Metagenome Family F085321

Basic Information
Family ID	F085321
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	51 residues
Representative Sequence	MRIFGIVFATLGAGMILFALTYVTLLVGGLVNAMVVLISGPLVDRLLARKR
Number of Associated Samples	85
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.73 %
% of genes near scaffold ends (potentially truncated)	17.12 %
% of genes from short scaffolds (< 2000 bps)	68.47 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Most Common Taxonomy
Group	Bacteria (85.586 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (17.117 % of family members)
Environment Ontology (ENVO)	Unclassified (27.027 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.541 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.76% β-sheet: 0.00% Coil/Unstructured: 39.24%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00873	ACR_tran	34.23
PF13416	SBP_bac_8	10.81
PF13343	SBP_bac_6	1.80
PF02803	Thiolase_C	0.90
PF05199	GMC_oxred_C	0.90
PF07963	N_methyl	0.90
PF13618	Gluconate_2-dh3	0.90
PF14492	EFG_III	0.90
PF08402	TOBE_2	0.90
PF07676	PD40	0.90
PF00246	Peptidase_M14	0.90
PF00005	ABC_tran	0.90
PF00528	BPD_transp_1	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.90
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.59 %
Unclassified	root	N/A	14.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.59 %
Unclassified	root	N/A	14.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.59 %
Unclassified	root	N/A	14.41 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	48.65 %
Unclassified	root	N/A	14.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	48.65 %
Unclassified	root	N/A	14.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.41 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	1.80 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.41 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1.80 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.41 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	1.80 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.41 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1.80 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886013\|SwBSRL2_contig_673539	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	812	Open in IMG/M
3300000787\|JGI11643J11755_10821491	Not Available	518	Open in IMG/M
3300002124\|C687J26631_10065804	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300002243\|C687J29039_10267770	Not Available	592	Open in IMG/M
3300003319\|soilL2_10084593	All Organisms → cellular organisms → Bacteria	4966	Open in IMG/M
3300004019\|Ga0055439_10023062	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300004114\|Ga0062593_100011503	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4178	Open in IMG/M
3300004114\|Ga0062593_100171384	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300004114\|Ga0062593_100205708	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1573	Open in IMG/M
3300004463\|Ga0063356_100409464	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1748	Open in IMG/M
3300004463\|Ga0063356_100722307	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300004463\|Ga0063356_100905750	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1246	Open in IMG/M
3300004480\|Ga0062592_100006082	All Organisms → cellular organisms → Bacteria	4351	Open in IMG/M
3300004480\|Ga0062592_101697788	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	614	Open in IMG/M
3300004643\|Ga0062591_101524702	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	669	Open in IMG/M
3300004643\|Ga0062591_102083034	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005295\|Ga0065707_10880387	Not Available	573	Open in IMG/M
3300005367\|Ga0070667_100903150	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	822	Open in IMG/M
3300005438\|Ga0070701_10339469	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300005444\|Ga0070694_100288136	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1254	Open in IMG/M
3300005445\|Ga0070708_100086884	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2841	Open in IMG/M
3300005467\|Ga0070706_100616067	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1008	Open in IMG/M
3300005467\|Ga0070706_101343509	Not Available	655	Open in IMG/M
3300005467\|Ga0070706_101624669	Not Available	589	Open in IMG/M
3300005468\|Ga0070707_100194230	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1979	Open in IMG/M
3300005468\|Ga0070707_100280237	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1620	Open in IMG/M
3300005471\|Ga0070698_100058874	All Organisms → cellular organisms → Bacteria	3882	Open in IMG/M
3300005471\|Ga0070698_101574938	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	609	Open in IMG/M
3300005518\|Ga0070699_100000140	All Organisms → cellular organisms → Bacteria	67871	Open in IMG/M
3300005518\|Ga0070699_101901414	Not Available	544	Open in IMG/M
3300005518\|Ga0070699_102158447	Not Available	508	Open in IMG/M
3300005540\|Ga0066697_10141213	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1419	Open in IMG/M
3300005546\|Ga0070696_101769975	Not Available	533	Open in IMG/M
3300005617\|Ga0068859_100280303	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1759	Open in IMG/M
3300005836\|Ga0074470_10767059	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1550	Open in IMG/M
3300006844\|Ga0075428_100125941	All Organisms → cellular organisms → Bacteria	2788	Open in IMG/M
3300006845\|Ga0075421_100544597	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1372	Open in IMG/M
3300006854\|Ga0075425_100031556	All Organisms → cellular organisms → Bacteria	5881	Open in IMG/M
3300006854\|Ga0075425_100036723	All Organisms → cellular organisms → Bacteria	5456	Open in IMG/M
3300006854\|Ga0075425_101445886	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	777	Open in IMG/M
3300006871\|Ga0075434_100222769	All Organisms → cellular organisms → Bacteria	1906	Open in IMG/M
3300006914\|Ga0075436_100661632	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300009012\|Ga0066710_100210621	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2776	Open in IMG/M
3300009095\|Ga0079224_104291981	Not Available	560	Open in IMG/M
3300009147\|Ga0114129_10019744	All Organisms → cellular organisms → Bacteria	9592	Open in IMG/M
3300009162\|Ga0075423_11003578	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	887	Open in IMG/M
3300009687\|Ga0116144_10082561	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300009873\|Ga0131077_10004446	All Organisms → cellular organisms → Bacteria	34957	Open in IMG/M
3300009873\|Ga0131077_10007897	All Organisms → cellular organisms → Bacteria	26664	Open in IMG/M
3300010356\|Ga0116237_10153600	All Organisms → cellular organisms → Bacteria	2241	Open in IMG/M
3300010356\|Ga0116237_11672332	Not Available	519	Open in IMG/M
3300010391\|Ga0136847_11842118	All Organisms → cellular organisms → Bacteria	24664	Open in IMG/M
3300010391\|Ga0136847_13367892	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	775	Open in IMG/M
3300010399\|Ga0134127_11276012	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	803	Open in IMG/M
3300011419\|Ga0137446_1004675	All Organisms → cellular organisms → Bacteria	2333	Open in IMG/M
3300011428\|Ga0137456_1120381	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	691	Open in IMG/M
3300011433\|Ga0137443_1037432	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1294	Open in IMG/M
3300011433\|Ga0137443_1156339	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	676	Open in IMG/M
3300011444\|Ga0137463_1194229	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	761	Open in IMG/M
3300012040\|Ga0137461_1009084	All Organisms → cellular organisms → Bacteria	2291	Open in IMG/M
3300012360\|Ga0137375_10202594	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1876	Open in IMG/M
3300012922\|Ga0137394_11579079	Not Available	513	Open in IMG/M
3300012976\|Ga0134076_10560799	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	529	Open in IMG/M
3300013503\|Ga0120127_10159214	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	544	Open in IMG/M
3300014884\|Ga0180104_1237738	Not Available	543	Open in IMG/M
3300015248\|Ga0180079_1059145	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	576	Open in IMG/M
3300018056\|Ga0184623_10274453	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	766	Open in IMG/M
3300018063\|Ga0184637_10110672	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1692	Open in IMG/M
3300018075\|Ga0184632_10359447	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	621	Open in IMG/M
3300018079\|Ga0184627_10029110	All Organisms → cellular organisms → Bacteria	2775	Open in IMG/M
3300018084\|Ga0184629_10014449	All Organisms → cellular organisms → Bacteria	3143	Open in IMG/M
3300018422\|Ga0190265_11167983	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	889	Open in IMG/M
3300018469\|Ga0190270_10772018	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	964	Open in IMG/M
3300018476\|Ga0190274_11627144	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	739	Open in IMG/M
3300019458\|Ga0187892_10004454	All Organisms → cellular organisms → Bacteria	23474	Open in IMG/M
3300019458\|Ga0187892_10517216	Not Available	547	Open in IMG/M
3300019458\|Ga0187892_10525709	Not Available	540	Open in IMG/M
3300020057\|Ga0163151_10012300	All Organisms → cellular organisms → Bacteria	8571	Open in IMG/M
3300025146\|Ga0209322_10053843	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M
3300025160\|Ga0209109_10013980	All Organisms → cellular organisms → Bacteria → Acidobacteria	4319	Open in IMG/M
3300025910\|Ga0207684_10096453	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2524	Open in IMG/M
3300025922\|Ga0207646_10161403	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2023	Open in IMG/M
3300025922\|Ga0207646_10183372	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1890	Open in IMG/M
3300025922\|Ga0207646_10218443	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1722	Open in IMG/M
3300025922\|Ga0207646_10884196	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	793	Open in IMG/M
3300026016\|Ga0208779_1001911	All Organisms → cellular organisms → Bacteria	1767	Open in IMG/M
3300026116\|Ga0207674_11462414	Not Available	653	Open in IMG/M
3300026725\|Ga0207474_100371	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300026763\|Ga0207568_101557	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	756	Open in IMG/M
3300027682\|Ga0209971_1064427	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	888	Open in IMG/M
3300027691\|Ga0209485_1033593	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1248	Open in IMG/M
3300027880\|Ga0209481_10013898	All Organisms → cellular organisms → Bacteria	3498	Open in IMG/M
3300027964\|Ga0256864_1101922	All Organisms → cellular organisms → Bacteria → Proteobacteria	805	Open in IMG/M
3300028380\|Ga0268265_10110763	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2241	Open in IMG/M
3300028381\|Ga0268264_10453675	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1243	Open in IMG/M
3300030606\|Ga0299906_10000160	All Organisms → cellular organisms → Bacteria	67636	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1000528	All Organisms → cellular organisms → Bacteria	6064	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1143372	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	529	Open in IMG/M
3300031455\|Ga0307505_10016588	All Organisms → cellular organisms → Bacteria	3489	Open in IMG/M
3300031548\|Ga0307408_100106525	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2145	Open in IMG/M
3300031716\|Ga0310813_10044576	All Organisms → cellular organisms → Bacteria	3233	Open in IMG/M
3300031716\|Ga0310813_10084732	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2428	Open in IMG/M
3300031716\|Ga0310813_10342812	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300031965\|Ga0326597_10214807	All Organisms → cellular organisms → Bacteria	2245	Open in IMG/M
3300032017\|Ga0310899_10576266	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	561	Open in IMG/M
3300032163\|Ga0315281_10985223	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	856	Open in IMG/M
3300032205\|Ga0307472_101054503	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	766	Open in IMG/M
3300033407\|Ga0214472_10328634	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300033433\|Ga0326726_10020727	All Organisms → cellular organisms → Bacteria	5715	Open in IMG/M
3300033811\|Ga0364924_040791	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	972	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.48%
Host-Associated	Host-Associated	18.02%
Engineered	Engineered	4.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.46%
Aquatic	Environmental → Aquatic	18.02%
Plants	Host-Associated → Plants	18.02%
Wastewater	Engineered → Wastewater	4.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.95%
Sediment	Environmental → Aquatic → Sediment	13.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.21%
Freshwater	Environmental → Aquatic → Freshwater	3.60%
Cave	Environmental → Terrestrial → Cave	2.70%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	2.70%
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.80%
Marine	Environmental → Aquatic → Marine	0.90%
Peat	Environmental → Terrestrial → Peat	0.90%
Floodplain	Environmental → Terrestrial → Floodplain	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.33%
Loam	Environmental → Terrestrial → Soil → Loam	18.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	13.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.21%
Lake	Environmental → Aquatic → Freshwater → Lake	3.60%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	2.70%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	2.70%
Sand	Environmental → Terrestrial → Soil → Sand	1.80%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.80%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.90%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	13.51%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.21%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.70%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	2.70%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	2.70%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.80%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.90%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	17.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.01%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.01%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	8.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.11%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.50%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.60%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.70%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	2.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.80%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	1.80%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	1.80%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.90%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.90%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.90%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.90%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002124	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3	Environmental	Open in IMG/M
3300002243	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009687	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG	Engineered	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010356	AD_USDEca	Engineered	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015248	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT530_16_10D	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300020057	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2	Environmental	Open in IMG/M
3300025146	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 1	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026016	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026725	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A5-12 (SPAdes)	Environmental	Open in IMG/M
3300026763	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A4-12 (SPAdes)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027964	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111 HiSeq	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
SwBSRL2_0866.00007300	2162886013	Switchgrass Rhizosphere	MSTFAVIFAALGAGMILFALTYVTLLVGAIVNGMVVLISGPVIDKLVARKR
JGI11643J11755_108214912	3300000787	Soil	METFGVIFAALGAGMILFALVFVSLLVGGLVNGMVVLISGPVVDKLLXXKR*
C687J26631_100658042	3300002124	Soil	MRVFGIVFATLGAGMVLFALFYLNALLFALVNSMVLLMAGPLVDRFLARKR*
C687J29039_102677702	3300002243	Soil	MRVFGVVFAMLGAGMVLFALVYLNALLFGLVTSMVALMAGPLVDRFLARKR*
soilL2_100845936	3300003319	Sugarcane Root And Bulk Soil	MRTFGIVFASLGAGMVLFALLFLNGLLFGLVNSMVALMSGPVIDKFLARRKR*
Ga0055439_100230622	3300004019	Natural And Restored Wetlands	MKIFGIVFASLGAGMVLFALVYLNGLLFGLVNSMVTLMAGPLVDRILARRKQ*
Ga0062593_1000115032	3300004114	Soil	MRIFGIVFATLGAGMILFALTYVTLVVGGLVNGMVVLMAGPLMDRLLAKKQR*
Ga0062593_1001713842	3300004114	Soil	MRIFGIVFATLGAGMILFALTFVTLMVGGLVNGMVVLMAGPLVDRLLAKKR*
Ga0062593_1002057083	3300004114	Soil	METFGVIFAALGAGMILFALVFVSLLVGGLVNGMDVLISGPVVDKLLEKKR*
Ga0063356_1004094642	3300004463	Arabidopsis Thaliana Rhizosphere	METFGVIFAALGAGMILFALVFVSLLVGGLVNGMVVLISGPVVDKLLKEKR*
Ga0063356_1007223073	3300004463	Arabidopsis Thaliana Rhizosphere	RIFGIVFATLGAGMILFALTYVTLVVGGLVNGMVVLMAGPLMDRLLAKKQR*
Ga0063356_1009057501	3300004463	Arabidopsis Thaliana Rhizosphere	MELFGRIFAALGAGMILFALTYVTLLVGALVHGMVALISGPVIDRIVEKKR*
Ga0062592_1000060825	3300004480	Soil	METFGRIFAALGAGMILFALTYVTLLVGALVNGMVVLMAGPVIDKMAARKR*
Ga0062592_1016977881	3300004480	Soil	MSTFAVIFAALGAGMILFALTYVTLLVGAIVNGMVVLISGPVIDKLVARKR*
Ga0062591_1015247021	3300004643	Soil	METFGVIFAALGAGMILFALVFVSLLVGGLVNGMVVLISGPVVDKLLEKKR*
Ga0062591_1020830341	3300004643	Soil	METFVRIFAALGAGMILFALTYVTLLVGGIVNGMVVLISGPLVDKLVARKR*
Ga0065707_108803872	3300005295	Switchgrass Rhizosphere	MRIFGIVFATLGAGMILFALTYVTLVVGGLVNGMVVLMAGPLVDRLLSKQSKPGRPA*
Ga0070667_1009031502	3300005367	Switchgrass Rhizosphere	METIVRIFAALGAGMILFALTYVTLLVGGIVNGMVVLISGPLVDKLLAKKR*
Ga0070701_103394692	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MSTFAIIFAALGAGMILFALTYVTLLVGAIVNGMVVLISGPVIDKLVARKR*
Ga0070694_1002881362	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	METFGVIFAALGAGMILFALVFVSLLVGGLVNGMVVLISGPVVDKLLDKKR*
Ga0070708_1000868843	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	METFVVVFAALGAGMILFALTYVTLLVGGIVNAMVVLISGPVVDRLVAKRR*
Ga0070706_1006160672	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MQAFWILFAILGAAMVLFALTYVTLLIGGLVNAMVVLISGPLVDRLLAKKR*
Ga0070706_1013435092	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRIFGIVFATLGAGMILFALTYVTLVVGGLVNGMVVLMAGPLVDRLLSKRSKPGRPA*
Ga0070706_1016246691	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRVFGVVFATLGAGMILFALTYVTLVVGGLVNAMVVLMAGPLVDRLLARKR*
Ga0070707_1001942302	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRIFGIVFATLGAGMILFALTYVTLVVGGLVNGMVVLMAGPLVDRMLARKNRQ*
Ga0070707_1002802373	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEIFARVFAALGAGMILFALTFVTLLIGALVNSMVVLMAGPLIDRFLTPKR*
Ga0070698_1000588743	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRIFGIVFATLGAGMILFALTYVTLVVGGLVNGMVVLMAGPLVDRLLAKKPKPGRPA*
Ga0070698_1015749382	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRIFGIVFAILGAGMILFALTYVTLVVGGLVNGMVVLMAGPLVDRMLARKNRQ
Ga0070699_10000014050	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	METFGVIFAALGAGMILFALTYVTLLVGAIVNGMVVLISGPLVDKLVDRKR*
Ga0070699_1019014142	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRIFGIVFATLGAGMILFALTYVTLVVGGLVNGMVVLMAGPLVDRLLAKQSKPGRPA*
Ga0070699_1021584471	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRVFGVVFATLGAGMILFALTYVTLVVGGLVNGMVVLMAGPLVDRMLARKNRQ*
Ga0066697_101412132	3300005540	Soil	MEIFARVFAGLGAGMILFALTFVTLLIGGLVNSMVVLISGPLVDRLLAKKR*
Ga0070696_1017699751	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	GIVFATLGAGMILFALTYVTLVVGGLVNGMVVLMAGPLMDRLLAKKQR*
Ga0068859_1002803033	3300005617	Switchgrass Rhizosphere	MSTFAIIFAALGAGMILFALTYVTLLVGGIVNGMVVLISGPLVDKLVARKR*
Ga0074470_107670593	3300005836	Sediment (Intertidal)	FATLGAGMILFALTYVTLLVGGLVNAMVVLMAGPLMDRLLARKN*
Ga0075428_1001259412	3300006844	Populus Rhizosphere	METFGRIFAALGAGMILFALTYVTLLVGALVNGMVVLMAGPVIDKLAARKR*
Ga0075421_1005445972	3300006845	Populus Rhizosphere	MRIFGIVFATLGAGMILFALTYVTLVVGGLVNAMVVLMAGPLVDRLLARKR*
Ga0075425_1000315566	3300006854	Populus Rhizosphere	MRIFGIVFATLGAGMILFALTYVTLLVGGLVNAMVVLISGPLVDRLLARKR*
Ga0075425_1000367233	3300006854	Populus Rhizosphere	MRIFGIVFATLGAGMILFALTYVTLVVGGLVNGMVVLISGPLVDRLLSKKSPPRGA*
Ga0075425_1014458861	3300006854	Populus Rhizosphere	MRIFGIVFAIAGAGMILFALTYVTLAVGGLVNAMVVLMSGPLIDKFLARKKR*
Ga0075434_1002227693	3300006871	Populus Rhizosphere	MRIFGIVFATLGAGMILFALTYVTLLVGGLVNAMVALISGPLVDRLLARKR*
Ga0075436_1006616321	3300006914	Populus Rhizosphere	CLTKAGAMRIFGIVFATLGAGMILFALTYVTLLVGGLVNAMVVLISGPLVDRLLARKR*
Ga0066710_1002106213	3300009012	Grasslands Soil	MEIFARVFAGLGAGMILFALTFVTLLIGGLVNSMVVLISGPLVDRLLAKKR
Ga0079224_1042919811	3300009095	Agricultural Soil	MLNLFGMVFAALGAGMILFALTYVTLLVGAIVNAMVVLMAGPLIDRFVKEQPAG*
Ga0114129_100197443	3300009147	Populus Rhizosphere	METFGVIFAALGAGMILFALVFVSLLVGGLVNGMVVLISGPVVDKLLGKKR*
Ga0075423_110035782	3300009162	Populus Rhizosphere	MRIFGIVFAIAGAGMILFALTYVTLAVGGLVNAMVVLMSGPLIDKFLAR
Ga0116144_100825613	3300009687	Anaerobic Digestor Sludge	MWNSIGIVFAALGAGMILFALTYVTLLVGAIVNAMVVLMAGPVIDRFVKE*
Ga0131077_1000444625	3300009873	Wastewater	MWSTIGIVFAALGAGMILFALTYVTLLVGAIVNAMVVLMAGPVIDRFVKE*
Ga0131077_1000789710	3300009873	Wastewater	MLNTIGTIFAALGAGMILFALTYVTLLVGAIVHAMAILMAGPLIDRFVKE*
Ga0116237_101536001	3300010356	Anaerobic Digestor Sludge	MWNTIGIVFAALGAGMILFALTYVTLLVGAIVNAMVVLMAGPVVDRFVKE*
Ga0116237_116723322	3300010356	Anaerobic Digestor Sludge	MWNSIGIVFAALGAGMILFALTYVTLLVGAIVNAMVVLMAGPVVD
Ga0136847_1184211812	3300010391	Freshwater Sediment	MELFGRIFATLGAGMILFALIFVTLLVGALVNAMVVLMSGPLIDRIAARKR*
Ga0136847_133678922	3300010391	Freshwater Sediment	METFGVIFAALGAGMILFALVFVTLLVGGLVNGMVVLISGPVVDKLLDKKR*
Ga0134127_112760122	3300010399	Terrestrial Soil	METFVRIFAALGAGMILFALTYVTLLVGAIVNGMVVLISGPVIDKLVARKR*
Ga0137446_10046754	3300011419	Soil	MELFGVIFATLGAGMILFALIYVTLLVGALVNGMVVLMSGPLIDKLVDRKR*
Ga0137456_11203811	3300011428	Soil	METFAVIFAALGAGMILFALTYVTLLVGAIVNGMVVLISGPVIDKL
Ga0137443_10374322	3300011433	Soil	MSAFGVIFATLGAGMILFALTYVTLLVGAIVNAMVVLMSGPLIDRLVARKR*
Ga0137443_11563392	3300011433	Soil	METFAVIFAALGAGMILFALTYVTLLVGAIVNGMVVLISGPVIDKLVARKR*
Ga0137463_11942292	3300011444	Soil	METFVVVFAALGAGMILFALTYVTLLVGGIVNAMVVLISGPVVDKLVARRR*
Ga0137461_10090844	3300012040	Soil	MALLGVIFATLGAGMILFALTYVTLLVGAIVNAMVVLMSGPLIDRLAARKR*
Ga0137375_102025943	3300012360	Vadose Zone Soil	MVIFARVFAGLGAGMILFALTYVTLLIGGLVNAMVVLMSGPLVDRLFARKR*
Ga0137394_115790791	3300012922	Vadose Zone Soil	MLAIFGVVFATLGAALILFALTFVSLLIGAIITAMIVLISGQLIDG
Ga0134076_105607992	3300012976	Grasslands Soil	MEIFARVFAGLGAGMILFALTFVTLLIGVLVNCMVALISGPLVDRLLAKKR*
Ga0120127_101592142	3300013503	Permafrost	METIVRIFAALGAGMILFALTYVTLLVGEIVNAMVVLISGPVVDKLVARKR*
Ga0180104_12377382	3300014884	Soil	METFAVIFAALGAGMILFALVFVSLLVGGLVNGMVVLISGPVVDKLLKEKR*
Ga0180079_10591451	3300015248	Soil	METFAVIFAALGAGMILFALTYVTLLVGAIVNGMVVLISGPVIDKLVARKR
Ga0180089_11123391	3300015254	Soil	METFAVIFAALGAGMILFALTYVTLLVGAIVNGMVVLISGP
Ga0184623_102744532	3300018056	Groundwater Sediment	METFGAIFAALGAGMILFALVFVTLLVGGLVNGMVVLISGPVVDKLLAKRR
Ga0184637_101106722	3300018063	Groundwater Sediment	METFGVVFAALGAGMILFALVFVTLLVGGLVNGMVVLIAGPVVDKLLDKKR
Ga0184632_103594472	3300018075	Groundwater Sediment	METFGAIFAALGAGMILFALVFVTLLVGGLVNGMVVLISGPVVDKLLDKKR
Ga0184627_100291103	3300018079	Groundwater Sediment	METFGVIFAALGAGMILFALVFVTLLVGGLVNGMVVLIAGPVVDKLLDKKR
Ga0184629_100144493	3300018084	Groundwater Sediment	METFGVIFAALGAGMILFALVFVSLLVGGLVNGMVVLISGPVVDKLLDKKR
Ga0190265_111679832	3300018422	Soil	METIVVLFAALGAGMILFALVFVSLLVGGLVNGMVVLISGPVLDRFLDKKR
Ga0190270_107720183	3300018469	Soil	METFGVIFAALGAGMILFALVFVSLLVGGLVNGMVVLISGPVVDKLLKEKR
Ga0190274_116271441	3300018476	Soil	VIFAALGAGMILFALTYVTLLVGALVNGMVVLMSGPLIDKIADRKKR
Ga0187892_100044545	3300019458	Bio-Ooze	VKVFGVVFATLGAGMVLFALVYLNALLFGLVNSMVVLMAGPLVDKFLARKR
Ga0187892_105172161	3300019458	Bio-Ooze	TLGAGMILFALTYVTLVVGGLVNGMVVLMAGPLVDKLMARREARRARR
