPTGRLDPNPADLASGSIDLAALEYRARRGEIILLYEDDTVLWRFALPRLGWWRRA
Ga0111539_1123967613300009094Populus RhizosphereVSFYRPTGRLDPAPADLAYGSLALAALEYQARRGEIILLYEDETILW
Ga0075418_1184563313300009100Populus RhizosphereLTYCRPTGRLDPNPADLAYGSIDLAALEYRARRGEIILLYEDDTVLWRFALPRLGWWRRA
Ga0114129_1042690713300009147Populus RhizosphereVSFYRPTGRLAPDPAALAYASVELAALEYQARRGEIILLYADETI
Ga0114129_1066674423300009147Populus RhizosphereLDPAPADLAYGSLALAAREYQARRGEIIVLYEDETILWRFALPRAGW*
Ga0111538_1127861023300009156Populus RhizosphereVSFYRPTGRLDPAPADLAYGSLALAALEYQARRGEIILLYEDETILWRFALPRAG
Ga0126374_1089344013300009792Tropical Forest SoilLSFYRPTGRLDPAPADLAYGALELAALEYQARRGEIIL
Ga0105088_102587113300009810Groundwater SandVKKTPRRSCRPTGRRDPTPADLAYGALDLAARADQARRGESIGLYADATILWRCALPRAGWWRTAQ
Ga0105058_115981023300009837Groundwater SandVKKNHVSSDRPTGRLDPAPAELAYGSLDLAALESQARRGEILVLSED
Ga0126384_1165134713300010046Tropical Forest SoilLSYCRPTGRLDPNPADLAQASLELAALEDRARRGEIIFLYEEETVLWRFALPRVGW
Ga0126384_1186757513300010046Tropical Forest SoilVKKNVWSFYRPTGRLDPAPADLAYGALELAALEYQARRGEIILLYTDETILWRFALL
Ga0126382_1019893413300010047Tropical Forest SoilLKKNAVSFYRPTGRLEPAPADLAYGSLELAALEYQARRGEIILLYEDETI
Ga0126382_1082676823300010047Tropical Forest SoilVSFYRPTGRLEPDPAALSYGSLELAALEYRARRGEIILL*
Ga0126382_1118331713300010047Tropical Forest SoilVSYYRPTGRLDPAPADLASGSLELAALEYQARQGKIILLYEDET
Ga0126382_1210521413300010047Tropical Forest SoilVSYYRPTGRLDPHPADLAYGALELAALEYQARRGEIIVLYEDATILWRLALPRA
Ga0127456_106227823300010140Grasslands SoilVLKKNTLSYCRPTGRLDPTPADLAYGSLELAALEYRARRGDIILLYEDET
Ga0134086_1014364113300010323Grasslands SoilVKNNTVSSCRPPGRLDPTPADLAYGSLDLAALEYRARRGEIIVLYEDATILWRFALPRWGKAPEDRCIFVEHND
Ga0134065_1022143523300010326Grasslands SoilVKNNTVSSCRPPGRLDPTPADLAYGSLDLAALEYRARRGEIIVLYEDATILWRFALPRW
Ga0134111_1037270613300010329Grasslands SoilVKKHTVSSCRPPGRLDPTPADLAYGSLDLAALEYRARRGEIIVLYEDAPILWRFALPR
Ga0126376_1050295333300010359Tropical Forest SoilSRPTGRLEPTPAEFASGSLALAALESQARRGEIRGL*
Ga0126376_1221083923300010359Tropical Forest SoilVSFYRPTGRLDPTPADLAYGSLELAALEYRARRGE
Ga0126372_1114366413300010360Tropical Forest SoilLLSYCRPTGRLDPNPADLAYGRLELEALEYWARQGEIILLYQDETVLWRFALPRRGWWRRRQ
Ga0126377_1105911613300010362Tropical Forest SoilLDGSFKKKEVSSYRPTGRLDPNPADLAYGALELAALEYQARRGEIILLYEDETIL
Ga0126377_1112665833300010362Tropical Forest SoilLTYCRPTGRLDPNPADLAYGSIDLAALEYRARRGEIILLYEDETILWRFALPRAGWWRK
Ga0126379_1168366413300010366Tropical Forest SoilVSFYRPTGRLDPAPAALAYGSLELAALEYQARRGEIILLYA
Ga0126379_1293875523300010366Tropical Forest SoilVKCEKKRVSYSRPTGRLAPDPAELAWASLELAALEYRARWGEIILLYEDETVLWRF
Ga0134128_1267444913300010373Terrestrial SoilLDPAPADLAYGSLELAALEYQARRGEIILLYEDETIL
Ga0137364_1056047233300012198Vadose Zone SoilVKKNTLSSCRPTGRLDPTPADLAYGSLELAALEYRARRGEIILLYEDETILWRFAMLRAGWWRRAQRARLPT
Ga0137383_1079257123300012199Vadose Zone SoilVSYYRPTGRLDPDPAAFAYGSLALAALEYRARRGEIILLYED
Ga0137380_1034083143300012206Vadose Zone SoilVSYYRPTGRLDPDPAAFAYGSLALAALEYRARRGEIILLYEDDTILWRFALPRAGWWR
Ga0137380_1131426923300012206Vadose Zone SoilVKNNTVSYCRPPGRLDPTPADLASGSIDLAALEYRARRGEIIVLYEDE
Ga0137379_1150885713300012209Vadose Zone SoilVKKNTISYCRPTGRLDPTPADLAYGSIDLAALEYRARRGEIILLYEDETILWRFA
Ga0137378_1047527143300012210Vadose Zone SoilMKKNEVSYYRPTGRLDPTPAALAYGSLELAALEYQARRGEIILLYEDETILWRFALP
Ga0150985_10384319313300012212Avena Fatua RhizosphereMKKKARSSSRPTGRLAPNPAARAWASVALAALEDRARRGELIGLSADATLLWRFALP
Ga0137387_1085904513300012349Vadose Zone SoilVKKNTLSYCRPTGRLDPNPADLAYGSLELAALEYRARRGEIILLYEDETILWRFAMLRAGWWRR
Ga0137384_1085253813300012357Vadose Zone SoilVKKKDVSYYRPTGRLDPHPADLAYGSLALAALEYRARRDEIIVLYEDETILWRFALPR
Ga0137361_1059425713300012362Vadose Zone SoilLTYCRPTGRLDPNPADLAYGSIDLAALEYRARRGEIILLYEDETILWRFAMLRA
Ga0137396_1076109913300012918Vadose Zone SoilVECEKKQVSSYRPTGRLDPNPADLAYGALELAALESQARRGEIILLSEDETILWRFALPRAG
Ga0137407_1040286613300012930Vadose Zone SoilVKKNTLSSCRPTGRLDPTPADLAYGSLELAALEYRARRGEIILLYEDE
Ga0126375_1107027623300012948Tropical Forest SoilVSFYRPTGRLDPAPAELAYGALELAALEYQARRGEITLLYEDETILWRFA
Ga0134110_1040507413300012975Grasslands SoilRPPGRLAPDPAALAWASLDLAALESRARRGESIGR*
Ga0134078_1032530513300014157Grasslands SoilLSFYRPTGRLAPAPADLAYGSLELAALEYQARRGEIILLYADETILWRFAL
Ga0182001_1016774613300014488SoilLSYLRPTGRLAPHPADLAYGRLELAALEYWASQDRIILLYEDETVLWRFALSRRGW*
Ga0066655_1017681823300018431Grasslands SoilLKKKDVSSYRPTGRLDPAPADLAYGSLELAALEYQARHGEIIVLYADETI
Ga0066655_1044183413300018431Grasslands SoilVKKNTLSSCRPTGRLDPTPADLAYGSLDLAALEYRARRGEIIVLDENATILWRFALPRWG
Ga0184646_137280113300019259Groundwater SedimentVKKNTLSYCRPTGRLNPNPADLAYGSLALAALEYQARRGEIILLYEDETILW
Ga0210382_1033449713300021080Groundwater SedimentVKKKDGSSSRPTGRLAPQPAALAWAALALAALESRARRGEIILLDEDETILWRFALPRAGWW
Ga0222625_129775213300022195Groundwater SedimentMKKNTGSSCRPTGRLDPTPADLASGSVDLAALASRARRGEIIWLYEDETIL
Ga0179589_1028522213300024288Vadose Zone SoilVSFYRPTGRLDPAPADLAYGSLALAALEYQARRGEINVLYEDE
Ga0207698_1182802013300026142Corn RhizosphereVSAACEKKDLSYYRPTGRLEPDLAALAYASIDLAALAYQARRGEIILLYEDETVLW
Ga0209239_129862723300026310Grasslands SoilVKKNTLSSCRPTGRLDPTPADLAYGSLDLAALEYRARRGEIIVLDEDETILWRFALPR
Ga0209474_1044184713300026550SoilLDPAPADLAYGSLELAALEYQARRGEIILLYEDETI
Ga0208581_10395423300026704SoilVSFSRPTGRLEPAPADLAYGSLELAALEYQARRGEIILLYEDETILWRFA
Ga0207428_1114762723300027907Populus RhizosphereLTYCRPTGRLDPNPADLASGSIDLAALEYRARRGEIILLYEDETILWRFALPRAGW
Ga0209382_1117032733300027909Populus RhizosphereLDPNPADLAYGSLELAALEYQARRGEIILLYEDETILWRF
Ga0209382_1134890123300027909Populus RhizosphereVSFYRPTGRLDPAPADLAYGALALAAREYQARRGEI
Ga0307281_1024820733300028803SoilVKKNTLSSCRPTGRLDPTPADLAYGSLDLAALESRARRGESIVLYEDEPILWRFA
Ga0247824_1089338713300028809SoilVSFYRPTGRLAPDPAALAYASVELAALEYQARRGEIILL
Ga0247827_1110556223300028889SoilVSFYRPTGRLEPAPADLAYGSLELAALEYQARRGEIIV
Ga0268258_1011547813300030502AgaveLSYCRPTGRLDPNPADLAYGRLELEALEYGARQDEIILLYQDETVLWRFALPR
Ga0308190_104398033300030993SoilMKKNTCRSCRPTGRLDPTPADLAYGSVDLAALAYRARRGEIILLYEDETILRRFALPRLGWWRRAQRPRL
Ga0308189_1026392123300031058SoilVKKKDGSSSRPTGRLDPAPADLAYASLELAALESRARRGEIILLYEDETILWRFALPRA
Ga0308187_1046082413300031114SoilMKKNTGSYCRPTGRLDPTPADLAYGSVDLAALASRARRGEIILLYEDETI
Ga0308182_100348813300031125SoilMKKNTGSSCRPTGRLDPTPADLASGSVDLAALASRARRGEIIWLYEDETILWRFALPRLGWWRRAQRP
Ga0307497_1039381213300031226SoilVKKNWLSSCRPTGRLDPNPADLAYGRLELEALKYWARQGESILLYQDETVLWRLALPR
Ga0310907_1038106613300031847SoilLSYSRPTGRLEPDPTELALARLDLFLLHERTRLGEIILLYEDETVLWRFALPRRGWWRRGRRYRLPLR
Ga0310904_1057553313300031854SoilLSFYRPTGRLDPAPADLAYGSLELAALEYQARRGEIILLYEDETVLW
Ga0310901_1001757323300031940SoilLKKNALTYCRPTGRLDPNPADLAYGSIDLAALEYRARRGEIILLYEDETILWRF
Ga0310885_1076068923300031943SoilVSFYRPTGRLEPAPADLAYGSLELAALEYQARRGEIILLYEDETI
Ga0307471_10294373823300032180Hardwood Forest SoilVSFYRPTGRLDPAPAALAYGALELAALEYPARRGEIIVLSEDE
Ga0307472_10190962723300032205Hardwood Forest SoilVKKNTLSYCRPTGRLDPTPADLAYGSLELAALEYRARRGDIILLYEDETILWRFA
Ga0314789_014140_3_1163300034480SoilMSFYRPTGRLAPDPAALAYASVELAALEYQARRGEIIL
Ga0314780_021804_2_1663300034659SoilMSFYRPTGRLAPDPAALAYASVELAALEYHARRGEILLLYADETIVWRFALPRAG
Ga0314784_120048_439_5673300034663SoilMSFYRPTGRLDPTPADLAYGSLELAALEYQARRGEIILLYEDE
Ga0314792_143734_3_1613300034667SoilLSFYRPTGRLDPAPADLAYGSLELAALEYQARRGEIILLYEDETVLWRFALPR
Ga0314795_073425_1_1353300034670SoilMSFYRPTGRLAPDPAALAYASVELAALEYQARRGEIILLYADETI
Ga0314796_054314_1_1653300034671SoilMSFYRPTGRLAPDPAALAYASVELAALEYQARRGEIILLYADETIVWRFALPRAG
Ga0314797_050751_3_1343300034672SoilMSFYRPTGRLAPDPAALAYASVELAALEYQARRGEIILLYADET


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