Metagenome / Metatranscriptome Family F085126

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Overview

Basic Information
Family ID	F085126
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	69 residues
Representative Sequence	VSVQKVLLCPFHCKPRPSGVSLESPRLENILQVPGNGAEVDENYDARNGLSAILSVLNLSRAIF
Number of Associated Samples	11
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	40.00 %
% of genes near scaffold ends (potentially truncated)	50.45 %
% of genes from short scaffolds (< 2000 bps)	98.20 %
Associated GOLD sequencing projects	11
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral (94.595 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal corpus (94.595 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104. 1Ga0099809_100209401 2Ga0099809_101798181 3Ga0099806_10627562 4Ga0099806_12203861 5Ga0099806_12705351 6Ga0099806_13105231 7Ga0099806_13478391 8Ga0099804_12550451 9Ga0133901_1056451 10Ga0133907_10248671 11Ga0133900_10743411 12Ga0133900_11257911 13Ga0133900_11411451 14Ga0133905_10929591 15Ga0126338_100401371 16Ga0126338_100763512 17Ga0126338_101133921 18Ga0126338_101232021 19Ga0126338_101261211 20Ga0126338_101408201 21Ga0126338_101444432 22Ga0126338_101566861 23Ga0126338_101731701 24Ga0126338_101736512 25Ga0126338_101783411 26Ga0126338_101837142 27Ga0126338_101842731 28Ga0126338_101904471 29Ga0126338_101917171 30Ga0126338_101956631 31Ga0126338_101972551 32Ga0126338_102014002 33Ga0126338_102028101 34Ga0126338_102055991 35Ga0126338_102185442 36Ga0126338_102295911 37Ga0126338_102329641 38Ga0126338_102389081 39Ga0126338_102439352 40Ga0126338_102439831 41Ga0126338_102466672 42Ga0126338_102483241 43Ga0126338_102532181 44Ga0126338_102627191 45Ga0126338_102642991 46Ga0126338_102726181 47Ga0126338_102767831 48Ga0126338_102801911 49Ga0126338_102828161 50Ga0126338_102858501 51Ga0126338_102919601 52Ga0126338_102929492 53Ga0126338_102950692 54Ga0126338_103016931 55Ga0126338_103095651 56Ga0126338_103105971 57Ga0126338_103125941 58Ga0126338_103206751 59Ga0126338_103211661 60Ga0126338_103225221 61Ga0126338_103296672 62Ga0126338_103297821 63Ga0126338_103368561 64Ga0126338_103446431 65Ga0126338_103456381 66Ga0126338_103466961 67Ga0126338_103552351 68Ga0126336_104060262 69Ga0126339_102874451 70Ga0126339_103178412 71Ga0126339_104478571 72Ga0126339_105177591 73Ga0126339_105617981 74Ga0126339_105779551 75Ga0126339_105806861 76Ga0126339_106158861 77Ga0126339_106347531 78Ga0126339_107038931 79Ga0126341_10212241 80Ga0126341_10257341 81Ga0126341_10267401 82Ga0126341_10481971 83Ga0126341_10723501 84Ga0126341_10786151 85Ga0126341_10891831 86Ga0126341_11030351 87Ga0126341_11138181 88Ga0126341_11338721 89Ga0126341_11606051 90Ga0126341_11686701 91Ga0126341_11711261 92Ga0126341_11740991 93Ga0126341_11776451 94Ga0126341_11835701 95Ga0126341_11873331 96Ga0126341_11904831 97Ga0126341_11940381 98Ga0126341_12003081 99Ga0126341_12017312 100Ga0126341_12050022 101Ga0126341_12084221 102Ga0126341_12122101 103Ga0126341_12154451 104Ga0126341_12157692 105Ga0126341_12201181 106Ga0126341_12282841 107Ga0126341_12322441 108Ga0126341_12342041 109Ga0126341_12371111 110Ga0126341_12386191 111Ga0126341_12433671
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104. 1Ga0099809_100209401 2Ga0133901_1056451 3Ga0133905_10929591 4Ga0126338_101842731 5Ga0126338_101904471 6Ga0126338_102014002 7Ga0126338_102295911 8Ga0126338_102389081 9Ga0126338_102767831 10Ga0126338_102858501 11Ga0126338_102929492 12Ga0126338_103456381 13Ga0126338_103466961 14Ga0126339_105177591 15Ga0126339_105779551 16Ga0126339_107038931 17Ga0126341_10723501 18Ga0126341_11776451 19Ga0126341_12371111
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64 1Ga0126338_102828161 2Ga0099806_10627562 3Ga0099806_12203861 4Ga0133905_10929591 5Ga0126338_101232021 6Ga0126338_101261211 7Ga0126338_101566861 8Ga0126338_101736512 9Ga0126338_101783411 10Ga0126338_101917171 11Ga0126338_101956631 12Ga0126338_102014002 13Ga0126338_102055991 14Ga0126338_102185442 15Ga0126338_102295911 16Ga0126338_102389081 17Ga0126338_102466672 18Ga0126338_102483241 19Ga0126338_102532181 20Ga0126338_102627191 21Ga0126338_102767831 22Ga0126338_102801911 23Ga0126338_102858501 24Ga0126338_103095651 25Ga0126338_103125941 26Ga0126338_103211661 27Ga0126338_103225221 28Ga0126338_103296672 29Ga0126338_103446431 30Ga0126338_103456381 31Ga0126338_103466961 32Ga0126338_103552351 33Ga0126336_104060262 34Ga0126339_104478571 35Ga0126339_105779551 36Ga0126339_106158861 37Ga0126339_107038931 38Ga0126341_10212241 39Ga0126341_10257341 40Ga0126341_10267401 41Ga0126341_10481971 42Ga0126341_10723501 43Ga0126341_11030351 44Ga0126341_11138181 45Ga0126341_11776451 46Ga0126341_11835701 47Ga0126341_11904831 48Ga0126341_11940381 49Ga0126341_12050022 50Ga0126341_12122101 51Ga0126341_12154451 52Ga0126341_12157692 53Ga0126341_12342041 54Ga0126341_12371111
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.57% β-sheet: 0.00% Coil/Unstructured: 80.43%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300008013\|Ga0099809_10020940	Not Available	559	Open in IMG/M
3300008013\|Ga0099809_10179818	Not Available	784	Open in IMG/M
3300008041\|Ga0099806_1062756	Not Available	564	Open in IMG/M
3300008041\|Ga0099806_1220386	Not Available	530	Open in IMG/M
3300008041\|Ga0099806_1270535	Not Available	562	Open in IMG/M
3300008041\|Ga0099806_1310523	Not Available	508	Open in IMG/M
3300008041\|Ga0099806_1347839	Not Available	523	Open in IMG/M
3300008044\|Ga0099804_1255045	Not Available	576	Open in IMG/M
3300010010\|Ga0133901_105645	Not Available	998	Open in IMG/M
3300010015\|Ga0133907_1024867	Not Available	586	Open in IMG/M

Showing 1 to 10 of 110 entries

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Environmental Properties

Associated Habitat Types

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Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Human	Host-Associated → Human	5.41%
Invertebrates	Host-Associated → Invertebrates	94.59%

Habitat	Taxonomy	Distribution
Cnidaria	Host-Associated → Invertebrates → Cnidaria	94.59%
Digestive System	Host-Associated → Human → Digestive System	5.41%

Habitat	Taxonomy	Distribution
Coral	Host-Associated → Invertebrates → Cnidaria → Coral	94.59%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	5.41%

Habitat	Taxonomy	Distribution
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	5.41%
Unclassified	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified	94.59%

Habitat	Taxonomy	Distribution
Coral	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral	94.59%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	5.41%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300008013	Coral microbial communities from Puerto Morelos, Mexico - Orbicella T R C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008041	Coral microbial communities from Puerto Morelos, Mexico - Orbicella C C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008044	Coral microbial communities from Puerto Morelos, Mexico - Orbicella C A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300010010	Microbial communities of stony corals with Black-band disease (BBD) from Carrie Bow Cay Field Station, Belize; BBD Transitions coral #3 sample B3	Host-Associated	Open in IMG/M
3300010015	Microbial communities of stony corals with Black-band disease (BBD) from Carrie Bow Cay Field Station, Belize; BBD Transitions coral #4 sample B4	Host-Associated	Open in IMG/M
3300010020	Microbial communities of stony corals with Black-band disease (BBD) from Carrie Bow Cay Field Station, Belize; BBD Transitions coral #2 sample T2	Host-Associated	Open in IMG/M
3300010021	Microbial communities of stony corals with Black-band disease (BBD) from Carrie Bow Cay Field Station, Belize; BBD Transitions coral #3 sample T3	Host-Associated	Open in IMG/M
3300010030	Coral microbial communities from Petempiche,Puerto Morelos, Mexico - Orbicella C C metagenome	Host-Associated	Open in IMG/M
3300010032	Coral microbial communities from El Islote,Puerto Morelos, Mexico - Siderastrea C C metagenome	Host-Associated	Open in IMG/M
3300010033	Coral microbial communities from Petempiche,Puerto Morelos, Mexico - Orbicella T R C metagenome	Host-Associated	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0099809_100209401	3300008013	Coral	VSVQKVLLCPFHCKPRPSGLSLESPGLENILQVPGNDAEVDENYDARNGLSAVLSVLNLIRAIFRP*
Ga0099809_101798181	3300008013	Coral	VAIFRPTSSKVIVQKVFLCPFHSKPRPSRVSLESPGLENILQVPGNAAEVDENYDARNGLSAILSVLNLSRAIFRS*
Ga0099806_10627562	3300008041	Coral	MLSPFHCKPRPSGVSIEFPGLENILQVPGNGAEVDEYYDARNGLSAILSVLNLSRAIFGP
Ga0099806_12203861	3300008041	Coral	VSVEKVLLSPFHCKPRPSGVSLESLGLENILQVPGNGDEVDEDYYASNGLSAILSVLNLSTAIFRP*
Ga0099806_12705351	3300008041	Coral	VSVQKVLLCPFDCKPRQSGVSLESPELENIRQVPGNGAEVDENYDARNGLSVILSVLNLSRAILRH*
Ga0099806_13105231	3300008041	Coral	VSVHKVLLCPFHCKPRQSGVSLESPELENILQVPVNGAEVDENYDARNGLSVILSVLNLS
Ga0099806_13478391	3300008041	Coral	VCVQKLVLCEFHCKPWPSGVSLESPGLENILQVPGNGAEVDENYDARNGLSAILSVLNLSRA
Ga0099804_12550451	3300008044	Coral	VAIFRPTSSKVSVQKVLLCPFHCKPRPSGVSIESPDLENILQVPGNGAEVDENYDARNGLSAILSVLNLSRAIFRP*
Ga0133901_1056451	3300010010	Host-Associated	VAIFRPTSSKVSVQKVLLCPFDCKPRQSGVSLESPELENILQVPGNGAEVDENYDARNGLSVILSVLNLSRAILRH*
Ga0133907_10248671	3300010015	Host-Associated	DCKPRPSGVSLESPGLENILQVPGNGAEVDENYDARNGLSAILSVLNLSRAIFRP*
Ga0133900_10743411	3300010020	Host-Associated	MAKSRPTSSKVSVQKALLCPFHWKPRPSGVSLESPGLENILQIPGNGAEVDENYDARNGLSAILSVFNLSTAIFRP*
Ga0133900_11257911	3300010020	Host-Associated	VSLQKVLLFPFHCEPRPSGVSIESPGLENILQVPGNGAEVDENYDARNGLSAILLVLNLSRAIFRP*
Ga0133900_11411451	3300010020	Host-Associated	VAISRPTSSKVRVQKGLLCPFHCKPRPSGVRLESPGLEHILQVPGNGAEVDENYDARNGLSAILLVLNLSRAIFRP*
Ga0133905_10929591	3300010021	Host-Associated	VRVEKVLLCSFHRRPRPKGVSLESTGLENILQVPGHRAEVDQYHDARNALSATFSVLKLSTAIFRARSSKVIVQNVLL
Ga0126338_100401371	3300010030	Coral	VAIFRPTSSKASVQKVLLCPFHCKTRPSGVSRESPGLENTLQVPGNGAEVDENYDARNGLSAILSVLNLSRAIFRP*
Ga0126338_100763512	3300010030	Coral	VRVQKVLLCPFHWKARPSGVSLESPGLENILQVPGNRAEVDQNHHARNGLSAILSVLNLSRA
Ga0126338_101133921	3300010030	Coral	VAIFRPTSSKVSVQKVLLCPFHCKARESGVSLESPGLENILQVPGNGAEVYENYDARNGLSAILSVLNLSRAIFGP*
Ga0126338_101232021	3300010030	Coral	VAIFRPTSSKVSVQKVLLCAFQCIAGRSGVSLESSGLENILQVPGNGAEVDENYDARNELSTVLSVLNLSRAIFRP*
Ga0126338_101261211	3300010030	Coral	VKWGNISAQKKSFEKVLQCPFHSKPRPSGVSLESPGLENILQIPGNGAEVDENYDARNGLSAVLSVLNLSRAIFRP*
Ga0126338_101408201	3300010030	Coral	VSVEKVLLCPFHCKPRPAGVSLESPGLENILQVPGNGAEVDENYDARNGLSAILSVLN
Ga0126338_101444432	3300010030	Coral	VSVQKVLLCPFHCKTRPSGVRIESPGLENILQVPGNGAEVDENYDARNGLSAILSVLNLSRA
Ga0126338_101566861	3300010030	Coral	MAIFRPTRSKVSVKKVLLCPFHCKPRSSGASFESPGLENILQVPGDGAEVDENYDARNGFSAILSVLNLSRAIFGP*
Ga0126338_101731701	3300010030	Coral	VAIFRPTSAKVSVQKVLLCPYHCKPRPSGVSRESPGLENILQVPGNGAEVDENYDARNGLTAILSVLNLSRAIFGP*
Ga0126338_101736512	3300010030	Coral	VSVRKGLLCPFHCKARPSGVSIESPGLENILQVPGNGAEVDENYAARNELSAILSVLNLSRAIFRP*
Ga0126338_101783411	3300010030	Coral	VAIFRPTSSKLSVQTVLLCPFDCKPRPSGVSIESPGLENILQVPGNGAEVDENDDGRNGLSAILSVLNLSRAIFGR*
Ga0126338_101837142	3300010030	Coral	VSVQKVLLCPFHCKPRQSGVSLESPGLENILQVPGNGAEVDEKYDARNGLSAILSVL
Ga0126338_101842731	3300010030	Coral	VSVQKVLLCPFHCKPRQSGFSLESPELQNILQVPGNGAEVDENYDARNGLSVILS
Ga0126338_101904471	3300010030	Coral	VCVQKLVLCAFHCKAWPSGVSLESPGLENILQVPGNGAEVDENYHARNGLSAILAVLNLSRVYFGPEARR*
Ga0126338_101917171	3300010030	Coral	VQKVLLCPFDCKPRISGVSLESPEMENILQVPGNGADVDEKYDARNGLSVILSVLNLSRAILQH*
Ga0126338_101956631	3300010030	Coral	MRPTSSKVSVQKVLLCPFDCKPWQSGVSLESPELENILQVPGNGAEFDENYDARNGLSVIISALN*
Ga0126338_101972551	3300010030	Coral	KVLLCPFHWKPRPSGVSLESPGLENILQVPGNRAEVDQNHDARNALSANLSVLNLSRAIFRP*
Ga0126338_102014002	3300010030	Coral	SKVCIQKLVLCEFHCKPWPSGVSLESPGLENILQFQGKRAGADENEDARNVVSATVSDLK
Ga0126338_102028101	3300010030	Coral	MSVQKVLPCPFHCKPRPSGVSLESPGLENILQAPENGAEVDENYDARNGLSAILSVLNLSRAIFGP*
Ga0126338_102055991	3300010030	Coral	VCIQKLVLCEFHWKPWPSGVSLESPGLENILQVPGNGAEVDENYDARNGLSAILPVLNLSRDIFRP*
Ga0126338_102185442	3300010030	Coral	VSVQKVLLSPFHWKPRPSGVSLEFPGLENVLQVPGNGAEVDENYDARIGLSAIFSVLNLSRAIFRP*
Ga0126338_102295911	3300010030	Coral	PTSSKVSVQKVLLCPFHYKPRPSGVSLESPGLENILQVPGNRAEVDENYDARKAVSATLSVLKLMGAIFRPRSSRPGVR*
Ga0126338_102329641	3300010030	Coral	VAIFRPTSSKVSVQKVLLCPFDCKPRQSGVSLESPELENILQVPGNGAELDGNYDARNGLSVILSVLNLSRAILRH*
Ga0126338_102389081	3300010030	Coral	LLCPFDCKPSQSGVSLEFPELENFLQVPGNRVEVDENYDARNGLSVILSVLNLSRAILRD
Ga0126338_102439352	3300010030	Coral	VRVQKVLLCPFHLKPRPSGVTLESPGLENILQVPGNRAEVDQNHNARNGLSAILSVLNLS
Ga0126338_102439831	3300010030	Coral	VAIFRPTSSKVSVQKVLLCPFHCKPRLSGVSIESPRLENILQVLGNGAEVDENYDARNGLSAILSVLNLSRAIFRPEALR*
Ga0126338_102466672	3300010030	Coral	VQKVLLCPFHWKPRPSGVSLEFPGVEDILQVPGNRAEVDQNNHARNGLSAILSVLNLSRTLFRP*
Ga0126338_102483241	3300010030	Coral	VSVQKVLLCPFHWKPRPSGVSIESPGLETILQVPGNGAEVDENYNARNGLLAILLVLNLSRAIFRP*
Ga0126338_102532181	3300010030	Coral	VRVQKVLLCPFHWKPRPSGVSLESPALENILQVPGNRAEVDQNHHARNGLSAILSVLNLSRAIFRP
Ga0126338_102627191	3300010030	Coral	IFRPTSSKVSVQKALLCPFDCKPRQSGVSLESPQLENILQAPGNGAEVDENYDACNGLSVILSVLNLSRAILRH*
Ga0126338_102642991	3300010030	Coral	VAIFRPTSSKVSVQKVLLCPFDCKPRPSGVSLESPGLQNILQVPENGAEVDENYDARNGLLAILSVLNLSRAIFRP*
Ga0126338_102726181	3300010030	Coral	KVSVQKVLLCPFHCKPRPSGVSIESPGLENILQVPGNGGEIDENYDACNGLSAILSVLNLSRAIFRR*
Ga0126338_102767831	3300010030	Coral	LCPFHCKPRPSGVSIESAGLENILQLSGNGAEDDENYDARNGLSAILSVLNLSMAIFRP*
Ga0126338_102801911	3300010030	Coral	VSVQKVVLCPFDCKPRQSGVNLESLELENILQVPGNGAEVDENYDARNGLSVILSVLNLSRAILR
Ga0126338_102828161	3300010030	Coral	VSVQKVLLCPFHCKPRPSGVSLESPRLENILQVPGNGAEVDENYDARNGLSAILSVLNLSRAIF
Ga0126338_102858501	3300010030	Coral	RNAVSATVLVFKLRVAIFRPTSSKVSVQKVVLGPFHPRARPSGVTLESAGLENNPQVPGNRAEVGQNYDGRKAVSATLSLLK*
Ga0126338_102919601	3300010030	Coral	VAIFRPTSSKVSVQKVLLCLFHCKPRPSGVSIESPGLENILQVPGNGAELEENYDARNGLSAILSVLNLSRAIFGP*
Ga0126338_102929492	3300010030	Coral	VRVQKVLLCPFDWKSRPSGVSLESPGLENFLQVPGNRAEVDQNHHARNGLSAILSVLNL
Ga0126338_102950692	3300010030	Coral	AIFRPTSSKVSVQKVLLCPFHCKPRPSGVSLESPGLENILQIVGNGAEGDENYDARNRLSAILSVLNLSRAIFRP*
Ga0126338_103016931	3300010030	Coral	VSVQKVLLCPFHWKPRPPGVSLESSGLENILQVPGKGAEVDENYDARNGLSAILSVLNLSRAIFRP*
Ga0126338_103095651	3300010030	Coral	VAIFRPTSSKVSVQIVLLCPFHCKPRPSGVSIESAGLENILQVPGKCAEVDENYDARNGLSAILSVLSLSRALFRP*
Ga0126338_103105971	3300010030	Coral	VSVQKVLLCPFHCKPRPSAVSLKSPGLENILQVPGNGAEVDENYDARNGLSAILSVLNLSRAI
Ga0126338_103125941	3300010030	Coral	VAIFRPTSAKVSVQKVLLCPFHCKPGPSGVSRESPGLENILQVPRNGAEVDENYDASNGLTAILSVLK*
Ga0126338_103206751	3300010030	Coral	MAIFRPTSSKVSVQKVLLCPFHCKPRQSGVSLESPELENILQVPGNGAEIDENYDARKGLSVILSVLNLSRAILRH*
Ga0126338_103211661	3300010030	Coral	VCVQKLVLCELHCKLWPSGVSLESPGLENILQVPGNRAEVDENYNARNGLSANLLVLNLSRAIFWP*
Ga0126338_103225221	3300010030	Coral	VAIFRPTSSKVSVQKVLLCPFDCKPMQSGVSLECPELENSLQVPGNGAELDENYDARNALSVILSVLNLSRAILRH*
Ga0126338_103296672	3300010030	Coral	VCVKKLVLFEFHCKPWPSGVSIESPGLENILQVPGNGAEVDENYDARNGLSAIFSVLNLSRAIFRP*
Ga0126338_103297821	3300010030	Coral	IFRPTSSKVSVQKVLLCPFHCKPRPSGVSIESPGLENILQGPGNGAEVDENYDGRNGLSAIFSVLNLSRAIFRP*
Ga0126338_103368561	3300010030	Coral	VAILRPTSSKVSIQKVLLSPFHCKPRPLGVSLESPGLENILQVPGNGAEVDENYDARDGLSAILSVLNLSRAIFRP*
Ga0126338_103446431	3300010030	Coral	SSKVSVQKVLLCPFHCKPRPSGLSLESPGLENILQVPGNCVDVDENHDARNGLSAILSVFNLSRAIFRP*
Ga0126338_103456381	3300010030	Coral	VSVQKVLLCPFHSK*RPPGISIESPGLENILQIPGYGAEVDENYDASNGLSAILSVLNLS
Ga0126338_103466961	3300010030	Coral	SVAIFRPTSSKVSVQKVLLCPFHCKPRPSGVSLESLGLENIPQVPRNPSENGQNHDARKAISATLSVLK*
Ga0126338_103552351	3300010030	Coral	VAIVRPTSSKVSVQKVLPSPFHCKPRPSGVSIESPGLENILQVPGNGAEVDENDDEPNGLSAILSVLNLSRRIFRP*
Ga0126336_104060262	3300010032	Coral	LLCPFHCKPRLSGVSIESPGLENIVQVQGNGAEVDENYDARNGLLAILSVLNLSRAIFRP
Ga0126339_102874451	3300010033	Coral	VPVQKLLLCPFHWKPRPSGVKLESPGLENILQVPGNRAEVDQNHHARNGLSAIISVLNLSRA
Ga0126339_103178412	3300010033	Coral	VSVQKVLLCPFHCKPRPSGVSRESPGLANILQVPGNGAEVDENYDARNGLSAILLVLNLSRVIFKP*
Ga0126339_104478571	3300010033	Coral	VGVQKVLLCPFHCKPRPSGVSIESPGLENILQIPGNSAVVDENYDAGNGLSAILSVLNLSRAIFRP*
Ga0126339_105177591	3300010033	Coral	GGLGYFFSIKVKWAIFRPRSLKVSVQKVLLSPFHYKPRPSGVSLESVGLENILQVPGNGAEVDENYDARNGLSAILSVLNLSRAIFRP*
Ga0126339_105617981	3300010033	Coral	AIFRPTSSKVSVQKVLLCPFHCKPRPSGVSLESPGLENILQIVGNGAEDDENYDARNRLSAILSVLNLSRAIFRP*
Ga0126339_105779551	3300010033	Coral	VSVEKVLLCPFHWKPRPSGVSLESLGLENILQVPEYRPEVCQTHDASKAVSATLSVLS
Ga0126339_105806861	3300010033	Coral	VSVQKALLCPFHWKPRPSGVSLESPGLENILQIPGNGAEVDENYDARNGLSAILSVFNLSTAIFRP*
Ga0126339_106158861	3300010033	Coral	VRIRKILLCPFHWKPRPSGVSLESPGLENILQVPGNRAEVDQNHHARNELSAILSVSNLS
Ga0126339_106347531	3300010033	Coral	VSVQKVLLCPFHCKPRPSGVSLESPGLENILQVPGNGAEVDENYDEGNGLSATLSVLNLSRAIFRP*
Ga0126339_107038931	3300010033	Coral	VRVQKVFLCPFHWKPRPSGVSLESPGLENIPLFAGNRAELSQNHDARQAVSATLSVLKLSGAIFRPISSKVSVQKVLCIH
Ga0126341_10212241	3300010394	Coral	KVRVQKVLLCPFHWKPRPSGVSLESPGLENILEVPGNRAAIGQNHDARKVVSATLSVLK*
Ga0126341_10257341	3300010394	Coral	VAIFRPTSSKVSVQKGLLCPFRCKPRPYGVSLESPGLESILQVPGNDAEVDEKYDARNGLSAILSVLNLSRAIFRP*
Ga0126341_10267401	3300010394	Coral	VAIFRPTNSKVSVEKVLLCPFHCKPRPSGVNLEYPGLENILQVPGNRAKVDENYDARNGLSAILSVLNLSKAIFRP*
Ga0126341_10481971	3300010394	Coral	VAIFKPTSSKVSVQKVLLCPFHCKARPSEVSSGSPGLENILQVLGNGAEVDENYDARNGLSANLSVLNLSRAIFRP*
Ga0126341_10723501	3300010394	Coral	VSVEKVLLCPFHCKPSPSGVSLESLGLENILQAPGNRAEVDENYDARNGLSAILSVLNLSRATFRPLRSKVSVQNVLLCL
Ga0126341_10786151	3300010394	Coral	MFRPTSSKVSVQKVFLCPFHWKPRPSGVSLESPGLESILQVPGNGAEVDENYDARNGLSAILSVLNLSRAIF
Ga0126341_10891831	3300010394	Coral	VRVQKVLLCPFHCKPRQSGVSLESPGLDNILQVPGNGAEVDENYDARNGLSAILSVLNLSRAI
Ga0126341_11030351	3300010394	Coral	VSVQKVLLSPSHCKPWPSRVSLESLGLENILQVPGNGAEVDENYDARNGLSAILSVLNISRAIFRP*
Ga0126341_11138181	3300010394	Coral	VYVQKLVLCEFHCKPWPSGVSSESPGLENILQVPGNRAEVDENYDARNGLSATLSVLNLSRAIFRP*
Ga0126341_11338721	3300010394	Coral	VAIFRPTSSKVIVQKVLLCPFHSKPRPSGVSLESPGLENILQVPGNGAEVDENYDARNGLSAILSVLNLSRAIFRPRSSRPGVR*
Ga0126341_11606051	3300010394	Coral	MAIFRPTTWKVSVQKVLLSPFHCKPRPSGVRLETPGLENILQIPGNGAEVDENYDARNGLSAILSVLNLGRAIFRP*
Ga0126341_11686701	3300010394	Coral	VRVQKVLLCPFHWKPRPLGVSLESPGLENILQVPGNRAEVDQNHHARNGLSAILSVLNL
Ga0126341_11711261	3300010394	Coral	VRVQKVLLCPFHWKPRPSGVSLESPGVENIFQVHGNRAEVDQNHHARNGLSAILSVLNLSRAI
Ga0126341_11740991	3300010394	Coral	VSVQKLLLCPFHCKPRPSRVIIESPGLENILQVPGNGAELDENYDARNGLSAILSVLNLSRAIF
Ga0126341_11776451	3300010394	Coral	HNVLLCQFQCKARRSGVGLESPGLENIFQVPGNGAEVDENYDARNGLSAILSVLNLRLKE
Ga0126341_11835701	3300010394	Coral	LSVQKVLLGPFYWKPRPSGVSLEFPGLENILQVPGNGAEVDENYDAGNGLSAILSVSNLSRA*
Ga0126341_11873331	3300010394	Coral	PFHCKPRPSGVSIESPGLENILQVPGNGAEVDENYDARNGLSAILSVLNLSRAIFRP*
Ga0126341_11904831	3300010394	Coral	VCVQKLVLCAFHCKAWPSGVSLESPGLENILQVPGNGAEVDENYDARNGLSAILAVLNLSRVYFGPEARR*
Ga0126341_11940381	3300010394	Coral	QKALLCPFHCKPRPPGVSLESPVLENILEVPGNGPEVDENYHARNGLSAILSGLNLSRAIFRP*
Ga0126341_12003081	3300010394	Coral	VAIFRPTSSKVRVQKLLLCPFHCKPRQSGVSLESPGLETILQVPGNGAEVDENYDARNGLSAILSVLNLSRA
Ga0126341_12017312	3300010394	Coral	MPRSSKVSVQKVLLCPFHWKPRPSGVSIESAGLENILQVPGNGAEVDENYDARNGLSAILSVLNLSRA
Ga0126341_12050022	3300010394	Coral	VAIFRPTSSKVSVQKVLLCPFHCKPRPSGVSIESPGLETILRVPGNGAEVDENYDARNAVSATVSLLK*
Ga0126341_12084221	3300010394	Coral	VRIQKVLLCPFHWKPRPSGVILDSPGLENILQVPGNRAEVDQNHHARNGLSAILSVLNLS
Ga0126341_12122101	3300010394	Coral	SVAIFRPTSSKLSVQTVLLCKFHCKPRPSGVSIESPGPENILQAPGNGAEIDENYDARNGLSAVLSVLNLSRVIFRP*
Ga0126341_12154451	3300010394	Coral	SKVCVQKVLLCPFHCKPRPSGVSIESPGLENILQMPGKGAEVDENYDARNWLSAILSVLNLSRALFRP*
Ga0126341_12157692	3300010394	Coral	VAIFRPRSAKLSVQKVLLCPFHCKPRPSGVSIDAPGLENILQVPGNGAEVDQNYDARNGLSAILSVLNLSRAIS
Ga0126341_12201181	3300010394	Coral	NGLSAILSVLNLSRAIFRPTSSKVSVQKVLLCPFHCKPRPSRVILESPGLENILQVPGNGTEVYENYDARNGLSAILSVLNLSRAIFQP*
Ga0126341_12282841	3300010394	Coral	VAIFRPASSKVSLEKVLLCPFHCKPRRSGVSLESPGLENILQVPVKGAEVDENYDARNGLSAILSVLNLSRAIFRP*
Ga0126341_12322441	3300010394	Coral	LLCPFHCKPRPSGLSIESPGLENILQVPGNGAEVDENYDARNGLSVILSVLNLS
Ga0126341_12342041	3300010394	Coral	VSVKKVLLCPFHCKPWPSGVSLESPGLEVILQAPGKGAEVDENHDARNGLSAIPLVLNLSRAIFGP*
Ga0126341_12371111	3300010394	Coral	SVAIFRPTSSKVSVQKVLLCLFHCKPRHLGVSMESPGLENILEVPGNGAEVDENYDACNRVSAFLSVLK*
Ga0126341_12386191	3300010394	Coral	VAIFRPTSSKVRVQKVLLCPFHCKPRPSGVRLESPGLEIILQVPGNGAEVDENYDARNGLSAILSVLNLSRAIFRP*
Ga0126341_12433671	3300010394	Coral	KPRPSGVSLESPGLENILQVPGNGAEVDENYDARNVLSAILTVLNLSRAIFRP*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085126

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences