NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F086233

Metagenome Family F086233

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F086233
Family Type Metagenome
Number of Sequences 111
Average Sequence Length 67 residues
Representative Sequence MNTLPVETIKFLQTVLDETWESLRPEERSRTSKKQIAARLFEKAIAGERDPFRLRIAAIDGIVTFPL
Number of Associated Samples 93
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.90 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (99.099 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(18.018 % of family members)
Environment Ontology (ENVO) Unclassified
(31.532 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(54.054 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.37%    β-sheet: 0.00%    Coil/Unstructured: 52.63%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.74.1.0: automated matchesd3mi9b13mi90.69372
a.128.1.0: automated matchesd5c05a25c050.68794
a.211.1.0: automated matchesd2r8qa_2r8q0.67556
a.74.1.1: Cyclind2i53a12i530.67087
a.204.1.1: Type II deoxyuridine triphosphatased1w2ya_1w2y0.66111


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF12847Methyltransf_18 1.80
PF00535Glycos_transf_2 1.80
PF13545HTH_Crp_2 0.90
PF13467RHH_4 0.90
PF10908DUF2778 0.90
PF13531SBP_bac_11 0.90
PF13641Glyco_tranf_2_3 0.90
PF01168Ala_racemase_N 0.90
PF04519Bactofilin 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG1664Cytoskeletal protein CcmA, bactofilin familyCytoskeleton [Z] 0.90


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.10 %
All OrganismsrootAll Organisms0.90 %

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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004480|Ga0062592_100302945Not Available1211Open in IMG/M
3300015372|Ga0132256_100099341All Organisms → cellular organisms → Bacteria2832Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil18.02%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil12.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere10.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere6.31%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere6.31%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.60%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.70%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.70%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.70%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.80%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.80%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.90%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.90%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.90%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.90%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.90%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.90%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.90%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.90%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.90%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.90%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.90%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.90%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.90%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.90%
Sugar Cane Bagasse Incubating BioreactorEngineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor0.90%

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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000156Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobicEngineeredOpen in IMG/M
3300000580Forest soil microbial communities from Amazon forest - 2010 replicate II A01EnvironmentalOpen in IMG/M
3300001904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2Host-AssociatedOpen in IMG/M
3300001976Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7Host-AssociatedOpen in IMG/M
3300001979Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6Host-AssociatedOpen in IMG/M
3300003911Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300012505Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610Host-AssociatedOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300022892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5EnvironmentalOpen in IMG/M
3300022899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6EnvironmentalOpen in IMG/M
3300023261Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027425Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A2-10 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300034820Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
deepsgr_011479002199352025SoilMNALTPETLQLLQTVLDETWESLRPEEKSRTTKAEIGKRLLERAKAGERDAFRLRLAAVSGVVTFAL
ICChiseqgaiiDRAFT_070077213300000033SoilPETVKLLQTVLDETWESLRPEERSRTSKKQIAARLFDKARAGERDPFRLRVAAIHGIVTFPL*
NODE_062193223300000156Sugar Cane Bagasse Incubating BioreactorMNTLPPETAKLLQTVLDETWESLRPEERSRTSKKEIAARLFEKARAGEKDQFRLRVAAINGIVTSSL*
AF_2010_repII_A01DRAFT_104564013300000580Forest SoilLVVEMDALTSDTLKLLQVVLDETWESLRPEERSRTSRKQIAARILEKARAGERDPLRLRIAAVNGVVTSPL*
JGI24736J21556_103976643300001904Corn RhizosphereMKTIPPETIKLLQTVLDETWETLRPEERSRTSKKQIATRLFDKASAGERDPFRLRIAAVDGIVK
JGI24752J21851_105080323300001976Corn, Switchgrass And Miscanthus RhizosphereETIKLLQTVLDETWETLRPEERSRTSKKQIATRLFDKASAGERDPFRLRIAAVDGIVKFPL*
JGI24740J21852_1002518323300001979Corn RhizosphereMKTIPPETIKLLQTVLDPATRGTITNGKKQIATRLFDKASAGERDPFRLRIAAVDGIVKSTLDKIVGRTKKPEIE*
JGI25405J52794_1005517423300003911Tabebuia Heterophylla RhizosphereMKTIPPETIKLLQTVLDETWETLRPEERSRTSKKQIATRLFDKASAGERDPFRLRIAAVDGIVKFPL*
Ga0062593_10014451323300004114SoilVSALPPETVKLLQSVLDDTWESLRPEERSRTSKKQIAARLFDKARAGERDPFRLRVAVMDGIVTSLL*
Ga0062593_10026858233300004114SoilMNTLPVETIKFLQTVLDETWESLRPEERSRTSKKQIAARLFEKAIAGERDPFRLRIAAIDGIVTFPL*
Ga0062589_10078885023300004156SoilDDLIGFSKMNPLPPETIELLQNVLDETWESLRPEERSRTSEEQIAIRLLDKARAGEKNPFRLRIAAIDGIVTFPL*
Ga0062589_10131800913300004156SoilMNTMPPETIKLLQNVLDETWESLRPDERARTSKEQIAMRLFDKARAGERDPFRLRIAAIDGIVTFPL*
Ga0062590_10083893823300004157SoilQNVLDETWESLRPEERSRTSEEQIAIRLLDKARAGEKNPFRLRIAAIDGIVTFPL*
Ga0063356_10215737313300004463Arabidopsis Thaliana RhizosphereMNTLPQETLKLLQTVLDETWEALRPEERSRTSKKQIAARLFEKVRAGERDPFRLRIAAIDGIVTFPL*
Ga0062595_10006154313300004479SoilMVTLNPETLTLLQSVLDETWDSLRPEEKSRTSKEQIGARLLEKARAGEMDPFRLRIAAVSGVVTSPL
Ga0062595_10017438813300004479SoilMGRYGSRKMNTLSSETIELLQTVVDETWDALRPEEKLRTSRERIAARLFDEARAGERDPLRLRIAAIEGVVTSAL*
Ga0062595_10228617213300004479SoilMNTLPLETLNFLQTVLDETWESLRPEERSRTSKKQIAARLFEKARAGERDPLRLRIAAIVGIVTLPL*
Ga0062592_10030294533300004480SoilMNTLPLETLNFLQTVLDETWESLRPEERSRTSKKQIAARLFEKARAGERDPFRLRIAAIVGIVTLPL*
Ga0062592_10257276223300004480SoilVTALPPETAKLLQSVLDDTWESLRPEERSRTSRQQIAARLLDKARAGERDPFRLRIAAIHGIVTSPL*
Ga0062591_10131598723300004643SoilMSPETIKLLQNVLDETWESLRPDERARTSKEQIAMRLFDKARAGERDPFRLRIAAIDGIVTFPL*
Ga0062594_10032418413300005093SoilMVTLNPETLTLLQSVLDETWDSLRPEEKSRTSKEQIGARLLEKARAGEMDPFRLRIAAVSGVVTSPL*
Ga0062594_10187754513300005093SoilLLQTVVDETWDALRPEEKLRTSRERIAARLFDEARAGERDPLRLRIAAIEGVVTSAL*
Ga0065715_1065272313300005293Miscanthus RhizosphereIKLLQSVLDETWESLRPEERSRTSKKQIAARLFDKARTGERDPFRLRIAAIHGTVTFPL*
Ga0070670_10142023913300005331Switchgrass RhizosphereYLVAHLVIPSIGRYGSRKMNTLSSETIELLQTVVDETWDALRPEEKLRTSRERIAARLFNEARVGERDPFRLRIAAIEGVVTSAL*
Ga0066388_10486183713300005332Tropical Forest SoilMNTLSSETIELLQTVVDETWDALRPEEKRRTSRERIAERLFDKARAGERDPSRLRIAAIEGVVTSAL*
Ga0070666_1135496513300005335Switchgrass RhizosphereASLVIMVTLNPETLTLLQSVLDETWDSLRPEEKSRTSKEQIGARLLEKARAGEMDPFRLRIAAVSGVVTSPL*
Ga0070680_10032831013300005336Corn RhizosphereMATLNPETLTLLQSVLDETWDSLRPEEKSRTSKEQIGARLLEKARAGEMDPFRLRIAAVSGVVTSPL*
Ga0070660_10158975813300005339Corn RhizosphereMGRYGSRKMNTLSSETIELLQTVVDETWDALRPEEKLRTSRERIAARLFDEARAGERDPLRLRIAAIEGV
Ga0070669_10144940213300005353Switchgrass RhizosphereMNTLPLETLNFLQTVLDETWESLRPEERSRTSKKQIAARLFEKARAGERDPLRLR
Ga0070671_10117700013300005355Switchgrass RhizosphereRKMNTLSSETIELLQTVVDETWDALRPEEKLRTSRERIAARLFDEARAGERDPLRLRIAAIEGVVTSAL*
Ga0070673_10075912523300005364Switchgrass RhizosphereMKTIPPETIKLLQTVLDETWETLRPEERSRTSKKQIATRLFDKASAGERDPFRLRIAA
Ga0070709_1081528223300005434Corn, Switchgrass And Miscanthus RhizosphereMNTLPPETITLLQTLVDETWNSLRPEEKLRTSRERIAARLFDKARAGERDPFRLRIAAIKGVVTSAL*
Ga0070713_10019368223300005436Corn, Switchgrass And Miscanthus RhizosphereMNALTPETLEFLQTVLDETWESLRPEEKSRTTKAEIGKRLLERAKAGERDAFRLRLAAVNGVVTFTL*
Ga0070681_1040129023300005458Corn RhizosphereMNTLPPETAKLLQTLLDETWESLRPEERSRTSKKEIAARLFEKARAGEKDQFRLRVAAINGIVTSSL*
Ga0070695_10041096923300005545Corn, Switchgrass And Miscanthus RhizosphereMNALNPETLQLLQTVLDETWESLRPEEKSRTTKAEIGRRLLERAKAGERDAFRLRLAAVSGIVTFAL*
Ga0070696_10056334713300005546Corn, Switchgrass And Miscanthus RhizosphereQQMNTLPPETAKLLQTVLDETWESLRPEERSRTSKKEIAARLFEKARAGEKDQFRLRVAAINGIVTSSL*
Ga0070693_10153461913300005547Corn, Switchgrass And Miscanthus RhizosphereMGRYGSRKMNTLSSETIELLQTVVDETWDALRPEEKLRTSRERIAARLFDEARAGKRDPLRLRIAAIEGVVTSAL*
Ga0070704_10121237123300005549Corn, Switchgrass And Miscanthus RhizosphereETIKLLQSVLDETWESLRPEERSRTSKKQIAARLFDKARTGERDPFRLRIAAIHGTVTFPL*
Ga0068864_10079622123300005618Switchgrass RhizosphereMNTLPSETVKLLQTLVDETWNSLRPEERLRTSRERIAARLFDKARAGERDPFRLRIAAIKGVVTSAL*
Ga0066903_10101515733300005764Tropical Forest SoilMKTIPPETIKLLQTVLDETWETLRPEERSRTSKKQIATRLFDKASAGERDPFRLRIAAVNGIVKFQL*
Ga0068870_1081163313300005840Miscanthus RhizosphereVVVSALPPETIKLLQSVLDETWESLRPEERSRTSKKQIAARLFDKARTGERDPFRLRIAAIHGTVTFPL*
Ga0070717_1046032113300006028Corn, Switchgrass And Miscanthus RhizosphereMNTLPPETITLLQTLVDETWNSLRPEERLRTSRERIAARLFDKARAGERDPFRLRIAAIKGVVTSAL*
Ga0070717_1120853013300006028Corn, Switchgrass And Miscanthus RhizosphereMNALTAETLQLLQTVLDETWESLRPEEKSRTTKAEIGERLLEGAKAGERDAFRLRLAAVRGVVTSAL*
Ga0070715_1032737613300006163Corn, Switchgrass And Miscanthus RhizosphereMNALNPETLQLLQTVLDETWESLRPEEKSRTTKAEIGKRLLERAKAGERDAFRLRLAAVNGVVTFTL*
Ga0097621_10154871023300006237Miscanthus RhizosphereMNALTAETLQLLQTVLDETWESLRPEEKSRTTKAEIGERLLERAKAGERDAFRLRLAAVSGVVTSAL*
Ga0068865_10137533013300006881Miscanthus RhizosphereETIKLLQSVLDETWESLRPEERSRTSKKQIAARLFDKARTGERDPFRLRIAAIHGIVTFPL*
Ga0111539_1317489413300009094Populus RhizosphereWSGDVVVSALPPETIKLLQSVLDETWESLRPEERSRTSKKQIAARLFDKARTGERDPFRLRIAAIHGIVTFPL*
Ga0105245_1035009713300009098Miscanthus RhizosphereMNTLSSETIELLQTVVDETWDALRPEEKLRTSRERIAARLFDEARAGERDPLRLRIAAIEGVVTSAL*
Ga0105241_1122808813300009174Corn RhizosphereMNALNPETLQLLQTVLDETWESLRPEEKSRTTKAEIGRRLLERAKAGERDALRLRLAAVSGIVTFAL*
Ga0105242_1002053923300009176Miscanthus RhizosphereMNTLSSETIELLQTVVDETWDALRPEEKLRTSRERIAARFFDEARAGERDPLRLRIAAIEGVVTSAL*
Ga0105242_1137865713300009176Miscanthus RhizosphereMNALSPETLQLLQTVLDETWESLRPEEKSRTTKAEIGRRLLERAKAGERDAFRLRLAAV
Ga0105242_1210382513300009176Miscanthus RhizosphereMTTIKPRDLNTLPSETVKLLQTLVDETWNCLRPEEKLRTSRERIAARLFDKARAGERDPFRLRIAAIKGVVTSAL*
Ga0105242_1270073013300009176Miscanthus RhizosphereWSGDVVVSALPPETIKLLQSVLDETWEALRPEERSRTSKKQIAARLFDKARAGERDPFRLRVAAIHGIVTFPL*
Ga0126378_1233151613300010361Tropical Forest SoilVVEMDALTSDTLKLLQVVLDETWESLRPEERSRTSRKQIAARILEKARAGERDPLRLRIAAVNGVVTSPL*
Ga0134125_1102498723300010371Terrestrial SoilMNALTTETLQLLQTVLDETWESLRPEEKSRTTKAEIGERLLEGAKAGERDAFRLRLAAVRGVVTSAL*
Ga0134125_1198345013300010371Terrestrial SoilTIKLLQTLVDETWNSLRPEEKLRTSRERIAARLFDRARAGERDPFRLRIAAIKGVVTSAL
Ga0134128_1171525723300010373Terrestrial SoilMNMLPPETAKLLQTVLDETWESLRPEERSRTSKKEIAARLFEKARAGEKDQFRLRVAAINGIVTSSL*
Ga0134124_1164586323300010397Terrestrial SoilALPPETIKLLQSVLDETWESLRPEERSRTSKKQIAARLFDKARTGERDPFRLRIAAIHGTVTFPL*
Ga0157339_104000813300012505Arabidopsis RhizosphereFGCWSGDVVVSALPPETIKLLQSVLDETWESLRPEERSRTSKKQIAARLFDKARAGERDPFRLRVAAIHGIVTFPL*
Ga0157291_1035484713300012902SoilVSALPPETIKLLQSVLDETWESLRPEERSRTSKKQIAARLFDKARAGERDPFRLRVAAIHGI
Ga0157290_1030375013300012909SoilVSALPPETIKLLQSVLDETWESLRPEERSRTSKKQIAARLFDKARTGERDPFRLRIAAIHGTVTF
Ga0164298_1010826823300012955SoilGFCRTAIKASLVIMVTLNPETLTLLQSVLDETWDSLRPEEKSRTSKEQIGARLLEKARAGEMDPFRLRIAAVSGVVTSPL*
Ga0164298_1012715733300012955SoilMNALNPETLQLLQNVLDETWESLRPEEKSRTTKAEIGRRLLERAKAGERDAFRLRLAAV
Ga0164303_1014865613300012957SoilTLVDETWNSLRPEEKLRTSRERIAARLFDKARAGERDPFRLRIAAIKGVVTSAL*
Ga0164303_1038514413300012957SoilMNALNPETLQLLQNVLDETWESLRPEEKSRTTKAEIGRRLLERAKAGERDAFRLRLAAVSGVVTFAL*
Ga0164299_1019385633300012958SoilMNTLPPETITFLQTLLDETWNALRPEEKFRTSRERIAARLFDKARAGERDPFRLRIAAIKGVVTSAL*
Ga0164299_1126217713300012958SoilMNTLPLETLNFLQTVLDETWESLRPEERSRTSKKQIAARLFEKARAGERDPLRLRIAAIVGI
Ga0164301_1165588813300012960SoilFGCWSGDVVVSALPPETIKLLQSVLDETWESLRPEERSRTSKKQIAARLFDKARTGERDPFRLRIAAIHGTVTFPL*
Ga0164302_1029141723300012961SoilMNALTTETLQLLQTVLDETWESLRPEEKSRTTKAEIGKRLLERAKAGERDAFRLRLAAVSGVVTFAL*
Ga0164302_1130730913300012961SoilTVVDETWDALRPEEKLRTSRERIAARLFDEARAGERDPLRLRIAAIEGVVTSAL*
Ga0164309_1028284123300012984SoilMNALTAETLQLLQTVLDETWESLRPEEKSRTTKAEIGKRLLERAKAGERDAFRLRLAAVNGVVTFTL*
Ga0164309_1175197313300012984SoilMNALNPETLQLLQNVLDETWESLRPEEKSRTTKAEIGKRLLERAKAGERDAFRLRLAAVSGVVTFAL*
Ga0164308_1024476323300012985SoilMNALNPETLQLLQTVLDETWESLRPEEKSRTTKAEIGKRLLERAKAGERDAFRLRLAAVSGVVTFAL*
Ga0164304_1016867023300012986SoilMNALTPETLQLLQTVLDETWESLRPEEKSRTTKAEIGRRLLERAKAGERDAFRLRLAAVRGVVTSAL*
Ga0164306_1135466613300012988SoilMNALNPETLQLLQNVLDETWESLRPEEKSRTTKAEIGKRLLERAKAGERDAFRLRLAA
Ga0164305_1133243513300012989SoilTVLDETWESLRPEEKSRTTKAEIGRRLLERAKAGERDAFRLRLAAVRGVVTSAL*
Ga0157374_1064177213300013296Miscanthus RhizosphereSLVIMVTLNPETLTLLQSVLDETWDSLRPEEKSRTSKEQIGARLLEKARAGEMDPFRLRIAAVSGVVTSPL*
Ga0163162_1156346113300013306Switchgrass RhizosphereMSDRNHGPRKMNTLPSETVKLLQTLVDETWNSLRPEEKLRTSRERIATRLFDKARAGERDPFRLRIAAIKGVVTSAL*
Ga0157375_1046358123300013308Miscanthus RhizosphereMNTLQPETITFLQTLVDETWNSLRPEERLRTSRERIAARLFDKARAGERDPFRLRIAAIKGVVTSAL*
Ga0163163_1015946233300014325Switchgrass RhizosphereMNTLSSETIELLQTVVDETWDALRPEEKLRTSRERIAARLFNEARVGERDPFRLRIAAIEGVVTSAL*
Ga0157379_1083989223300014968Switchgrass RhizosphereMNTLPPETITFLQTLVDETWDFLRPEEKLRTSRERIAARLFDKARAGERDPFRLRIAAIKGVVTSAL*
Ga0132258_1134099633300015371Arabidopsis RhizosphereMNALNPETLQLLQNVLDETWESLRPEEKSRTTKAEIGKRLLERAKAGERDAFRLRLAAVSGIDTFAL*
Ga0132256_10009934123300015372Arabidopsis RhizosphereMNTLPPETIKLLQIVLDETWESLRPEERSRTSKKQIAACLFDKARAGERDPLRLRIAAIDGIVTFPL*
Ga0132256_10093232323300015372Arabidopsis RhizosphereMNALNPETLQLLQTLLDETWESLRPEEKSRTTKAEIGKRLLDRAEAGERDAFRLRLAAVSGVVTFAL*
Ga0173482_1017342713300019361SoilMKTIPPETIKLLQTVLDETWETLRPEERSRTSKKQIATRLFDKASAGERDPFRLRIAAVDGIVKFPL
Ga0247753_104944513300022892SoilMKTIPPETIKLLQTVLDETWETLRPEERSRTSKKQIATRLFDKASAGERDPFRLRIAAVDGI
Ga0247795_105338813300022899SoilVSALPPETIKLLQSVLDETWESLRPEERSRTSKKQIAARLFDKARTGERDPFRLRIAAIHGIVTF
Ga0247796_104729413300023261SoilMKTIPPETIKLLQTVLDETWETLRPEERSRTSKKQIATRLFDKASAGERDPFRLRI
Ga0207680_1123728313300025903Switchgrass RhizosphereASLVIMVTLNPETLTLLQSVLDETWDSLRPEEKSRTSKEQIGARLLEKARAGEMDPFRLRIAAVSGVVTSPL
Ga0207699_1049951423300025906Corn, Switchgrass And Miscanthus RhizosphereMNTLPPETITLLQTLVDETWNSLRPEEKLRTSRERIAARLFDKARAGERDPFRLRIAAIKGVVTSAL
Ga0207654_1105259023300025911Corn RhizosphereMNALNPETLQLLQTVLDETWESLRPEEKSRTTKAEIGRRLLERAKAGERDAFRLRLAAVRGVVTSAL
Ga0207707_1107589113300025912Corn RhizosphereSSGDRSASLDQQMNTLPPETAKLLQTLLDETWESLRPEERSRTSKKEIAARLFEKARAGEKDQFRLRVAAINGIVTSSL
Ga0207693_1021527533300025915Corn, Switchgrass And Miscanthus RhizosphereMNALTPETLEFLQTVLDETWESLRPEEKSRTTKAEIGKRLLERAKAGERDAFRLRLAAVSGVVTFAL
Ga0207660_1036255613300025917Corn RhizosphereMATLNPETLTLLQSVLDETWDSLRPEEKSRTSKEQIGARLLEKARAGEMDPFRLRIAAVSGVVTSPL
Ga0207657_1052148713300025919Corn RhizosphereDFAVSALPPETVKLLQTVLDETWESLRPEERSRTSKKQIAARLFDKARAGEGDPFRLRVAAIHGIVTFPL
Ga0207664_1053565933300025929Agricultural SoilMNALTAETLQLLQTVLDETWESLRPEEKSRTTKAEIGERLLERAKAGERDAFRLRLAAVSGVVTSAL
Ga0207701_1066821113300025930Corn, Switchgrass And Miscanthus RhizosphereFGCWSGDVVVSALPPETIKLLQSVLDETWESLRPEERSRTSKKQIAARLFDKARTGERDPFRLRIAAIHGTVTFPL
Ga0207644_1081387713300025931Switchgrass RhizosphereRKMNTLSSETIELLQTVVDETWDALRPEEKLRTSRERIAARLFDEARAGERDPLRLRIAAIEGVVTSAL
Ga0207686_1053421513300025934Miscanthus RhizosphereALTAETLQLLQTVLDETWESLRPEEKSRTTKAEIGERLLEGAKAGERDAFRLRLAAVRGVVTSAL
Ga0207686_1056008013300025934Miscanthus RhizosphereMNTLPPETITLLQTLVDETWNCLRPEEKLRTSRERIAARLFDKARAGERDPLRLRIAAIEGVVTSAL
Ga0207689_1142224913300025942Miscanthus RhizosphereKASLVIMVTLNPETLTLLQSVLDETWDSLRPEEKSRTSKEQIGARLLEKARAGEMDPFRLRIAAVSGVVTSPL
Ga0207708_1169480413300026075Corn, Switchgrass And Miscanthus RhizosphereLETLNFLQTVLDETWESLRPEERSRTSKKQIAARLFEKARAGERDPLRLRIAAIVGIVTLPL
Ga0207676_1115764333300026095Switchgrass RhizosphereMNTLPSETVKLLQTLVDETWNSLRPEEKLRTSRERIAARLFDKARAGERDPFRLRIVAIKGVVTSA
Ga0207683_1017481223300026121Miscanthus RhizosphereMNTLSSETIELLQTVVDETWDALRPEEKLRTSRERIAARLFDEARAGERDPLRLRIAAIEGVVTSAL
Ga0207522_10047213300027425SoilKMKTIPPETIKLLQTVLDETWETLRPEERSRTSKKQIATRLFDKASAGERDPFRLRIAAVDGIVKFPL
Ga0268265_1102450613300028380Switchgrass RhizosphereSALPPETIKLLQSVLDETWESLRPEERSRTSKKQIAARLFDKARTGERDPFRLRIAAIHGTVTFPL
Ga0170824_10790850323300031231Forest SoilPAAMPSGVPPGGFVGKQIKASLVCIMAALTPETLNLLQTVLDETWDSLRPDERSRTSKEQIGARILENARAGETDPFRLRIAAVSGVVTSPL
Ga0310813_1170343613300031716SoilIKASLVIMVTLNPETLTLLQSVLDETWDSLRPEEKSRTSKEQIGARLLEKARAGEMDPFRLRIAAVSGVVTSPL
Ga0307470_1156655023300032174Hardwood Forest SoilMNTLSSETIELLQTVVDEIWDALRPEEKLRTSRERIAARLFDKARAGERDPFRLRIAAIEGVVTSAL
Ga0310812_1038322623300032421SoilMVTLNPETLTLLQSVLDETWDSLRPEEKSRTSKEQIGARLLEKARAGEMDPFRLRIAA
Ga0373959_0214927_3_2273300034820Rhizosphere SoilCWSGDVVVSALPPETIKLLQSVLDETWESLRPEERSRTSKKQIAARLFDKARTGERDPFRLRIAAIHGTVTFPL


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