Ga0187892_105257092	3300019458	Bio-Ooze	MRIFGIVFAALGAGMVLFALLYLNALLFGLVNSMVALMAGPLVDRFLARKR
Ga0163151_100123003	3300020057	Freshwater Microbial Mat	MWNTIGIVFAALGAGMILFALTYVTLLVGAIVNAMVVLMAGPIIDRFVKE
Ga0209322_100538432	3300025146	Soil	MRVFGVVFAMLGAGMVLFALVYLNALLFGLVTSMVALMAGPLVDRFLARKR
Ga0209109_100139802	3300025160	Soil	MRVFGIVFATLGAGMVLFALFYLNALLFALVNSMVLLMAGPLVDRFLARKR
Ga0207684_100964532	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MQAFWILFAILGAAMVLFALTYVTLLIGGLVNAMVVLISGPLVDRLLAKKR
Ga0207646_101614033	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRIFGIVFATLGAGMILFALTYVTLVVGGLVNGMVVLMAGPLVDRMLARKNRQ
Ga0207646_101833723	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSTFAIIFAALGAGMILFALTYVTLLVGAIVNGMVVLISGPVIDKLVARKR
Ga0207646_102184433	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRIFGIVFATLGAGMILFALTYVTLVVGGLVNAMVVLISGPLVDRLLARKR
Ga0207646_108841962	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MEIFARVFAALGAGMILFALTFVTLLIGALVNSMVVLMAGPLIDRFLTPKR
Ga0208779_10019112	3300026016	Natural And Restored Wetlands	MKIFGIVFASLGAGMVLFALVYLNGLLFGLVNSMVTLMAGPLVDRILARRKQ
Ga0207674_114624142	3300026116	Corn Rhizosphere	MRIFGIVFATLGAGMILFALTFVTLMVGGLVNGMVVLMAGPLVDRLLAKKR
Ga0207474_1003713	3300026725	Soil	MRIFGIVFATLGAGMILFALTYVTLVVGGLVNGMVVLMAGPLMDRLLAKKQR
Ga0207568_1015572	3300026763	Soil	METFGRIFAALGAGMILFALTYVTLLVGALVNGMVVLMAGPVI
Ga0209971_10644271	3300027682	Arabidopsis Thaliana Rhizosphere	LFGVVFATLGAGMILFALTFVTLLVGALVNGMVVLMSGPLIDKLVARKR
Ga0209485_10335931	3300027691	Agricultural Soil	VVFATLGAGMILFALTFVTLLVGALVNGMVVLMSGPLIDKLVARKR
Ga0209481_100138983	3300027880	Populus Rhizosphere	METFGRIFAALGAGMILFALTYVTLLVGALVNGMVVLMAGPVIDKLAARKR
Ga0256864_11019222	3300027964	Soil	MLQTVTVLFAGLGATMIIFALAFVTLLVGALVNAMVVLIAGPILDRFVKEPASPSAG
Ga0268265_101107632	3300028380	Switchgrass Rhizosphere	METFVRIFAALGAGMILFALTYVTLLVGGIVNGMVVLISGPLVDKLVARKR
Ga0268264_104536753	3300028381	Switchgrass Rhizosphere	METIVRIFAALGAGMILFALTYVTLLVGGIVNGMVVLISGPLVDKLLAKKR
Ga0299906_1000016030	3300030606	Soil	MLQTVTVLFAGLGATMIIFALAFVTLLVGALVNAMVVLIAGPILDRFVKEPAPPSAG
(restricted) Ga0255311_10005288	3300031150	Sandy Soil	MRIFGIVFATLGAGMILFALTYVTLVVGGLVNGMVVLMAGPLVDRLLAKKQRPGRAA
(restricted) Ga0255311_11433722	3300031150	Sandy Soil	VELFGRIFASLGAGMILFALVFVTLLVGALVNAMVALMSGPLIDRLVTRKR
Ga0307505_100165884	3300031455	Soil	MLNLIGTVLAVLGAGMILFALTYVTLLVGALVNAMVVLMAGPVIDRFVKD
Ga0307408_1001065254	3300031548	Rhizosphere	MELFGVVFATLGAGMILFALTFVTHLVGALVNGLVVLMSGPLIDKLVAR
Ga0310813_100445764	3300031716	Soil	MRIFGIVFATLGAGMILFALTYVTLLVGGLVNAMVALISGPLVDRLLARKR
Ga0310813_100847323	3300031716	Soil	MRIFGIVFATLGAGMILFALTYVTLVVGGLVNGMVVLISGPLVDRLLSKKSRPRGA
Ga0310813_103428121	3300031716	Soil	MRIFGIVFATLGAGMILFALTYVTLLVGGLVNAMVALISGPLV
Ga0326597_102148072	3300031965	Soil	MRIFGIIFATLGAGMILFALTYVTLVVGGLVNGMVALMAGPLIDKLIAKRARK
Ga0310899_105762662	3300032017	Soil	IPEGTMETFVRIFAALGAGMILFALTYVTLLVGGIVNGMVVLISGPLVDKLVARKR
Ga0315281_109852232	3300032163	Sediment	MQLFGIVFAILGAGMILFALTYVTLVVGGLVNGMVVLMAGPLIDKFLAKRSQRAPRR
Ga0307472_1010545032	3300032205	Hardwood Forest Soil	MQAFWILLAILGAAMILFALTYVTLLIGGLVNAMVVLISGPLVDRLLARKR
Ga0214472_103286341	3300033407	Soil	RGGAMRVFGVVFAMLGAGMVIFALLYLNALLFGLVNSMVVLMAGPLVDRFLARKR
Ga0326726_100207274	3300033433	Peat Soil	METIVRIFAALGAGMILFALTYVTLLVGGIVNGMVVLISGPLVDRLVARKR
Ga0364924_040791_232_387	3300033811	Sediment	MELFGIIFATLGAGMILFALTFVTLLVGALVNAMVVLMAGPLIDRIAARKR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters