Metagenome / Metatranscriptome Family F086926

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F086926
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	64 residues
Representative Sequence	MKIEQIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGLEGYGYSDLFPRTGETPETARHV
Number of Associated Samples	98
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.45 %
% of genes near scaffold ends (potentially truncated)	95.45 %
% of genes from short scaffolds (< 2000 bps)	82.73 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.909 % of family members)
Environment Ontology (ENVO)	Unclassified (37.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.182 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 29.35% Coil/Unstructured: 70.65%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF02310	B12-binding	8.18
PF00856	SET	3.64
PF04055	Radical_SAM	2.73
PF00528	BPD_transp_1	2.73
PF12681	Glyoxalase_2	2.73
PF07883	Cupin_2	1.82
PF01797	Y1_Tnp	1.82
PF01863	YgjP-like	1.82
PF13531	SBP_bac_11	1.82
PF00903	Glyoxalase	1.82
PF01037	AsnC_trans_reg	1.82
PF05922	Inhibitor_I9	0.91
PF13231	PMT_2	0.91
PF14213	DUF4325	0.91
PF11867	DUF3387	0.91
PF09994	DUF2235	0.91
PF12161	HsdM_N	0.91
PF00082	Peptidase_S8	0.91
PF04434	SWIM	0.91
PF09084	NMT1	0.91
PF10057	MpsC	0.91
PF13379	NMT1_2	0.91
PF00496	SBP_bac_5	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1451	UTP pyrophosphatase, metal-dependent hydrolase family	General function prediction only [R]	1.82
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.82
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91
COG1404	Serine protease, subtilisin family	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.91
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.91
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.64 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	16.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	40.91 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	16.36 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	40.91 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	16.36 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	35.45 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.36 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	34.55 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.36 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.91 %
Deltaproteobacteria bacterium RBG_16_58_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_58_17	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	34.55 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.36 %
Lentzea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea	0.91 %
Deltaproteobacteria bacterium RBG_16_58_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_58_17	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	34.55 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.36 %
Lentzea albidocapillata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea → Lentzea albidocapillata	0.91 %
Deltaproteobacteria bacterium RBG_16_58_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_58_17	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %
Unclassified	root	N/A	0.91 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0761549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1601	Open in IMG/M
3300000787\|JGI11643J11755_11452663	All Organisms → cellular organisms → Bacteria → Proteobacteria	749	Open in IMG/M
3300000787\|JGI11643J11755_11622312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1367	Open in IMG/M
3300000789\|JGI1027J11758_13041984	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300002123\|C687J26634_10147870	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300004024\|Ga0055436_10044164	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300004463\|Ga0063356_100697836	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300004778\|Ga0062383_10494588	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300005295\|Ga0065707_10049174	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300005332\|Ga0066388_101552882	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300005332\|Ga0066388_102646995	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300005335\|Ga0070666_10039606	All Organisms → cellular organisms → Bacteria	3142	Open in IMG/M
3300005336\|Ga0070680_101808489	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
3300005355\|Ga0070671_100037604	All Organisms → cellular organisms → Bacteria	4014	Open in IMG/M
3300005355\|Ga0070671_100360955	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300005440\|Ga0070705_100076964	All Organisms → cellular organisms → Bacteria	2036	Open in IMG/M
3300005440\|Ga0070705_101651471	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005467\|Ga0070706_101147093	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300005543\|Ga0070672_100078505	All Organisms → cellular organisms → Bacteria	2641	Open in IMG/M
3300005718\|Ga0068866_11315853	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005829\|Ga0074479_10343785	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300005843\|Ga0068860_100832116	All Organisms → cellular organisms → Bacteria → Proteobacteria	937	Open in IMG/M
3300006046\|Ga0066652_101828006	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	548	Open in IMG/M
3300006794\|Ga0066658_10295415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea → Lentzea albidocapillata	867	Open in IMG/M
3300006845\|Ga0075421_100257027	All Organisms → cellular organisms → Bacteria	2139	Open in IMG/M
3300006847\|Ga0075431_100775451	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300006880\|Ga0075429_100556087	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1005	Open in IMG/M
3300009053\|Ga0105095_10837672	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300009094\|Ga0111539_10146191	All Organisms → cellular organisms → Bacteria	2768	Open in IMG/M
3300009094\|Ga0111539_10211363	All Organisms → cellular organisms → Bacteria	2260	Open in IMG/M
3300009100\|Ga0075418_10363982	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300009100\|Ga0075418_12372954	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300009147\|Ga0114129_10167011	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_58_17	3002	Open in IMG/M
3300009147\|Ga0114129_10649856	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1361	Open in IMG/M
3300009147\|Ga0114129_10782134	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300009147\|Ga0114129_13336068	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	518	Open in IMG/M
3300010036\|Ga0126305_10825296	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	631	Open in IMG/M
3300010040\|Ga0126308_10364116	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	960	Open in IMG/M
3300010047\|Ga0126382_10835448	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300010360\|Ga0126372_10024431	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3649	Open in IMG/M
3300010362\|Ga0126377_13345862	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300010398\|Ga0126383_11769128	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	707	Open in IMG/M
3300010400\|Ga0134122_10101000	All Organisms → cellular organisms → Bacteria	2284	Open in IMG/M
3300010403\|Ga0134123_10304219	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300011395\|Ga0137315_1060050	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	547	Open in IMG/M
3300011419\|Ga0137446_1048645	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300011431\|Ga0137438_1209905	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300012133\|Ga0137329_1041021	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	597	Open in IMG/M
3300012168\|Ga0137357_1133094	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	507	Open in IMG/M
3300012200\|Ga0137382_10279444	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1161	Open in IMG/M
3300012477\|Ga0157336_1019619	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	601	Open in IMG/M
3300012509\|Ga0157334_1002441	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1287	Open in IMG/M
3300012511\|Ga0157332_1033348	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	668	Open in IMG/M
3300012519\|Ga0157352_1000750	All Organisms → cellular organisms → Bacteria	2170	Open in IMG/M
3300012582\|Ga0137358_10096295	All Organisms → cellular organisms → Bacteria	2002	Open in IMG/M
3300012685\|Ga0137397_10030649	All Organisms → cellular organisms → Bacteria	3828	Open in IMG/M
3300012927\|Ga0137416_11659388	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	583	Open in IMG/M
3300012930\|Ga0137407_10561938	Not Available	1069	Open in IMG/M
3300012948\|Ga0126375_11802049	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300012971\|Ga0126369_11138287	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300014265\|Ga0075314_1001040	All Organisms → cellular organisms → Bacteria	5058	Open in IMG/M
3300014297\|Ga0075306_1077213	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	607	Open in IMG/M
3300014326\|Ga0157380_11731884	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	683	Open in IMG/M
3300014877\|Ga0180074_1046404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	915	Open in IMG/M
3300014879\|Ga0180062_1027753	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1176	Open in IMG/M
3300014883\|Ga0180086_1026023	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300015241\|Ga0137418_10709643	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	769	Open in IMG/M
3300015372\|Ga0132256_100492546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1336	Open in IMG/M
3300015372\|Ga0132256_102793968	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300015374\|Ga0132255_102151634	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	850	Open in IMG/M
3300016422\|Ga0182039_11699002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	577	Open in IMG/M
3300017994\|Ga0187822_10047501	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1198	Open in IMG/M
3300017997\|Ga0184610_1262582	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300018052\|Ga0184638_1284939	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	561	Open in IMG/M
3300018072\|Ga0184635_10145285	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300018081\|Ga0184625_10548597	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300018081\|Ga0184625_10572398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300018081\|Ga0184625_10581289	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300018084\|Ga0184629_10194602	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300018482\|Ga0066669_12351756	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300019377\|Ga0190264_11392437	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	600	Open in IMG/M
3300021081\|Ga0210379_10461564	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	563	Open in IMG/M
3300021332\|Ga0210339_1026941	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539	Open in IMG/M
3300021411\|Ga0193709_1099430	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	626	Open in IMG/M
3300022563\|Ga0212128_10747515	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	584	Open in IMG/M
3300025164\|Ga0209521_10030824	All Organisms → cellular organisms → Bacteria	3737	Open in IMG/M
3300025174\|Ga0209324_10088699	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2122	Open in IMG/M
3300025318\|Ga0209519_10586507	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300025926\|Ga0207659_10108977	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M
3300026078\|Ga0207702_10870064	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	892	Open in IMG/M
3300026095\|Ga0207676_12470682	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300026313\|Ga0209761_1259504	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300026372\|Ga0256804_1027059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300026464\|Ga0256814_1031318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300026535\|Ga0256867_10277706	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	597	Open in IMG/M
3300027722\|Ga0209819_10123845	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300027909\|Ga0209382_11350067	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	719	Open in IMG/M
3300030620\|Ga0302046_10112714	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2221	Open in IMG/M
3300031229\|Ga0299913_11144119	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	740	Open in IMG/M
3300031562\|Ga0310886_10620910	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	666	Open in IMG/M
3300031740\|Ga0307468_102517540	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504	Open in IMG/M
3300031901\|Ga0307406_10626563	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	890	Open in IMG/M
3300031944\|Ga0310884_10384499	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	803	Open in IMG/M
3300031965\|Ga0326597_10003331	All Organisms → cellular organisms → Bacteria	23267	Open in IMG/M
3300032002\|Ga0307416_101077881	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	908	Open in IMG/M
3300032017\|Ga0310899_10132693	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1045	Open in IMG/M
3300032163\|Ga0315281_10246539	All Organisms → cellular organisms → Bacteria	1971	Open in IMG/M
3300033813\|Ga0364928_0078722	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300033814\|Ga0364930_0040290	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1585	Open in IMG/M
3300034155\|Ga0370498_096373	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	686	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.64%
Host-Associated	Host-Associated	26.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.09%
Plants	Host-Associated → Plants	26.36%
Aquatic	Environmental → Aquatic	24.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.00%
Sediment	Environmental → Aquatic → Sediment	14.55%
Freshwater	Environmental → Aquatic → Freshwater	7.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.36%
Marine	Environmental → Aquatic → Marine	1.82%
Floodplain	Environmental → Terrestrial → Floodplain	1.82%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	14.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.64%
Loam	Environmental → Terrestrial → Soil → Loam	6.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.82%
Lake	Environmental → Aquatic → Freshwater → Lake	0.91%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.91%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.91%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	14.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.64%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.73%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.82%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.91%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.91%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.91%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.91%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.91%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.91%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.27%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	1.