Metagenome / Metatranscriptome Family F086800

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086800
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	93 residues
Representative Sequence	MRRDPVTPALRLAVLARDGGCVAVALGEPPHDCGGRLTLDHVKDQPRMGKRAPSDERHLVTLCEQHHLWNGWATSHRPALRAYLAETA
Number of Associated Samples	89
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.45 %
% of genes near scaffold ends (potentially truncated)	23.64 %
% of genes from short scaffolds (< 2000 bps)	83.64 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.909 % of family members)
Environment Ontology (ENVO)	Unclassified (38.182 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (26.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.62% β-sheet: 8.62% Coil/Unstructured: 57.76%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
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SCOP family	SCOP domain	Representative PDB	TM-score
d.4.1.6: Endonuclease I	d2pu3a_	2pu3	0.58917
d.4.1.8: HNH domain from CRISPR-associated protein Cas9	d4ogca2	4ogc	0.56679
d.4.1.8: HNH domain from CRISPR-associated protein Cas9	d5axwa2	5axw	0.53184
d.4.1.8: HNH domain from CRISPR-associated protein Cas9	d4oo8a2	4oo8	0.50806

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF14090	HTH_39	11.82
PF12728	HTH_17	4.55
PF03330	DPBB_1	1.82
PF03837	RecT	1.82
PF04404	ERF	1.82
PF02195	ParBc	1.82
PF08279	HTH_11	0.91
PF01695	IstB_IS21	0.91
PF00196	GerE	0.91
PF01551	Peptidase_M23	0.91
PF14216	DUF4326	0.91
PF13392	HNH_3	0.91
PF08774	VRR_NUC	0.91
PF09588	YqaJ	0.91
PF05869	Dam	0.91
PF01844	HNH	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG3723	Recombinational DNA repair protein RecT	Replication, recombination and repair [L]	1.82
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.91

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.09 %
Viruses	superkingdom	All Organisms → Viruses	10.00 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	82.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	81.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	81.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	81.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Thermomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales	81.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	81.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.82 %
Unclassified	root	N/A	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002124\|C687J26631_10188734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	686	Open in IMG/M
3300004014\|Ga0055456_10309515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	562	Open in IMG/M
3300004050\|Ga0055491_10083561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	769	Open in IMG/M
3300004463\|Ga0063356_100018869	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6405	Open in IMG/M
3300004463\|Ga0063356_101684892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	947	Open in IMG/M
3300004463\|Ga0063356_102524640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	788	Open in IMG/M
3300004480\|Ga0062592_100882609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	803	Open in IMG/M
3300004779\|Ga0062380_10398585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	598	Open in IMG/M
3300005219\|Ga0069004_10091759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	787	Open in IMG/M
3300005294\|Ga0065705_10708444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	649	Open in IMG/M
3300005440\|Ga0070705_100046117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	2511	Open in IMG/M
3300005466\|Ga0070685_11384849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	539	Open in IMG/M
3300005545\|Ga0070695_100049175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	2699	Open in IMG/M
3300005618\|Ga0068864_100067188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	3113	Open in IMG/M
3300005824\|Ga0074474_1603108	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3266	Open in IMG/M
3300005830\|Ga0074473_10393072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	958	Open in IMG/M
3300005830\|Ga0074473_10393325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1082	Open in IMG/M
3300005901\|Ga0075274_1036146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	722	Open in IMG/M
3300006805\|Ga0075464_10532831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	720	Open in IMG/M
3300009285\|Ga0103680_10347813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	777	Open in IMG/M
3300009553\|Ga0105249_10001580	Not Available	19987	Open in IMG/M
3300010396\|Ga0134126_12393760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	575	Open in IMG/M
3300011423\|Ga0137436_1154889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	611	Open in IMG/M
3300011432\|Ga0137428_1197254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	597	Open in IMG/M
3300011439\|Ga0137432_1037147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1447	Open in IMG/M
3300011439\|Ga0137432_1254496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	564	Open in IMG/M
3300011443\|Ga0137457_1040307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1330	Open in IMG/M
3300012041\|Ga0137430_1065116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1001	Open in IMG/M
3300012045\|Ga0136623_10212750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	828	Open in IMG/M
3300012900\|Ga0157292_10186716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	684	Open in IMG/M
3300012913\|Ga0157298_10247152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	602	Open in IMG/M
3300012916\|Ga0157310_10143042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	818	Open in IMG/M
3300012916\|Ga0157310_10230886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	690	Open in IMG/M
3300013232\|Ga0170573_10979015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	868	Open in IMG/M
3300013772\|Ga0120158_10358789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	683	Open in IMG/M
3300014205\|Ga0172380_10339170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1137	Open in IMG/M
3300014205\|Ga0172380_10528980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	869	Open in IMG/M
3300014205\|Ga0172380_10986611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	597	Open in IMG/M
3300014306\|Ga0075346_1019486	All Organisms → Viruses → Predicted Viral	1185	Open in IMG/M
3300014312\|Ga0075345_1017890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1304	Open in IMG/M
3300014319\|Ga0075348_1022286	All Organisms → Viruses → Predicted Viral	1324	Open in IMG/M
3300014319\|Ga0075348_1059227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	900	Open in IMG/M
3300014325\|Ga0163163_10377276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1475	Open in IMG/M
3300014326\|Ga0157380_11561660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	714	Open in IMG/M
3300017747\|Ga0181352_1136468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	655	Open in IMG/M
3300017966\|Ga0187776_10847958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	659	Open in IMG/M
3300018032\|Ga0187788_10145285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	890	Open in IMG/M
3300018064\|Ga0187773_11038294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	540	Open in IMG/M
3300018481\|Ga0190271_10076369	All Organisms → Viruses → Predicted Viral	2984	Open in IMG/M
3300018481\|Ga0190271_11718759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	741	Open in IMG/M
3300021329\|Ga0210362_1498693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1978	Open in IMG/M
3300021852\|Ga0210317_1173166	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2250	Open in IMG/M
3300021859\|Ga0210334_10077504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1555	Open in IMG/M
3300021859\|Ga0210334_10441889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	3049	Open in IMG/M
3300021972\|Ga0193737_1010307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1273	Open in IMG/M
3300022179\|Ga0181353_1127746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	603	Open in IMG/M
3300024245\|Ga0247677_1000040	All Organisms → cellular organisms → Bacteria	9784	Open in IMG/M
3300025313\|Ga0209431_10512828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	911	Open in IMG/M
3300025319\|Ga0209520_10604345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	630	Open in IMG/M
3300025325\|Ga0209341_10395307	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300025325\|Ga0209341_10802895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	713	Open in IMG/M
3300025327\|Ga0209751_10152100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1996	Open in IMG/M
3300025925\|Ga0207650_11595227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	554	Open in IMG/M
3300025961\|Ga0207712_10007247	All Organisms → cellular organisms → Bacteria	6992	Open in IMG/M
3300026026\|Ga0210129_1107998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	574	Open in IMG/M
3300026064\|Ga0208146_1037119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	507	Open in IMG/M
3300026095\|Ga0207676_11294252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	724	Open in IMG/M
3300027378\|Ga0209981_1034723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	745	Open in IMG/M
3300027471\|Ga0209995_1028225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	937	Open in IMG/M
3300027695\|Ga0209966_1116417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	611	Open in IMG/M
3300027717\|Ga0209998_10047782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	984	Open in IMG/M
3300027831\|Ga0209797_10316137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	646	Open in IMG/M
3300027902\|Ga0209048_10742710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	644	Open in IMG/M
3300028420\|Ga0210366_10209733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	745	Open in IMG/M
3300028556\|Ga0265337_1011733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	3007	Open in IMG/M
3300028558\|Ga0265326_10037390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1380	Open in IMG/M
3300028573\|Ga0265334_10097154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1069	Open in IMG/M
3300028573\|Ga0265334_10340196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	513	Open in IMG/M
3300028654\|Ga0265322_10227606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	534	Open in IMG/M
3300028666\|Ga0265336_10187174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	615	Open in IMG/M
3300028800\|Ga0265338_10153512	All Organisms → Viruses → Predicted Viral	1786	Open in IMG/M
3300028800\|Ga0265338_10292182	All Organisms → Viruses → Predicted Viral	1187	Open in IMG/M
3300028800\|Ga0265338_10666316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	720	Open in IMG/M
3300028802\|Ga0307503_10399837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	717	Open in IMG/M
3300028802\|Ga0307503_10671648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	579	Open in IMG/M
3300028803\|Ga0307281_10262465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	637	Open in IMG/M
3300028812\|Ga0247825_10616890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	777	Open in IMG/M
3300030010\|Ga0302299_10685279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	503	Open in IMG/M
3300031240\|Ga0265320_10319034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	687	Open in IMG/M
3300031539\|Ga0307380_10088244	All Organisms → Viruses → Predicted Viral	3236	Open in IMG/M
3300031539\|Ga0307380_10106213	All Organisms → Viruses → Predicted Viral	2881	Open in IMG/M
3300031539\|Ga0307380_10551096	All Organisms → Viruses → Predicted Viral	1003	Open in IMG/M
3300031565\|Ga0307379_10117065	All Organisms → Viruses → Predicted Viral	2858	Open in IMG/M
3300031565\|Ga0307379_10136928	All Organisms → cellular organisms → Bacteria	2594	Open in IMG/M
3300031565\|Ga0307379_10398464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1320	Open in IMG/M
3300031566\|Ga0307378_10060514	All Organisms → Viruses → Predicted Viral	4135	Open in IMG/M
3300031566\|Ga0307378_10199335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1968	Open in IMG/M
3300031566\|Ga0307378_10443329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1180	Open in IMG/M
3300031578\|Ga0307376_10388862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	919	Open in IMG/M
3300031716\|Ga0310813_10155044	All Organisms → Viruses → Predicted Viral	1846	Open in IMG/M
3300031727\|Ga0316576_10429090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	978	Open in IMG/M
3300032075\|Ga0310890_11430647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	568	Open in IMG/M
3300032421\|Ga0310812_10573269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	506	Open in IMG/M
3300033483\|Ga0316629_10648071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	792	Open in IMG/M
3300033485\|Ga0316626_11743275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	563	Open in IMG/M
3300033521\|Ga0316616_100633071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1264	Open in IMG/M
3300033551\|Ga0247830_11560613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	528	Open in IMG/M
3300034123\|Ga0370479_0000098	All Organisms → cellular organisms → Bacteria	40975	Open in IMG/M
3300034128\|Ga0370490_0085391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1031	Open in IMG/M
3300034177\|Ga0364932_0200073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	758	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.64%
Host-Associated	Host-Associated	22.73%
Engineered	Engineered	3.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.00%
Aquatic	Environmental → Aquatic	23.64%
Plants	Host-Associated → Plants	22.73%
Solid Waste	Engineered → Solid Waste	2.73%
Wastewater	Engineered → Wastewater	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.64%
Marine	Environmental → Aquatic → Marine	9.09%
Sediment	Environmental → Aquatic → Sediment	8.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.18%
Freshwater	Environmental → Aquatic → Freshwater	6.36%
Landfill	Engineered → Solid Waste → Landfill	2.73%
Peat	Environmental → Terrestrial → Peat	0.91%
Floodplain	Environmental → Terrestrial → Floodplain	0.91%
Roots	Host-Associated → Plants → Roots	0.91%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.00%
Clay	Environmental → Terrestrial → Soil → Clay	9.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.18%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.18%
Loam	Environmental → Terrestrial → Soil → Loam	7.27%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.55%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.64%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.73%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	2.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.82%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.91%
Ice	Environmental → Aquatic → Freshwater → Ice	0.91%
Coastal	Environmental → Aquatic → Marine → Coastal	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.91%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.91%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.00%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	9.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.18%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	4.55%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	4.55%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.64%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.73%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.91%
Chlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated	0.91%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.91%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.91%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.91%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	9.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	9.09%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	6.36%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.45%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	4.55%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	4.55%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	4.55%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.64%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.73%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	2.73%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	1.82%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.82%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.82%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.91%
Groundwater	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated → Groundwater	0.91%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.91%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.91%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002124	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3	Environmental	Open in IMG/M
3300004014	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D2	Environmental	Open in IMG/M
3300004050	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005219	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005824	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.180_BBC	Environmental	Open in IMG/M
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental	Open in IMG/M
3300005901	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_201	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300009285	Microbial communities from groundwater in Rifle, Colorado, USA - 2A_0.1um	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300013232	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA ? S1	Engineered	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014205	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 162 metaG	Engineered	Open in IMG/M
3300014306	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D1	Environmental	Open in IMG/M
3300014312	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D1	Environmental	Open in IMG/M
3300014319	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300021329	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.625 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021852	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.23 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021859	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.306 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026026	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026064	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027378	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027471	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028420	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.641 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028654	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG	Host-Associated	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031727	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034123	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_15	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C687J26631_101887342	3300002124	Soil	VKRRTRRDPVTHDVALAVLHRDQGCVAVALGEPPSTCGGRLTLDHVKDEPRMSKRAPSDERHLVALCEQHHLWSGWATSHRPELREYLRALA*
Ga0055456_103095153	3300004014	Natural And Restored Wetlands	AVLQRDRGCVAVTLGADPADCRGRLTLDHVKDQPRMGKRAPSDMAHLASLCEGHHLGGWATSHRPDLRAYLREVTAP*
Ga0055491_100835611	3300004050	Natural And Restored Wetlands	VLYPKPVHRRGRKGTRDPVSPEMRVRVLSRDGGCVAVLLGEDPATCRGRLTLDHVKDAPRMGRRAPSDPQHLATVCEHHHLDGWATSHRPELRAYLRRV*
Ga0063356_10001886913	3300004463	Arabidopsis Thaliana Rhizosphere	MRSDAVRADVREFVLKRDGGCVAPRLAMRASESIDLCEGRLTLDHVKDQPMMGKRAPSDPAHLVTICWHHHLDGWATAHRPELREYLKGVNA*
Ga0063356_1016848922	3300004463	Arabidopsis Thaliana Rhizosphere	MKRDGVTGVVANLVLTRDRGCVAPRLGAEDGCSGRWTLDHVKDQPRMGKRAPSDPEHLVALCWHHHLDGWATSHRPELREYLRQVSPRLDSLEASG*
Ga0063356_1025246403	3300004463	Arabidopsis Thaliana Rhizosphere	MLDLAMRRDPVTPEVALTVLRRDSGCVAVSLGESPETCGGRLTLDHVKDEPRMGKRAPSDPAHLVSLCENHHLWTGWATSHRPALRLYLAMVNP*
Ga0062592_1008826091	3300004480	Soil	MTRDPVTQAVALEVLARDNGCVAVTLGEDPSSCMGRLTLDHVKDQPRLGKRAPSDPAHLVALCENHHLWTSWATSHRPQLREYLRGVA*
Ga0062380_103985851	3300004779	Wetland Sediment	MRKDAVTPELRIAVFQRDRGCIAPNLGASDWCAGPLTLDHVTDQPMMGKRAPSDAAHLVTLCRHHHIDSGWATGHRPLLRSYLAEVNR*
Ga0069004_100917592	3300005219	Natural And Restored Wetlands	MRRTPLRRTARKADPVTPEMRIAVLARDDGCVAVRLGEHADSCRGRLTLDHVKDEPRMGRRAPSDAAHLAAICEHHHLDGWATAHRPALRAYLREITR*
Ga0065705_107084441	3300005294	Switchgrass Rhizosphere	VIRGKHRRDPVSRELAIAVLQRDRGCVAPRLGGSSMDCRGRDTLDHVKDEPRMGVRAPSDMAHLVTLCEGHHLWTGWATAHRP
Ga0070705_1000461172	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKRDPVTPELREAVFRRDMGCIAPFIEKTIDLCSGRLTLDHVKDQPMMGKRAPSDMEHLVTVCWHHHLDGWATAHRPELRAYLAVMQSTPPSEKIVGWL*
Ga0070685_113848492	3300005466	Switchgrass Rhizosphere	MRRRDPVTPELRMFVLMRDNGCTAVRLGESPADCAGPLTLDHVKDQPMMGKRAPSDAAHLVSICRHHHLDGWATSHRPELRAYLAGTLA*
Ga0070695_1000491751	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	PTVRRRDPVTPDLREAVFARDRGCVAPRLGATDPCDGILTLDHVKDQPRMGVRAPSDLAHLAVICAYHHLWSGWATSHRPELREYLRSVA*
Ga0068864_1000671885	3300005618	Switchgrass Rhizosphere	MRRRDPVTPEMRMFVLMRDNGCTAVRLGESPADCAGPLTLDHVKDQPMMGKRAPSDAAHLVTLCRRHHIDTGWATSHRTELRAYLAGTLA*
Ga0074474_16031087	3300005824	Sediment (Intertidal)	MARHRDPVTADVRIAVLRRDAGCVAARLDGLYHECQGGLTLDHVKDQPRMGVRAPSDMAHLVTLCRYHHIDTGWATAHRPALREYLRTIEGGHDDSSGDETPA*
Ga0074473_103930722	3300005830	Sediment (Intertidal)	MPHKDPVSPDVYLDVIKRDRGCVAVYLGEDPAECRGRLTLDHVKDEPRMGKRAPSDPAHLVTLCERHHLWTDWATSHRPLLRAYLRGLT*
Ga0074473_103933252	3300005830	Sediment (Intertidal)	MPHKDPVSPEVYLDVIRRDAGCVAVLLGEDPADCRGRLTLDHVKDEPMMGKRAPSDPAHLVTLCEQHHLWTDWATSHRPLLRAYLRELT*
Ga0075274_10361462	3300005901	Rice Paddy Soil	VRRTPLRRSVRKADPVTPELRLEVLARDSGCVAVRLGADPAGCRGRLTLDHVKDQPRMGRRAPSDARHLASVCEAHHLDGWATAHRPELRSYLR
Ga0075464_105328312	3300006805	Aqueous	MKRHARKDPVTPELRMFVLMRDNGCIAVRLGESPADCAGRATLDHVRDEPMMGKRAPSDAAHLVTLCRRHHIDTGWATSHRPELRAYLAGTLA*
Ga0103680_103478131	3300009285	Groundwater	MTRDYVSPELAIAVFARDGGCLAPRLGGSAIDCGGRLTLDHVKDQPRMGKRAPSNPAHLATICENHHLWTGWATAHRPELRAYLLERGNR*
Ga0105249_1000158010	3300009553	Switchgrass Rhizosphere	MTRDPVTSEVRQSVLYRDGWKCVAPILGATDLCAGRLTLDHVKDQPMIGRRAPSDEQHLVTLCWHHHLDGWATSHRPELRSYLRRTI*
Ga0134126_123937602	3300010396	Terrestrial Soil	MRRDPVTPALRLAVLARDGGCVAVALGEPPHDCGGRLTLDHVKDQPRMGKRAPSDERHLVTLCEQHHLWNGWATSHRPALRAYLAETA*
Ga0137436_11548891	3300011423	Soil	VAVKRTPLRRSRRKDPVTPDLRLAVLERDGDCVAFQFSATDECRGRLTLDHVKDQPRMGVRAQSDMAHLVTVCEHHHLDGWATSHRPELREYLRGVA*
Ga0137428_11972542	3300011432	Soil	VTPELRLAVLARDGDCVAFQFSATDECRGRLTLDHVKDQPRMGKRAPSDMAHLVTVCEHHHLDGWATSHRPELREYLRGIA*
Ga0137432_10371476	3300011439	Soil	VTPELRLAVLERDGDCVAGWVCGHEGDECRGRLTLDHVKDQPRMGKRAPSDMAHLVTVCEHHHLDGWATSHRPELREYLRGVA*
Ga0137432_12544961	3300011439	Soil	VRSTPPRWRGKKDPVTPELRLAVLARDGDCVAFQFSATDECRGRLTLDHVKDQPMMGKRAPSDMAHLVTVCEWHHLGGWATSHRPELREYLRGVA*
Ga0137457_10403073	3300011443	Soil	MRSTPPRWRGKKDPVTPELRLAVLARDGDCVAFQFSATDECRGRLTLDHVKDQPRMGKRAPSDMAHLVTVCEHHHLDGWATSHRPELREYLRGVA*
Ga0137430_10651162	3300012041	Soil	MKRTPLRRSAHKDPVTADLRLAVLERDGDCVAFQFSATDECRGRLTLDHVKDEPRMGVRAPSDMAHLVTVCEHHHLDGWATSHRPELREYLRGVA*
Ga0136623_102127503	3300012045	Polar Desert Sand	MRRDPVTPEVALAVLQRDGGCVAVTLGADPAACAGRLTLDHVKSEPRMSRRAPSDPSHLVSLCEGHSEAGMRAGHQWNTAHRPALREYLRSVSV*
Ga0157292_101867161	3300012900	Soil	MRRDPVTPDLRVAVLERDQGCVAVLLGEQPSTCGGPLTLDHVKDAPRMGKRAPSDMAHLVTICEWHHIWSGWATSHRPALREYLRSVA*
Ga0157298_102471522	3300012913	Soil	VKTRRDPVTPDLRVAVIERDQGCVAVLLGEEPSTCGGPLTLDHVKDAPRMGKRAPSDMAHLVTVCEWHHIWSGWATSHRPELREYLRSVA*
Ga0157310_101430424	3300012916	Soil	MSHKDPVTPELRMAVLERDGDCVAFQFAAMDECRGRLTLDHVKDQPMMGKRAPSDMAHLVTVCEHHHLDGWATSHRPELRVYLREVNA*
Ga0157310_102308862	3300012916	Soil	MRRDPVTPDLRVAVIERDQGCVAVLLGEEPSTCGGPLTLDHVKDAPRMGKRAPSDMAHLVTVCEWHHIWSGWATSHRPELREYLRSVA*
Ga0170573_109790151	3300013232	Sediment	VLYPKPEKARGRSRKGAKDPVSPEVRVLVLLRDDGCLARRLDPGADECRGRLTLDHVKDQPRMGRRAPSDPSHLATVCEHHHLDGWATAHRPMLREYLGTV*
Ga0120158_103587893	3300013772	Permafrost	PGVTRDPVSPALRLAVLNRDKGCVAPRVCGCAGEEDPCAGRLTLDHVKDQPMMGRRAPSDMAHLATLCWHHHLGTSWATSHRPELRTYLASVA*
Ga0172380_103391702	3300014205	Landfill Leachate	VAEVRHRDPVTPELRMAVLERDGDCVAFQFSATDECRGRLTLDHVKDQPMMGKRAPSDLAHLVTVCEHHHLDGWATSHRPELRVYLREVNA*
Ga0172380_105289801	3300014205	Landfill Leachate	VKRRRRSDPVTADTYLFVIARDAGCVAVRLGADPSDCRGRLTLDHVKDQPAMSLRAPSDSAHLVSICEAHHLWNGWATSHRPELRAYLRSVA*
Ga0172380_109866112	3300014205	Landfill Leachate	MRTDPVTPEVAAAVYARDGGCVAPRLGGSSMDCDGRDTLDHVKDQPRMGKRAPSDVDHLVVMCERHHLWNGWATAHRPELRAYLASFREDVA*
Ga0075346_10194865	3300014306	Natural And Restored Wetlands	MLRRTPLRRTGRKADPVTPDVRVAVLERDRGCVAVTLGEDPADCRGRLTLDHVKDQPRMGKRAPSDARHLATVCEFHHLDGWATSHRPELRAYLEGVR*
Ga0075345_10178905	3300014312	Natural And Restored Wetlands	MMLRRTPLRRTGRKADPVTSDVRFAVLERDRGCVAVTLGEDPADCRGRLTLDHVKDQPRMGKRAPSDARHLATVCEFHHLDGWATSHRPELRAYLEATR*
Ga0075348_10222863	3300014319	Natural And Restored Wetlands	EMRVRVLSRDGGCVAVLLGEDPATCRGRLTLDHVKDAPRMGRRAPSDPRHLATVCEHHHLDGWATSHRPELRAYLRRV*
Ga0075348_10592272	3300014319	Natural And Restored Wetlands	MRRTPLRRTGRKADPVTSDVRFAVLERDRGCVAVTLGEDPGDCRGRLTLDHVKDQPRMGKRAPSDARHLATVCEFHHLDGWATSHRPELRAYLEATR*
Ga0163163_103772762	3300014325	Switchgrass Rhizosphere	MRRRDPVTPEMRIFVLMRDNGCTAVRLGESPADCAGPLTLDHVKDQPMMGKRAPSDAAHLVTLCRRHHIDTGWATSHRTELRAYLAGTLA*
Ga0157380_115616602	3300014326	Switchgrass Rhizosphere	MIRRKPQRDPVTPEMREAVFARDGYSCVAPRLGGSSMDCGGRDTLDHVRDEPRMGVRAPSDMAHLVTLCEGHHLWTGWATAHRP*
Ga0181352_11364682	3300017747	Freshwater Lake	MIRRRTRDPVTPELRVAVLERDRGCVAVTLGEDPMDCRGRLTLDHVKDAPRMGKRAPSDMAHLVALCEHHHLDGWATGHRPELRAFLRDIEVTP
Ga0187776_108479582	3300017966	Tropical Peatland	MPWPGTTDVRRADPVTPVVRLAVLERDGGCVAVRLGENPADCGGRLTLDHVKDQPRMGRRAPSDPAHLVTLCEAHHLWSGWATSHRAALRIYLAEPRP
Ga0187788_101452852	3300018032	Tropical Peatland	MRRGNNYSGARWPHARRADPVTPVVRLAVLERDGGCVAVRLGESPADCGGRLTLDHVKDQPRMGRRAPSDAAHLVTLCEAHHLWSGWATSHRAALRTYLAEPQA
Ga0187773_110382942	3300018064	Tropical Peatland	VTPEIRMYVLMRDHGCVAVTLGESPADCRGPLTLDHVKDQPMMGKRAPSDPAHLVTLCRRHHIDTGWATSHRPELRAYLAGTLA
Ga0190271_100763693	3300018481	Soil	MNRKRRSDPVTSDVALAVLNRDAGCVAVILGASPATCKGRLTLDHVRDHAAMGAKRAPSDPQHLVSLCEEHHLWSGWATSHKPQLREYLRGVA
Ga0190271_117187591	3300018481	Soil	RKRRSDPVTSDVALAVLNRDAGCVAVILGASPATCKGRLTLDHVRDHAAMGAKRAPSDPQHLVSLCEEHHLWSGWATSHKPQLREYLRGVA
Ga0210362_14986932	3300021329	Estuarine	MPHKDPVSPEVYLDVIRRDAGCVAVLLGEDPADCRGRLTLDHVKDEPMMGKRAPSDPAHLVTLCEQHHLWTDWATSHRPLLRAYLRGLT
Ga0210317_11731661	3300021852	Estuarine	ARLDRGIVARHRDPVTADVRIAVLRRDAGCVAARLDGLYHECQGGLTLDHVKDQPRMGVRAPSDMAHLVTLCRYHHIDTGWATAHRPALREYLRTIEGGHDDSSGDETPA
Ga0210334_100775042	3300021859	Estuarine	MPHKDPVSPDVYLDVIKRDRGCVAVYLGEDPAECRGRLTLDHVKDEPRMGKRAPSDPAHLVTLCERHHLWTDWATSHRPLLRAYLRGLT
Ga0210334_104418892	3300021859	Estuarine	MPHKDPVSPEVYLDVIRRDAGCVAVLLGEDPADCRGRLTLDHVKDEPMMGKRAPSDPAHLVTLCEQHHLWTDWATSHRPLLRAYLRELT
Ga0193737_10103073	3300021972	Soil	MATRMIRRKPHADPVTPDVALAVLRRDKGCVAVTLGDTPARCGGRLTLDHVRDQPGGRRAPSDMRHLVTVCEEHHIWNGWATSHRPELR
Ga0181353_11277461	3300022179	Freshwater Lake	MIRRRTRDPVTPEVRFAVLERDRGCVAVTLGEDPMDCRGRLTLDHVKDAPRMGKRAPSDMAHLVTLCEHHHLDGWATGRRPELRAYLRDIEVTP
Ga0247677_100004018	3300024245	Soil	VTPDLRLAILKRDKGCVAVLLGEPSDDCRGRLTLDHVKDQPRMGKRAPSDMAHLVAVCEWHHLEGWATSHRPELREYLRGVNECECNPELTVKGYHRVECGR
Ga0209431_105128282	3300025313	Soil	VKRDPVTPAVYNAVLRRDRGCVAPRVCGCAGEEDPCAGRLTLDHVKDQPMMGKRAPSDMAHLATLCWHHHLGSSWATSHRPELRAYLAKARGMLA
Ga0209520_106043451	3300025319	Soil	AMRDAVLTRDGGCVAPGLGAPDPCAGRLTLDHVKEQPMMGKRAPSDPAHLVSVCWHHHLDGWATSHRPELREYLVAVNRGEEVLGFLP
Ga0209341_103953072	3300025325	Soil	VTSAMRDAVLTRDGGCVAPGLGAPDPCAGRLTLDHVKEQPMMGKRAPSDPAHLVSVCWHHHLDGWATSHRPELREYLVAVNRGEEVLGFLP
Ga0209341_108028952	3300025325	Soil	VKRDPVTPAVYNAVLRRDRGCVAPRVCGCAGEEDPCAGRLTLDHVKDQPMMGKRAPSDPAHLATLCWHHHLGSSWATSHRPELRAYLAKARGMLA
Ga0209751_101521005	3300025327	Soil	VVPHHPQERRRVAADHRGVKRDPVTPAVYNAVLRRDRGCVAPRVCGCAGEEDPCAGRLTLDHVKDQPMMGKRAPSDPAHLATLCWHHHLGSSWATSHRPELRAYLAKARGMLA
Ga0207650_115952272	3300025925	Switchgrass Rhizosphere	MRRRDPVTPEMRMFVLMRDNGCTAVRLGESPADCAGPLTLDHVKDQPMMGERAPSDAAHLVTLCRRHHIDTGWATSHRTELRAYLAGTLA
Ga0207712_100072475	3300025961	Switchgrass Rhizosphere	MTRDPVTSEVRQSVLYRDGWKCVAPILGATDLCAGRLTLDHVKDQPMIGRRAPSDEQHLVTLCWHHHLDGWATSHRPELRSYLRRTI
Ga0210129_11079983	3300026026	Natural And Restored Wetlands	PEVRIAVLARDDGCVAVRLGEHADSCRGRLTLDHVKDEPRMGRRAPSDAAHLAAICEHHHLDGWATAHRPALRAYLREITR
Ga0208146_10371192	3300026064	Natural And Restored Wetlands	MLRRTPLRRTGRKADPVTSDVRFAVLERDRGCVAVTLGEDPADCRGRLTLDHVKDQPRMGKRAPSDARHLATVCEFHHLDGWATSHRPELRAYLEATR
Ga0207676_112942522	3300026095	Switchgrass Rhizosphere	MRRRDPVTPEMRMFVLMRDNGCTAVRLGESPADCAGPLTLDHVKDQPMMGKRAPSDAAHLVTLCRRHHIDTGWATSHRTELRAYLAGTLA
Ga0209981_10347233	3300027378	Arabidopsis Thaliana Rhizosphere	MTRDPVTQAVALEVLARDNGCVAVTLGEDPSSCMGRLTLDHVKDQPRMGKRAPSDPAHLVALCFSHHLNGWATAHRPQL
Ga0209995_10282253	3300027471	Arabidopsis Thaliana Rhizosphere	MTRDPVTQAVALEVLARDNGCVAVTLGEDPSSCMGRLTLDHVKDQPRMGKRAPSDPAHLVALCFSHHLNGWATAHRPQLREYLRGVA
Ga0209966_11164171	3300027695	Arabidopsis Thaliana Rhizosphere	MTRDPVTQAVALEVLARDNGCVAVTLGEDPSSCMGRLTLDHVKDQPRMGKRAPSDPAHLVALCFSHHLNGWATSHRPQLREYLRGVA
Ga0209998_100477821	3300027717	Arabidopsis Thaliana Rhizosphere	MTRDPVTQAVALEVLARDNGCVAVTLGEDPSSCMGRLTLDHVKDQPRMGKRAPSDPAHLVALCENHHLWTSWATSHRPQLREYLRGVA
Ga0209797_103161373	3300027831	Wetland Sediment	DVVRRDPVTPEVRLAVLERDGGCVAVRVGADPGDCRGRLTLDHVKDYPMMGKRAPSDPAHLASICERHHLGGWATSHRPELREYLREVTA
Ga0209048_107427103	3300027902	Freshwater Lake Sediment	KTWNDVVDRDRGCIAPRLDPSQSGMCSGRLTIDHVREQAMMGKRAPSDMSHLVTLCIFHHLYGWATSHRPLLRAYLSSLKEGNGA
Ga0210366_102097333	3300028420	Estuarine	AARLDRGIVARHRDPVTADVRIAVLRRDAGCVAARLDGLYHECQGGLTLDHVKDQPRMGVRAPSDMAHLVTLCRYHHIDTGWATAHRPALREYLRTIEGGHDDSSGDETPA
Ga0265337_10117333	3300028556	Rhizosphere	MNRRPIRRHAHKDPVTPEMRQAVLERDGRTCVKPKIEPNTPDSTCFGPLTLDHVRDFAMLGKRAPSDMAHLVTICWNHHIIDGWATSHRPELRAYLEAVNERS
Ga0265326_100373901	3300028558	Rhizosphere	VRKTELTRRSPIRRHATRDPVTPELRQAVLERDGGCVALMIGEHVPGVVGRLPFSTCIGRLTLDHVREQPMMGKRAPSDLAHLVTLCEHHHLDGWATSHRPELRAYLEAVNAAQ
Ga0265334_100971541	3300028573	Rhizosphere	VNRRPIRRHATRDPVTPELRQAVLERDGGCVALMIGEHVPGVVGRLPFSTCIGRLTLDHVREQPMMGKRAPSDMAHLVTLCEHHHLDGWATSHRPELRAYLETVA
Ga0265334_103401961	3300028573	Rhizosphere	PVSSELRLAVLERDGGCVARLFDEELMYCRGRLTLDHVKSEARMGVRAPSDLLHLVTLCSWHHLESGWATSHRHELRAYLRRVNHLAAFSPEEEHPV
Ga0265322_102276061	3300028654	Rhizosphere	RHAHKDPVTPEMRQAVLERDGRTCVKPKIEPNTPDSTCFGPLTLDHVRDFAMLGKRAPSDMAHLVTICWNHHIIDGWATSHRPELRAYLEAVNERS
Ga0265336_101871741	3300028666	Rhizosphere	MNRRPIRRHAHKDPVTPEMRQAVLERDGGCVAPWLCFETGAEAACSGRLTLDHVREQPMMGKRAPSDMAHLVTLCEHHHLDGWATSHRPELRAYLESVA
Ga0265338_101535122	3300028800	Rhizosphere	VRKTELTRRSPIRRHATRDPVTPELRQAVLERDGGCVALMIGEHVPGVVGRLPFSTCIGRLTLDHVREQPMMGKRAPSDMAHLVTLCEHHHLDGWATSHRPELRAYLETVA
Ga0265338_102921823	3300028800	Rhizosphere	MKRSPIKRHPHKDPVTPALRLAVLERDHEACVAPWIELFSGSGELRLLGICRGRLTLDHVQDGGGRMGKRAPSDMAHLVTLCEHHHLDGWATSHRPELRAYLEAVNAAQ
Ga0265338_106663163	3300028800	Rhizosphere	MNRRPIRRHAHKDPVTPEVRQAVLERDGFDCVEPLVWGTLDCAGRLTLDHVQDGGGRMGKRAPSDMAHLVTLCEHHHLDGWATSHRPELRAYLEAVNA
Ga0307503_103998371	3300028802	Soil	MTHKDPVTAELRLAVLERDGDCVAFQFSATDECSGRLTLDHVKDQPMMGKRAPSDMAHLVTVCEHHHLDGWATSHRPELRQYLREIGDARVQ
Ga0307503_106716481	3300028802	Soil	MKRSTMRRQRTRVDPVTPDVRLFVLERDHGCVAVTLGENMGDCRGRLTLDHVKDQPRMGKRAPSDPQHLVSVCEWHHLYGWATANRPALREYLRSVAA
Ga0307281_102624653	3300028803	Soil	RLRLGAGAMRRDLVTPDLRVAVIERDQGCVAVLLGEEPSTCGGRLTLDHVKDAPRMGKRAPSDMAHLVTVCEWHHIWSGWATSHRPALREYLRSVA
Ga0247825_106168904	3300028812	Soil	SGGSTDARLSAMRRDAVRADVREFVLERDGGCVATRIASERQWAIDSCEGRLTLDHVKDQPMMGRRAPSDPKHLVTICWHHHLDGWATAHRPELREYLKGVNA
Ga0302299_106852792	3300030010	Fen	VTPELRESVLERDGWACVAPRLGASDPCSGRLTLDHVKDQPRMGVRAPSDRAHLATLCEFHHLDGWATAHRPELREYLEGVSR
Ga0265320_103190343	3300031240	Rhizosphere	MNRRPIRRHAHKDPVTPEMRQAVLERDGRTCVKPKIEPNTPDSTCFGPLTLDHVRDFAMLGKRAPSDMAHLVTICWNHHIIDG
Ga0307380_100882442	3300031539	Soil	MTRRDPVTREVALEVLHRDKGCVAVWLGESGRDCRGRLTLDHVKDQPMMGKRAPSDPAHLVSLCQWHHVETGWATSHRPELREYLKEVSA
Ga0307380_101062133	3300031539	Soil	MTDRVTREVALEVLHRDKGCVAVWLGESGRDCRGRLTLDHVKDQPMMSKRSPSDAAHLVSLCEHHHLETGWATSHRPELREYLREVSA
Ga0307380_105510961	3300031539	Soil	MARHRDPVTAEVRIAVLRRDAGCVAPRLGAAYHECAGPLTLDHVKDQPRMGQRAPSDMAHLVTICRYHHIDTPWATSHRPELREYLRSVEGA
Ga0307379_101170652	3300031565	Soil	MARHRDPVTAEVRIAVLRRDAGCVAPRLGAAYHECAGPLTLDHVKDQPRMGQRAPSDMAHLVTICRYHHIDTPWATSHRPELREYLRSVEGAHDDPDEPNP
Ga0307379_101369284	3300031565	Soil	MTDRVTREVALEVLHRDKGCVAVWLGESGRDCRGRLTLDHVKDQPMMGKRAPSDPAHLVSLCQWHHVETGWATSHRPELREYLKEVSA
Ga0307379_103984642	3300031565	Soil	VRGGDPVTREVALEVLHRDKGCVAVWLGESGRDCRGRLTLDHVKDQPMMGKRSPSDAAHLVSLCQWHHVETGWATSHRPELREYLRSVAPVG
Ga0307378_100605143	3300031566	Soil	MTRRDPVTREVALEVLHRDKGCVAVWLGESGRDCRGRLTLDHVKDQPMMSKRSPSDAAHLVSLCEHHHLETGWATSHRPELREYLREVSA
Ga0307378_101993352	3300031566	Soil	MARHRDPVTAEVRIAVLRRDAGCVAPRLGAAYHECAGPLTLDHVKDQPRMGQRAPSDIAHLVTICRYHHIDTPWATSHRPELREYLRSVEGAHDDPDEPNP
Ga0307378_104433291	3300031566	Soil	VALEVLHRDKGCVAVWLGESGRDCRGRLTLDHVKDQPMMGKRAPSDAAHLVSLCQWHHVETGWATSHRPELREYLKEVSA
Ga0307376_103888622	3300031578	Soil	MRRDPVTREVALEVLHRDKGCVAVWLGESGRDCRGRLTLDHVKDQPMMSKRSPSDAAHLVSLCEHHHLETGWATSHRPELREYLKEVSA
Ga0310813_101550444	3300031716	Soil	VKHRDPVSPELREAVLRRDRGCVAPRLGATEYDCHGRLTLDHVKDQPMMGKRAPSDLSHLATLCWTHHLDGWATSHRPQLREYLARVNAGETVVAWL
Ga0316576_104290903	3300031727	Rhizosphere	VRRDPVTSEVRLAVLQRDHGCVAVELGADPGDCRGPLTLDHVKDQPRMGKRAPSDPAHLVTLCRFHHLDSGWATGHRPELRAYLRSVNDG
Ga0310890_114306472	3300032075	Soil	DVRSRVLARDGRCAAPAIDPAVDLCAGRTTLDHVKDAPMMGKRAPSDDAHLVALCWHHHLDGWATSHRPALRDHLRRHGVDGVRSRQG
Ga0310812_105732692	3300032421	Soil	VKHRDPVSPELRDAVLRRDAGCVAPRLGATEYDCHGRLTLDHVKDQPMMGKRAPSDLSHLATLCWTHHLDGWATSHRPQLREYLARVNAGETVVGWL
Ga0316629_106480712	3300033483	Soil	MAALMLYPKPAPRGKRSRDPVRPELRIEVLTRDGGCVAGLMGEPDCRGRLTLDHVKDQLRMGRRAPSDARHLVSLCEHHHLDGWATSHRDELREYLRNL
Ga0316626_117432751	3300033485	Soil	GLRRVRLGAGAMTRDPVTPDVYIAVIQRDRGCVAVTLGADPGDCRGRLTLDHVKDQPRMGRRAPSDDAHLVTLCEAHHLWNGWATSHRPELREYLRSVS
Ga0316616_1006330712	3300033521	Soil	MAALMLYPKPAPRGKRSRDPVRPELRIEVLTRDGGCVAGLMGEPDCRGRLTLDHVKDQLRMGRRAPSDARHLVSLCEHHHLDGWATSHRDELREYLRNP
Ga0247830_115606131	3300033551	Soil	SAMRRDAVRADVREFVLERDGGCVATRIASERQWAIDSCEGRLTLDHVKDQPMMGRRAPSDPKHLVTICWHHHLDGWATAHRPELREYLKGVNA
Ga0370479_0000098_7302_7583	3300034123	Untreated Peat Soil	MRRYPYRDVVTPDVALAVLTRDQGCVAVKLGASPAACRGRITLDHVRDHAAMGGRRAPSDAAHLVSICAGHHLENGWATSHRPELREYLRNVT
Ga0370490_0085391_454_747	3300034128	Untreated Peat Soil	MLRRTPLRRTRKADPVTPDLRLAVLARDFGCVAVTLGEDPGDCRGRLTLDHVKDQPRMGKRAPSDAAHLVSVCEHHHLDGWATSHRPELREYLEGVR
Ga0364932_0200073_66_323	3300034177	Sediment	MRDGVTPILRDAVLRRDRGCVAPRLYDTDPCSGRLTLDHVKDQPRMGKRAPSDVAHLVTLCWHHHLDGWATSHRPELRAYLRGAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086800

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences