Metagenome / Metatranscriptome Family F085788

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085788
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	60 residues
Representative Sequence	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD
Number of Associated Samples	103
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.27 %
% of genes near scaffold ends (potentially truncated)	51.35 %
% of genes from short scaffolds (< 2000 bps)	63.06 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.595 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.225 % of family members)
Environment Ontology (ENVO)	Unclassified (41.441 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.360 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 38.10% Coil/Unstructured: 61.90%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF12833	HTH_18	24.32
PF04542	Sigma70_r2	19.82
PF00589	Phage_integrase	5.41
PF00753	Lactamase_B	5.41
PF01850	PIN	2.70
PF04909	Amidohydro_2	1.80
PF13231	PMT_2	1.80
PF00248	Aldo_ket_red	1.80
PF14319	Zn_Tnp_IS91	1.80
PF08281	Sigma70_r4_2	1.80
PF06114	Peptidase_M78	0.90
PF03466	LysR_substrate	0.90
PF01527	HTH_Tnp_1	0.90
PF12704	MacB_PCD	0.90
PF01872	RibD_C	0.90
PF13751	DDE_Tnp_1_6	0.90
PF07676	PD40	0.90
PF01904	DUF72	0.90
PF13785	DUF4178	0.90
PF00560	LRR_1	0.90
PF00486	Trans_reg_C	0.90
PF12680	SnoaL_2	0.90
PF02737	3HCDH_N	0.90
PF00106	adh_short	0.90
PF01790	LGT	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	19.82
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	19.82
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	19.82
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	19.82
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.90
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.90
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.90
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG0682	Prolipoprotein diacylglyceryltransferase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.90
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.90
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.90
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.90
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.90
COG4886	Leucine-rich repeat (LRR) protein	Transcription [K]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.59 %
Unclassified	root	N/A	5.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.59 %
Unclassified	root	N/A	5.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.59 %
Unclassified	root	N/A	5.41 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	56.76 %
Unclassified	root	N/A	5.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.70 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	24.32 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	23.42 %
Unclassified	root	N/A	5.41 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.42 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	15.32 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.21 %
Unclassified	root	N/A	5.41 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	0.90 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.42 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	15.32 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.21 %
Unclassified	root	N/A	5.41 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.90 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	0.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.42 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	15.32 %
Unclassified	root	N/A	5.41 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.90 %
unclassified Methylococcaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	0.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.42 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	15.32 %
Unclassified	root	N/A	5.41 %
Methylococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	0.90 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	0.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|F0B48LX02HT2R2	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	506	Open in IMG/M
3300001141\|JGI12638J13249_100556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1240	Open in IMG/M
3300002245\|JGIcombinedJ26739_100063921	All Organisms → cellular organisms → Bacteria	3380	Open in IMG/M
3300002907\|JGI25613J43889_10070569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	947	Open in IMG/M
3300002914\|JGI25617J43924_10033280	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300003219\|JGI26341J46601_10124736	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	734	Open in IMG/M
