Metagenome / Metatranscriptome Family F085746

Overview

Basic Information

• Family ID: F085746
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 111
• Average Sequence Length: 45 residues
• Representative Sequence: LPSDPGALKTVFELTRSGTYSGKLGIRSNLDVTNVIGAFRVNLTL
• Number of Associated Samples: 98
• Number of Associated Scaffolds: 111

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Viruses
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 100.00 %
• % of genes from short scaffolds (< 2000 bps): 95.50 %
• Associated GOLD sequencing projects: 97
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Duplodnaviria (97.297 % of family members)
• NCBI Taxonomy ID: 2731341
• Taxonomy: All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater (25.225 % of family members)
• Environment Ontology (ENVO): Unclassified (35.135 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (57.658 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 4.11%
  β-sheet: 0.00%
  Coil/Unstructured: 95.89%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF05065	Phage_capsid	10.81
PF04984	Phage_sheath_1	0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	10.81
COG3497	Phage tail sheath protein FI	Mobilome: prophages, transposons [X]	0.90

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Level 2

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	99.10 %
cellular organisms	root	All Organisms → cellular organisms	0.90 %
Unclassified	root	N/A	0.00 %

Level 3

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	97.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
Unclassified	root	N/A	0.00 %

Level 4

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	97.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
Unclassified	root	N/A	0.00 %

Level 5

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	97.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
Unclassified	root	N/A	0.00 %

Level 6

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	97.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
Unclassified	root	N/A	0.00 %

Level 7

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	97.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
Unclassified	root	N/A	0.00 %

Level 8

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	97.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
Unclassified	root	N/A	0.00 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000367|SS_2KS_010_SOILDRAFT_10196387	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	515
3300002408|B570J29032_109121731	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	602
3300002408|B570J29032_109935027	All Organisms → cellular organisms → Bacteria	3289
3300002835|B570J40625_101112784	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	667
3300003394|JGI25907J50239_1115093	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	522
3300004790|Ga0007758_10715170	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	538
3300004795|Ga0007756_11509552	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1337
3300005421|Ga0068882_1730210	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1245
3300006378|Ga0075498_1362420	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	719
3300006402|Ga0075511_1757415	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	852
3300006875|Ga0075473_10396343	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	558
3300007346|Ga0070753_1210884	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	715
3300007521|Ga0105044_10871469	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	705
3300007549|Ga0102879_1098305	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	912
3300007622|Ga0102863_1056410	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1148
3300008107|Ga0114340_1047905	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1883
3300008996|Ga0102831_1284389	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	546
3300009049|Ga0102911_1048001	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1251
3300009056|Ga0102860_1195092	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	579
3300009984|Ga0105029_115756	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	608
3300010293|Ga0116204_1119388	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	900
3300010354|Ga0129333_10587994	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	967
3300012012|Ga0153799_1080201	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	586
3300012013|Ga0153805_1097089	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	501
3300012212|Ga0150985_112405202	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	712
3300012504|Ga0129347_1103872	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	768
3300012706|Ga0157627_1060272	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	635
3300012708|Ga0157595_1011108	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	984
3300012759|Ga0157626_1055302	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	789
3300012962|Ga0129335_1170338	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1322
3300012962|Ga0129335_1215984	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	568
3300012970|Ga0129338_1414341	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	539
3300013087|Ga0163212_1033431	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1786
3300013092|Ga0163199_1225244	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	727
(restricted) 3300013132|Ga0172372_10220027	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1419
(restricted) 3300013137|Ga0172375_10841047	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	561
3300013372|Ga0177922_11162723	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	531
(restricted) 3300014720|Ga0172376_10164300	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1458
(restricted) 3300014720|Ga0172376_10744286	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	527
3300016686|Ga0180056_1013287	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1214
3300016691|Ga0180055_1069095	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1145
3300016743|Ga0182083_1409129	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	538
3300017788|Ga0169931_10265115	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1387
3300017788|Ga0169931_10993034	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	520
3300018424|Ga0181591_10247180	All Organisms → Viruses → Predicted Viral	1382
3300019201|Ga0180032_1131677	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	526
3300019229|Ga0180116_1354451	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1235
3300020074|Ga0194113_10274576	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1294
3300020083|Ga0194111_10132915	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1929
3300020083|Ga0194111_10329813	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1037
3300020196|Ga0194124_10063231	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2246
3300020220|Ga0194119_10485855	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	781
3300020221|Ga0194127_10306013	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1073
3300021091|Ga0194133_10065154	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3007
3300021963|Ga0222712_10068294	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2580
3300022176|Ga0212031_1044739	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	738
3300024348|Ga0244776_10281660	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1143
3300024480|Ga0255223_1100764	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	501
3300024531|Ga0255228_1050237	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	836
3300024536|Ga0256338_1043212	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1025
3300024536|Ga0256338_1134491	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	553
3300024537|Ga0255225_1052672	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	688
3300024537|Ga0255225_1094399	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	515
3300024537|Ga0255225_1094594	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	515
3300024543|Ga0256348_1014343	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1310
3300024549|Ga0256308_1024900	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1308
3300024559|Ga0255284_1114679	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	563
3300024562|Ga0256336_1083899	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	684
3300024569|Ga0255243_1039276	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1218
3300024572|Ga0255268_1035329	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1251
3300024573|Ga0256337_1041952	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1163
3300024573|Ga0256337_1082722	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	808
3300024852|Ga0255295_1022498	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1225
3300024852|Ga0255295_1120845	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	503
3300024858|Ga0255286_1094103	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	592
3300025655|Ga0208795_1078332	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	919
3300025687|Ga0208019_1081422	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1033
3300025732|Ga0208784_1226742	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	540
3300026425|Ga0256300_1009177	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1306
3300026564|Ga0256359_1030638	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1041
3300026568|Ga0255240_1033123	All Organisms → Viruses → Predicted Viral	1205
3300026568|Ga0255240_1131384	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	550
3300027241|Ga0208805_1088821	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	505
3300027246|Ga0208931_1026127	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1187
3300027305|Ga0208168_1046487	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	946
3300027571|Ga0208897_1106973	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	709
3300027608|Ga0208974_1059593	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1079
3300027759|Ga0209296_1187936	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	895
3300027782|Ga0209500_10391895	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	561
3300028025|Ga0247723_1128280	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	613
3300028089|Ga0255299_1024412	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1117
3300028103|Ga0255172_1044752	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	819
3300028112|Ga0256335_1163372	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	579
3300028113|Ga0255234_1138995	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	639
3300028271|Ga0255256_1101427	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	502
3300028374|Ga0306906_1051426	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	634
3300029697|Ga0256301_1015422	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1254
3300029930|Ga0119944_1042839	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	557
3300031857|Ga0315909_10195035	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1612
3300031857|Ga0315909_10316577	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1158
3300031857|Ga0315909_10614559	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	723
3300033995|Ga0335003_0089292	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1608
3300034063|Ga0335000_0004656	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11161
3300034071|Ga0335028_0095097	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1958
3300034093|Ga0335012_0097643	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1643
3300034095|Ga0335022_0425367	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	711
3300034103|Ga0335030_0352050	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	970
3300034106|Ga0335036_0577734	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	686
3300034108|Ga0335050_0248200	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	885
3300034121|Ga0335058_0450429	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	734
3300034200|Ga0335065_0742170	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	556

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.20%
Host-Associated	Host-Associated	1.80%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.30%
Plants	Host-Associated → Plants	1.80%
Terrestrial	Environmental → Terrestrial	0.90%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	71.17%
Marine	Environmental → Aquatic → Marine	24.32%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.80%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.90%

Type

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	32.43%
River	Environmental → Aquatic → Freshwater → River	25.23%
Coastal	Environmental → Aquatic → Marine → Coastal	11.71%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	10.81%
Lentic	Environmental → Aquatic → Freshwater → Lentic	7.21%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.70%
Ice	Environmental → Aquatic → Freshwater → Ice	1.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.90%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.90%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.90%
Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Alkaline	0.90%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.90%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	32.43%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	25.23%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	11.71%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	9.01%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.70%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.90%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.90%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.90%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.90%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Alkaline → Sediment	0.90%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.90%

Habitat

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	25.23%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	20.72%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	10.81%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	9.01%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.31%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	3.60%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.80%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.80%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.80%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.90%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.90%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.90%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	0.90%
Aquatic	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic	0.90%
Surface Ice	Environmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.90%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.90%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.90%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.90%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	0.90%
Alkaline Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Alkaline → Sediment → Alkaline Sediment	0.90%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
3300000367	Alkaline soda soil microbial communities from Kulunda Steppe, Russia - 2KS_010_SOIL	Environmental
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental
3300004790	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (Metagenome Metatranscriptome)	Environmental
3300004795	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (Metagenome Metatranscriptome)	Environmental
3300005421	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel4S_1600h metaT (Metagenome Metatranscriptome)	Environmental
3300006378	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_RNA1 (Metagenome Metatranscriptome)	Environmental
3300006402	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental
3300007549	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02	Environmental
3300007622	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02	Environmental
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental
3300009049	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02	Environmental
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental
3300009984	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_127 metaG	Host-Associated
3300010293	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 52m metaG	Environmental
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental
3300012013	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface Ice	Environmental
3300012212	Combined assembly of Hopland grassland soil	Host-Associated
3300012504	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_RNA2 (Metagenome Metatranscriptome)	Environmental
3300012706	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES159 metaT (Metagenome Metatranscriptome)	Environmental
3300012708	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES113 metaT (Metagenome Metatranscriptome)	Environmental
3300012759	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES158 metaT (Metagenome Metatranscriptome)	Environmental
3300012962	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_RNA2 (Metagenome Metatranscriptome)	Environmental
3300012970	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental
3300013087	Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30L	Environmental
3300013092	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150m	Environmental
3300013132 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5m	Environmental
3300013137 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1m	Environmental
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental
3300014720 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35m	Environmental
3300016686	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES143 metaT (Metagenome Metatranscriptome)	Environmental
3300016691	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES124 metaT (Metagenome Metatranscriptome)	Environmental
3300016743	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071413AT metaT (Metagenome Metatranscriptome)	Environmental
3300017788	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20L	Environmental
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental
3300019201	Estuarine microbial communities from the Columbia River estuary - R6.10AS metaT (Metagenome Metatranscriptome)	Environmental
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental
3300020083	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300m	Environmental
3300020196	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015031 Kigoma Deep Cast 0m	Environmental
3300020220	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100m	Environmental
3300020221	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015036 Kigoma Deep Cast 100m	Environmental
3300021091	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40m	Environmental
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental
3300022176	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)	Environmental
3300024348	0.2um to 3um size fraction coassembly	Environmental
3300024480	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_0h (Metagenome Metatranscriptome)	Environmental
3300024531	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepA_8h (Metagenome Metatranscriptome)	Environmental
3300024536	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepC_8h (Metagenome Metatranscriptome)	Environmental
3300024537	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_8h (Metagenome Metatranscriptome)	Environmental
3300024543	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepA_0h (Metagenome Metatranscriptome)	Environmental
3300024549	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepC_8d (Metagenome Metatranscriptome)	Environmental
3300024559	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepB_8d (Metagenome Metatranscriptome)	Environmental
3300024562	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepC_8h (Metagenome Metatranscriptome)	Environmental
3300024569	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepB_8d (Metagenome Metatranscriptome)	Environmental
3300024572	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepB_8h (Metagenome Metatranscriptome)	Environmental
3300024573	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepA_8h (Metagenome Metatranscriptome)	Environmental
3300024852	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Yuk_RepC_8h (Metagenome Metatranscriptome)	Environmental
3300024858	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepA_8d (Metagenome Metatranscriptome)	Environmental
3300025655	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)	Environmental
3300025687	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)	Environmental
3300025732	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)	Environmental
3300026425	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepA_8h (Metagenome Metatranscriptome)	Environmental
3300026564	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepA_8d (Metagenome Metatranscriptome)	Environmental
3300026568	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepC_8d (Metagenome Metatranscriptome)	Environmental
3300027241	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02 (SPAdes)	Environmental
3300027246	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02 (SPAdes)	Environmental
3300027305	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02 (SPAdes)	Environmental
3300027571	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 (SPAdes)	Environmental
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental
3300028089	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepC_8h (Metagenome Metatranscriptome)	Environmental
3300028103	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8d	Environmental
3300028112	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepB_8h (Metagenome Metatranscriptome)	Environmental
3300028113	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepC_8h (Metagenome Metatranscriptome)	Environmental
3300028271	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepC_8h (Metagenome Metatranscriptome)	Environmental
3300028374	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Torckler E11 #897 (v2)	Environmental
3300029697	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepC_8h (Metagenome Metatranscriptome)	Environmental
3300029930	Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727	Environmental
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental
3300034063	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053	Environmental
3300034071	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110	Environmental
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental
3300034108	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157	Environmental
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental
3300034200	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190	Environmental

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
SS_2KS_010_SOILDRAFT_101963871	3300000367	Alkaline Sediment	NFDDGLLSYMQLPSDPGAVKHVYELTKEGNYQGRLGIRANLDVENVLGAVRVNLTL*
B570J29032_1091217311	3300002408	Freshwater	LSYMQLPSDPGALKTVFELTRAGSFTGKLGIRSNLDVNNVIGAFRVNLTL*
B570J29032_1099350276	3300002408	Freshwater	DPGALKTVYELTRAGTFSGKLGIRANLDVNNVIGAFRVNLTL**
B570J40625_1011127842	3300002835	Freshwater	YMLLPSDPGALKEVFELTQSGPYQGKLGIRSNLDTANVVGAIRVSLTL*
JGI25907J50239_11150931	3300003394	Freshwater Lake	LPSDPGALKTVYELTRAGTYSGKLGIRANLDVHNVIGAFRVNLTL*
Ga0007758_107151702	3300004790	Freshwater Lake	DDGLLSYMQLPSDPGALKTVFELTRSGSFSGKLGIRSNLDVHNVKGAFRVNLTL*
Ga0007756_115095522	3300004795	Freshwater Lake	LSYMQLPSDPGALKTVFEVTKAGTYQGKLGIRSNLDVTNVLGAFRVNLTL*
Ga0068882_17302101	3300005421	Freshwater Lake	MQLPSDPGALKTVYELTRSGSYSGKLGIRANLDVYNVIGAFRVNLTL*
Ga0075498_13624201	3300006378	Aqueous	LPSDPGALKTVYELTRSGTYSGKLGIRSNLDVNNVVGAFRVNLTL*
Ga0075511_17574151	3300006402	Aqueous	DDGLLSYMQLPSDPGALKTVYELTRDGDYKGKLGIRANLDVNNVVGAFRVNLTL*
Ga0075473_103963431	3300006875	Aqueous	SDPGALKTVYELTRTGTYSGKLGIRANLDVTNVIGAFRVNLTL*
Ga0070753_12108841	3300007346	Aqueous	KTVYELTRSGDYTGKLGIRANLDVNNVIGAFRVNLTL*
Ga0105044_108714692	3300007521	Freshwater	DGLLSYMQLPSDPGALKAVYELTRPGPFQGRLGIRKNLDVANVIGAFRAVLTLT*
Ga0102879_10983052	3300007549	Estuarine	TVYELTKAGPNSGKLGIRSNLDVTNVIGAFRVNLTL*
Ga0102863_10564101	3300007622	Estuarine	MQLPSDPGALKTVYELTRSGSFSGKLGIRANLDVTNVIGAFRVNLTL*
Ga0114340_10479051	3300008107	Freshwater, Plankton	KFATNFDDGLLSYMQLPSDPGALKTVFELTKSGAFQGKLGIRSNLDVTNVIGAFRVNLTL
Ga0102831_12843891	3300008996	Estuarine	VYELTKAGPNTGKLGIRSNLDVTNVIGAFRVNLTL*
Ga0102911_10480011	3300009049	Estuarine	GALKTVYELTKAGPNTGKLGIRSNLDVTNVIGAFRVNLTL*
Ga0102860_11950921	3300009056	Estuarine	SYMQLPSDPGALKTVYELTRSGSFSGKLGIRANLDVYNVIGAFRVNLTL*
Ga0105029_1157562	3300009984	Switchgrass Rhizosphere	SYMQLPSDPGALKLVYELTQSGPYQGKLGIRANLDVANVIGAVRVNLSL*
Ga0116204_11193882	3300010293	Anoxic Lake Water	GALKTVYELTRAGTFKGKLGIRANLDVNNVIGAFRVNLTL*
Ga0129333_105879942	3300010354	Freshwater To Marine Saline Gradient	DGLLSYMQLPSDPGALKTVFEITRSGTYSGKLGIRSNLDVHNVKGAFRVNLTL*
Ga0153799_10802013	3300012012	Freshwater	VFELTRSGSFSGKLGIRSNLDVTNVIGAFRVNLTL*
Ga0153805_10970892	3300012013	Surface Ice	SYMQLPSDPGALKTVYEITREGTYKNKLGIRSNLDVTNVVGAFRVNLTL*
Ga0150985_1124052022	3300012212	Avena Fatua Rhizosphere	SYMLLPSDPGALKTVYELTKWGQNTGKLGIRANLDVANVVGAMRAVLRA*
Ga0129347_11038721	3300012504	Aqueous	LKTVYELTRSGTYSGKLGIRANLDVNNVVGAFRVNLTL*
Ga0157627_10602722	3300012706	Freshwater	LPSDPGALKTVYELTRSGSFSGKLGIRSNLDVNNVIGAFRVNLTL*
Ga0157595_10111082	3300012708	Freshwater	QLPSDPGALKTVFELTRSGTFSGKLGIRSNLDVNNVIGAFRVNLTL*
Ga0157626_10553022	3300012759	Freshwater	TVFELTRSGTFSGKLGIRSNLDVNNVIGAFRVNLTL*
Ga0129335_11703381	3300012962	Aqueous	QLPTDPGARKTVYEITISGSYQGKLGIRSNLDVTNVVGAFRVNLTL*
Ga0129335_12159842	3300012962	Aqueous	SDPGALKTVFEITRSGTYSGKLGIRSNLDVHNVIGAFRVNLTL*
Ga0129338_14143412	3300012970	Aqueous	LLSYMQLPSDPGALKTVYELTRTGAYNGKLGIRANLDVDHVIGAFRVNLTL*
Ga0163212_10334313	3300013087	Freshwater	PGALKTVYEITREGTFKNKLGIRSNLDVTNVVGAFRVNLTL*
Ga0163199_12252442	3300013092	Freshwater	FDDGLLSYMQLPSDPGALKTVYELTKTGTYSGKLGIRANLDVTNVIGAFRVNLTL*
(restricted) Ga0172372_102200273	3300013132	Freshwater	ALKTVFEITRSGAFSGKLGIRSNLDVHNVIGAFRVNLTL*
(restricted) Ga0172375_108410471	3300013137	Freshwater	DPGALKTVFELTRAGTFKGKLGIRSNLDVHNVVGAFRVNLTL*
Ga0177922_111627231	3300013372	Freshwater	VFELTRSGTFSGKLGIRSNLDVNNVIGAFRVNLTL*
(restricted) Ga0172376_101643003	3300014720	Freshwater	VFEITRSGAFSGKLGIRSNLDVHNVIGAFRVNLTL*
(restricted) Ga0172376_107442862	3300014720	Freshwater	PSDPGALKTVYELTRAGTFSGKLGIRANLDVNNVIGAFRVNLTL*
Ga0180056_10132872	3300016686	Freshwater	LPSDPGALKTVFELTRSGTYSGKLGIRSNLDVTNVIGAFRVNLTL
Ga0180055_10690952	3300016691	Freshwater	PSDPGALKTVYELTRSGSFSGKLGIRSNLDVTNVVGAFRVNLTL
Ga0182083_14091292	3300016743	Salt Marsh	DDGLLSYMQLPSDPGALKTVYELTRDGDYKGKLGIRANLDVNNVVGAFRVNLTL
Ga0169931_102651152	3300017788	Freshwater	GLLSYMQLPSDPGALKTVYEITREGTFKNKLGIRSNLDVTNVVGAFRVNLTL
Ga0169931_109930342	3300017788	Freshwater	PSDPGALKTVYELTRSGSFNGKLGIRANLDVYNVIGAFRVNLTL
Ga0181591_102471802	3300018424	Salt Marsh	SDPGALADVYELTKSGPNQGKLGIRSNLDVADVVGAFRVLLTL
Ga0180032_11316771	3300019201	Estuarine	LPSDPGALKTVYELTRAGTYSGKLGIRANLDVHNVIGAFRVNLTL
Ga0180116_13544512	3300019229	Groundwater Sediment	EKFATNFDDGLLSYMQLPSDPGALKEVYSLTKPGTYNGKLGIRANLNVANVTGAIRVALT
Ga0194113_102745762	3300020074	Freshwater Lake	GALKTVYEITREGTFKNKLGIRSNLDVTNVVGAFRVNLTL
Ga0194111_101329151	3300020083	Freshwater Lake	QLPSDPGALKTVFELTRAGTFKGKLGIRSNLDVHNVVGAFRVNLTL
Ga0194111_103298132	3300020083	Freshwater Lake	PGALKTVFEITRSGTFSGKLGIRSNLDVHNVKGAFRVNLTL
Ga0194124_100632311	3300020196	Freshwater Lake	LSYMQLPSDPGALKTVYEITREGTFKNKLGIRSNLDVTNVVGAFRVNLTL
Ga0194119_104858552	3300020220	Freshwater Lake	DGLLSYMQLPSDPGALKTVFELTRSGAFSGKLGIRSNLDVHNVIGAFRVNLTL
Ga0194127_103060132	3300020221	Freshwater Lake	QLPSDPGALKTVYEITREGTFKNKLGIRSNLDVTNVVGAFRVNLTL
Ga0194133_100651546	3300021091	Freshwater Lake	GLLSYMQLPSDPGALKTVFELTRAGTFKGKLGIRSNLDVHNVIGAFRVNLTL
Ga0222712_100682941	3300021963	Estuarine Water	SDPGALKTVFEVTRTGTYQGKLGIRSNLDVTNVLGAFRVNLTL
Ga0212031_10447392	3300022176	Aqueous	SMQLPSDPGALKTVFELTRSGAYSGKLGIRANLDVNNVIGAFRVNLTL
Ga0244776_102816602	3300024348	Estuarine	LLSYMQLPSDPGALKTVYELTRSGTYSGKLGIRANLDVTNVIGAFRVNLTL
Ga0255223_11007642	3300024480	Freshwater	QLPSDPGALKTVYELTRSGSFSGKLGIRSNLDVNNVIGAFRVNLTL
Ga0255228_10502372	3300024531	Freshwater	LLSYMQLPSDPGALKTVFEVTKAGTYQGKLGIPSNLDVTNVLGAFRVNLTL
Ga0256338_10432121	3300024536	Freshwater	DPGALKTVFELTKSGTYQGKLGIRANLDVTNVIGAFRVSLSM
Ga0256338_11344911	3300024536	Freshwater	MQLPSDPGALKTVFEITRTGTYSGKLGIRSNLDVTNVLGAFRVNLTL
Ga0255225_10526721	3300024537	Freshwater	GALKTVYELTRAGTYSGKLGIRANLDVHNVIGAFRVNLTL
Ga0255225_10943992	3300024537	Freshwater	SYMQLPSDPGALKTVYELTRSGSFSGKLGIRSNLDVNNVIGAFRVNLTL
Ga0255225_10945942	3300024537	Freshwater	ALKTVFELTRSGTFSGKLGIRSNLDVNNVIGAFRVNLTL
Ga0256348_10143431	3300024543	Freshwater	SDPGALKTVYELTRSGAYSGKLGIRSNLDVNNVIGAFRVNLTL
Ga0256308_10249002	3300024549	Freshwater	DGLLSYMQLPSDPGALKTVYELTRSGSFSGKLGIRSNLDVNNVIGAFRVNLTL
Ga0255284_11146791	3300024559	Freshwater	LLSYMQLPSDPGALKTVYELTKAGPNNGKLGIRSNLDVTNVIGAFRVNLTL
Ga0256336_10838992	3300024562	Freshwater	SYMQLPSDPGALKEVYELTKTGPYQGKLGIRSNLDTANVVGAIRVSLTL
Ga0255243_10392761	3300024569	Freshwater	SYMQLPSDPGALKTVYELTRAGTYSGKLGIRANLDVHNVIGAFRVNLTL
Ga0255268_10353292	3300024572	Freshwater	KTVFEITRTATYSGKLGIRSNLDVTNVLGAFRVNLTL
Ga0256337_10419522	3300024573	Freshwater	VYELTREGSYKGKLGIRSNLDVTNVVGAFRVNLTL
Ga0256337_10827221	3300024573	Freshwater	LKTVYELTRSGTYSGKLGIRSNLDVNNVVGAFRVNLTL
Ga0255295_10224982	3300024852	Freshwater	SDPGALKTVFELTRSGTYSGKLGIRSNLDVHNVIGAFRVNLTL
Ga0255295_11208452	3300024852	Freshwater	QLPSDPGALKTVYELTRSGSYSVKLGIRANLDVYNVIGAFRVNLTL
Ga0255286_10941031	3300024858	Freshwater	VFELTRSGTYSGKLGIRANLDVTNVIGAFRVNLTL
Ga0208795_10783321	3300025655	Aqueous	KTVYELTRSGSYSGKLGIRSNLDVHNVIGAFRVNLTL
Ga0208019_10814222	3300025687	Aqueous	GALKTVYELTRNGTYSGKLGIRANLDVDNVVGAFRVNLTL
Ga0208784_12267422	3300025732	Aqueous	SDPGALKTVYELTRTGTYSGKLGIRANLDVTNVIGAFRVNLTL
Ga0256300_10091771	3300026425	Freshwater	NFDDGLLSYMQLPSDPGALKTVYELTKAGPNNGKLGIRSNLDVTNVIGAFRVNLTL
Ga0256359_10306382	3300026564	Freshwater	KTVYELTRSGAYSGKLGIRSNLDVNNVIGAFRVNLTL
Ga0255240_10331232	3300026568	Freshwater	KTVYELTRSGSFSGKLGIRSNLDVNNVIGAFRVNLTL
Ga0255240_11313842	3300026568	Freshwater	LSYMQLPSDPGALKTVYELTKAGPNNGKLGIRSNLDVTNVIGAFRVNLTL
Ga0208805_10888212	3300027241	Estuarine	LPSDPGALKTVYELTKAGPNTGKLGIRSNLDVTNVIGAFRVNLTL
Ga0208931_10261271	3300027246	Estuarine	FDDGLLSYMQLPSDPGALKTVYELTKAGPNTGKLGIRSNLDVTNVIGAFRVNLTL
Ga0208168_10464872	3300027305	Estuarine	DPGALKTVYELTKAGPNTGKLGIRSNLDVTNVIGAFRVNLTL
Ga0208897_11069731	3300027571	Estuarine	YMQLPSDPGALKTVYELTRSGSFSGKLGIRSNLDVNNVIGAFRVNLTL
Ga0208974_10595931	3300027608	Freshwater Lentic	EKFATNFDDGLLSYMQLPSDPGALKTVFEVTKAGTYQGKLGIRSNLDVTNVLGAFRVNLT
Ga0209296_11879362	3300027759	Freshwater Lake	GLLSYMQLPSDPGALKTVYELTRSGSFSGKLGIRSNLDVNNVIGAFRVNLTL
Ga0209500_103918952	3300027782	Freshwater Lake	PSDPGALKTVFELTRSGSFSGKLGIRSNLDVTNVIGAFRVNLTI
Ga0247723_11282802	3300028025	Deep Subsurface Sediment	LSYMQLPSDPGALKTVYELTRAGTYSGKLGIRANLDVHNVIGAFRVNLTL
Ga0255299_10244122	3300028089	Freshwater	LLSYMQLPSDPGALKTVYEITREGTYKNKLGIRSNLDVTNVVGAFRVNLTL
Ga0255172_10447521	3300028103	Freshwater	KTVFELTRSGTYSGKLGIRSNLDVHNVIGAFRVNLTL
Ga0256335_11633721	3300028112	Freshwater	TNFDDGLLSYMQQPSDPGALKTVFELTRSGTYSGKLGIRANLDVTNVIGAFRVNLTL
Ga0255234_11389951	3300028113	Freshwater	SDPGALKTVYELTRSGAFSGKLGIRSNLDVTNVIGAFRVNLTL
Ga0255256_11014272	3300028271	Freshwater	DDGLLSYMQLPSDPGALKTVFELTRSGSFSGKLGIRSNLDVHNVKGAFRVNLTL
Ga0306906_10514261	3300028374	Saline Lake	DGLLSYMQLPSDPGAVKEVYSITEAGTYQGKLGIRANLDKANVVGAFRVNLTL
Ga0256301_10154221	3300029697	Freshwater	DPGALKTVFEITRSGSFSGKLGIRSNLDVHNVIGAFRVNLTL
Ga0119944_10428391	3300029930	Aquatic	GALKTVFEVTRTGTYQGKLGIRSNLDVTNVLGAFRVNLTL
Ga0315909_101950353	3300031857	Freshwater	MQLPSDPGALKTVYELTRSGSFSGKLGIRANLDVTNVVGAFRVNLTL
Ga0315909_103165771	3300031857	Freshwater	SYMQLPSDPGALKTVFELTRSGTYSGKLGIRANLDVNNVIGAFRVNLTL
Ga0315909_106145592	3300031857	Freshwater	KEVYELTKTGPYSGKLGIRSNLDTANVVGAIRVSLTL
Ga0335003_0089292_1487_1606	3300033995	Freshwater	ALKTVYELTRSGSFSGKLGIRANLDVTNVIGAFRVNLTL
Ga0335000_0004656_2_181	3300034063	Freshwater	FATNFDDGLLSYMQLPSDPGALKTVFELTRAGSFTGKLGIRSNLDVNNVIGAFRVNLTL
Ga0335028_0095097_1821_1958	3300034071	Freshwater	LPSDPGALKTVYELTRSGSFSGKLGIRANLDVTNVIGAFRVNLTL
Ga0335012_0097643_1_108	3300034093	Freshwater	VYELTRSGSFSGKLGIRSNLDVTNVVGAFRVNLTL
Ga0335022_0425367_3_125	3300034095	Freshwater	GALKTVYELTRSGSFSGKLGIRANLDVTNVIGAFRVNLTL
Ga0335030_0352050_3_161	3300034103	Freshwater	GLLSYMQLPSDPGALKTVYELTRSGTYNGKLGIRANLDVDHVIGAFRVNLTL
Ga0335036_0577734_1_135	3300034106	Freshwater	PSDPGALKTVFEVTKAGTYQGKLGIRSNLDVTNVLGAFRVNLTL
Ga0335050_0248200_1_126	3300034108	Freshwater	PGALKTVYELTRSGSFSGKLGIRSNLDVTNVVGAFRVNLTL
Ga0335058_0450429_2_121	3300034121	Freshwater	ALKTVFELTRSGAYSGKLGIRSNLDVTNVIGAFRVNLTL
Ga0335065_0742170_448_555	3300034200	Freshwater	VFELTRSGSFSGKLGIRSNLDVHNVKGAFRVNLTL