NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F085723

Metagenome Family F085723

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F085723
Family Type Metagenome
Number of Sequences 111
Average Sequence Length 58 residues
Representative Sequence MLTKLKFNLLHPTLNAMQQQAAYQLSEIEGWHVEGKTAFKDGLTLHLLENGNALTSPTRLSTK
Number of Associated Samples 69
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 16.22 %
% of genes near scaffold ends (potentially truncated) 27.93 %
% of genes from short scaffolds (< 2000 bps) 84.68 %
Associated GOLD sequencing projects 57
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (79.279 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine
(22.523 % of family members)
Environment Ontology (ENVO) Unclassified
(75.676 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(77.477 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 25.40%    β-sheet: 9.52%    Coil/Unstructured: 65.08%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF04404ERF 3.60
PF08299Bac_DnaA_C 3.60
PF11325DUF3127 1.80
PF13392HNH_3 0.90
PF05497Destabilase 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 3.60


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A79.28 %
All OrganismsrootAll Organisms20.72 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2040502003|LanddsortDeep80_GCH9ZVC01BE8PQNot Available523Open in IMG/M
3300000115|DelMOSum2011_c10096307Not Available982Open in IMG/M
3300000115|DelMOSum2011_c10141511Not Available725Open in IMG/M
3300000115|DelMOSum2011_c10201369Not Available554Open in IMG/M
3300000115|DelMOSum2011_c10205764Not Available545Open in IMG/M
3300000115|DelMOSum2011_c10225920Not Available509Open in IMG/M
3300000115|DelMOSum2011_c10226197Not Available508Open in IMG/M
3300000116|DelMOSpr2010_c10062805All Organisms → Viruses → Predicted Viral1551Open in IMG/M
3300000116|DelMOSpr2010_c10076311Not Available1343Open in IMG/M
3300000116|DelMOSpr2010_c10084788Not Available1242Open in IMG/M
3300000116|DelMOSpr2010_c10144691Not Available822Open in IMG/M
3300000116|DelMOSpr2010_c10154120Not Available783Open in IMG/M
3300000116|DelMOSpr2010_c10205555Not Available628Open in IMG/M
3300000116|DelMOSpr2010_c10212854Not Available611Open in IMG/M
3300000117|DelMOWin2010_c10011000All Organisms → cellular organisms → Bacteria5107Open in IMG/M
3300000124|BS_KBA_SWE12_21mDRAFT_c10032166All Organisms → Viruses → Predicted Viral1524Open in IMG/M
3300000124|BS_KBA_SWE12_21mDRAFT_c10142609All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae576Open in IMG/M
3300001347|JGI20156J14371_10002958Not Available12971Open in IMG/M
3300001347|JGI20156J14371_10174520Not Available576Open in IMG/M
3300005589|Ga0070729_10631960Not Available578Open in IMG/M
3300005600|Ga0070726_10422565Not Available672Open in IMG/M
3300005609|Ga0070724_10419744Not Available593Open in IMG/M
3300005920|Ga0070725_10175519Not Available929Open in IMG/M
3300006029|Ga0075466_1027341Not Available1801Open in IMG/M
3300006029|Ga0075466_1055449All Organisms → Viruses → Predicted Viral1157Open in IMG/M
3300006029|Ga0075466_1183100Not Available525Open in IMG/M
3300006467|Ga0099972_12510799Not Available974Open in IMG/M
3300006803|Ga0075467_10099584Not Available1731Open in IMG/M
3300006803|Ga0075467_10467626Not Available651Open in IMG/M
3300006920|Ga0070748_1031815Not Available2163Open in IMG/M
3300006920|Ga0070748_1255668Not Available629Open in IMG/M
3300007276|Ga0070747_1091368Not Available1128Open in IMG/M
3300007276|Ga0070747_1141426Not Available869Open in IMG/M
3300007540|Ga0099847_1179413Not Available622Open in IMG/M
3300009074|Ga0115549_1236094Not Available580Open in IMG/M
3300009426|Ga0115547_1069272All Organisms → Viruses → Predicted Viral1203Open in IMG/M
3300009432|Ga0115005_10759001Not Available780Open in IMG/M
3300009434|Ga0115562_1063232Not Available1583Open in IMG/M
3300009434|Ga0115562_1133873Not Available940Open in IMG/M
3300009434|Ga0115562_1309865Not Available539Open in IMG/M
3300009435|Ga0115546_1093075Not Available1102Open in IMG/M
3300009436|Ga0115008_10122540Not Available1912Open in IMG/M
3300009436|Ga0115008_10155596Not Available1660Open in IMG/M
3300009442|Ga0115563_1217215Not Available726Open in IMG/M
3300009443|Ga0115557_1000436Not Available28767Open in IMG/M
3300009467|Ga0115565_10540263Not Available522Open in IMG/M
3300009495|Ga0115571_1046976All Organisms → Viruses → Predicted Viral2016Open in IMG/M
3300009507|Ga0115572_10403246Not Available765Open in IMG/M
3300009507|Ga0115572_10440500Not Available726Open in IMG/M
3300009507|Ga0115572_10550334Not Available637Open in IMG/M
3300009508|Ga0115567_10867443Not Available536Open in IMG/M
3300010392|Ga0118731_115196526All Organisms → Viruses → Predicted Viral1085Open in IMG/M
3300017719|Ga0181390_1131265Not Available646Open in IMG/M
3300017742|Ga0181399_1023748Not Available1697Open in IMG/M
3300018413|Ga0181560_10221248Not Available912Open in IMG/M
3300020165|Ga0206125_10087485Not Available1354Open in IMG/M
3300020169|Ga0206127_1261572Not Available593Open in IMG/M
3300020176|Ga0181556_1194074Not Available782Open in IMG/M
3300020187|Ga0206130_10067987Not Available2337Open in IMG/M
3300020187|Ga0206130_10121753Not Available1454Open in IMG/M
3300021375|Ga0213869_10402551Not Available560Open in IMG/M
3300021389|Ga0213868_10024387All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4628Open in IMG/M
3300021389|Ga0213868_10615990Not Available565Open in IMG/M
3300021957|Ga0222717_10009308All Organisms → cellular organisms → Bacteria6893Open in IMG/M
3300021957|Ga0222717_10090851Not Available1918Open in IMG/M
3300021957|Ga0222717_10167611All Organisms → Viruses → Predicted Viral1324Open in IMG/M
3300021957|Ga0222717_10259770All Organisms → Viruses → Predicted Viral1005Open in IMG/M
3300021957|Ga0222717_10280217Not Available958Open in IMG/M
3300021957|Ga0222717_10463644Not Available688Open in IMG/M
3300021957|Ga0222717_10547600Not Available615Open in IMG/M
3300022061|Ga0212023_1002546Not Available1957Open in IMG/M
3300022061|Ga0212023_1064831Not Available506Open in IMG/M
3300022072|Ga0196889_1031074Not Available1081Open in IMG/M
3300022072|Ga0196889_1036372Not Available983Open in IMG/M
3300022164|Ga0212022_1066071Not Available556Open in IMG/M
3300022178|Ga0196887_1035183All Organisms → Viruses → Predicted Viral1364Open in IMG/M
(restricted) 3300022913|Ga0233404_10039194All Organisms → Viruses → Predicted Viral1079Open in IMG/M
(restricted) 3300023210|Ga0233412_10463206Not Available571Open in IMG/M
(restricted) 3300023210|Ga0233412_10603290Not Available500Open in IMG/M
(restricted) 3300023271|Ga0233403_10094161Not Available894Open in IMG/M
(restricted) 3300023276|Ga0233410_10197261Not Available645Open in IMG/M
(restricted) 3300024059|Ga0255040_10031941Not Available1872Open in IMG/M
(restricted) 3300024059|Ga0255040_10123265Not Available1026Open in IMG/M
3300024346|Ga0244775_11091297Not Available626Open in IMG/M
(restricted) 3300024517|Ga0255049_10506639Not Available560Open in IMG/M
(restricted) 3300024518|Ga0255048_10358691Not Available706Open in IMG/M
(restricted) 3300024520|Ga0255047_10324163Not Available779Open in IMG/M
(restricted) 3300024520|Ga0255047_10334336Not Available765Open in IMG/M
3300025508|Ga0208148_1020996All Organisms → Viruses → Predicted Viral1853Open in IMG/M
3300025577|Ga0209304_1080239Not Available779Open in IMG/M
3300025590|Ga0209195_1021911Not Available1965Open in IMG/M
3300025620|Ga0209405_1013653All Organisms → Viruses → Predicted Viral3698Open in IMG/M
3300025620|Ga0209405_1055884All Organisms → Viruses → Predicted Viral1315Open in IMG/M
3300025637|Ga0209197_1000571Not Available25801Open in IMG/M
3300025637|Ga0209197_1010341All Organisms → Viruses → Predicted Viral4254Open in IMG/M
3300025641|Ga0209833_1001452Not Available15739Open in IMG/M
3300025645|Ga0208643_1116955Not Available712Open in IMG/M
3300025652|Ga0208134_1015113All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Tabrizicola3043Open in IMG/M
3300025849|Ga0209603_1055914Not Available2026Open in IMG/M
3300025849|Ga0209603_1170825Not Available861Open in IMG/M
3300025849|Ga0209603_1185503Not Available809Open in IMG/M
3300025869|Ga0209308_10332199Not Available625Open in IMG/M
3300025894|Ga0209335_10226805Not Available839Open in IMG/M
3300027833|Ga0209092_10103611Not Available1685Open in IMG/M
(restricted) 3300027861|Ga0233415_10032186All Organisms → Viruses → Predicted Viral2130Open in IMG/M
3300027978|Ga0209165_10072010Not Available1222Open in IMG/M
(restricted) 3300027996|Ga0233413_10021936All Organisms → Viruses → Predicted Viral2384Open in IMG/M
(restricted) 3300028045|Ga0233414_10014406All Organisms → Viruses → Predicted Viral3057Open in IMG/M
(restricted) 3300028045|Ga0233414_10271152Not Available773Open in IMG/M
(restricted) 3300028045|Ga0233414_10341246Not Available691Open in IMG/M
3300028599|Ga0265309_10098716All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1725Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine22.52%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous17.12%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater12.61%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine12.61%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water6.31%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine4.50%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment4.50%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater3.60%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.60%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater2.70%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine2.70%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine1.80%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh1.80%
MarineEnvironmental → Aquatic → Marine → Wetlands → Sediment → Marine1.80%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.90%
SedimentEnvironmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment0.90%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
204050200380 m water depthEnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000124Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBA sample SWE 12_21mEnvironmentalOpen in IMG/M
3300001347Pelagic Microbial community sample from North Sea - COGITO 998_met_06EnvironmentalOpen in IMG/M
3300005589Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.2EnvironmentalOpen in IMG/M
3300005600Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1EnvironmentalOpen in IMG/M
3300005609Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.1EnvironmentalOpen in IMG/M
3300005920Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.2EnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006467Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935EnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009426Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420EnvironmentalOpen in IMG/M
3300009432Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M MetagenomeEnvironmentalOpen in IMG/M
3300009434Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516EnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300009442Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519EnvironmentalOpen in IMG/M
3300009443Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421EnvironmentalOpen in IMG/M
3300009467Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530EnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300018413Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020169Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1EnvironmentalOpen in IMG/M
3300020176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011505AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300022061Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022164Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300022913 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_2_MGEnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300023271 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_1_MGEnvironmentalOpen in IMG/M
3300023276 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_1_MGEnvironmentalOpen in IMG/M
3300024059 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2EnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300024517 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025508Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025577Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 (SPAdes)EnvironmentalOpen in IMG/M
3300025590Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 (SPAdes)EnvironmentalOpen in IMG/M
3300025620Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516 (SPAdes)EnvironmentalOpen in IMG/M
3300025637Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 (SPAdes)EnvironmentalOpen in IMG/M
3300025641Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025849Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)EnvironmentalOpen in IMG/M
3300025869Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)EnvironmentalOpen in IMG/M
3300025894Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)EnvironmentalOpen in IMG/M
3300027833Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300027978Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1 (SPAdes)EnvironmentalOpen in IMG/M
3300027996 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_6_MGEnvironmentalOpen in IMG/M
3300028045 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_10_MGEnvironmentalOpen in IMG/M
3300028599Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160524 (Illumina Assembly)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
80m_15049302040502003MarineMLTKIKFKTLHHTLNAMQLQAAYQLSEIDGWHIEG
DelMOSum2011_1009630733300000115MarineMLTKIKFNLLHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALCKPLGGF*
DelMOSum2011_1014151113300000115MarineMLTKIXFNLIHPTLNAMQQQAAYQLSEIEGWXVEGKTAFKDGLTLYLHENGNALCKPQGGF*
DelMOSum2011_1020136923300000115MarineMLTKIKFNLLHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLHENGNALCKPLGGF*
DelMOSum2011_1020576423300000115MarineMLTKLKFNPLHPTLNAMQLRAAYQLSEIEGWDVEGKTAFKDGLTLHLHENGNALTSPTRLSAK*
DelMOSum2011_1022592023300000115MarineMLTKLKFNLLHPTLNAMQLQAAYQLSEIEGWDIEGKTAFKDGLTLHLHENGNALCKPQGGF*
DelMOSum2011_1022619723300000115MarineVYRRITNTLTNKKMLTKINFNLLHPTLNAMQQQAAYQLSELDGWHVEGKTAFKDGLTLHLLENGNALQSPVKLSAK*
DelMOSpr2010_1006280553300000116MarineMLTKINFNLLHPTLNAMQQQAAYQLSELDGWHVEGKTAFKDGLTLHLLENGNALTSPTRLSTK*
DelMOSpr2010_1007631143300000116MarineMLTKLKFNPLHPTLNAMQLQAAYQLSEIEGWHVEGKTAFKDGLTLHLLENGNALTSPTRLSTK*
DelMOSpr2010_1008478833300000116MarineMKTRIQFNPLHPTLNAMQLQAAYQLSEIEGWDIEGKTAFKDGLTLHLLENGNALTSPTRLSTK*
DelMOSpr2010_1014469123300000116MarineMLTKIKFNLIHPTLNAMQQQAAYQLSEIEGWDIEGKTAFKDGLTLHLLENGNALTSPTRLSTK*
DelMOSpr2010_1015412023300000116MarineMLTKLXFNLIHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALTSPSRLPTK*
DelMOSpr2010_1020555533300000116MarineMLTKIKFNLIHPTLNAMQQQAAYQLSEIEGWHVEGKTAFKDG
DelMOSpr2010_1021285433300000116MarineCCAVYRRITNPLTTNKMLTKLKFNLLHPTLNAMQQQAAYQLSEIEGWHVEGKTAFKDGLTLHLLENGNALTGSPTRLSTK*
DelMOWin2010_1001100053300000117MarineLRYLTQTNKKMLTKLKFNPLHPTLNAMQLQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALTGSPARLSTK*
BS_KBA_SWE12_21mDRAFT_1003216633300000124MarineMLTKIKFKTLHPTLNAMQLQAAYQLSEIDGWHIEGKTALKDGLTLYLHENGNSLCKPLHGLLVIN*
BS_KBA_SWE12_21mDRAFT_1014260913300000124MarineMLTKIKFKTLHPTLNVMQLQAAYQLSEIDGWHIEGKTALKDGLTLYLHENGNSLCKPLHGLLVIN*
JGI20156J14371_10002958153300001347Pelagic MarineMITKIKFNLLHPTLNAMQQQAAYQLSEIEGWDVEGKKAFKDGLTIHLHENGNALCKPSRRLHGFN*
JGI20156J14371_1017452023300001347Pelagic MarineMLTRIKFNLLHPTLNAMQQQAAYQLSEVEGWDVEGKTAFKDGLTLHLHENGNALTSPTRL
Ga0070729_1063196013300005589Marine SedimentMQTKIKFKDQHPTLNAMQLQAAYQLSEIDGWHVSGKTAYKEGVTL
Ga0070726_1042256523300005600Marine SedimentMKTKLKFNLIHPTLNAMQLQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALQSPTLLSTK*
Ga0070724_1041974433300005609Marine SedimentMTSKIKFSAQHPTLNAMQLQAAYQLSEIDGWHVNGKTAYKEGVTLQLLENGNA
Ga0070725_1017551913300005920Marine SedimentMTSKIKFSAQHPTLNAMQLQAAYQLSEIDGWHVSGKTAYKEGVTLQLLENGNALK*
Ga0075466_102734153300006029AqueousMLTKLKFNPLHPTLNAMQLRAAYQLSEIEGWHVEGKTAFKDGLTLHLLWNGNALTSPTRLSTK*
Ga0075466_105544923300006029AqueousMLTKLKFNLIHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALCKPQGGF*
Ga0075466_118310013300006029AqueousMLTKIKFNLLHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALCGPLGGL*
Ga0099972_1251079933300006467MarineMQTKIKFKDQHPTLNAMQLQAAYQLSEIDGWHVSGKTAYKEGVTLQLLENGNALK*
Ga0075467_1009958463300006803AqueousMLTKLKFNLIHPTLNAMQQQAAYQLSEIEGWHVEGKTAFKDGLTLHLLENGNALTSPTRLSTK*
Ga0075467_1046762623300006803AqueousMLTKLKFNPLHPTLNAMQLQAAYQLSEIEGWHVEGKTAFKDGLTLHLLWNGNALTSPTRLSTK*
Ga0070748_103181543300006920AqueousMLTKLKFNPLHPTLNAMQLQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALTGSPARLSTK*
Ga0070748_125566813300006920AqueousPLTTKKMLTKLKFNLIHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLHENGNALTSPTRLPTK*
Ga0070747_109136833300007276AqueousMLTKIKFNLLHPTLNAMQQQAAYQLSEIEGWHVEGKTAFKDGLTLHLLWNGNALTSPTRLSTK*
Ga0070747_114142623300007276AqueousMLTKTKFNLIHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALTSPTRLSTK*
Ga0099847_117941313300007540AqueousTRIKFKAQHPTLNAMQLQAAYQLSEIDGWHVEGKTASKEGVTLQLLENGNALK*
Ga0115549_123609413300009074Pelagic MarineMLTKIKFNLLHPTLNAMQQQAAYQLSEIEGWHVEGKTAFKDGLTLHLLENGNALTSPTRLPTK*
Ga0115547_106927223300009426Pelagic MarineMLTKIKFNLLHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALTSPTRLSTK*
Ga0115005_1075900123300009432MarineMLTKIKFSAKHPTLNAMQLQAAYQLSEIDGWHVNGKTAYKKGVTLQLLENGNALK*
Ga0115562_106323243300009434Pelagic MarineMKTKAKFNPLYPTLNAMQLQVAYQLSEIEGFHVEGKTAHKGGLMLHLHENG
Ga0115562_113387313300009434Pelagic MarinePTLNAMQLQVAYQLSEIEGFHVEGKTAHKGGLMLHLHENGNALTYPEKCAE*
Ga0115562_130986523300009434Pelagic MarineMKTKAKFNPLHPTLNAMQLQVAYQLSEIEGFHVEGKTAHKGGLMLHLHENG
Ga0115546_109307513300009435Pelagic MarineMLTKIKFNLLHPTLNAMQQQAAYQLSEIEGWHVEGKTAFKDGLTLYLHENGNALCKPLGGF*
Ga0115008_1012254033300009436MarineMLTRIKFSAQHPTLNAMQLQAAYQLSEIDGWHVNGKTAYKEGVTLQLLENGNALK*
Ga0115008_1015559633300009436MarineMLTKIKFSAQHPTLNAMQLQSAYQLSEIDGWHVNGKTAYKEGVTLQLLENGNALK*
Ga0115563_121721513300009442Pelagic MarineMKTKAKFNPLHPTLNAMQLQVAYQLSEIEGFHVEGKTAHKGGLMLHLHENGNALTYPEKCAE*
Ga0115557_1000436333300009443Pelagic MarineMITKIKFNLLHPTLNAMQQQAAYQLSETEGWDVEGKKAFKDGLTIHLHENGNALCKPSRRLHGFN*
Ga0115565_1054026333300009467Pelagic MarineLLHPTLNAMQQQAAYQLSEVEGWDVEGKTAFKDGLTLHLHENGNALCKPSSRLHGFDQ*
Ga0115571_104697613300009495Pelagic MarineLKFNPLHPTLNAMQLQAAYQLSEIEGWHVEGKTAFKDGLTLYLHENGNALCKPQGGFQL*
Ga0115572_1040324623300009507Pelagic MarineMLTKIKFNLLHPTLNAMQQQAAYQLSEIEGWHVEGKTAFKDGLTLYLHENGNALCKPQGGFQL*
Ga0115572_1044050013300009507Pelagic MarineKIKFNLLHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALTSPTRLSTK
Ga0115572_1055033423300009507Pelagic MarineMLTRIKFNLLHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLHENGNALCKPSSRLHGFDQ*
Ga0115567_1086744313300009508Pelagic MarineMLTKLKFNPLHPTLNAMQLRAAYQLSEIEGWDVEGKTAF
Ga0118731_11519652623300010392MarineMLTKLKFNLLHPTLNAMQQQAAYQLSEIEGWHVEGKTAFKDGLTLHLLENGNALTSPTRLSTK*
Ga0181390_113126523300017719SeawaterMHQTLNAMQLQAAYQLSEIEGFDVVGKTATKDGLNLYLHENGNALTYPDKCAA
Ga0181399_102374853300017742SeawaterMKTEEAFKSLHPTLNPMQLRAAYQLSEIDGWHVEGKTASKDGMTLRLLENGNALK
Ga0181560_1022124843300018413Salt MarshMLTKLKFNSLHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALCKPPEG
Ga0206125_1008748543300020165SeawaterMLTRIKFNLLHPTLNAMQQQTAYQLSEVEGWDVEGKTAFKDGLTLHLHENGNALCKPPEGFNQ
Ga0206127_126157223300020169SeawaterMKTRQAFDPLHPTLNTMQLQAAYHLSEIDGWDVEGKEAYKDGLTLHLLENGNALTKSPHSPVTGFAV
Ga0181556_119407443300020176Salt MarshMLTKLKFNSLHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALCKPPEGFDQ
Ga0206130_1006798743300020187SeawaterMLTKLKFNPLHPTLNAMQLQAAYQLSEVEGWDVEGKTAFKDGLTLHLHENGNALCKPPEGFNQ
Ga0206130_1012175333300020187SeawaterMLTKIKFKDQHPTLNAMQLQAAYQLSEIDGWHVEGKTASKEGVTLQLLENGNAIK
Ga0213869_1040255113300021375SeawaterMLTKLKFNPLHPTLNAMQLQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALCKPPEG
Ga0213868_1002438733300021389SeawaterMLTKLKFNPLHPTLNAMQLQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALCKPPEGFDQ
Ga0213868_1061599013300021389SeawaterMLTKLKFNQLHPTLNAMQLQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALTGSPTRPSTK
Ga0222717_1000930893300021957Estuarine WaterMKSRIKFNLLHPTLNAMQQQAAYHLSELEGWHVEGKTAFKDGLTLHLLENGNALTSPTRLSTK
Ga0222717_1009085133300021957Estuarine WaterMKTKEAFKSLHPTLNPMQLQAAYQLSEIDGWHVEGKTASKDGMTLQLLENGNALK
Ga0222717_1016761143300021957Estuarine WaterMKTKEAFESLHTTLNPMQLQAAYQLSEIDGWHVEGKTASKDGMTLQLLENGNALK
Ga0222717_1025977023300021957Estuarine WaterMLSKVKFNLLHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALTGSPTRLSTK
Ga0222717_1028021723300021957Estuarine WaterMKTKEAFKSLHPTLNAMQLQSAYQLSEIEGWHVEGKTASKDGMTLQLLENGNALK
Ga0222717_1046364413300021957Estuarine WaterMKSKIKFNLLHPTLNAMQRQAAYQLSEIDGWHVEGKTAFKDGLTLHLLENGNALTGSPTRLSTK
Ga0222717_1054760013300021957Estuarine WaterMKTKEAFKSLHPTLNPMQLQSAYQLSEIDGWHVEGKTASKDGMTLQLLENGNALK
Ga0212023_100254623300022061AqueousMLTKLKFNLIHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALCKPQGG
Ga0212023_106483133300022061AqueousMLTKLKFNLIHPTLNAMQQQAAYQLSEIEGWHVEGKTAFKDGL
Ga0196889_103107433300022072AqueousMLTKIKFNLLHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALCGPLGG
Ga0196889_103637233300022072AqueousMLTKLKFNLIHPTLNAMQQQAAYQLSEIEGWHVEGKTAFKDGLTLHLLENGNALTSPTRLSTK
Ga0212022_106607113300022164AqueousMLTKIKFNLLHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALTSPTRLSTK
Ga0196887_103518323300022178AqueousMLTKLKFNLIHPTLNAMQQQAAYQLSEIEGWEVEGKTAFKDGLTLHLHENGNALCKPQGG
(restricted) Ga0233404_1003919433300022913SeawaterMKTKEAFKSLHPTLNAMQLQSAYQLSEIDGWHVEGKTASKDGITLQLLENGNALK
(restricted) Ga0233412_1046320613300023210SeawaterMKTKEAFKSLHPTLNAMQLQSAYQLSEIDGWHVEGKTASKDGITLQLLDNGNALK
(restricted) Ga0233412_1060329013300023210SeawaterMKTKEAFKSLHPTLNPMQLQAAYQLSEIDGWHVEGKTASKEGMTLQLLENGNALK
(restricted) Ga0233403_1009416133300023271SeawaterMKTKEAFKSLHPTLNPMQLQSAYQLSEIDGWHVEGKTASKDGMTLQLLKNGNALK
(restricted) Ga0233410_1019726113300023276SeawaterMKTKEAFKSLHPTLNPMQLQSAYQLSEIDGWHVEGKTASK
(restricted) Ga0255040_1003194133300024059SeawaterMLSKIRFNLLHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALTSPTRLSTK
(restricted) Ga0255040_1012326523300024059SeawaterMLTKIKFKAQHPTLNAMQIQAAYQLSEIDGWHVEGKTASKEGVTLQLLENGNALK
Ga0244775_1109129733300024346EstuarineMLSKVKFNLLHPTLNAMQRQAAYQLSEIDGWDVEGKTAFK
(restricted) Ga0255049_1050663923300024517SeawaterMKTKEAFKSLHPTLSQMQLQAAYQLSEIDGWHVEGKTASKDGMTLQLLENGNALK
(restricted) Ga0255048_1035869123300024518SeawaterMKTKEAFKSLHPTLNPMQLQAAYQLSEIDGWHVEGKTASRDGMTLQLLENGNALK
(restricted) Ga0255047_1032416343300024520SeawaterKTNKMTSKTKFKAQHPTLNAMQLQSAYQLSEIDGWHVEGKTASKEGVTLQLLENGNALK
(restricted) Ga0255047_1033433623300024520SeawaterMKTKEAFKSLHPTLNPMQLQAAYQLGEIDGWHVEGKTASKDGMTLQLLENGNALK
Ga0208148_102099623300025508AqueousMLTKLKFNPLHPTLNAMQLRAAYQLSEIEGWHVEGKTAFKDGLTLHLLWNGNALTSPTRLSTK
Ga0209304_108023913300025577Pelagic MarineMLTKLKFNLIHPTLNAMQQQAAYQLSEIEGWHVEGKTAFKDGLTLHLLENGN
Ga0209195_102191113300025590Pelagic MarineMLTKIKFNLLHPTLNAMQQQAAYQLSEIEGWHVEGKTAFKDGLTLHLLENGNALTSPTRLPTK
Ga0209405_1013653133300025620Pelagic MarineMKTKAKFNPLYPTLNAMQLQVAYQLSEIEGFHVEGKTAHK
Ga0209405_105588443300025620Pelagic MarineMKTKAKFNPLHPTLNAMQLQVAYQLSEIEGFHVEGKTAHKGGLMLHLHENGNALTYPEKCAE
Ga0209197_1000571373300025637Pelagic MarineMKTKAKFNPLYPTLNAMQLQVAYQLSEIEGFHVEGKTAHKGGLMLHLHENGNALTYPEKCAE
Ga0209197_1010341103300025637Pelagic MarineMKTKAKFNPLHPTLNAMQLQVAYQLSEIEGFHVEGKTAHKGGLMLHLHE
Ga0209833_1001452223300025641Pelagic MarineMITKIKFNLLHPTLNAMQQQAAYQLSEIEGWDVEGKKAFKDGLTIHLHENGNALCKPSRRLHGFN
Ga0208643_111695513300025645AqueousMLTKIKFNLLHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLHENGNALCKPLGG
Ga0208134_101511393300025652AqueousMLTKIKFNLLHPTLNAMQQQAAYQLSEIEGWHVEGKTAFKDGLTLHLLWNGNALTSPTRLSTK
Ga0209603_105591443300025849Pelagic MarineMLTKLKFNPLHPTLNAMQLQAAYQLSEIEGWHVEGKTAFKDGLTLHLLENGNALTSPTRLSTK
Ga0209603_117082513300025849Pelagic MarineKKMLTKIKFNLLHPTLNAMQQQAAYQLSEIEGWDVEGKTAFKDGLTLHLLENGNALTSPTRLSTK
Ga0209603_118550323300025849Pelagic MarineMLTKIKFNLLHPTLNAMQQQAAYQLSEIEGWHVEGKTAFKDGLTLYLHENGNALCKPQGGFQL
Ga0209308_1033219923300025869Pelagic MarineMLTKLKFNPLHPTLNAMQLRAAYQLSEIEGWDVEGKTAFKDGLTLHLH
Ga0209335_1022680513300025894Pelagic MarineKKMLTRIKFNLLHPTLNAMQQQTAYQLSEVEGWDVEGKTAFKDGLTLHLHENGNALCKPSSRIHGFN
Ga0209092_1010361143300027833MarineMLTKIKFSAQHPTLNAMQLQSAYQLSEIDGWHVNGKTAYKEGVTLQLLENGNALK
(restricted) Ga0233415_1003218653300027861SeawaterMKTKEAFKSLHPTLNPMQLQAAYQLSEIDGWHVEGKTASKDGMTKPKNK
Ga0209165_1007201023300027978Marine SedimentMTSKIKFSAQHPTLNAMQLQAAYQLSEIDGWHVNGKTAYKEGVTLQLLENGNALK
(restricted) Ga0233413_1002193623300027996SeawaterMKTREAFKSLHPTLNPMQLQAAWQLSEIDGWHVEGKTASKDGMTLRLLENGNALK
(restricted) Ga0233414_1001440673300028045SeawaterMLTKIKFKAQHPTLNARQLQAAYQLSEIDGWHVEGKTASKEGVTLQLLENGNALK
(restricted) Ga0233414_1027115233300028045SeawaterLTRIKFKAQHPTLNAMQLQSAYQLSEIDGWHVEGKTASKEGVTLQLLENGNALK
(restricted) Ga0233414_1034124613300028045SeawaterMMTSKPKFKEQHPTLNAMQLQAAYQLSEIDGWHVEGKTASKEGVTLQLLENGNALK
Ga0265309_1009871613300028599SedimentMLTRIKFKDQHPTLNAMQLQAAYQLSEIDGWHVSGKTAYKEGVTLQLLENGNALK


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