3300004479\|Ga0062595_101618416	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	605	Open in IMG/M
3300005437\|Ga0070710_10058222	All Organisms → cellular organisms → Bacteria	2191	Open in IMG/M
3300005471\|Ga0070698_100110348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2716	Open in IMG/M
3300005526\|Ga0073909_10012670	All Organisms → cellular organisms → Bacteria → Acidobacteria	2600	Open in IMG/M
3300005554\|Ga0066661_10553820	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005555\|Ga0066692_10737286	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300005568\|Ga0066703_10653210	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	608	Open in IMG/M
3300005602\|Ga0070762_10055903	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300005602\|Ga0070762_10109212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1611	Open in IMG/M
3300005921\|Ga0070766_10477961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	825	Open in IMG/M
3300006052\|Ga0075029_100235872	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300006162\|Ga0075030_100019221	All Organisms → cellular organisms → Bacteria	5897	Open in IMG/M
3300006354\|Ga0075021_11194050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	500	Open in IMG/M
3300007255\|Ga0099791_10036117	All Organisms → cellular organisms → Bacteria	2184	Open in IMG/M
3300009038\|Ga0099829_11150121	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	643	Open in IMG/M
3300009520\|Ga0116214_1331068	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300009522\|Ga0116218_1087093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1422	Open in IMG/M
3300010339\|Ga0074046_10035359	All Organisms → cellular organisms → Bacteria → Acidobacteria	3387	Open in IMG/M
3300011271\|Ga0137393_10286285	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300011271\|Ga0137393_10697358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300012096\|Ga0137389_10513172	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1028	Open in IMG/M
3300012169\|Ga0153990_1008241	All Organisms → cellular organisms → Bacteria	2166	Open in IMG/M
3300012189\|Ga0137388_10034611	All Organisms → cellular organisms → Bacteria	3971	Open in IMG/M
3300012202\|Ga0137363_10284393	Not Available	1354	Open in IMG/M
3300012210\|Ga0137378_10958013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300012363\|Ga0137390_10284072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1638	Open in IMG/M
3300012683\|Ga0137398_11068267	Not Available	557	Open in IMG/M
3300012927\|Ga0137416_10946430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300012929\|Ga0137404_11245041	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300012971\|Ga0126369_12303883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300015054\|Ga0137420_1076464	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300015054\|Ga0137420_1210984	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300017934\|Ga0187803_10249161	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	704	Open in IMG/M
3300017955\|Ga0187817_10710664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	641	Open in IMG/M
3300018007\|Ga0187805_10338191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	695	Open in IMG/M
3300019888\|Ga0193751_1125894	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300020140\|Ga0179590_1226935	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	511	Open in IMG/M
3300020579\|Ga0210407_10001696	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	20079	Open in IMG/M
3300020580\|Ga0210403_10023396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4932	Open in IMG/M
3300020580\|Ga0210403_10046099	All Organisms → cellular organisms → Bacteria → Acidobacteria	3486	Open in IMG/M
3300021086\|Ga0179596_10046354	All Organisms → cellular organisms → Bacteria	1778	Open in IMG/M
3300021171\|Ga0210405_10093189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2375	Open in IMG/M
3300021403\|Ga0210397_10759963	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300021404\|Ga0210389_11030345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300021405\|Ga0210387_11260304	All Organisms → cellular organisms → Bacteria → Proteobacteria	640	Open in IMG/M
3300021478\|Ga0210402_10022254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5433	Open in IMG/M
3300021478\|Ga0210402_10043470	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3912	Open in IMG/M
3300021479\|Ga0210410_10000351	All Organisms → cellular organisms → Bacteria	55534	Open in IMG/M
3300021559\|Ga0210409_10029990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5238	Open in IMG/M
3300022726\|Ga0242654_10223050	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300022840\|Ga0224549_1028534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	758	Open in IMG/M
3300025905\|Ga0207685_10112166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1184	Open in IMG/M
3300025910\|Ga0207684_10006266	All Organisms → cellular organisms → Bacteria	10860	Open in IMG/M
3300025915\|Ga0207693_10092206	All Organisms → cellular organisms → Bacteria	2374	Open in IMG/M
3300026341\|Ga0257151_1008061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1093	Open in IMG/M
3300026354\|Ga0257180_1017924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300026355\|Ga0257149_1006767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1426	Open in IMG/M
3300026371\|Ga0257179_1000174	All Organisms → cellular organisms → Bacteria	2774	Open in IMG/M
3300026374\|Ga0257146_1026063	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	949	Open in IMG/M
3300026480\|Ga0257177_1006432	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
3300026481\|Ga0257155_1001425	All Organisms → cellular organisms → Bacteria	2604	Open in IMG/M
3300026482\|Ga0257172_1019353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1188	Open in IMG/M
3300026489\|Ga0257160_1109405	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300026496\|Ga0257157_1020850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1066	Open in IMG/M
3300026499\|Ga0257181_1086886	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300026507\|Ga0257165_1013005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1331	Open in IMG/M
3300026508\|Ga0257161_1007508	All Organisms → cellular organisms → Bacteria → Acidobacteria	1923	Open in IMG/M
3300026551\|Ga0209648_10000590	All Organisms → cellular organisms → Bacteria	27926	Open in IMG/M
3300026555\|Ga0179593_1239184	All Organisms → cellular organisms → Bacteria	3023	Open in IMG/M
3300027034\|Ga0209730_1000689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2019	Open in IMG/M
3300027071\|Ga0209214_1000543	All Organisms → cellular organisms → Bacteria	2760	Open in IMG/M
3300027326\|Ga0209731_1000923	All Organisms → cellular organisms → Bacteria	3001	Open in IMG/M
3300027371\|Ga0209418_1003461	All Organisms → cellular organisms → Bacteria	2092	Open in IMG/M
3300027604\|Ga0208324_1042558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1340	Open in IMG/M
3300027663\|Ga0208990_1016590	All Organisms → cellular organisms → Bacteria	2431	Open in IMG/M
3300027684\|Ga0209626_1021146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1552	Open in IMG/M
3300027812\|Ga0209656_10039239	All Organisms → cellular organisms → Bacteria → Acidobacteria	2746	Open in IMG/M
3300027862\|Ga0209701_10064975	All Organisms → cellular organisms → Bacteria	2318	Open in IMG/M
3300027875\|Ga0209283_10221893	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300027884\|Ga0209275_10043878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	2121	Open in IMG/M
3300027884\|Ga0209275_10410052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300027889\|Ga0209380_10444455	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	758	Open in IMG/M
3300027905\|Ga0209415_10057288	All Organisms → cellular organisms → Bacteria → Acidobacteria	4867	Open in IMG/M
3300027908\|Ga0209006_10038212	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4339	Open in IMG/M
3300027911\|Ga0209698_10059370	All Organisms → cellular organisms → Bacteria	3310	Open in IMG/M
3300028673\|Ga0257175_1005968	All Organisms → cellular organisms → Bacteria → Acidobacteria	1680	Open in IMG/M
3300028806\|Ga0302221_10012712	All Organisms → cellular organisms → Bacteria	4350	Open in IMG/M
3300030524\|Ga0311357_10836795	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	823	Open in IMG/M
3300031090\|Ga0265760_10149868	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	764	Open in IMG/M
3300031233\|Ga0302307_10643516	Not Available	533	Open in IMG/M
3300031708\|Ga0310686_100100473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1225	Open in IMG/M
3300031708\|Ga0310686_110223154	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	548	Open in IMG/M
3300031708\|Ga0310686_111952625	Not Available	659	Open in IMG/M
3300031753\|Ga0307477_10190393	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300031754\|Ga0307475_10583511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300031820\|Ga0307473_10313501	Not Available	993	Open in IMG/M
3300031890\|Ga0306925_10057719	All Organisms → cellular organisms → Bacteria	4059	Open in IMG/M
3300031962\|Ga0307479_10047428	All Organisms → cellular organisms → Bacteria → Acidobacteria	4129	Open in IMG/M
3300032041\|Ga0318549_10357858	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	658	Open in IMG/M
3300032059\|Ga0318533_10060916	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2536	Open in IMG/M
3300032160\|Ga0311301_10624024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1544	Open in IMG/M
3300032174\|Ga0307470_10093316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1700	Open in IMG/M
3300033402\|Ga0326728_10003167	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	52145	Open in IMG/M
3300033755\|Ga0371489_0135835	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1364	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.10%
Host-Associated	Host-Associated	0.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.99%
Aquatic	Environmental → Aquatic	8.11%
Fungi	Host-Associated → Fungi	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.59%
Peat	Environmental → Terrestrial → Peat	5.41%
Freshwater	Environmental → Aquatic → Freshwater	4.50%
Sediment	Environmental → Aquatic → Sediment	3.60%
Mycelium	Host-Associated → Fungi → Mycelium	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Loam	Environmental → Terrestrial → Soil → Loam	18.02%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.90%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.90%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.11%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.70%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.70%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.80%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.90%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.90%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.90%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
3300001141	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012169	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC074 MetaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_00039820	2170459002	Grass Soil	VIEVIPAGNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEARLADADSWRITGHSEVAGTSSDQYRQRACG
JGI12638J13249_1005561	3300001141	Forest Soil	VIAAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD*
JGIcombinedJ26739_1000639212	3300002245	Forest Soil	VIEAIPASNDVKLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSRRITGNPQVIVRRSD*
JGI25613J43889_100705692	3300002907	Grasslands Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD*
JGI25617J43924_100332802	3300002914	Grasslands Soil	IPASNDVNLPGLATTETLTRHVNLNYFSEAVSWQGEERLADADSWRITGNPQVIVRRSD*
JGI26341J46601_101247361	3300003219	Bog Forest Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERFADADSWRITGNPQVIVRRSD*
Ga0062595_1016184162	3300004479	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITQP
Ga0070710_100582223	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGN
Ga0070698_1001103483	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VIEAIPASNDLNLPGLATTETLTRHVNLNYFSDAVSWEGEERLADADSWRITGNSEVIG*
Ga0073909_100126702	3300005526	Surface Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADS*
Ga0066661_105538203	3300005554	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPSV
Ga0066692_107372861	3300005555	Soil	VIEAIPASNDVNLPGLATTEALTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIV
Ga0066703_106532102	3300005568	Soil	VIEAIPASNDVNLPGLATTETLTRPVNLNYFSEAVSWEGEERLADADSWRITG
Ga0070762_100559033	3300005602	Soil	SNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADAGSWRITGNPQVIVRRSD*
Ga0070762_101092123	3300005602	Soil	SNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD*
Ga0070766_104779612	3300005921	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADAESWRIK*
Ga0075029_1002358722	3300006052	Watersheds	PASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD*
Ga0075030_1000192219	3300006162	Watersheds	RVVIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWKGEERLADADSWRITGNPQVIVRRSD*
Ga0075021_111940502	3300006354	Watersheds	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLVWYRSFH
Ga0099791_100361173	3300007255	Vadose Zone Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVLGRISIDQTRLY*
Ga0099829_111501211	3300009038	Vadose Zone Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRIT
Ga0116214_13310683	3300009520	Peatlands Soil	VIEAIPASDDVNLPGLAPTETLTRHVNLNYFSEAVSWEGDERLADADSWRITG
Ga0116218_10870932	3300009522	Peatlands Soil	VIDAIRASNDVNLPGLATPETLTRHVNLNCFSEAVSWDGEEGLADADSWRITGNPQVIVRRSD*
Ga0074046_100353593	3300010339	Bog Forest Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERFADADSWQITGNPQVIVRRSD*
Ga0137393_102862851	3300011271	Vadose Zone Soil	SNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVLGRISIDQTRLY*
Ga0137393_106973581	3300011271	Vadose Zone Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADS
Ga0137389_105131722	3300012096	Vadose Zone Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQYRSSVGLVSINAQLVRKSSTE*
Ga0153990_10082413	3300012169	Attine Ant Fungus Gardens	VNLPGLATTETLTRHVNLNYFSEAVSWEGEERLVDADSWRITGNPQVIVRRSD*
Ga0137388_100346113	3300012189	Vadose Zone Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPSVIR*
Ga0137363_102843931	3300012202	Vadose Zone Soil	LPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD*
Ga0137378_109580131	3300012210	Vadose Zone Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAASWEGEERLADADSWRITGYSSLIGLGKSCRPN
Ga0137390_102840721	3300012363	Vadose Zone Soil	LPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGSPQVIVRRSD*
Ga0137398_110682671	3300012683	Vadose Zone Soil	VNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD*
Ga0137416_109464301	3300012927	Vadose Zone Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLANADSWRITGNPQVIVRRSD*
Ga0137404_112450412	3300012929	Vadose Zone Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSRRITGNPQVIVRRSD*
Ga0126375_115123021	3300012948	Tropical Forest Soil	PASNDVNLPGLATTETLTRHVNLNYFSKAVSWEGAERLADADSWRFTSY*
Ga0126369_123038833	3300012971	Tropical Forest Soil	RPRVVIEVIHAGNDVNLPGLATTETLTRHVNLNYFPEAVSWEGEARLADADS*
Ga0137420_10764641	3300015054	Vadose Zone Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVLGRISIDKRAFRRQCLIS*
Ga0137420_12109842	3300015054	Vadose Zone Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGVERLADADSWRITGNPQVIVRRSD*
Ga0187803_102491611	3300017934	Freshwater Sediment	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEARLADADSWRITGNPQVIGSSVGLVS
Ga0187817_107106642	3300017955	Freshwater Sediment	VIEVIPAGNDVNLPGLATTETATRHVNLNYFSEAVSWEGEARLADADSWRIT
Ga0187805_103381911	3300018007	Freshwater Sediment	VIEVIPAGNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERWADADSCRITGQLE
Ga0193751_11258942	3300019888	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPHVIVRRSD
Ga0179590_12269351	3300020140	Vadose Zone Soil	VIEAIPASDDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD
Ga0210407_1000169623	3300020579	Soil	VIEAITASNDVNPPGLATTETPTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIRADIPAMAFLS
Ga0210403_100233962	3300020580	Soil	MRREPRVVIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD
Ga0210403_100460994	3300020580	Soil	VIEAIPASNDLNLPGLATTETLTRHVNLNYFSEAVSWEGEARLADADSWRITGNPQVIGSSF
Ga0179596_100463541	3300021086	Vadose Zone Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITG
Ga0210405_100931892	3300021171	Soil	MRREATRSVEAIPASNAVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD
Ga0210397_107599631	3300021403	Soil	EKPRVVIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD
Ga0210389_110303451	3300021404	Soil	YACAERPRVVIEAIPASNDVNLPGLATTETITRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD
Ga0210387_112603043	3300021405	Soil	DVNPPGLATTETPTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIRADIPAMAFLS
Ga0210402_100222545	3300021478	Soil	VIEAIPASNDVNLPGRATTETVTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD
Ga0210402_100434705	3300021478	Soil	VIAIPASNDVNLQGRAPTETVTRHVNLNYLSEAVSWEGEERLADADSWRITRSPLVIVRRSD
Ga0210410_100003514	3300021479	Soil	MRREATRSVEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD
Ga0210409_100299909	3300021559	Soil	VIEAIPASNDVNLPWLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD
Ga0242654_102230501	3300022726	Soil	VIEVIHAGNDVNPPGLATTETLTQHVNLNYFSEAVSSEVKPRLADA
Ga0224549_10285341	3300022840	Soil	VIEVIPAGNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEARLADADSWRITGKPQVIGSSVYR
Ga0207685_101121661	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGKPEAI
Ga0207684_1000626610	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VIAAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD
Ga0207693_100922061	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSG
Ga0257151_10080613	3300026341	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGKQEGTQ
Ga0257180_10179241	3300026354	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGKPGAP
Ga0257149_10067671	3300026355	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNSSITLSGKSTDHPPGT
Ga0257179_10001744	3300026371	Soil	EGHVVVIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITSNPSIIR
Ga0257146_10260632	3300026374	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVLGRISIDKRLY
Ga0257177_10064321	3300026480	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVR
Ga0257155_10014251	3300026481	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIV
Ga0257172_10193533	3300026482	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNP
Ga0257160_11094052	3300026489	Soil	HPPSNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEARLADADSWRITGKLEVIPR
Ga0257157_10208502	3300026496	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQIIVRRSD
Ga0257181_10868862	3300026499	Soil	VIEAIPASDDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVLGR
Ga0257165_10130051	3300026507	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVLGRISIDQTR
Ga0257161_10075084	3300026508	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITSNAEVILEFR
Ga0209648_1000059032	3300026551	Grasslands Soil	ERPRVVIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWQGEERLADADSWRITGNPQVIVRRSD
Ga0179593_12391844	3300026555	Vadose Zone Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADFWRITGNPQVIVRRSD
Ga0209730_10006891	3300027034	Forest Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAASWEGEERLADADSWRITGNPQVIVRRSD
Ga0209214_10005434	3300027071	Forest Soil	VIAAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITSKPYLTD
Ga0209731_10009231	3300027326	Forest Soil	VIEAIPASNDVNLSGLTTTETLTRHVNLNYFSKAVSWEGEERLADADSWRITGNPQVIARRSD
Ga0209418_10034614	3300027371	Forest Soil	VIAAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPEIIPR
Ga0208324_10425582	3300027604	Peatlands Soil	VIDAIRASNDVNLPGLATPETLTRHVNLNCFSEAVSWDGEEGLADADSWRITGNPQVIVRRSD
Ga0208990_10165902	3300027663	Forest Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVLGRISIDKRASRQCLIF
Ga0209626_10211462	3300027684	Forest Soil	VIEAIPASNDVNLPGFATTETLTRQVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD
Ga0209656_100392393	3300027812	Bog Forest Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERFADADSWRITGNPQVIVRRSD
Ga0209701_100649751	3300027862	Vadose Zone Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVLGRISIDQTRLY
Ga0209283_102218933	3300027875	Vadose Zone Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVTV
Ga0209275_100438783	3300027884	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADAGSWRITGNPQVIVRRSD
Ga0209275_104100521	3300027884	Soil	ASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD
Ga0209380_104444552	3300027889	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADAESWRIK
Ga0209415_100572882	3300027905	Peatlands Soil	VIEAIPASDDVNLPGLAPTETLTRHVNLNYFSEAVSWEGDERLADADSWRITGNPQVIVRRSD
Ga0209006_100382122	3300027908	Forest Soil	VIEAIPASNDVKLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSRRITGNPQVIVRRSD
Ga0209698_100593705	3300027911	Watersheds	AIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWKGEERLADADSWRITGNPQVIVRRSD
Ga0257175_10059684	3300028673	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNSDVMRL
Ga0302221_100127121	3300028806	Palsa	AERPRVVIEVIPAGNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEARLADADSWRITGKPQVIGSSVYR
Ga0311357_108367951	3300030524	Palsa	VIEVIPAGNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEARLADADSWRITGKPQ
Ga0265760_101498682	3300031090	Soil	VIEAIPASNDVNLPGLATTETLTRQVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD
Ga0302307_106435161	3300031233	Palsa	VVIEVIPAGNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEARLADADSWRITGKPQVIGSSVYR
Ga0310686_1001004733	3300031708	Soil	VIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSW
Ga0310686_1102231541	3300031708	Soil	VIEAIPASNDVNLPELATTETLTRHVNLNYFSEAVSWEGEERLADADSWRIT
Ga0310686_1119526252	3300031708	Soil	NDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVCRSD
Ga0307477_101903931	3300031753	Hardwood Forest Soil	NLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD
Ga0307475_105835111	3300031754	Hardwood Forest Soil	VERPRVVIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD
Ga0307473_103135011	3300031820	Hardwood Forest Soil	RVVIEAIPASNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGNPQVIVRRSD
Ga0306925_100577196	3300031890	Soil	VIEVSHAGNDVNLPGLATTETLTRHVNLNYFSEAVSWEGEARLTDVDSWRIT
Ga0307479_100474285	3300031962	Hardwood Forest Soil	NDVNLPGLATTETLTRHVNLNYFSEAVSWEGEQRLADADSWRITGNPQVIVRRSD
Ga0318549_103578582	3300032041	Soil	VIEVSHAGNDINLPGLATTETLTRHVNLNYFSEAVSWEGEARLTDVDSWRITG
Ga0318533_100609161	3300032059	Soil	VIEVSHAGNDINLPGLATTETLTRHVNLNYFSEAVSWEGEARLTDVDSWRIT
Ga0311301_106240241	3300032160	Peatlands Soil	VIEAIPASDDVNLPGLAPTETLTRHVNLNYFSEAVSWEGDERLADADSWRITGNPQVIVRRS
Ga0307470_100933161	3300032174	Hardwood Forest Soil	VIEAIPASNDLNLPGLATTETLTRHVNLNYFSEAVSWEGEERLADADSWRITGKPEAIGSSD
Ga0326728_1000316726	3300033402	Peat Soil	MIEAIPASNDVNLPGLATTETLTRHVNLNYFSAAVSWESEERLADADSWRITGNPQVIVRRSD
Ga0371489_0135835_763_948	3300033755	Peat Soil	MIEAIPASNDVNLPGLATTETLTRHVNLNYFSAAVSCEERLADADSWRITGNPQVIVRRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085788

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences