Metagenome / Metatranscriptome Family F086199

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086199
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	99 residues
Representative Sequence	PGQHGPLTGIHVILSNGGGDTERQHREAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTLPASQIQPQLSESFRLAGARKTNGA
Number of Associated Samples	91
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.10 %
% of genes from short scaffolds (< 2000 bps)	90.99 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.450 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.622 % of family members)
Environment Ontology (ENVO)	Unclassified (32.432 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.054 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.48% β-sheet: 22.48% Coil/Unstructured: 55.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00296	Bac_luciferase	3.60
PF00196	GerE	3.60
PF13602	ADH_zinc_N_2	2.70
PF12697	Abhydrolase_6	2.70
PF00561	Abhydrolase_1	1.80
PF13683	rve_3	1.80
PF01243	Putative_PNPOx	1.80
PF07859	Abhydrolase_3	1.80
PF13191	AAA_16	1.80
PF00072	Response_reg	1.80
PF16697	Yop-YscD_cpl	0.90
PF12680	SnoaL_2	0.90
PF03167	UDG	0.90
PF01636	APH	0.90
PF02371	Transposase_20	0.90
PF14559	TPR_19	0.90
PF08450	SGL	0.90
PF13515	FUSC_2	0.90
PF02861	Clp_N	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	3.60
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	1.80
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.90
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.90
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.90
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.90
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.90
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
All Organisms	root	All Organisms	49.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
cellular organisms	root	All Organisms → cellular organisms	49.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	38.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.33 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.80 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26.13 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.80 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.90 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.90 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.50 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.60 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.70 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.80 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.90 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.60 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.70 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.80 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.80 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.90 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.60 %
Saccharothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	1.80 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.80 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	1.80 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.90 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.90 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.60 %
Streptomyces yokosukanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces yokosukanensis	2.70 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.80 %
Corallococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus	1.80 %
Saccharothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	1.80 %
Amycolatopsis jiangsuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis jiangsuensis	0.90 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.90 %
unclassified Ktedonobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.60 %
Streptomyces yokosukanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces yokosukanensis	2.70 %
Corallococcus macrosporus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus → Corallococcus macrosporus	1.80 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.80 %
Saccharothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	1.80 %
Ktedonobacter sp. 13_1_20CM_3_54_15	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_20CM_3_54_15	0.90 %
Amycolatopsis jiangsuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis jiangsuensis	0.90 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.60 %
Streptomyces yokosukanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces yokosukanensis	2.70 %
Corallococcus macrosporus DSM 14697	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus → Corallococcus macrosporus → Corallococcus macrosporus DSM 14697	1.80 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.80 %
Saccharothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	1.80 %
Ktedonobacter sp. 13_1_20CM_3_54_15	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_20CM_3_54_15	0.90 %
Amycolatopsis jiangsuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis jiangsuensis	0.90 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090003\|LJN_F7QKVOU01CUIZC	Not Available	505	Open in IMG/M
3300004479\|Ga0062595_101383763	Not Available	640	Open in IMG/M
3300005330\|Ga0070690_101096316	Not Available	631	Open in IMG/M
3300005339\|Ga0070660_101254043	Not Available	629	Open in IMG/M
3300005341\|Ga0070691_10120126	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300005434\|Ga0070709_10013681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4568	Open in IMG/M
3300005434\|Ga0070709_10054800	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus → Corallococcus macrosporus → Corallococcus macrosporus DSM 14697	2515	Open in IMG/M
3300005435\|Ga0070714_102188696	Not Available	538	Open in IMG/M
3300005436\|Ga0070713_101383160	Not Available	682	Open in IMG/M
3300005439\|Ga0070711_100279719	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300005439\|Ga0070711_100637260	Not Available	892	Open in IMG/M
3300005439\|Ga0070711_101110334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	681	Open in IMG/M
3300005458\|Ga0070681_11772957	Not Available	544	Open in IMG/M
3300005559\|Ga0066700_10980276	Not Available	557	Open in IMG/M
3300005563\|Ga0068855_101956394	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300005602\|Ga0070762_11201254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	525	Open in IMG/M
3300005614\|Ga0068856_101814439	Not Available	621	Open in IMG/M
3300005843\|Ga0068860_102198401	Not Available	573	Open in IMG/M
3300005921\|Ga0070766_11243058	Not Available	516	Open in IMG/M
3300005921\|Ga0070766_11257815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300006028\|Ga0070717_10558977	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus → Corallococcus macrosporus → Corallococcus macrosporus DSM 14697	1036	Open in IMG/M
3300006163\|Ga0070715_11099140	Not Available	500	Open in IMG/M
3300006175\|Ga0070712_100178192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1654	Open in IMG/M
3300006176\|Ga0070765_100517592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1122	Open in IMG/M
3300006755\|Ga0079222_10024173	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2492	Open in IMG/M
3300006797\|Ga0066659_11112796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis jiangsuensis	660	Open in IMG/M
3300006804\|Ga0079221_11177089	Not Available	593	Open in IMG/M
3300006804\|Ga0079221_11715155	Not Available	512	Open in IMG/M
3300006903\|Ga0075426_10896956	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300007258\|Ga0099793_10501489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces yokosukanensis	603	Open in IMG/M
3300007258\|Ga0099793_10534709	Not Available	584	Open in IMG/M
3300009011\|Ga0105251_10094058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	1375	Open in IMG/M
3300009088\|Ga0099830_11661395	Not Available	533	Open in IMG/M
3300009090\|Ga0099827_11185005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	664	Open in IMG/M
3300009101\|Ga0105247_11013877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300009143\|Ga0099792_10673185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	667	Open in IMG/M
3300009174\|Ga0105241_11136517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300009551\|Ga0105238_11364736	Not Available	736	Open in IMG/M
3300010371\|Ga0134125_12686418	Not Available	541	Open in IMG/M
3300010375\|Ga0105239_10177108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2385	Open in IMG/M
3300010396\|Ga0134126_12866788	Not Available	522	Open in IMG/M
3300010861\|Ga0126349_1161298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	711	Open in IMG/M
3300012202\|Ga0137363_10372003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1186	Open in IMG/M
3300012203\|Ga0137399_11566666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces yokosukanensis	546	Open in IMG/M
3300012212\|Ga0150985_105971481	Not Available	503	Open in IMG/M
3300012923\|Ga0137359_11574679	All Organisms → cellular organisms → Bacteria → Terrabacteria group	545	Open in IMG/M
3300012924\|Ga0137413_10182357	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1398	Open in IMG/M
3300012925\|Ga0137419_11393763	Not Available	591	Open in IMG/M
3300012944\|Ga0137410_11221255	Not Available	648	Open in IMG/M
3300012957\|Ga0164303_11462069	Not Available	514	Open in IMG/M
3300013105\|Ga0157369_11651418	Not Available	651	Open in IMG/M
3300013307\|Ga0157372_10364651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1683	Open in IMG/M
3300014968\|Ga0157379_11840355	Not Available	595	Open in IMG/M
3300014968\|Ga0157379_12535913	Not Available	513	Open in IMG/M
3300014969\|Ga0157376_10125548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2282	Open in IMG/M
3300015242\|Ga0137412_10282313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1306	Open in IMG/M
3300015242\|Ga0137412_10674348	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300021168\|Ga0210406_10542374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	915	Open in IMG/M
3300021171\|Ga0210405_11180761	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300021178\|Ga0210408_10051845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3208	Open in IMG/M
3300021178\|Ga0210408_10602807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	870	Open in IMG/M
3300021180\|Ga0210396_10651382	Not Available	913	Open in IMG/M
3300021180\|Ga0210396_10824043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	795	Open in IMG/M
3300021181\|Ga0210388_11148682	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300021403\|Ga0210397_11574544	Not Available	510	Open in IMG/M
3300021404\|Ga0210389_10433186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1034	Open in IMG/M
3300021405\|Ga0210387_10150787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1988	Open in IMG/M
3300021405\|Ga0210387_11220205	Not Available	652	Open in IMG/M
3300021406\|Ga0210386_10542907	Not Available	1005	Open in IMG/M
3300021406\|Ga0210386_11823659	Not Available	500	Open in IMG/M
3300021407\|Ga0210383_11486484	Not Available	561	Open in IMG/M
3300021432\|Ga0210384_11732051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300021478\|Ga0210402_10977088	Not Available	773	Open in IMG/M
3300021478\|Ga0210402_11705926	Not Available	556	Open in IMG/M
3300021479\|Ga0210410_11706194	Not Available	524	Open in IMG/M
3300021559\|Ga0210409_10102595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2638	Open in IMG/M
3300021559\|Ga0210409_10109671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2541	Open in IMG/M
3300021559\|Ga0210409_10538842	Not Available	1033	Open in IMG/M
3300025905\|Ga0207685_10376366	Not Available	722	Open in IMG/M
3300025910\|Ga0207684_11648224	Not Available	518	Open in IMG/M
3300025912\|Ga0207707_11576787	Not Available	518	Open in IMG/M
3300025915\|Ga0207693_10175405	All Organisms → cellular organisms → Bacteria	1687	Open in IMG/M
3300025915\|Ga0207693_10246741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1401	Open in IMG/M
3300025924\|Ga0207694_11029142	Not Available	697	Open in IMG/M
3300025924\|Ga0207694_11096663	Not Available	674	Open in IMG/M
3300025928\|Ga0207700_10128200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2067	Open in IMG/M
3300025929\|Ga0207664_11472415	Not Available	602	Open in IMG/M
3300025931\|Ga0207644_10601144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	913	Open in IMG/M
3300025949\|Ga0207667_11867854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300025949\|Ga0207667_12181393	Not Available	511	Open in IMG/M
3300026041\|Ga0207639_11570315	Not Available	617	Open in IMG/M
3300026067\|Ga0207678_11826671	Not Available	532	Open in IMG/M
3300026295\|Ga0209234_1163947	Not Available	778	Open in IMG/M
3300026309\|Ga0209055_1173598	All Organisms → cellular organisms → Bacteria → Terrabacteria group	675	Open in IMG/M
3300026360\|Ga0257173_1044774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces yokosukanensis	617	Open in IMG/M
3300026489\|Ga0257160_1078090	Not Available	589	Open in IMG/M
3300027884\|Ga0209275_10437487	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300028381\|Ga0268264_12159996	Not Available	565	Open in IMG/M
3300028536\|Ga0137415_11008810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_20CM_3_54_15	644	Open in IMG/M
3300028906\|Ga0308309_11019081	Not Available	717	Open in IMG/M
3300029636\|Ga0222749_10494412	Not Available	661	Open in IMG/M
3300031199\|Ga0307495_10085811	Not Available	720	Open in IMG/M
3300031231\|Ga0170824_101188048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1027	Open in IMG/M
3300031231\|Ga0170824_103325293	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300031718\|Ga0307474_10580331	Not Available	883	Open in IMG/M
3300031718\|Ga0307474_10668785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	820	Open in IMG/M
3300031823\|Ga0307478_10569209	Not Available	947	Open in IMG/M
3300032174\|Ga0307470_10946515	Not Available	681	Open in IMG/M
3300032180\|Ga0307471_100354177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1579	Open in IMG/M
3300032205\|Ga0307472_100270863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1345	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.48%
Host-Associated	Host-Associated	22.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.48%
Plants	Host-Associated → Plants	22.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.11%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.15%
Loam	Environmental → Terrestrial → Soil → Loam	24.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.80%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.41%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.51%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.41%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.41%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.90%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090003	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJN_01887030	2088090003	Quercus Rhizosphere	YALVGSQHRPGQHGPLTGIHVILSNGAGDTERQHREAQILQTGLFYSAARFRIIEGSPNPAEWLEVFETGDPDPLHAYPRAAGHTFPAPQIHLQLSQSFRLAGAPRAAAHVPEGRLAGR
Ga0062595_1013837632	3300004479	Soil	PGPHGPLTGIHVILSNGGGDTERQHQETQILQTGLFYSAARFRLIEGSPEPAEWLQVFETDDPDPLHTYLRATSHTPPAPQIQPQLSESFRLAGARKTNGA*
Ga0070690_1010963161	3300005330	Switchgrass Rhizosphere	GGDDTERQRQEAQILQTGLFYSTARFRIIEGSPEPAEWLEIFETDDPDPLHAYPRAASHTPPAPQIKPQLSQSFRLADTRKNQ*
Ga0070660_1012540432	3300005339	Corn Rhizosphere	GSQLQPGQHGPLTGIHVILSNDASDAERQHRGAQILQTGLFYSAARFRLIEGSPDPAEWLEVFETDDPDPLHTYLRATSHTPPAPQIQPQLSESFRLAGARKTNGA*
Ga0070691_101201262	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	GPLTGIHVILSNGAGDTERQHREAQILQTGLFYSAARFRLIEGSPNPAEWLEVFETGDPDPLHAYPQAAGHTLPAPQIHSQLSQSFRLAGAPRAAAHVPGGRLAGR*
Ga0070709_100136811	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	NGGGDTERQHWEAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTPPAPQIQPQLSESFRLAGARKTNGA*
Ga0070709_100548004	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	NGGGDTERQHWEAQILQTGLFYSAARFRIIEGSPEPAEWLQVFETDDPDPLHTYLRATSHTLPASQIQPQLSESFRLAGARKTNGA*
Ga0070714_1021886961	3300005435	Agricultural Soil	GPHGPLTGIHVILSNGGGDTERQHWEAQILQTGLFYSAARFRIIEGSPDPAGWLEVFETDDPDPLHTYLRATSHTLPASQIQPQLSESFRLAGAYKTNGA*
Ga0070713_1013831601	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	NGGGDTERQHWEAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTPPAPQIQPQLSESFRLADARKTNGA*
Ga0070711_1002797192	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	IHVILSNGGGDTERQHREAQILQTGAFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHAYPRAIRHTPPAPQIQPQLSQSFRLASARKTNRT*
Ga0070711_1006372601	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GSQLQPGQHGPLTGIHVILSNGGGDTERQHREAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRTTSHTLPASQIQPQLSESFRLAGTRKTNGA*
Ga0070711_1011103342	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	SQLRPGQHGPLTGIHVILSNSGGDTERQHREAQILQTGLFYSAARFRLIEGFPDPAGWLEVFETDHPDPLHAYPRAASQTLPAPQIRTQLSESFRLAGMLVAKDS*
Ga0070681_117729571	3300005458	Corn Rhizosphere	HGPLTGIHVILSNGGDDTERQRQEAQILQTGLFYSTARFRIIEGSPEPAEWLEIFETDDPDPLHAYPRAASHTPPAPQIKPQLSQSFRLADTRKNQ*
Ga0070685_113243361	3300005466	Switchgrass Rhizosphere	GDTERQHREAQILQTGLFYSTARFRIIEGSPEPAEWLEVFETDDPDPLHAYPRAASHTLPAPQLHPQLSQSFRLAGAPRAAAHVPGGRLAGR*
Ga0066700_109802761	3300005559	Soil	PALRASYALIGSQLQPGQHGPLTGIHVILSNGGSDTERQHWEAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTLPASQIQPQLSESFRLAGARKTNGA*
Ga0068855_1019563941	3300005563	Corn Rhizosphere	GDTERQHREAQILQTGLFYSAARFRLIEGFPDPAGWLEVFETDHPDPLHAYPRAASQTLPAPQIRTQLSESFRLAGMLVAKDS*
Ga0070762_112012541	3300005602	Soil	ALVGSQLQPGQHGPLTGIHVILSNGGDDTKRQHRETQILQTGLFYSAARFRLIEGSPDPAGWLEVFETDDPDPLHTYPRVPASQIQPQLSESFRLAGTRLPHR*
Ga0068856_1018144391	3300005614	Corn Rhizosphere	ILSNGGGDTERQHREAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTPPAPQIQPQLSESFRLAGARKTNGA*
Ga0068860_1021984011	3300005843	Switchgrass Rhizosphere	GPLTGIHVILSNGAGDTERQHRETQILQTGLFYSAARFRLIEGSPNPAEWLEVFETGDPDPLHAYPRAAGHTLPVPQIHAQLSQSFRLAGAPRAALHVPGGRLAGR*
Ga0070766_112430581	3300005921	Soil	QFQPGQHGPLTGIHVILSNGSSDTERQHREAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYPRATSHTPPASQIQPQLSESFRLAGARKTNDA*
Ga0070766_112578152	3300005921	Soil	QFQPGQHGPLTGIHVILSNGGDDTKRQHRETQILQTGLFYSAARFRLIEGSPDPAGWLEVFETDDPDPLDTYPRVPASQIQPQIERVVPPGWHPTAAPVSHR*
Ga0070717_105589771	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LVSPALRASYALIGSQLQPGPHGPLTGIHVILSNGGGDTERQHWEAQILQTGLFYSAARFRIIEGSPEPAEWLQVFETDDPDPLHTYLRATSHTLPASQIQPQLSESFRLAGARKTNGA*
Ga0070715_110991401	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LQPGQHGPLTGIHVILSNGGGDTERQHREAQILQTGLFYSAARFRLIEGSPEPAEWLEIFETDDPDPLHTYPRATSHTPPASQIQPQLSQSFRLAGARKTNGA*
Ga0070712_1001781923	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	HGPLTGIHVILSNGGGDTERQHWEAQILQTGLFYSAARFRLIEGSPEPAEWLEIFETDDPDPLHTYPRAASHTLPAAQIRPQMSESFRLAGARKTNGA*
Ga0070765_1005175923	3300006176	Soil	GGGDTERQHREAQILQTGLFYSAARFRIIEGSPGPAGWLEVFETDDPDPLHAYPRATSHTLATPQIQPQLSESFRLAGTRKTNAREPNT*
Ga0079222_100241735	3300006755	Agricultural Soil	SQLPPGQRGPLTGIHVILSNGGDDTERQHQEAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHAYARAIGHTPSESQIQPQFSQSFRLTVMRSHSVID*
Ga0066659_111127962	3300006797	Soil	SYAFVGSQARPGEHGRLTGIHVVLSNGGDDTGRRHREAEVLRTGLFYSASRFRLIEGFPEPAEWLEVFETDARDPLDTYARAINPMPSAASELQPGLSRSFRLAHAHGASPGIG*
Ga0079221_111770891	3300006804	Agricultural Soil	HGPLTGIHVILSNGGGDTDRQHRETQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDSDRFHVYARATSHTPPASPIQPQLSQSFRLQNQRRVS*
Ga0079221_117151551	3300006804	Agricultural Soil	SPALRASYALIGSQLQPGPHGPLTGIHVILSNGGGDTERQHQEAQILQTGLFYSAARFRIIEGSPEPAEWLQVFETDDPDPLHTYLRATSHTPPAPQIQPQLSESFRLAGTRKTNGA*
Ga0075426_108969562	3300006903	Populus Rhizosphere	HREAQILQTGLFYSAARFRLIEGSPDPAEWLEVFETDDPDPLHAYQRATTQTLPAPQIHPRLSESFRLAGAAAHVSGPESR*
Ga0099793_105014892	3300007258	Vadose Zone Soil	VGSLARPGDHGWLTGIHVVLSNGGDDTGRQQREAEVLRTGLFYSAARFRIIEGFPEPAEWLQVFETDARDPLDTYARATSPVPSSASELQPELSRSFRLAHAHRASRGVG*
Ga0099793_105347091	3300007258	Vadose Zone Soil	PALRASYALVGSQLQLGQHGPLTGIHVILSNGGGDTERQHREAQILQTGLFYSAARFRIIEGSPDPAEWLEIFETDHPDPLHAYPRATSNTPPAPQIQPRLSQSFHLAGTPQNQSRVS*
Ga0105251_100940581	3300009011	Switchgrass Rhizosphere	PGQHGPLTGIHVILSNGGGDTERQHREAQILQTGLFYSAARFRLIEGSPNPAEWLEVFETGDPDPLHAYPQAAGHTLPAPQIHSQLSQSFRLAGAPRAAAHVPGGRLAGR*
Ga0099830_116613951	3300009088	Vadose Zone Soil	GRQQTEAQVLQTGPFYSAARFRIIEGFPEPAEWLEVFETDVGDPLNAYARATSHSPSSSAIKTELSESFRLAGTRKTAPA*
Ga0099827_111850051	3300009090	Vadose Zone Soil	TERQHREAQILQTGLFYSAARFRIIEGSPDPAGWLEVFETDDPDPLHAYPRAASQTRPPPQIRPQLSESFRLAGMLVAKDS*
Ga0105247_110138771	3300009101	Switchgrass Rhizosphere	ERQHREAQILQTGSFYSASRFRIIEGFPEPAEWLEIFETDDPDPLHAYPRVTSHTLPASQIQPQLTESFRLAAARTTSGA*
Ga0099792_106731851	3300009143	Vadose Zone Soil	PSPHGPLTGIHVILSNSGGDTERQHWEAQILHTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHAYPRAASQTLPAPQIRPQLSESFRLAGMLVAKDS*
Ga0105241_111365171	3300009174	Corn Rhizosphere	LVGSQLQPGPHGPLTGIHVILSNGGSDTERQHREAQILQTGSFYSASRFRIIEGFPEPAEWLEIFETDDPDPLHAYPRVTSHTLPASQIQPQLTESFRLAAARTTSGA*
Ga0105238_113647361	3300009551	Corn Rhizosphere	PALRASYALVGSQHRPGQHGPLTGIHVILSNDASDAERQHRGAQILQTGLFYSTARFRIIEGSPEPAEWLEIFETDDPDPLHAYPRAASHTPPAPQIKPQLSQSFRLADTRKNQ*
Ga0134125_126864181	3300010371	Terrestrial Soil	GGDTERQHREAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTPPAPQIQTQLSESFRLAGARKTNGA*
Ga0105239_101771081	3300010375	Corn Rhizosphere	DTERQRQEAQILQTGLFYSTARFRIIEGSPEPAEWLEIFETDDPDPLHAYPRAASHTPPAPQIKPQLSQSFRLADTRKNQ*
Ga0134126_128667881	3300010396	Terrestrial Soil	YALVGSQLQPGPHGPLTGIHVILSNGGGDTERQHWEAQILQTGLFYSAARFRIIEGSPEPAEWLQVFETDDPDPLHTYLRATSHTLPASQIQPQLSESFRLAGARKTNGA*
Ga0126349_11612982	3300010861	Boreal Forest Soil	DDTERQHREAQILQTGLFYSAARFRIIEGSPDPAGWLEIFETDHPDPLHAYPRAASHTPPASQIQPQLSQSFRLAGTPKTNGA*
Ga0137363_103720031	3300012202	Vadose Zone Soil	EHGRLTGVHIILSNGGADTGRQRQEAGVLQTGLFYSAARFRIIEGFPEPAEWLQVFETDARDPLDTYARATSPVPSSASELQPELSRSFRLAHAHRASRGVG*
Ga0137399_115666662	3300012203	Vadose Zone Soil	RPGEHGRLTGIHIILSNGGDDTGRQRQEAGVLQTGLFYSAARFRIIEGFPEPAEWLQVFETDARDPLDTYARATSPVPSSASELQPELSRSFRLAHAHRASRGVG*
Ga0150985_1059714811	3300012212	Avena Fatua Rhizosphere	ERQHREAQILQTGLFHSAARFRIIEGSPEPAGWLEVFESDDPDPLHAYRRAASHTPPAPQIQPQLSQSFRLAGTRKTNGG*
Ga0137359_115746792	3300012923	Vadose Zone Soil	RPGDHGWLTGIHVVLSNGGDDTGRQQREAEVLRTGLFYSASRFRIIEGSPEPAEWLEVFETDARDPLGTYARAISPMPPAASELQPELSRSFRLAHAHGASPGIG*
Ga0137413_101823573	3300012924	Vadose Zone Soil	GQHGPLTGIHVILSNGGDDTERQQREEQVLQTGLFYSAARFRIIEGFPAPAEWLEVFETDDPDPLHAYPRSTSHAPPASQIQPQLSQSFRLAARR*
Ga0137419_113937631	3300012925	Vadose Zone Soil	QQHEDQVLQTGRFYSASRFRIIEGFPEPAEWLEVFETDAPDPLDTYAGTPSATPPAAEIQPQLSQSFRLPGSPKTHMA*
Ga0137410_112212551	3300012944	Vadose Zone Soil	IGSQLQPGPHGPLTGIHVILSNGGGDTERQHREAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTLPASQIQPQLSESFRLAGARKTNCA*
Ga0164303_114620691	3300012957	Soil	GPHGPLTGIHVILSNGGGDTERQHQETQILQTGLFYSAARFRIIEGSPEPAEWLQVFETDDPDPLHTYPRAASHTLPAPQIHSQLSQSFRLAGAPRAAGFSSPSVTASRAAAM*
Ga0157369_116514181	3300013105	Corn Rhizosphere	RASYALIGSQLQPGPHGPLTGIHVILSSCGGDTERQHQETQILQTGLFYSAARFRIIEGSPEPAEWLQVFETDDPDPLHTYLRATSHTPPAPQIQPQLSESFRLAGARKTNGA*
Ga0157372_103646513	3300013307	Corn Rhizosphere	PLTGIHVILSNGAGDTERQHRETQILQTGLFYSAARFRLIEGSPNPAEWLEVFETGDPDPLHAYPRAAGHTLPVPQIHAQLSQSFRLAGAPRAALHVPGGRLAGR*
Ga0157379_118403551	3300014968	Switchgrass Rhizosphere	GPLTGIHVILSNGAGDTERQHRETQILQTGLFYSAARFRLIEGSPNPAKWLEVFETGDPDPLHAYPRAAGHTLPVPQIHAQLSQSFRLAGAPRAALHVPGGRLAGR*
Ga0157379_125359131	3300014968	Switchgrass Rhizosphere	HGPLTGIHVILSNGGGDTERQHQETQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTPPAPQIQPQLSESFRLAGARKTNGA*
Ga0157376_101255481	3300014969	Miscanthus Rhizosphere	LRASYALVGSQLQPGEHGPLTGIHVILSNGGDDTERQRQEAQILQTGLFYSTARFRIIEGSPEPAEWLEIFETDDPDPLHAYPRAASHTPPAPQIKPQLSQSFRLADTRKKQ*
Ga0137412_102823133	3300015242	Vadose Zone Soil	LVSPALRCSYALVGSQLQPGEHGPLTGIHVILSNGGGDTERQHREAQILQSGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTLPASQIQPQLSESFRLAGARKTNCA*
Ga0137412_106743482	3300015242	Vadose Zone Soil	ASYALVGSQLHLGQHGPLTGIHVILSNGGDDTERQQREEQVLQTGLFYSAARFRIIEGSPAPAEWLEVFETDDPDPLHAYPRSTSHAPPASQIQPQLSQSFRLAGTRKTKGA*
Ga0210406_105423742	3300021168	Soil	LVSPALRASYALVGSQLQPGQHGPLTGIHVILSNGGSDTERQHREAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDRPDPLHAYPRAASHTLPASQIQPQLSQSFRLAGHPQNQTGF
Ga0210405_111807611	3300021171	Soil	PLTGIHVILSNGGSDTERQHREAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDRPDPLHAYPRAASHTLPASQIQPQLSQSFRLAGHPQNQTGF
Ga0210408_100518455	3300021178	Soil	GQHGPLTGIHVILSNGSGDTERQHREAQILQTGLFYSAARFLIIEGSPAPTEWLEIFETDNPDPLHAYPRATRHTPPAPQIQPQLSQSFRLADARKNQSRVS
Ga0210408_106028072	3300021178	Soil	GPLTGIHVILSNGGGDTERQHREAQILQTGLFYSAARFRIIEGSPGPAGWLEVFETDDPDPLHAYPRATSHTLAASQIQPQLSESFRWLAPAKPMAREPNM
Ga0210396_106513821	3300021180	Soil	GGGDTERQHREAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYPRATRHTVPASQIQPQLSESFRLAGARKTNDA
Ga0210396_108240431	3300021180	Soil	HVILSNGGSDTERQHREAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDRPDPLHAYPRAASHTLPASQIQPQLSQSFRLAGHPQNQTGF
Ga0210388_111486822	3300021181	Soil	SGGGDDTERQQREAQILHTGLFYSAARFRLIEGSPEPAEWLEVFETDDPDPLHAYPRADSHTLAAPQIQPQLSESFRLASAGRGQRTGPGGSRDAADA
Ga0210397_115745441	3300021403	Soil	GIYVILSNGGDDTERQQREAQILQTRLFYSAARFRLIEGSPEPAEWLEVLETDDPDPLHAYARATGHTPSESQIQPQLSQSFRLTDARENNGA
Ga0210389_104331861	3300021404	Soil	IHVILSNGGGDTERQHREAQILQTGLFYSAARFRIIEGSPGPAGWLEVFETDDPDPLHAYPRATSHTLAAPQIQPQLSESFRWLAPAKPMAREPNT
Ga0210387_101507873	3300021405	Soil	GDTERQHREAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYPRATRHTVPASQIQPQLSESFRLAGARKTNDA
Ga0210387_112202051	3300021405	Soil	SYALVGSQLQPGQHGPLTGIHVILSNGGGDTERQHREAQILQTGLFYSAARFRIIEGSPGPAGWLEVFETDDPDPLHAYPRATSHTLAAPQIQPQLSESFRLAGTAKPMAREPNT
Ga0210386_105429072	3300021406	Soil	DTERQHREAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRAPSHTLPASQIQPQLSQSFRLAGHPQNQTGF
Ga0210386_118236592	3300021406	Soil	GRPGPLTGVHVILSNGGDDTERQRREAQILRTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLRAYLRATSQTPPAAKIQLQLSESFRLAGARG
Ga0210383_114864841	3300021407	Soil	QHRETQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATRHTPPAPQIQPQLSESFRLAGARKTNPA
Ga0210384_117320512	3300021432	Soil	QHREAQILQTGLFYSATRFRIIEGSPDPAEWLEIFETDHLDPLHTYPRATSGTLPAPQIQSQLSESFRLAGGRKANSA
Ga0210402_109770882	3300021478	Soil	SALVGSQLQPGPHGPLTGIHVILSNGGGDTERQHREAQILHTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTLPASQIQPQLSESFRLAGARKTNGA
Ga0210402_117059261	3300021478	Soil	NGGGDTERQHREAQILQTGLFYSAARFRIIEGSPEPARWLEVFETDHPDPLHAYPQATSHTPPASQIQPQLSRSFRLAVARKTTGA
Ga0210410_117061942	3300021479	Soil	VGSQLQPGQHGPLTGIHVVLSNGGGDTERQHQEAQILQTGLFYSAARFRLIEGSPTPPEWLEVFETDDPDPLHAYPRATSHTLAAPQIQPQLSESFRWLAPAKPMAREPNT
Ga0210409_101025951	3300021559	Soil	LRASYALVGSQLQPGQHGPLTGIHVILSNGSGDTERQHREAQILQTGLFYSAARFRLIEGSPDPAEWLEVFETDNPDPLHAYPRATRHTPPAPQIQPQLSQSFRLADARKNQSRVS
Ga0210409_101096713	3300021559	Soil	SPALRSSYALVGSQLRPGPHGPLTGIHVILSNGGGDTERQHWEAQILQTGLFYSAARFRIIEGSPDPAGWLEVFETDDPDPLHTYLRATSHTLPASQIQPQLSESFRLAGAYKTNGA
Ga0210409_105388423	3300021559	Soil	VILSSGGGDTERQHREAQILHTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATRHTPPAPQIQPQLSESFRLAGARKTNPA
Ga0207685_103763661	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	GGGDTERQHWEAQILQTGLFYSAARFRIIEGSPEPAEWLQVFETDDPDPLHTYLRATSHTLPASQIQPQLSESFRLAGARKTNGA
Ga0207684_116482241	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	QLQPGEHGPLTGIHVILSNGGDDTERQRQEAQILQTGLFYSTARFRIIEGSPEPAEWLEIFETDDPDPLHAYPRAASHTPPAPQIKPQLSQSFRLADTRKNQ
Ga0207707_115767871	3300025912	Corn Rhizosphere	ALRASYALVGSQLQPGEHGPLTGIHVILSNGGDDTERQRQEAQILQTGLFYSTARFRIIEGSPEPAEWLEIFETDDPDPLHAYPRAASHTPPAPQIKPQLSQSFRLADTRKNQ
Ga0207693_101754054	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	IHVILSNGGGDTERQHREAQILQTGLFYSAARFRIIEGSPEPAAWLEVFETDDPDPLHVYPRATGHTLPAPQIQPQLSQSFRLAGARNTNGA
Ga0207693_102467413	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	HVILSNGGGDTERQHWEAQILQTGLFYSAARFRLIEGSPEPAEWLEIFETDDPDPLHTYPRAASHTLPAAQIRPQMSESFRLAGARKTNGA
Ga0207694_110291421	3300025924	Corn Rhizosphere	TERQRQEAQILQTGLFYSTARFRIIEGSPEPAEWLEIFETDDPDPLHAYPRAASHTPPAPQIKPQLSQSFRLADTRKNQ
Ga0207694_110966631	3300025924	Corn Rhizosphere	YALIGSQLQPGPHGPLTGIHVILSSGGGDTERQHQETQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTPPAPQIQPQLSESFRLAGARKTNGA
Ga0207700_101282001	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	ALVDSQLRPGQHGPLTGIHVILSNSGGDTERQHREAQILQTGLFYSAARFRLIEGFPDPAGWLEVFETDHPDPLHAYPRAASQTLPAPQIRTQLSESFRLAGMLVAKDS
Ga0207664_114724152	3300025929	Agricultural Soil	GGDTERQHQETQILQTGLFYSAARFRIIEGSPEPAEWLQVFETDDPDPLHTYLRATSHTPPAPQIQTQLSESFRLAGARKTNGA
Ga0207644_106011442	3300025931	Switchgrass Rhizosphere	HRPGQHGPLTGIHVILSNGTGDTERQHREAQILQTGLFYSAARFRLIEGSPNPAEWLEVFETGDPDPLHAYPRAAGRILPAPQIHAQLSQSFRLAASRAAAPVPGGRLAGR
Ga0207667_118678542	3300025949	Corn Rhizosphere	TGIHVILSNSGGDTERQHREAQILQTGLFYSAARFRLIEGFPDPAGWLEVFETDHPDPLHAYPRAASQTLPAPQIRTQLSESFRLAGMLVAKDS
Ga0207667_121813932	3300025949	Corn Rhizosphere	PGQHGPLTGIHVILSNGAGDTERQHREAQILQTGLFYSAARFRLIEGSPNPAEWLEVFETGDPDPLHAYPRAASHTLPAPQIHSQLSQSFRLAGAPVPRDSRRRASPPVGPLPM
Ga0207639_115703152	3300026041	Corn Rhizosphere	SQLQPGPHGPLTGIHVILSNGGGDTERQHQETQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTPPAPQIQPQLSESFRLAGARKTNGA
Ga0207678_118266711	3300026067	Corn Rhizosphere	VGSQHRPGQDGPLTGIHVILSNGAGDTERQHRETQILQTGLFYSAARFRLIEGSPNPAEWLEVFETGDPDPLHAYPRAAGHTLPVPQIHAQLSQSFRLAGAPRAALHVPGGRLAGR
Ga0209234_11639471	3300026295	Grasslands Soil	VILSNSGGDTERQHWEAQILHTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTLPASQIQPQLSESFRLAGARKTNGA
Ga0209055_11735981	3300026309	Soil	TERQHWEAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTLPASQIQPQLSESFRLAGARKTNRA
Ga0257173_10447742	3300026360	Soil	RAKLVAPALRASYALVGSQARPGEHGRLTGIHIILSNGGDDTGRQRQEAGVLQTGLFYSAARFRIIEGFPEPAEWLQVFETDARDPLDTYARATSPVPSSASELQPELSRSFRLAHAHRASRGVG
Ga0257160_10780901	3300026489	Soil	RQHWEAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTLPASQIQPQLSESFRLAGARKTNGA
Ga0209275_104374872	3300027884	Soil	HVILSGGGGDTERQQREAQILHTGLFYSAARFRLIEGSPEPAEWLEVFETDDPDPLHAYPRADSHTLAAPQIQPQLSESFRLASAGRGQRTGPGGSRDAADA
Ga0268264_121599961	3300028381	Switchgrass Rhizosphere	SQLQPCPHGPLTGIHVILSNGGGDTERQHQETQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTPPAPQIQPQLSESFRLAGARKTNGA
Ga0137415_110088101	3300028536	Vadose Zone Soil	IVGSLARPGDHGWLTGIHVVLSNGGDDTGRQQREAEVLRTGLFYSASRFRIIEGSPEPAEWPEVFETDARDPLGTYARAISPMPPAASELQPELSRSFRLAHAHRASRGVG
Ga0308309_110190811	3300028906	Soil	ALVGSRLQPGQHGPLTGIHVILSNGGDDTERQHREAQILQTGLFYSAARFRIIEGSPEPAGWLEVFETDDPDPLHAYPRATSHTPPASQVQPRLSESFRLAGMRKTSGA
Ga0222749_104944121	3300029636	Soil	PGQHGPLTGIHVILSNGGGDTERQHREAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTLPASQIQPQLSESFRLAGARKTNGA
Ga0307495_100858112	3300031199	Soil	TERQHWEAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYLRATSHTLPASQIEPQLSESFRLAGACKTNGA
Ga0170824_1011880482	3300031231	Forest Soil	DTERQHQEAQILQTGLFYSAARFRLIEGSPDPAGWLEIFETDHPDPIHAYPRAASHTPPAPQIHPQLSQSFRLAGTPATNRA
Ga0170824_1033252931	3300031231	Forest Soil	RASYALVGSQIRPGEHGGLTGIHIILSNGGDDTGRQRREAEVLQTGLFYSAARFRIIEGSPEPAEWLEVFETDARDPLDRYARATSPVPSYASELQPELSRSFRLAHSHRASRGVG
Ga0307474_105803311	3300031718	Hardwood Forest Soil	GGGDTERQQREAQILRTGLFYSAARFRLIEGSPEPAEWLEVFETDDPDPLHAYPRADSHPLGAPQIQPQLSQSFRLASAGRGQRTGRGGSRDAADA
Ga0307474_106687852	3300031718	Hardwood Forest Soil	LTGIHVILSNGGSDTERQHREAQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDRPDPLHAYPRAASHTLPASQIQPQLSQSFRLAGHPQNQTGF
Ga0307478_105692091	3300031823	Hardwood Forest Soil	PLTGIHVILSNGGGDTERQHQETQILQTGLFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHTYPRATSHTPPAPQIQPQLSESFRLAGTRKTNGA
Ga0307470_109465152	3300032174	Hardwood Forest Soil	ILSNGGGDTERQHREAQILQTGAFYSAARFRIIEGSPEPAEWLEVFETDDPDPLHVYPRATSHTLPAPQIQPQLSQSFRLADTRKTNDA
Ga0307471_1003541771	3300032180	Hardwood Forest Soil	HGPLTGIHVILSNSGGDTERQHREAQILQTGLFYSAARFRLIEGFPDPAGWLEVFETDHPDPLHAYPRAASQTLPAPQIRTQLSESFRLAGMLVAKDS
Ga0307472_1002708631	3300032205	Hardwood Forest Soil	IHVILSNGGGDTERQHREAQILQTGLFYSAARFRIIEGSPDPAGWLEVFETDDPDPLHTYLRATSHTLPASQIQPQLSESFRLAGAYKTNGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086199

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences