Metagenome / Metatranscriptome Family F085858

Overview

Basic Information

• Family ID: F085858
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 111
• Average Sequence Length: 72 residues
• Representative Sequence: MDMKEFKEVVKLKIIPTTFVFRCTLCGFEMTNYDRHFGLIKMNEHIISNHSTEVNSLGKEDLYSRKPEIVLDRF
• Number of Associated Samples: 79
• Number of Associated Scaffolds: 111

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 76.58 %
• % of genes near scaffold ends (potentially truncated): 27.03 %
• % of genes from short scaffolds (< 2000 bps): 81.08 %
• Associated GOLD sequencing projects: 70
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (56.757 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen (7.207 % of family members)
• Environment Ontology (ENVO): Unclassified (30.631 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (30.631 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 23.53%
  β-sheet: 21.57%
  Coil/Unstructured: 54.90%

Predicted 3D Structure

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.55.1.0: automated matches	d2w40a1	2w40	0.59022
c.55.7.1: Methylated DNA-protein cysteine methyltransferase domain	d1mgta2	1mgt	0.58156
c.55.4.1: Ribosomal protein L18 and S11	d1vq8n1	1vq8	0.5775
d.304.1.1: TTHA1013-like	d1wv8a1	1wv8	0.57744
c.55.4.1: Ribosomal protein L18 and S11	d1fjgk_	1fjg	0.5679

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01713	Smr	2.70
PF16901	DAO_C	2.70
PF03950	tRNA-synt_1c_C	2.70
PF00481	PP2C	1.80
PF13247	Fer4_11	1.80
PF00890	FAD_binding_2	1.80
PF00701	DHDPS	1.80
PF01370	Epimerase	1.80
PF00291	PALP	0.90
PF00528	BPD_transp_1	0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	3.60
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	2.70
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.80
COG0631	Serine/threonine protein phosphatase PrpC	Signal transduction mechanisms [T]	1.80
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	1.80
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.90
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	0.90
COG1410	Methionine synthase I, cobalamin-binding domain	Amino acid transport and metabolism [E]	0.90
COG1775	Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB	Amino acid transport and metabolism [E]	0.90
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.90

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.66 %
Unclassified	root	N/A	42.34 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.66 %
Unclassified	root	N/A	42.34 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.76 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.90 %
Unclassified	root	N/A	42.34 %

Level 4

Name	Rank	Taxonomy	Distribution
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	29.73 %
Unclassified	root	N/A	42.34 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.80 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
bacterium ADurb.Bin212	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin212	1.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	27.93 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.80 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.90 %
Unclassified	root	N/A	42.34 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
bacterium ADurb.Bin212	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin212	1.80 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	12.61 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.80 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Unclassified	root	N/A	42.34 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.90 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.90 %

Level 7

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
bacterium ADurb.Bin212	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin212	1.80 %
Betaproteobacteria bacterium RBG_16_64_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	0.90 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.90 %
Chloroflexi bacterium RBG_16_60_22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_60_22	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Unclassified	root	N/A	42.34 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	3.60 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.90 %

Level 8

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
bacterium ADurb.Bin212	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin212	1.80 %
Betaproteobacteria bacterium RBG_16_64_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	0.90 %
Chloroflexi bacterium RBG_16_60_22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_60_22	0.90 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3.60 %
Deltaproteobacteria bacterium RBG_13_43_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_43_22	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.90 %
Unclassified	root	N/A	42.34 %

Level 9

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
bacterium ADurb.Bin212	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin212	1.80 %
Betaproteobacteria bacterium RBG_16_64_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	0.90 %
Chloroflexi bacterium RBG_16_60_22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_60_22	0.90 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3.60 %
Deltaproteobacteria bacterium RBG_13_43_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_43_22	0.90 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Unclassified	root	N/A	42.34 %

Level 10

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
bacterium ADurb.Bin212	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin212	1.80 %
Betaproteobacteria bacterium RBG_16_64_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	0.90 %
Chloroflexi bacterium RBG_16_60_22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_60_22	0.90 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3.60 %
Deltaproteobacteria bacterium RBG_13_43_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_43_22	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	0.90 %
Unclassified	root	N/A	42.34 %

Level 11

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
bacterium ADurb.Bin212	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin212	1.80 %
Betaproteobacteria bacterium RBG_16_64_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	0.90 %
Chloroflexi bacterium RBG_16_60_22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_60_22	0.90 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	0.90 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3.60 %
Deltaproteobacteria bacterium RBG_13_43_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_43_22	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Unclassified	root	N/A	42.34 %

Level 12

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
bacterium ADurb.Bin212	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin212	1.80 %
Betaproteobacteria bacterium RBG_16_64_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	0.90 %
Chloroflexi bacterium RBG_16_60_22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_60_22	0.90 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3.60 %
Deltaproteobacteria bacterium RBG_13_43_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_43_22	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	0.90 %
Unclassified	root	N/A	42.34 %

Level 13

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
bacterium ADurb.Bin212	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin212	1.80 %
Betaproteobacteria bacterium RBG_16_64_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	0.90 %
Chloroflexi bacterium RBG_16_60_22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_60_22	0.90 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3.60 %
Deltaproteobacteria bacterium RBG_13_43_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_43_22	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Tylenchina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina	0.90 %
Unclassified	root	N/A	42.34 %

Level 14

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
bacterium ADurb.Bin212	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin212	1.80 %
Betaproteobacteria bacterium RBG_16_64_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	0.90 %
Chloroflexi bacterium RBG_16_60_22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_60_22	0.90 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3.60 %
Deltaproteobacteria bacterium RBG_13_43_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_43_22	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Panagrolaimomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha	0.90 %
Unclassified	root	N/A	42.34 %

Level 15

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
bacterium ADurb.Bin212	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin212	1.80 %
Betaproteobacteria bacterium RBG_16_64_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	0.90 %
Chloroflexi bacterium RBG_16_60_22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_60_22	0.90 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3.60 %
Deltaproteobacteria bacterium RBG_13_43_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_43_22	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Strongyloidoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea	0.90 %
Unclassified	root	N/A	42.34 %

Level 16

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
bacterium ADurb.Bin212	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin212	1.80 %
Betaproteobacteria bacterium RBG_16_64_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	0.90 %
Chloroflexi bacterium RBG_16_60_22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_60_22	0.90 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3.60 %
Deltaproteobacteria bacterium RBG_13_43_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_43_22	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Strongyloididae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae	0.90 %
Unclassified	root	N/A	42.34 %

Level 17

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
bacterium ADurb.Bin212	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin212	1.80 %
Betaproteobacteria bacterium RBG_16_64_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	0.90 %
Chloroflexi bacterium RBG_16_60_22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_60_22	0.90 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3.60 %
Deltaproteobacteria bacterium RBG_13_43_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_43_22	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Parastrongyloides	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides	0.90 %
Unclassified	root	N/A	42.34 %

Level 18

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
bacterium ADurb.Bin212	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin212	1.80 %
Betaproteobacteria bacterium RBG_16_64_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	0.90 %
Chloroflexi bacterium RBG_16_60_22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_60_22	0.90 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3.60 %
Deltaproteobacteria bacterium RBG_13_43_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_43_22	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.90 %
Unclassified	root	N/A	42.34 %

Associated Scaffolds

Scaffold	Taxonomy	Length
(restricted) 3300013137|Ga0172375_10000100	All Organisms → cellular organisms → Bacteria	124423
(restricted) 3300027856|Ga0255054_10174783	Not Available	1057
(restricted) 3300027868|Ga0255053_10380820	Not Available	682
2124908004|PBDC3_contig38816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	507
3300000032|Draft_c0022357	Not Available	987
3300001213|JGIcombinedJ13530_103368515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4531
3300001213|JGIcombinedJ13530_103634311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	2370
3300001213|JGIcombinedJ13530_105732858	Not Available	910
3300001213|JGIcombinedJ13530_106824854	All Organisms → cellular organisms → Bacteria	1114
3300002053|SMTZ23_10003449	All Organisms → cellular organisms → Bacteria	29614

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Engineered	Engineered	20.72%
Environmental	Environmental	79.28%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	68.47%
Bioreactor	Engineered → Bioreactor	8.11%
Lab Enrichment	Engineered → Lab Enrichment	5.41%
Solid Waste	Engineered → Solid Waste	4.50%
Terrestrial	Environmental → Terrestrial	10.81%
Wastewater	Engineered → Wastewater	2.70%

Category

Habitat	Taxonomy	Distribution
Anaerobic	Engineered → Bioreactor → Anaerobic	8.11%
Defined Media	Engineered → Lab Enrichment → Defined Media	5.41%
Freshwater	Environmental → Aquatic → Freshwater	34.23%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	2.70%
Landfill	Engineered → Solid Waste → Landfill	2.70%
Marine	Environmental → Aquatic → Marine	27.93%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.90%
Peat	Environmental → Terrestrial → Peat	0.90%
Sediment	Environmental → Aquatic → Sediment	5.41%
Soil	Environmental → Terrestrial → Soil	9.91%
Wood	Engineered → Solid Waste → Wood	1.80%

Type

Habitat	Taxonomy	Distribution
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	5.41%
Coastal	Environmental → Aquatic → Marine → Coastal	6.31%
Composting	Engineered → Solid Waste → Wood → Composting	1.80%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.80%
Inlet	Environmental → Aquatic → Marine → Inlet	1.80%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.41%
Lake	Environmental → Aquatic → Freshwater → Lake	7.21%
Lentic	Environmental → Aquatic → Freshwater → Lentic	6.31%
Oceanic	Environmental → Aquatic → Marine → Oceanic	2.70%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	2.70%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.31%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	8.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.41%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	2.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.41%
Wetlands	Environmental → Aquatic → Marine → Wetlands	9.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.91%

Subtype

Habitat	Taxonomy	Distribution
Bioreactor	Engineered → Solid Waste → Wood → Composting → Bioreactor	1.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	7.21%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	4.50%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	9.91%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	6.31%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.70%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	2.70%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	1.80%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.90%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	9.91%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	8.11%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.41%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	5.41%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	4.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.70%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	2.70%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.90%

Habitat

Habitat	Taxonomy	Distribution
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	3.60%
Anaerobic Digester Digestate	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester Digestate	2.70%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	2.70%
Enrichment Culture	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture	3.60%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	7.21%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.80%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	6.31%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.41%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	6.31%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.60%
Granular Sludge	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Granular Sludge	1.80%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	2.70%
Hydrocarbon Resource Environments	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Hydrocarbon Resource Environments	1.80%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	2.70%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	2.70%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	1.80%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	5.41%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	2.70%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	1.80%
Marine Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Sediment	0.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.50%
Poplar Biomass Bioreactor	Engineered → Solid Waste → Wood → Composting → Bioreactor → Poplar Biomass Bioreactor	1.80%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.90%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	2.70%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	1.80%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.80%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.70%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	1.80%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.90%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.70%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	7.21%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.90%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	0.90%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
2124908004	Poplar biomass bioreactor microbial communities from Brookhaven National Lab, NY - total biomass decay community	Engineered
3300000032	Oil sands microbial community from Northern Alberta which degrade Naphthaline	Engineered
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental
3300002053	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR_SMTZ	Environmental
3300002219	Tailings pond microbial communities from Northern Alberta -Short chain hydrocarbon degrading methanogenic enrichment culture SCADC:	Engineered
3300002220	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011	Engineered
3300002821	Iso-alkanes.Hi.seq-Iso3T	Engineered
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
PBDC3_07770610	2124908004	Poplar Biomass Bioreactor	QLAKPFPKNEKAEDPLIMRTDDMKEFSEVIRSKIIPTTFVFQCTLCGLEISDYDRHFGLIKMNQHVMSEHANQVKSLDMEDLYSRKPTVVLESF
Draft_00223572	3300000032	Hydrocarbon Resource Environments	MKDFNEVVKQKIIPTTFVFRCTICGFEVTDCDRHFGIIKMNDHMIANHSGEVNFLAKEDLYSRKANVVLDSFN*
JGIcombinedJ13530_1033685153	3300001213	Wetland	MKEFKDVIKFKTIPTTFVFHCSLCGFEITEYDRHFGLIKMNEHVIAKHSKEVESLDKEDLYSRKPTIVLESF*
JGIcombinedJ13530_1036343111	3300001213	Wetland	MKEFKDVIKFKTIPTTFVFHCSLCGFEITEYDRHFGLIKMNEHVIAKHSREVESLDKEDLYSRKPTIVLESF*
JGIcombinedJ13530_1057328581	3300001213	Wetland	MKDFKEAVKIKIIPTTFVYRCTLCGFEMTDYDRHFGLIKMNEHIISNHSKEVDSLGREDLYSRKLEIPLDSFD*
JGIcombinedJ13530_1068248542	3300001213	Wetland	MKEFKDVIKFKTIPTTFVFHCSLCGFEITEYDRHFGLIKMNDHVIQKHSNEVSSLDKEELYSRKPSITLESF*
SMTZ23_1000344916	3300002053	Marine Sediment	MSIKEFKDVVKLRIIPATFVFRCSLCGFEISNYDRHLGLIKMNEHIISSHSTEVNSLGKEDLYSRKPEIVLGSF*
SCADCLC_102159241	3300002219	Hydrocarbon Resource Environments	MKDFNEVVKQKIIPTTFVFRCTICGFEVTDCDRHFGIIKMNDHMIANHSGEVNFLAKEDLYSRKPNVVLDSFN*
MLSBCLC_104983771	3300002220	Hydrocarbon Resource Environments	MKDFNEVVKQKIIPTTFVFRCTICGLMKMNDHMIANHSGEVNFLAKEDLYSRKANVVLDSFN*
MLSBCLC_105447194	3300002220	Hydrocarbon Resource Environments	MKEFNEVIKLKIIPTTFVLRCTLCGFETTDYDQHFGLIKMNEHMISKHHTEVNFLGKEDLYSRKTNIILDNF*
Iso3TCLC_100069934	3300002821	Hydrocarbon Resource Environments	MRSSGDMKDFNEVVKQKIIPTTFVFRCTICGFEVTDCDRHFGIIKMNDHMIANHSGEVNFLAKEDLYSRKANVVLDSFN*
JGI20214J51088_101597933	3300003432	Wetland	MKDFKDVIKSKTIPTTFVFHCTLCGFEIAEYDRHFGLIKMNEHVISKHSNDVKSLDMEDLYSRKPAITLESF*
JGI20214J51088_107654511	3300003432	Wetland	MKEFKDVIKFKTIPTTFVFHCSLXGFEITEYDRHFGLIKMNEHVISKHSKEVESLDKEDLYSRKPTIVLESF*
JGI20214J51650_103329422	3300003541	Wetland	IPTTFVFHCTLCGFEIAEYDRHFGLIKMNEHVISKHSNDVKSLDMEDLYSRKPAITLESF
JGI20214J51650_111442141	3300003541	Wetland	MKDFKDVIKLKVVPATFVFRCSLCGFEVSNYDRHFGLITMNDHIIAKHSQEVQSLDKEDLYSRKPEIMLESD*
Ga0031655_100623873	3300003852	Freshwater Lake Sediment	MKEFKDVVKLKIVPATFVYRCAICGFTIDNYDRHFGLIEMNKHMISNHSTEVNSLDEEDLYSRKPDVALERF*
Ga0065201_16099591	3300004459	Sediment	MDMKEFKEVVKLKIIPTTFVFRCTLCGFEMTNYDRHFGLIKMNEHIISNHSTEVNSLGKEDLYSRKPEIVLDRF*
Ga0068711_100056812	3300005144	Enrichment Culture	MKDFKEVVKLKIIPTTFVFRCSLCGAEITNYDRHFGLIKMNEHIVANHSKEVNSLGREDLYSRKMDIILEKF*
Ga0068712_10158545	3300005252	Enrichment Culture	MDLKDFREVVKLKIIPTTFVFRCTLCGFEMTNYDRHLGLIKMNEHMISNHSTEVNSLGREDLYSRKPQIALDKF*
Ga0074230_19129791	3300005504	Poplar Biomass Bioreactor	QLAKPFPKNEKAEDPLIMRTDDMKEFSEVIRSKIIPTTFVFQCTLCGLEISDYDRHFGLIKMNQHVMSEHANQVKSLDMEDLYSRKPTVVLESF*
Ga0074469_107263042	3300005832	Sediment (Intertidal)	MELKDFKEVVKLKMIPTTFVFRCTLCGLEITNYDRHFGLIKMNQHIISNHSKEVNSLGKEDLYSRKPEIVLDKF*
Ga0079037_1011088301	3300006224	Freshwater Wetlands	MQDFTDVIKFKIVPTTFVFHCSLCDFEVSEYDRHFGLIKMNQHVMSEHSADVKSLDMEDLYSRKPTIVLDSF*
Ga0111545_10615662	3300007918	Sediment	LKDFREVIKLKIVPTTFEFRCTLCGFKIVNYDRHFGLIQMNEHVLEKHAEEVQSLDKEELYSRKPDITLDSD*
Ga0115362_1020559872	3300008416	Sediment	MDIKEFNEVVKLKIIPTTFVFRCTLCDFEMTNYDRHLGLIKMNEHLVSDHSTEVNFLAREDLYSRKMEMKLDSF*
Ga0105106_100489302	3300009078	Freshwater Sediment	MVIKEFEEVVKMKIIPATFIFRCTLCGFENTNYDRHFGLIKMNEHIVSCHSAEINPLGTEDLYSRKPEVALDSF*
Ga0105106_103148602	3300009078	Freshwater Sediment	MQEFKDVVKLKIIPTTFVLHCSICGFEVTSYDRLLGLIKMNEHIISDHSKEVSFLGKEDLYSRKSEIVLDRF*
Ga0105099_102758942	3300009082	Freshwater Sediment	MVIKEFEEVVKMKIIPTTFIFRCTLCGFENTNYDRHFGLIKMNEHIVSCHSAEINPLGTEDLYSRKPEVALDSF*
Ga0105107_112677811	3300009087	Freshwater Sediment	DEMVIKEFEEVVKMKIIPTTFIFRCTLCGFENTNYDRHFGLIKMNEHIVSCHSAEINPLGTEDLYSRKPEVALDSF*
Ga0118724_100549617	3300009127	Marine	MDIKEFNEVVKCKTIPTTFVFRCTLCGFEMTNYDRHLGLIKMNEHIVSNHSTEVNSLGREDLYSRKMEIELDSF*
Ga0118724_10463492	3300009127	Marine	MDIKEFKEVVKLKIIPTTFVFRCTLCGFEMTEYDRHLGLIKMNEHIVSNHSKEVNSLGKEDLYSRKMEIVLDKF*
Ga0118724_10514501	3300009127	Marine	MDIKEFNEVVKLKIIPTTFVFRCTLCGLEMTNYDRHLGLIKMNEHIVSNHSTEVNSLGREVM*
Ga0118724_11165242	3300009127	Marine	MKVFEEVVKMKIIPTTFAFRCTLCGFEITDYDRHFGLIKMNEHIISKHATEVDSLGKEALYSRKQEIVLDKF*
Ga0118724_12116072	3300009127	Marine	MDIKDFKEVVKLKIIPTTFVFRCTLCGFEMTDYDRHLGLIKMNEHMISNHSTEVNSLGREALYSRKPEIVLDRF*
Ga0105102_102531711	3300009165	Freshwater Sediment	IGVSGTVRGGIYKVKEFQEVVKMKIIPTTFVFCCTLCGSKIINYDRHFGLIAMNKHILDKHSSEITALNTEDLYSRKPDIMLERF*
Ga0113563_117097933	3300009167	Freshwater Wetlands	FRCTECGLEITEYDYHFGLIKMNEHVISQHCDEVQSLDKEDLYSRKPSVILDGF*
Ga0113563_120316951	3300009167	Freshwater Wetlands	MKDFSEVVKAKTIPTTFVFRCQLCGFEVTDFDRHFGLIKMNQHIKAVHGGEVRSLDMEDLYSRKLTVVLEEF*
Ga0113563_122101732	3300009167	Freshwater Wetlands	MKEFKDAVKLKIIPTTFIFKCSVCGEEITDYDRHFGLIKVNDHMVTKHINEVNSLSKEDLYSRRADISFERFE*
Ga0105097_102617602	3300009169	Freshwater Sediment	MVIKEFEEVVKMKIIPTTFVFRCTLCGFENTNYDRHFGLIKMNEHIVSCHSAEINPLGTEDLYSRKPEVALDSF*
Ga0115028_108994891	3300009179	Wetland	MKDFKDVIKSKTIPTTFVFHCTLCGFEIAEYDRHFGLIKMNEHVISKHSNDVKSLDMEDLYSRKPAITLDSF*
Ga0117912_10385205	3300009329	Marine	DIKEFNEVVKCKTIPTTFVFRCTLCGFEMTNYDRHLGLIKMNEHIVSNHSTEVNSLGREDLYSRKMEIELDSF*
Ga0118657_105256811	3300009506	Mangrove Sediment	KIIPTTFVFRCEICGLEITNYDRHFGLIKMNQHVVAEHPKQVNSLGKEDLYSRKMEISLEKF*
Ga0118657_108265071	3300009506	Mangrove Sediment	MKEFNEVVKFKIIPTIFMYRCTLCGAEITNSDRHFGLIQMNEHIVSKHSKEVNSLGREDLYSRKTEIVLEKF*
Ga0118657_125368882	3300009506	Mangrove Sediment	VKEFKEVVKLKIIPTTFVFRCDLCGFEVTNYDRHFGMIKMNEHLVSAHPKEVNTLGREDLYSRKTDIALKKF*
Ga0116234_12474182	3300009542	Anaerobic Biogas Reactor	MKEFNEVIKFKTIPITFMFHCTLCNYEITDYDRHFGLIRMNEHVIAAHPTEVHSLDKEDLYSRKPAIVLENF*
Ga0123335_11954262	3300009680	Anaerobic Biogas Reactor	PITFMFHCTLCNYEITDYDRHFGLIRMNEHVIAAHPTEVHSLDKEDLYSRKPAIVLENF*
Ga0116235_10853252	3300010310	Anaerobic Biogas Reactor	FAFALNDSRGKMKDRKMKDFKEVIKSKIIPTTFVFHCSLCGFEISDYDRHFGLIKMNRHVMAEHEKEVKSLDMEDLYSRKPTITLESF*
Ga0136653_100645522	3300010319	Anoxic Lake Water	MQEFTEVIKLKVIPTTFVFRCTLCGFETAECDRHLGLIKMNEHVLAKHPREVKCLDNEDLYSRKPNIVLGE*
Ga0136851_105574292	3300010413	Mangrove Sediment	MKDFKEVVRQKIIPTTFVFRCTLCGLEITNYDRHFGLIKMNEHIISNHSTEVKSLDKEDLYSRKPEIILDKF*
Ga0136851_117025171	3300010413	Mangrove Sediment	MGTAEIKEFQDVVQLKIIPTTFVFRCTLCGFEITNFDRHLGLIKMNEHIASKHSNEANPLGKEDLYSRKPHVVLNHF*
Ga0153915_100606493	3300012931	Freshwater Wetlands	MRDKMKEFKDVIKEKTIPITFMFRCTLCGHEISEYDYHFGLIKMNEHVIANHSSEVKSLDMEDLYSRKPAVVLENY*
Ga0153915_101654244	3300012931	Freshwater Wetlands	MKEFRDVVKTKTIPTTFIFRCTLCGFELSEYDRHFGLIKMNQHVMSEHPGEVQSLDMEDLYSR
Ga0153915_107314022	3300012931	Freshwater Wetlands	MKEFKEVVKLKIIPTTFVLHCTLCGFEITDYDRHLGLIKMNDHIISNHSKEVNSLGKEDLYSRKQEIVLEKF*
Ga0153915_123150291	3300012931	Freshwater Wetlands	MGMKEFEEVIKLKIIPTTFVFRCTLCGFENTNYDRHFGLIKMNEHIVSNHSAEINPLGTEDLYSRKPEIMLDSF*
Ga0153916_106241882	3300012964	Freshwater Wetlands	MKDFKEVIKAKTIPTTFVFHCTLCGFEIADYDKHFGLIKMNEHVISKHAAEVQSLDMEDLYSRKPMITLDTF*
Ga0153916_121245372	3300012964	Freshwater Wetlands	MKDFQEVIKMKIVPATFVFRCTLCGFELTDYDRHLGLIEMNNHIISKHSTEVNSLGREDLYSRKLEIVLDGF*
Ga0153916_132725811	3300012964	Freshwater Wetlands	MKEFKEVVKLKIIPTTFVLHCTLCGFEITDYDRHLGLIKMNDHIISNHSKEVNSLGREDLYSRKPEIVLDKF*
Ga0163200_11833851	3300013088	Freshwater	MRSSDDMDIKDFKEVVKLKIIPTTFVFRCTLCGFEMTDYDRHLGLIKMNEHMVSNHSTEVNSLGREDLYSRKQEIVLDRF*
(restricted) Ga0172375_1000010086	3300013137	Freshwater	MKEFKDAVRLKIVPATFVFRCTVCGAEITNYDRHFGLIEMNKHLITKHSTEVKSLDEEELYSRKPEIALERF*
Ga0182010_107377321	3300014490	Fen	MKDFKDVVKLKTVPTTFTFHCSLCKFEITEFDWHFGLIKMNDHIIEKHGKEVQSLDKEDL
Ga0182011_105761141	3300014496	Fen	MKSFDEVIKLKTIPTTFIFRCSLCGFEAKNYDRHFGLIEMNEHLIQKHPIDVRSLDKEDL
Ga0182019_102132892	3300014498	Fen	MKSFDEVIKLKTIPTTFIFRCSLCGFEAKNYDRHFGLIEMNEHLIQKHPIDVRSLDKEDLYSRKPSVELEEF*
Ga0182019_102200472	3300014498	Fen	MKSFDEVIKLKTIPTTFIFRCSLCGFEAKNYDRHFGLIEMNEHLIQKHPTEVRSLDKEDLYSRKPSIELEEF*
Ga0182021_108379852	3300014502	Fen	MKDFKDIVKLKTVPTTFTFHCSICKFEITEFDWHFGLIKMNDHIIEKHGKEVQSLDKEDLYSRRPVIHLEEF*
Ga0182021_111955771	3300014502	Fen	MKEFKDVIKFKTVPTTFVFHCTICGFEITEYDRHFGLIKMNDHVISKHSNEVQSLDKEDLYSRKPTIVLDNF*
Ga0182021_116870752	3300014502	Fen	MKDFKDVIKLKTIPTTFHFHCSLCNFEITEYDWHFGLIKMNDHVIEKHAGEVQSLDKEDLYSRRPVITLETY*
Ga0182027_109071952	3300014839	Fen	MKSFNEVIQLKTIPTTFIFRCSLCGFEAKNYDRHFGLIEMNEHLIQKHPTEVRSLDKEDLYSRKPSIELEEF*
Ga0164321_101208252	3300014903	Marine Sediment	MDIKEFNEVVKLKIIPTTFVFRCTLCGFEMTNYDRHFGLIKMNEHIVSDHSTEVNFLGREDLYPRKMEIELDSF*
Ga0164321_104609292	3300014903	Marine Sediment	MEIKEFNEVVKLKVIPTTFVFRCTLCDFEMTNYDRHLGLIKMNEHIVSDHSTEVNFLGREALYSRKMEIELDSF*
Ga0172382_100699943	3300015214	Landfill Leachate	MKEFNEVIKFKTIPITFMFHCTLCNYEITDYDRHFGLIRMNEHVIAAHPTEVHSLDKEDLYSRKPAIVLEDF*
Ga0172382_101862422	3300015214	Landfill Leachate	MGRGEAMKEFREVIKFKTIPTEFVFRCSLCDYETKNYDRHFGLIKMNEHILSSHSTEVRSLDKEDLYSRRPAIVLDSF*
Ga0187870_12000201	3300017998	Peatland	VTIRTRNIDNMKDFKEVVKMKMIPTTFAFRCILCGFEIIDSDRHFGIIKMNEHMISNHSNEVNSLDKENLYSRKTEIVLDKF
Ga0187878_12741232	3300018005	Peatland	MKDFKEVVKMKMIPTTFAFRCILCGFEIIDSDRHFGIIKMNEHMISNHSNEVNSLDKENLYSRKTEIVLDKF
Ga0187861_103866011	3300018020	Peatland	MKDFKDVIKLKTIPTTFHFHCSLCQFEITEYDWHFGLIKMNDHVIEKHAGEVQSLDKEDLYSRRPVITLESF
Ga0187881_101364581	3300018024	Peatland	MKDFKEVVKMKMIPTTFAFRCILCGFEIIDSDRHFGIIKMNEHMISNHSNEVNSLDKENLYSRKTEIVLDK
Ga0187881_104815021	3300018024	Peatland	MKDFKDVVKLKTIPTTFTFHCSLCKFEITEFDWHFGLIKMNDHIIEKHGKEVQSLDKEDLYSRRP
Ga0214088_16879552	3300020814	Granular Sludge	MKDFKDVIKLKTVPTTFHFRCSICNFEITEYDWHFGLIKMNDHVIEKHPDDVQSLDKEDLYSRRPVITLDSF
Ga0226659_105189551	3300021603	Granular Sludge	LCGFEISDYDRHFGLIKMNEHVMKNHSKEVKSLDMEDLYSRKPTVVLDNF
Ga0226657_101716642	3300021843	Anaerobic Digester Digestate	MKEFQEVIKSKIIPTTFVFQCTICGLEISDYDRHFGLIKMNQHVIAEHSDQVKSLDMEDLYSRKPTIVLE
Ga0212121_100029055	3300022556	Anoxic Lake Water	MQEFTEVIKLKVIPTTFVFRCTLCGFETAECDRHLGLIKMNEHVLAKHPREVKCLDNEDLYSRKPNIVLGE
Ga0255811_104984131	3300023207	Anaerobic Digester Digestate	MKEFQEVIKSKIIPTTFVFQCTICGLEISDYDRHFGLIKMNQHVIAEHSDQVKSLDMEDLYSRKPTIVLENF
Ga0209610_12704672	3300025136	Anoxic Lake Water	IVRQRERREMQEFTEVIKLKVIPTTFVFRCTLCGFETAECDRHLGLIKMNEHVLAKHPREVKCLDNEDLYSRKPNIVLGE
Ga0209723_11248072	3300026311	Anaerobic Biogas Reactor	PITFMFHCTLCNYEITDYDRHFGLIRMNEHVIAAHPTEVHSLDKEDLYSRKPAIVLENF
Ga0209269_100061620	3300027051	Enrichment Culture	MKDFKEVVKLKIIPTTFVFRCSLCGAEITNYDRHFGLIKMNEHIVANHSKEVNSLGREDLYSRKMDIILEKF
Ga0209270_11708252	3300027592	Enrichment Culture	KIIPTTFVFRCTLCGFEMTNYDRHLGLIKMNEHMISNHSTEVNSLGREDLYSRKPQIALDKF
(restricted) Ga0255054_101747832	3300027856	Seawater	DTKDFKDVVILKIIPTTFVFRCTLCGFEMTNYDRHLGLNQMNEHMVSNHSTEVNSLGKEDLYSRKSEIVLDRF
(restricted) Ga0255053_103808201	3300027868	Seawater	MDMKDFKDVVKLKIIPATFVFRCTLCGFEMTNYDRHLGLNQMNEHMVSNHSTEVNSLGKEDLYSRKSEIVLDRF
Ga0209635_100292202	3300027888	Marine Sediment	MSIKEFKDVVKLRIIPATFVFRCSLCGFEISNYDRHLGLIKMNEHIISSHSTEVNSLGKEDLYSRKPEIVLGSF
Ga0209777_1000009960	3300027896	Freshwater Lake Sediment	MKEFKDVVKLKIVPATFVYRCAICGFTIDNYDRHFGLIEMNKHMISNHSTEVNSLDEEDLYSRKPDVALERF
Ga0209777_101755752	3300027896	Freshwater Lake Sediment	MDAKDFKDVVKLKIVPTTFAFRCTLCGFETTASDRHLGLIKMNEHMVAKHSTEVNPLGREDLYSRKPEITLEKF
Ga0209777_101883642	3300027896	Freshwater Lake Sediment	MKEFKDVVKLKIVPATFVYRCAICGLTIDNYDRHFGLIEMNKHMISNHSTEVNTLDEEDLYSRKPDVALERF
Ga0209777_106384181	3300027896	Freshwater Lake Sediment	MKEFREVVKLKIVPATFVYRCTICGFNVENFDRHFGLIEMNKHMISNHSTEVNSLDEEDLYSRKPDIALERF
Ga0209777_108724762	3300027896	Freshwater Lake Sediment	MKEFREVIKAKTIPTTFVFHCTLCGFEIADYDKHFGLIKMNEHVISKHATEVQSLDMEDLYSRKPTITLDTF
Ga0209427_106890342	3300027901	Marine Sediment	MDMKEFKEVVKLKIIPATFVFRCTLCGFEVTNYDRHLGLIEMNRHISSNHYTEVNSLGREDLYSRKPEIVLERF
Ga0209048_105196892	3300027902	Freshwater Lake Sediment	MKELEEVVKLKIIPATFVFRCELCGCEITDYDRHFGLIKMNEHIIAKHAGEVNYLGKEDLYSRKPNIILEKF
Ga0209536_1013958842	3300027917	Marine Sediment	TTFAFRCTLCGFEITSYDRHLGLIDMNKHITSNHSNEVNSLSKEELYSRKTEIKLDTF
Ga0268276_12299741	3300028299	Saline Water	MKEFKDVVKYKMIPTTFVFRCTLCGTEISNPDRHFGLIKMNEHITSSHSTEVNVLGREDLYSRKPNIV
Ga0265297_100526537	3300029288	Landfill Leachate	MRDSDDMRDFKEVVKMKIVPAVFVFRCTLCDCEISDYDRHFGLIKMNEHMVSNHSKEVNPLGKEDLYSRKPEIMLDKF
Ga0311022_126238971	3300029799	Anaerobic Digester Digestate	MKDFKEVIKLKAIPTTFKFRCTLCNLEIVEYDWHFGLIKMNQHVVEAHPNEVQSLDMEELYSR
Ga0311348_114394621	3300030019	Fen	MQDFKDVVKLKTIPTTFTFHCSLCKFEITEFDWHFGLIKMNDHIMEKHAGEVQHLDKEDLYSRRPVIHLEEF
Ga0307425_11036912	3300031277	Salt Marsh	MKDFKEVVKMKTIPTTFVFRCDLCGTEITDYDRHFGLIKMNKHVVEKHPKDVNSLGKEDLYSRKMEITLEKF
Ga0307418_12017782	3300031341	Salt Marsh	TTFVFRCSLCGEEITDYDRHFGLIKMNKHMVEKHPKDVNSLGKEDLYSRKMEITLEKF
Ga0307423_10228513	3300031371	Salt Marsh	MKDFKEVVKLKIIPTTFVFRCEICGLEMSNYDRHFGLIKMNEHVVGKHPKEVNSLGKEDLYSRKMEISLEKF
Ga0315548_11344611	3300031551	Salt Marsh Sediment	MDIKEFKEVVKLNIIPATFYFRCTLCGFETTNYDRHLGLIDMNKHIISNHSREVNSLSREDLYSRKTEIKLDSF
Ga0315535_10695741	3300031699	Salt Marsh Sediment	MKDFKEVVKMKVIPTTFVFRCSLCGEEITDYDRHFGLIKMNKHMVEKHPKDVNSLGKEDLYSRKMEITLEKF
Ga0315280_101395911	3300031862	Sediment	MDMKDFKEVVKLKIIPTTFVFRCTLCGFEMNNYDRHSGMIKMNEHMISKHSNEVNSLGREDLYSRKSEIVLDRF
Ga0315274_119659392	3300031999	Sediment	MKEFEEVVKMKIIPTTFVFRCTLCGLEITHCDRHFGLINMNEHMISSHSTEVNSLDKEDLYSRKPQIVLDSY
Ga0315276_123998101	3300032177	Sediment	FKEVVKLKIIPTTFVFRCTLCGFEITNYDRHFGLIKMNEHMISNHSTEVNSLDKEDLYSRKPEIVLDRF
Ga0316188_105817522	3300032276	Worm Burrow	MEMKEFKDVVKLKIIPTTFVFRCTLCGFEDTTYDRHFGLIKMSEHIIEKHSGEVNSLGKEDLYSRKLNITLESF
Ga0316605_108871102	3300033408	Soil	MKDFKDVIKSKTIPTTFVFHCTLCGFEIAEYDRHFGLIKMNEHVISKHSNDVKSLDMEDLYSRKPAITLDSF
Ga0316605_110697221	3300033408	Soil	MKEFKDVIKFKTIPTTFVFHCSLCGFEITEYDRHFGLIKMNEHVIAKHSKEVESLDKEDLYSRKPTIVLESF
Ga0316630_103498292	3300033487	Soil	MKDFDEIVKLKVVPTTFVFKCTLCGFEVTDFDRHLGLIKMNNHVLANHSKEVNSLGMEDLYSRKQEIALGKF