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.82%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.82%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.82%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.82%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.91%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.91%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.91%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.91%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.91%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.91%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.91%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.91%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.91%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002123	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_3	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011395	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT200_2	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300012133	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT121_2	Environmental	Open in IMG/M
3300012168	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT860_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012477	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610	Host-Associated	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300014297	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLC_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014877	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10D	Environmental	Open in IMG/M
3300014879	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10D	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021332	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.384 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026372	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 F5	Environmental	Open in IMG/M
3300026464	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS5	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034155	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_07615493	2228664021	Soil	MKIETIETTILEMPYTKPLITATNHFTVARGLLVKVVTDGGLPGYGYSDLFPRTGETAETARHVIDAVLEPKVNGR
JGI11643J11755_114526631	3300000787	Soil	MKIARIETRALEMPYTKPLVTATNNFTIARGLLVTVETDGGAQGYGYSDLFPRAGETP
JGI11643J11755_116223121	3300000787	Soil	MKIETIETTILEMPYTKPLITATNHFTVARGLLVKVVTDGGLPGYGYSDLFPRTGETAETARHVIDAVLEPKV
JGI1027J11758_130419841	3300000789	Soil	MKIEQIKTXVLEMPYKKPLVTATNNFTVARGLLVKVMTDHGVEGYGYSDLFPRTGETP
C687J26634_101478701	3300002123	Soil	MKIAQIETRPLEMPYTRPLVAATNNFTVARGLLVKAVMDAGVEGYGYSDLSRQLI*
Ga0055436_100441641	3300004024	Natural And Restored Wetlands	MKIAQIETRMFEMPCTKPLVTATNNFTVGRGLLVKAVTDDGVEGYGYSDLFSRTGETSETTR
Ga0063356_1006978362	3300004463	Arabidopsis Thaliana Rhizosphere	MKIEKIETRVLEMPYTKPLVTATNNFTVARGLLVTVGTDRGTEGYGYSDLFPRTGETPETAQHVIQSVLKS
Ga0062383_104945882	3300004778	Wetland Sediment	MKVESIDTKMLEMPYTKPLVTATNNFTVARGLLVTVVTNGGVEGYGYADLFPRSGET
Ga0065707_100491742	3300005295	Switchgrass Rhizosphere	MTIGKVTGVETSLLEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFPRTGETPQTAQHVIDTVLKP
Ga0066388_1015528822	3300005332	Tropical Forest Soil	VKIEYVETTVLEMPYNKPLVTATNNFTVARGLLVKVVTDAGVEGYGYSDLFPRTGETPETARHT
Ga0066388_1026469951	3300005332	Tropical Forest Soil	MKIEQIETTVLEMPYKKPLVTATNNFTVARGLLVKVVTDAGVEGYGYSDLFPRTGETP
Ga0070666_100396065	3300005335	Switchgrass Rhizosphere	MKIGKVTNIETTSLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPR
Ga0070680_1018084892	3300005336	Corn Rhizosphere	MIFIEPKEPEMKIARIETRALEMPYTKPLVTATNNFTIARGLLVTVETDGGAQGYGYSDLFPRAGETPETAQ
Ga0070671_1000376041	3300005355	Switchgrass Rhizosphere	MKIGKVTNIETTSLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRT
Ga0070671_1003609551	3300005355	Switchgrass Rhizosphere	MKIGKVTNIETTVLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRT
Ga0070705_1000769644	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKIGKVTNIETTSLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRTGETPQTAQHV
Ga0070705_1016514711	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKVIQVETTVLEMPYTKPLVTATNNFTVARGVLAKVVTNTGVEGYGYADLFPRT
Ga0070706_1011470932	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VKIDQIETTKLEMPYTKPLVTATNNFTVARGLLVKVVSNGGTEGYGYADLFPRTGETPETAQHVIESVLKSQVIGK
Ga0070672_1000785054	3300005543	Miscanthus Rhizosphere	MKIGKVTNIETTSLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRTGETPQTAQ
Ga0068866_113158532	3300005718	Miscanthus Rhizosphere	MKIGKVTNIETTSLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRTGET
Ga0074479_103437851	3300005829	Sediment (Intertidal)	MKIETIATKKLEMPYTKPLVTATNNFTVARGLLVTVVTNGGVEGYGYADLIIQP
Ga0068860_1008321162	3300005843	Switchgrass Rhizosphere	MKISKVTGVETSLLEMPYTKPLVTATNNFTVARGLLVKVITDGGIEGYGYSDLFPRTGETPQTAQH
Ga0066652_1018280061	3300006046	Soil	MKIGKVAEVETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGIEGYGYSDLFPRTGETP*
Ga0066658_102954151	3300006794	Soil	VKINEIETTVLEMPYTKPLITATNNFTVARGVLVKAVTNGGEGYGYADLFPRTGETPETARHAIDILKPKVVGREL
Ga0075421_1002570271	3300006845	Populus Rhizosphere	MRIEQIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGLEGYGYSDLFP
Ga0075431_1007754511	3300006847	Populus Rhizosphere	MRIERVETKKLEMPYTKPLVTATNNFTVARGLLVTVGTSGGVEGYGYSDLFPRAGETPETAQHVIES
Ga0075429_1005560871	3300006880	Populus Rhizosphere	MKIETVETTVLEMPYTKPLITATNHFTVARGLLVKVVTDRGAQGYGYSDLFPRTGETPETARHVIDAVLKPKITGRELED
Ga0105095_108376722	3300009053	Freshwater Sediment	MKIAQIETQALEMPYTKPLVTATNNFTVARGLLVKVITDGGMEGYGYSDLFPRTGETPQTAQHV
Ga0111539_101461911	3300009094	Populus Rhizosphere	MKIGKVTNIETTVLEMPYTKPLVTATNNFTVAHGILVKVSSGGGIEGYGYSDRCPRTGETPQTAQHVIDSVL
Ga0111539_102113631	3300009094	Populus Rhizosphere	MSKVTGVETSPIEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFPRTGETPQ
Ga0075418_103639821	3300009100	Populus Rhizosphere	MRIEQIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGLEGYGYSDLFPRTGET
Ga0075418_123729541	3300009100	Populus Rhizosphere	VKIEQIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGLEGYGYSDLFPRTGET
Ga0114129_101670111	3300009147	Populus Rhizosphere	MKIDTIETTVLEMPYEKPLVTATNNFTVARGLLVKVITDGGLEGYGYSDLFPRTGET
Ga0114129_106498562	3300009147	Populus Rhizosphere	VKIEQIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGLEGYGYSDLFPRTG
Ga0114129_107821342	3300009147	Populus Rhizosphere	VKIDQIETTKLEMPYTKPLVTATNNFTVARGLLVKVVSNGGTEGYGYADLFPRTGETP
Ga0114129_133360681	3300009147	Populus Rhizosphere	VKIEQIETTVLEMSYTKPLVTATNNFTVARGLLVKVVTDGGLEGYGYSDLFPRTGETPETARHVIESVLRVKV
Ga0126305_108252961	3300010036	Serpentine Soil	MKIEKIDTKKLEMPYTKPLVTATNNFTVARGLLVTVVTNGGVEGYGYADLFPRAGETPET
Ga0126308_103641161	3300010040	Serpentine Soil	MKIEKIDTKKLEMPYTKPLVTATNNFTVARGLLVTVVTNGGVEGYGYADLFPR
Ga0126382_108354482	3300010047	Tropical Forest Soil	MHRLVLEERAVKIEQIETTVLEMPYKKPLVTATNNFTVARGLLVKVVTDAGVEGYGYSDLFPRTGETPQTARHTIEEIL
Ga0126372_100244311	3300010360	Tropical Forest Soil	MRIEQIETTVLEMPYTKPLVTATNYFTVAGGVLAKVVTDTGMEGYGYADLFPRTGETPETARHAIDILKPKVV
Ga0126377_133458622	3300010362	Tropical Forest Soil	VKIEQIETTVLEMPYIKPLVTATNNFTVARGILAKVVTDTAVEGYGYADLFPRTGETPETAR
Ga0126383_117691282	3300010398	Tropical Forest Soil	MKIVKIETIVLEMPYKKPLVTATNNFTVARGLLVKVMTDHGVEGYGYSDLFPRTGETPETARHV
Ga0134122_101010003	3300010400	Terrestrial Soil	MTISKVTGVETSLLEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFPRTGETPQTAQHVIDTVLKP
Ga0134123_103042191	3300010403	Terrestrial Soil	MKIGKVTNIETTILEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDL
Ga0137315_10600502	3300011395	Soil	MKIERVETKKLEMPYAKPLVTATNNFTVARGLLVTVGTNGGVEGYGYSDLFPRAGETPETAQ
Ga0137446_10486451	3300011419	Soil	MTMKIERVETKKLEMPYTKPLVTATNNFTVARGLLVTVRTNGGVEGYGYSDLFPRA
Ga0137438_12099051	3300011431	Soil	MKIDKIDTKTLEMPYTKPLVTATNNFTVARGLLVTVVTNSGVEGYGYADLFPRAGETAETAQHVIE
Ga0137329_10410211	3300012133	Soil	MKIERVETKKLEMPYTKPLVTATNNFTVARGLLVTVVTQGGVEGYGYADLFPRAGETPETAAHVIETVLKAKA
Ga0137357_11330941	3300012168	Soil	VKINRIETTKLDMPYKKPLVTATNNFTIARGLLVKAVTDEGVEGYGYSDLFPRTGETPESAAHFIDEVLQ
Ga0137382_102794442	3300012200	Vadose Zone Soil	VETEESERMKIGKVGNIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGIEGYGYSDLF
Ga0157336_10196191	3300012477	Arabidopsis Rhizosphere	MKIGKVTNIETTVLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDL
Ga0157334_10024412	3300012509	Soil	MTIGKVTGVETSLLEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFPRTGETPQTAQHVIDTVLKPKVVGR
Ga0157332_10333482	3300012511	Soil	MTIGKVTGVETSLLEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFPRTGETPQTAQHVIDTVLKPKVVG
Ga0157352_10007501	3300012519	Unplanted Soil	MTIGKVTGVETSLLEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFP
Ga0137358_100962951	3300012582	Vadose Zone Soil	MKIEQIETTVLEMPYTKPLVTATNNFTVARGLLVKVVTDGGSEGYGYSDLFPRTGETPETARHVIES
Ga0137397_100306491	3300012685	Vadose Zone Soil	MKIGKVAGVETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGVEGYGYSDLFPRT
Ga0137416_116593881	3300012927	Vadose Zone Soil	MKIGKVAGVETSLLEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFPR
Ga0137407_105619382	3300012930	Vadose Zone Soil	VKIDQIETTKLEMPYTKPLVTATNNFTVARGLLVKVVSNGGAEGYGYADLFPRTGETPGE
Ga0126375_118020492	3300012948	Tropical Forest Soil	VKIEYVETTVLEMPYNKPLVTATNNFTVARGLLVKVVTDAGVEGYGYSDLFPRTGETP
Ga0126369_111382871	3300012971	Tropical Forest Soil	MPYKKPLVTATNNFTVARGLLVKVVTDAGVEGYGYSDLFPRTGETPETARHT
Ga0075314_10010401	3300014265	Natural And Restored Wetlands	MKIGKIAKVETTILEMPYTKPLVTATNNFTVARGLLVKIITDGGIEGYGYSDLFPRSGETPQTAQH
Ga0075306_10772131	3300014297	Natural And Restored Wetlands	MKIERIDTKKLEMPYTKPLVTATNNFTVARGLLVMVVTHEGVEGYGYADLFPRSGETPETARHV
Ga0157380_117318842	3300014326	Switchgrass Rhizosphere	MKIGKVTNIETTSLEMPYTKPWVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRTGETPQTAQHVVDAVLKA
Ga0180074_10464041	3300014877	Soil	MKIAHIETRTLEMPYTKPLITATNNFTVARGLLVRAVTDAGVEGYGYSDLFPRAGETPETARHVIDAVLKPK
Ga0180062_10277532	3300014879	Soil	MKIERVETKKLEMPYIKPLVTATNNFTVARGLLVTVATNGGVEGYGYSDLFPRAGETAETAQH
Ga0180086_10260231	3300014883	Soil	LPRNSIIAALGEIPVKIIRIETTKLDMPYKKPLVTATNNFTVARGLLVKAVTDEGVEGYGYSDLFPRTSETPESAAHFIDVVLKPKVVNRDL
Ga0137418_107096431	3300015241	Vadose Zone Soil	MKIGKVAGVETRLLEMPYTKPLVTATNNFTVARGLLVKVVTDGGIEGYGYSDLFPRTGETPQTAQHVIDTVLR
Ga0132256_1004925463	3300015372	Arabidopsis Rhizosphere	MKIEKIETRVLEMPYTKPLVTATNNFTVARGLLVTVGTDRGTEGYGYSDLFP
Ga0132256_1027939681	3300015372	Arabidopsis Rhizosphere	MTTGKVTGVETSLLAMPYTKPLVTATNNFTVARGLLVKVITDGGIEGYGYSDLFPRTGETPQTAQHVIDTVLKPKVV
Ga0132255_1021516342	3300015374	Arabidopsis Rhizosphere	MTISKVTGVETRLLEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFPRTGETPQTAQHVIDTVLKPKVVGR
Ga0182039_116990021	3300016422	Soil	MKIGKVVAVETTILEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRTGETPQTAQHV
Ga0187822_100475011	3300017994	Freshwater Sediment	MKIGKVAKVETTILEMPYSKPLVTATNNFTVARGLLVKVITEGGIEGYGYSDLFPRTGETPQTAQHVIEAV
Ga0184610_12625821	3300017997	Groundwater Sediment	MKIERIETKKLEMPYTKPLVTATNNFTVARGLLVTVRTNGGVEGYGYSDLFPRAGETPETAEHVIESVLKSKVI
Ga0184638_12849391	3300018052	Groundwater Sediment	MKISSIDTRPLEMPYTKPLVTATNNFTVAHGLLVTVTTDAGIEGYGYSDLF
Ga0184635_101452851	3300018072	Groundwater Sediment	MKIEQIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGLEGYGYSDLFPRTGETPETARHV
Ga0184625_105485972	3300018081	Groundwater Sediment	MKIEQIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGLEGYGYSDLFPRTGETPETARHVIESVLRAK
Ga0184625_105723982	3300018081	Groundwater Sediment	MRIEQIETTVLEMPYTKLLVTATNNFTVARGLLVKVTTDGGLEGYGYSDLFPRTGETPETARHV
Ga0184625_105812892	3300018081	Groundwater Sediment	MKIDQIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGIEGYGYSDLFPR
Ga0184629_101946022	3300018084	Groundwater Sediment	VKINRIETTKLDMPYRKPLVTATNNFTIARGLLVKAVTDEGVEGYGYSDLFPRTG
Ga0066669_123517562	3300018482	Grasslands Soil	VETEESERMKIGKVGNIETTVLEMPYTKRLVTATNNFTVARGLLVKVITDGGIEGYGYSDLFP
Ga0190264_113924371	3300019377	Soil	MKITQVETRALEMPYTKPLVTATNNFTVARGLLVTVVTDGGTQGYGYSDLFPRTGETPETAQHVIQSVLKAKVV
Ga0210379_104615641	3300021081	Groundwater Sediment	VKINRIETTKLDMPYKKPLVTATNNFTIARGLLVKAVTDEGVEGYGYSDLFPRTGETPESAAHFIDVVLKP
Ga0210339_10269411	3300021332	Estuarine	MKIERIETKKLEMPYTKPLVTATNNFTVARGLLVTVVTDHGAEGYGYSDLFP
Ga0193709_10994302	3300021411	Soil	MKISKVTGVETSLLEMPYTKPLVTATNNFTVARGLLVKVITDGGIQGYGYSDLFPRTGETPQTAQHVIDTVLK
Ga0212128_107475151	3300022563	Thermal Springs	MKIEQIETTKLEMPYKKALITATNNFTVARGLLVKAMTDEGVEGYGYSDLFPRTGETPESAAHFI
Ga0209521_100308242	3300025164	Soil	MKIAQIETRTLEMPYTKPLVTATNNFTVARGLLIKAVTDAGVEGYGYSDLFPRSGDAGSRAPRATCCCRG
Ga0209324_100886992	3300025174	Soil	MKIAQIETRTLEMPYTKPLVTATNNFTVARGLLIKAVTDAGVEGYGYSDLFPRSGDAGS
Ga0209519_105865072	3300025318	Soil	MKIGKIANVETQILEMPYSKPLVTATNHFTVARGLLVKVVTEGGIEGYGYSDLFPRTGETPQTAQHVIESVLKTKIV
Ga0207659_101089774	3300025926	Miscanthus Rhizosphere	MKIGKVTNIETTSLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRTGETPQTAQHVID
Ga0207702_108700642	3300026078	Corn Rhizosphere	MKIGKVTNIETTSLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLF
Ga0207676_124706821	3300026095	Switchgrass Rhizosphere	MKIGKVTNIETTVLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRTGE
Ga0209761_12595041	3300026313	Grasslands Soil	VKIDQIETTKLEMPYTKPLVTATNNFTVARGLLVKVVSNGGTEGYGYADLFPRTGETPETAQHLI
Ga0256804_10270591	3300026372	Sediment	MKIEKIDTQKLEMPYTKPLVTATNNFTVARGLLVTVVTNRGVEGYGYADLFPRSGETAET
Ga0256814_10313182	3300026464	Sediment	MKIEKIDTQKLEMPYTKPLVTATNNFTVARGLLVTVVTHGGVEGYGYADLFPRSGETPET
Ga0256867_102777061	3300026535	Soil	MKIGKVATVETKILEMPYTKPLVTATNNFTVARGLLVKVITEGGIEGYGYSDLFPR
Ga0209819_101238452	3300027722	Freshwater Sediment	MKIHQIETKVHEMPYKKPLVTATNNFTVARGLLVKVITDDGVEGYGYSDLFPRTGETPET
Ga0209382_113500671	3300027909	Populus Rhizosphere	MIFIEPKEPEMKIARIETRALEMPYTKPLVTATNNFTIARGLLVTVETDGGAQGYGYSDLFPRAGE
Ga0302046_101127144	3300030620	Soil	MKIGKIAKLETTILEMPYTKPLVTASNNFTVARGLLVKVITDGGIEGYGYSDLFPRTGETPETAQHVIE
Ga0299913_111441191	3300031229	Soil	MKIGKVATVETKILEMPYTKPLVTATNNFTVARGLLVKVITEGGIEGYGYSDLFPRTGETPHTAQHVIESVLK
Ga0310886_106209102	3300031562	Soil	MKIETVETTILEMPYSKPLITATNHFTVARGLLVKVVTDGGVSGFGYSDLFPRTGETAETARHVIDVVLKPKVNGRELEN
Ga0307468_1025175401	3300031740	Hardwood Forest Soil	VRIEQIETTVLEMPYEKPLVTATNNFTVARGLLVKVITDRGVGGYGYSDLFPRTGETPETARHVIESVLRVKV
Ga0307406_106265631	3300031901	Rhizosphere	MKIETVETTILEMPYTKPLITATNHFTVARGLLVKVVTDGGAQGYGYSDLFPRTGETPETAR
Ga0310884_103844991	3300031944	Soil	MTISKVTGVETSLLEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFPRTGETPQT
Ga0326597_100033318	3300031965	Soil	MKIAQIETRTLEMPYTKPLITATNNFTVARGLLVKAVTDAGVTGYGYSDRSRQLI
Ga0307416_1010778811	3300032002	Rhizosphere	MRIETIETTVLEMPYTTPLITATNHFTVARGLLVKVVTDVGFEGYGYSDLFPRTGETPETARHV
Ga0310899_101326932	3300032017	Soil	MKINQIETTVLDMPYTKPLVTATNNFTVARGLLVKVVTDGAVEGYGYSDLFPRTGETPETARHVI
Ga0315281_102465391	3300032163	Sediment	MKIEKLETKKLAMPYTKPLVTATNNFTVARGLLVTVTTNGGVEGYGYSDLFPRTGETPET
Ga0364928_0078722_2_214	3300033813	Sediment	MKIAQIETRILEMPYTKPLITATNHFTVARGLLVKAVTDAGVEGYGYSDLFPRSGETQETARHLIEAVLKP
Ga0364930_0040290_1_162	3300033814	Sediment	MKIAQIETRLLEMPYTKPLITATNHFTVARGLLVKAVTDAGVEGYGYSDLFPRS
Ga0370498_096373_3_182	3300034155	Untreated Peat Soil	MKIEKITTRKLEMPYTKPLVTATNNFTVARGLLVTVETNGGVEGYGYSDLFPRAGETPET

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086926

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences