Metagenome / Metatranscriptome Family F084700

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084700
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	68 residues
Representative Sequence	MTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAVVVEDSVQRVYDQVNELMKKLAD
Number of Associated Samples	92
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.18 %
% of genes near scaffold ends (potentially truncated)	16.96 %
% of genes from short scaffolds (< 2000 bps)	69.64 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.179 % of family members)
Environment Ontology (ENVO)	Unclassified (30.357 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.393 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.35% β-sheet: 0.00% Coil/Unstructured: 45.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.47.1.1: STAT	d1uura1	1uur	0.94314
a.47.2.1: t-snare proteins	d1fioa_	1fio	0.91375
f.5.1.0: automated matches	d5azsa_	5azs	0.91169
a.183.1.1: Nop domain	d2ozbb1	2ozb	0.90721
a.2.7.1: Seryl-tRNA synthetase (SerRS)	d1seta1	1set	0.90542

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF13305	TetR_C_33	16.96
PF00440	TetR_N	16.07
PF11253	DUF3052	14.29
PF04389	Peptidase_M28	4.46
PF00005	ABC_tran	2.68
PF01869	BcrAD_BadFG	1.79
PF16576	HlyD_D23	1.79
PF00313	CSD	1.79
PF12704	MacB_PCD	1.79
PF03435	Sacchrp_dh_NADP	0.89
PF12706	Lactamase_B_2	0.89
PF07676	PD40	0.89
PF02153	PDH_N	0.89
PF12740	Chlorophyllase2	0.89
PF13505	OMP_b-brl	0.89
PF13669	Glyoxalase_4	0.89
PF01425	Amidase	0.89
PF12698	ABC2_membrane_3	0.89
PF13185	GAF_2	0.89
PF08818	DUF1801	0.89
PF09586	YfhO	0.89
PF00854	PTR2	0.89
PF04403	PqiA	0.89
PF13602	ADH_zinc_N_2	0.89
PF00275	EPSP_synthase	0.89
PF07498	Rho_N	0.89
PF04055	Radical_SAM	0.89
PF13519	VWA_2	0.89
PF00072	Response_reg	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.89
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.89
COG2995	Intermembrane transporter PqiABC subunit PqiA	Cell wall/membrane/envelope biogenesis [M]	0.89
COG3104	Dipeptide/tripeptide permease	Amino acid transport and metabolism [E]	0.89
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.89
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.57 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	31.25 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.57 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.25 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.57 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.25 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.25 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.79 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.25 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.89 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.89 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.25 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	0.89 %
Cystobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter	0.89 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.25 %
Cystobacter fuscus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter → Cystobacter fuscus	0.89 %
Myxococcus fulvus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus fulvus	0.89 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.89 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_10387655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
2209111000\|2209811614	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300000956\|JGI10216J12902_103535011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300000956\|JGI10216J12902_115806426	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300003315\|P22013IDBA_10000958	All Organisms → cellular organisms → Bacteria	19627	Open in IMG/M
3300004071\|Ga0055486_10102303	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300004157\|Ga0062590_101975732	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300004463\|Ga0063356_100574080	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300004463\|Ga0063356_105187567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300005293\|Ga0065715_10305885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300005295\|Ga0065707_10095679	All Organisms → cellular organisms → Bacteria	3346	Open in IMG/M
3300005327\|Ga0070658_10178382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1787	Open in IMG/M
3300005334\|Ga0068869_101010932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300005340\|Ga0070689_100174826	All Organisms → cellular organisms → Bacteria	1741	Open in IMG/M
3300005340\|Ga0070689_101506609	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300005343\|Ga0070687_100000623	All Organisms → cellular organisms → Bacteria	11721	Open in IMG/M
3300005441\|Ga0070700_100872094	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300005545\|Ga0070695_101034697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300005615\|Ga0070702_100051208	All Organisms → cellular organisms → Bacteria	2363	Open in IMG/M
3300005836\|Ga0074470_10532020	All Organisms → cellular organisms → Bacteria	52051	Open in IMG/M
3300006169\|Ga0082029_1111048	All Organisms → cellular organisms → Bacteria	52869	Open in IMG/M
3300006755\|Ga0079222_10441613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300006844\|Ga0075428_100260516	All Organisms → cellular organisms → Bacteria	1867	Open in IMG/M
3300006845\|Ga0075421_100000365	All Organisms → cellular organisms → Bacteria	45927	Open in IMG/M
3300006845\|Ga0075421_100157722	All Organisms → cellular organisms → Bacteria	2833	Open in IMG/M
3300006854\|Ga0075425_100003834	All Organisms → cellular organisms → Bacteria	15373	Open in IMG/M
3300006894\|Ga0079215_10033561	All Organisms → cellular organisms → Bacteria	1858	Open in IMG/M
3300007004\|Ga0079218_10720055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300007004\|Ga0079218_11560860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300007004\|Ga0079218_13617981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300009087\|Ga0105107_10492863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300009094\|Ga0111539_10000033	All Organisms → cellular organisms → Bacteria	154510	Open in IMG/M
3300009100\|Ga0075418_10748224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1055	Open in IMG/M
3300009840\|Ga0126313_11208316	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300010044\|Ga0126310_10660148	All Organisms → cellular organisms → Bacteria → Acidobacteria	787	Open in IMG/M
3300010044\|Ga0126310_10671444	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300010044\|Ga0126310_11489633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300010045\|Ga0126311_10404388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1051	Open in IMG/M
3300010045\|Ga0126311_10848580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300010391\|Ga0136847_13625766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300010399\|Ga0134127_12047808	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300011413\|Ga0137333_1113401	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300011425\|Ga0137441_1046848	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300011427\|Ga0137448_1010596	All Organisms → cellular organisms → Bacteria	1950	Open in IMG/M
3300011427\|Ga0137448_1109323	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300012041\|Ga0137430_1240141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300014325\|Ga0163163_10908495	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300014487\|Ga0182000_10057139	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1188	Open in IMG/M
3300014745\|Ga0157377_10098645	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300017965\|Ga0190266_10545580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300018422\|Ga0190265_10276844	All Organisms → cellular organisms → Bacteria → Acidobacteria	1738	Open in IMG/M
3300018429\|Ga0190272_10000002	All Organisms → cellular organisms → Bacteria	272849	Open in IMG/M
3300018432\|Ga0190275_10000549	All Organisms → cellular organisms → Bacteria	32157	Open in IMG/M
3300018465\|Ga0190269_10026781	All Organisms → cellular organisms → Bacteria → Acidobacteria	2607	Open in IMG/M
3300018466\|Ga0190268_10106125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1320	Open in IMG/M
3300018466\|Ga0190268_11144818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300018469\|Ga0190270_10000026	All Organisms → cellular organisms → Bacteria	105045	Open in IMG/M
3300018469\|Ga0190270_10264983	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300018469\|Ga0190270_11892703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300018469\|Ga0190270_12348947	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300018476\|Ga0190274_10500627	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300018946\|Ga0193599_1203396	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300019767\|Ga0190267_10301964	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus fulvus	830	Open in IMG/M
3300020146\|Ga0196977_1000038	All Organisms → cellular organisms → Bacteria	95501	Open in IMG/M
3300020147\|Ga0196976_1001011	All Organisms → cellular organisms → Bacteria	14431	Open in IMG/M
3300020154\|Ga0196965_1061953	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300020202\|Ga0196964_10220497	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300020215\|Ga0196963_10361078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300021067\|Ga0196978_1015203	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300021067\|Ga0196978_1023109	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1145	Open in IMG/M
3300021290\|Ga0213902_105838	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300021358\|Ga0213873_10000001	All Organisms → cellular organisms → Bacteria	1657979	Open in IMG/M
3300021968\|Ga0193698_1002460	All Organisms → cellular organisms → Bacteria	2230	Open in IMG/M
3300023062\|Ga0247791_1083186	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300024426\|Ga0196960_10003754	All Organisms → cellular organisms → Bacteria	3883	Open in IMG/M
3300025324\|Ga0209640_10102577	All Organisms → cellular organisms → Bacteria	2467	Open in IMG/M
3300025918\|Ga0207662_10001328	All Organisms → cellular organisms → Bacteria	11926	Open in IMG/M
3300025936\|Ga0207670_10698153	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300025936\|Ga0207670_10964257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300025936\|Ga0207670_11061347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300025942\|Ga0207689_10815605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300026075\|Ga0207708_10531845	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300027075\|Ga0214467_1033019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300027691\|Ga0209485_1160844	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300027907\|Ga0207428_10000001	All Organisms → cellular organisms → Bacteria	1034622	Open in IMG/M
3300027909\|Ga0209382_10000513	All Organisms → cellular organisms → Bacteria	64059	Open in IMG/M
3300027909\|Ga0209382_10306620	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300027992\|Ga0247750_1009822	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300028578\|Ga0272482_10259418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300030510\|Ga0268243_1037589	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300030533\|Ga0247632_1004181	All Organisms → cellular organisms → Bacteria → Acidobacteria	810	Open in IMG/M
3300031164\|Ga0307502_10026606	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300031455\|Ga0307505_10000989	All Organisms → cellular organisms → Bacteria	26016	Open in IMG/M
3300031548\|Ga0307408_102048962	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300031740\|Ga0307468_100000986	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	7806	Open in IMG/M
3300031911\|Ga0307412_11822017	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300032002\|Ga0307416_100473592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1311	Open in IMG/M
3300032075\|Ga0310890_11401428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300034008\|Ga0334942_001701	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter → Cystobacter fuscus	7772	Open in IMG/M
3300034027\|Ga0334949_008772	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3278	Open in IMG/M
3300034139\|Ga0334956_000155	All Organisms → cellular organisms → Bacteria	30395	Open in IMG/M
3300034139\|Ga0334956_050609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300034145\|Ga0334963_000185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32500	Open in IMG/M
3300034146\|Ga0334964_000024	All Organisms → cellular organisms → Bacteria	158061	Open in IMG/M
3300034173\|Ga0334925_000009	All Organisms → cellular organisms → Bacteria	219628	Open in IMG/M
3300034194\|Ga0370499_0018468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1601	Open in IMG/M
3300034251\|Ga0334947_068659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300034377\|Ga0334931_042189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1004	Open in IMG/M
3300034760\|Ga0334948_001252	All Organisms → cellular organisms → Bacteria	9552	Open in IMG/M
3300034760\|Ga0334948_002269	All Organisms → cellular organisms → Bacteria	6656	Open in IMG/M
3300034779\|Ga0334945_024792	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300034781\|Ga0334935_000797	All Organisms → cellular organisms → Bacteria	12299	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.36%
Host-Associated	Host-Associated	19.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.32%
Plants	Host-Associated → Plants	19.64%
Aquatic	Environmental → Aquatic	8.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.39%
Sediment	Environmental → Aquatic → Sediment	5.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.36%
Freshwater	Environmental → Aquatic → Freshwater	1.79%
Marine	Environmental → Aquatic → Marine	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.50%
Loam	Environmental → Terrestrial → Soil → Loam	10.71%
Sand	Environmental → Terrestrial → Soil → Sand	8.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.36%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	5.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Lake	Environmental → Aquatic → Freshwater → Lake	0.89%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.82%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	8.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.04%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.36%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	5.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.79%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.89%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.18%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.04%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	7.14%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	6.25%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	6.25%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.36%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.46%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	4.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.89%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.89%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
2209111000	Soil microbial communities from Colorado Plateau, Greene Butte sample - Dark Crust, Colorado Plateau, Green Butte	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003315	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P2 sample	Environmental	Open in IMG/M
3300004071	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011413	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT231_2	Environmental	Open in IMG/M
3300011425	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018946	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300020147	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5-13C	Environmental	Open in IMG/M
3300020154	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_20	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021067	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20-13C	Environmental	Open in IMG/M
3300021290	Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hobet_Cave_2	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300023062	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4	Environmental	Open in IMG/M
3300024426	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027075	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0 HiSeq	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027992	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S125-311R-5	Environmental	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030533	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bb9 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300034008	Biocrust microbial communities from Mojave Desert, California, United States - 38SMC	Environmental	Open in IMG/M
3300034027	Biocrust microbial communities from Mojave Desert, California, United States - 45SNC	Environmental	Open in IMG/M
3300034139	Biocrust microbial communities from Mojave Desert, California, United States - 52SNC	Environmental	Open in IMG/M
3300034145	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 59SNS	Environmental	Open in IMG/M
3300034146	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 60SNS	Environmental	Open in IMG/M
3300034173	Biocrust microbial communities from Mojave Desert, California, United States - 21HNC	Environmental	Open in IMG/M
3300034194	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_17	Environmental	Open in IMG/M
3300034251	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 43SMS	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034760	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 44SMS	Environmental	Open in IMG/M
3300034779	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 41SMS	Environmental	Open in IMG/M
3300034781	Biocrust microbial communities from Mojave Desert, California, United States - 31SMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0826.00004300	2162886012	Miscanthus Rhizosphere	LVRVNDKLHYEIDATTAVHLPMSERVLDRLADILFATDEILGMLRVPERLPDDTSVTIESSVQSVYDQ
2209916263	2209111000	Soil	ERVLDKLADILFATDEILDMIRVEERLPDATTVVVEDSVQRVYDQVNELMKKLAD
JGI10216J12902_1035350112	3300000956	Soil	MTAVHLPMSERVLDKLADILFATDEILDMIRIGERPPDATTVAVESSVQRVYDQVNELMKKLAD*
JGI10216J12902_1158064261	3300000956	Soil	MNKAQIEFDAVNAVYLPMSERVLDKLADILLATDEILDMIRVEERLLDPTSVTVEMSVQKVYDEVNELMKKLVD*
P22013IDBA_1000095817	3300003315	Ore Pile And Mine Drainage Contaminated Soil	MTAMHLPMSERVLDRLADILLATDEILGMLRVPERLPDPITAEIETSVREVYDQVNELMKQLSD*
Ga0055486_101023032	3300004071	Natural And Restored Wetlands	FDAMSAVHLPMSERVLDKLADILFATDEILDMIHVEDHLPDDTTAVVEESVQILYNQVNELMKKLSD*
Ga0062590_1019757322	3300004157	Soil	LLSRVNDKAAFEMNAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD*
Ga0063356_1005740801	3300004463	Arabidopsis Thaliana Rhizosphere	MTSVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTTVAVESSVQHVYDQINELMK
Ga0063356_1051875671	3300004463	Arabidopsis Thaliana Rhizosphere	VNEKITFEIDSTTAVHLPMSERVLDKLADIMLATDEILGMLRTPERVPDSTSVSVESSMQRVYEEVNELMKKLSD*
Ga0065715_103058851	3300005293	Miscanthus Rhizosphere	MSERVLDRLADILFATDEILGMLRVPERLPDDTSVTIESSVQSVYDQ
Ga0065707_100956794	3300005295	Switchgrass Rhizosphere	VNDKVAIEMDTMSAVYLPMSERVLDKLADILFATDEILDMIRVEERAPDATTVVVESSVQRVYDQINELMKKLAD*
Ga0070658_101783821	3300005327	Corn Rhizosphere	MRAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVVVESSVKRVYDQINELMKKLAD*
Ga0068869_1010109322	3300005334	Miscanthus Rhizosphere	LVRVNDKVPFDFDAMTAVHLPMSERVLDKLADILFATDEILGMIQVEERLPDPTAVVVESSIRSVYEQVNELMKQLSD*
Ga0070689_1001748261	3300005340	Switchgrass Rhizosphere	MSERVLDRLADILFASDEILDMIRVRERAPDATIVVVEESVQLVYDQVNELMKKLSD*
Ga0070689_1015066091	3300005340	Switchgrass Rhizosphere	MSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVENSVQGVYDQINELMKKLAD*
Ga0070687_1000006233	3300005343	Switchgrass Rhizosphere	VNYKAPIEFDAISAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVVVESSVQRVYDQINDLMKKLAD*
Ga0070700_1008720941	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	NRVNDKVAIEMDTMSAVYLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAY*
Ga0070695_1010346972	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MNAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD*
Ga0070702_1000512083	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VNQKVQPFEIDAIHAVHLPMSERVLDRLADILFATDEILDMVRVEERLPDPTAVVVEASMQRVYEQVNELMKQLAD*
Ga0074470_105320207	3300005836	Sediment (Intertidal)	MSAVHLPMSERVLDKLADILFATDEILDMIRTEERLPDDRTVEVEASVQIMYNQVNELMMRLSD*
Ga0082029_111104813	3300006169	Termite Nest	MNKAHLEFDAMNAVHLPMSERVLDKLADILFATDEILDMIRVEERLLDPTTVVVEDSVQKVYDQVNELMKRLVD*
Ga0079222_104416131	3300006755	Agricultural Soil	MTAVYLPMSERVLDKLADILFATDEILDMIRVEERIPDPTTAFVDRSVRAVYDQINELMKKLAD*
Ga0075428_1002605162	3300006844	Populus Rhizosphere	VNYKASIEIDPVTALHLPMSERVLDKLADILFATDELLDMIRVEERLPDPTTVVVEDSVQRVYDQINELMKKLSD*
Ga0075421_10000036528	3300006845	Populus Rhizosphere	MSERVLDKLADILFATDEILGLIRVEERMPDATTVFIETSVQSVYDQVNELMKRLAD*
Ga0075421_1001577222	3300006845	Populus Rhizosphere	VNYKASIEFDPVTALHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTEVVEASVQHVYDQINELMKKLSD*
Ga0075425_10000383410	3300006854	Populus Rhizosphere	VSYKLAEIDVMHAVHLPVSERVLDKLADILFATDEILDMLHVDEHMPDDTTVEVEQSVRVVYDQVNELMKKLCD*
Ga0079215_100335612	3300006894	Agricultural Soil	MNKAPIEFDAVDAVYLPMSERVLDKLADILLATDEILDMIRVEERLLDPTSVTVETSVQKVYDEVNELMQKLVD*
Ga0079218_107200552	3300007004	Agricultural Soil	VNQKAYIEIDTTTAVHLPMSERVLDKLADILFATDEILGLIRVEERMPDATTVFIESSVQIVYDQVNELMKRLAD*
Ga0079218_115608602	3300007004	Agricultural Soil	MDKLADILFATDEILDMIRVEERLPDATTVTVERSVQSVYDQINELMKKLAD*
Ga0079218_136179811	3300007004	Agricultural Soil	MSAVHLPMSERVLDKLADIIFASDEILDMIRMEERLPDPTTVVVEASVKNVYDQINELMKKLAD*
Ga0105107_104928633	3300009087	Freshwater Sediment	MSVHKSLLCRVNYKAPIEIDTTTAVHLPTSERVLDKLADILFATDEILGMVRMEERLPDATTVFIEESVQSVYNQVNELMKRLAD*
Ga0111539_1000003348	3300009094	Populus Rhizosphere	MDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVENSVQGVYDQINELMKKLAD*
Ga0075418_107482242	3300009100	Populus Rhizosphere	LVRVNDKLHYEIDATTAVHLPMSERVLDRLADILFATDEILGMLRVPERLPDDTSVTIESSVQRVYDQVNELMKKLSD*
Ga0126313_112083162	3300009840	Serpentine Soil	VNYKAHIEIDAMTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAMVVGDSVQRVY
Ga0126310_106601482	3300010044	Serpentine Soil	VNVKLQEFDVMTAVQLPISERVLDRLADILFATDEILDLLDRDEGFPIDTTVDVEKSVRDVYDQVNELMKKLAD*
Ga0126310_106714441	3300010044	Serpentine Soil	RLADILFATDEILDLLDRDEGFPIDTTVDVEKSVRDVYDQVNELMKKLAD*
Ga0126310_114896331	3300010044	Serpentine Soil	DATTAVHLPMSERVLDKLADILFATDEILGMLKIPERLPDSTSVVIESSVQSIYEQVNELMKKLSD*
Ga0126311_104043882	3300010045	Serpentine Soil	MTAVHLPMSERVLDKLADILFATDEILDMIRVEDRLPDPTAVVVEDSVQRVYDQINELMKKLVD*
Ga0126311_108485802	3300010045	Serpentine Soil	VNQKATIEFDAMNAVHLPMSERVLDKLADILFATDEILDMIRVEERLLDPTTVVVEERVQQVYDQVNELMKRL
Ga0136847_136257662	3300010391	Freshwater Sediment	VIVKLQEFDVMTAIQLPISERVLDRLADILFATDEILDMIDRDERSPSDTTLDVEKSVREVYDQVNELMKKLAD*
Ga0134127_120478081	3300010399	Terrestrial Soil	VNDKAAFEMNAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD*
Ga0137333_11134012	3300011413	Soil	VNQKAYIEIDTTTAVHLPMSERVLDKLADILFATDEILGLIRVEERMPDATTVFVEESVQSVYDQVNELMKRLAD*
Ga0137441_10468482	3300011425	Soil	MSERVLDKLADILFATDEILDMIRVEERLPDPTTVAVESSVQGVYDQINELMKKLAD*
Ga0137448_10105963	3300011427	Soil	VNQKVQLFEIDAMHAIHLPMSERVLDKLADILFATDEILDMVRVEERLPDPTSVTVETSMQRVYEQVNELMKQLAD*
Ga0137448_11093231	3300011427	Soil	MDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD*
Ga0137430_12401411	3300012041	Soil	VNYKAAFEMDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD*
Ga0163163_109084952	3300014325	Switchgrass Rhizosphere	VNYKALAFDPITAVHLPVSERVLDKLADILFATDEILDMLKTDERYLNETTVAVGESVRSVYDQVNDLMKQLSD*
Ga0182000_100571392	3300014487	Soil	VTYKAAIEFDAMTAVHLPMSERVLDKLADILFATDEILDIIRVEQRLPDETAVVVEKSVQSVYDQINALMKRLSD*
Ga0157377_100986453	3300014745	Miscanthus Rhizosphere	VNYKALTEIDAMTAVYLPMSERVLDKLADILFATDEILDMIRVEEQLPDPTAVVVGDSVQRVYDQINELMKKLAD*
Ga0190266_105455802	3300017965	Soil	MRAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAVTVGKSVQSVYDQINELMKKLAD
Ga0190265_102768443	3300018422	Soil	MSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQSVYDQINDLMKKLAD
Ga0190272_1000000247	3300018429	Soil	VNEKVSYEIDATTAIHLPMSERVLDKLADILFATDEILGMVRPDEERMPDPSMASIETSMQSVYDQVNELMKRLSD
Ga0190275_1000054926	3300018432	Soil	MSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTTVVVEASVRHVYDQINELMKKLVD
Ga0190269_100267813	3300018465	Soil	MTAVHLPMSERVLDKLADILFATDEILDMIKVEERMPDPTAVVVEDSVRSVYDQINELMKKLAD
Ga0190268_101061252	3300018466	Soil	VNDKVPYEFDVTTAIHLPMSERVLDKLADILYATDEILGMVQTPERLPDASMTSVEMSMQRVYEQVNELMKQLSD
Ga0190268_111448182	3300018466	Soil	MTAVHLPMSERVLDKLADILFATDELLDMIRVEERLPDATTEVVEASVQSVYDQINELMK
Ga0190270_1000002687	3300018469	Soil	MTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTTVVVEDSVQRVYDQINELMKKLVD
Ga0190270_102649832	3300018469	Soil	MRAVHLPMSERVLDKLADILFATDEILDMIRVEERMPDATAVVVESSVQNVYDQINELMKKLAD
Ga0190270_118927031	3300018469	Soil	MSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVECSVQGVYDQINELMKKLAD
Ga0190270_123489471	3300018469	Soil	RVNDKALYEIDATTAIHLPMSERVLDKLADILFATDEILGMLRVPERLPDSTSVTIESSMQSVYDEVNELMKKLSD
Ga0190274_105006272	3300018476	Soil	MDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQSVYDQINELMKKLAD
Ga0193599_12033961	3300018946	Soil	TTALHLPVSERVLDKLADILLASDDILGMIRNEERLPDPTVAAVEDSVQHVYNQINELMKQLVD
Ga0190267_103019642	3300019767	Soil	LRVGTSGYKSLLCRVNDKVPYEVDVTTAIHLPMSERVLDKLADILYATDEILGMVQTPERLPDASMTSVEMSMQRVYEQVNELMKQLSD
Ga0196977_10000387	3300020146	Soil	MTAVHLPMSERVLDKLADILFATDEILDMIRIGERPPDATTVVVESSVQRVYDQVNELMKKLAD
Ga0196976_10010113	3300020147	Soil	MSERVLDKLADILFATDEILGMLRVPERLPDSTSVVIEASVQSVYDEVNELMKKLSD
Ga0196965_10619532	3300020154	Soil	MTAVHLPMSERVLDKLADILFATDEILDMIKIEERLPDATTVVVEASVKSVYDQVNELMKKLAD
Ga0196964_102204972	3300020202	Soil	VNHKAFTEIDTTTAVHLPTSERVLDKLADILFATDEILGMVRMEERMPDATTVFIEESVQSVYDQVNELMKRLSD
Ga0196963_103610782	3300020215	Soil	VNQKAQIEIDTTTAVHLPTSERVLDKLADILFATDEILGIVRVEERMPDATTVFIEEAVQSVYDQVNELMKRLSD
Ga0196978_10152032	3300021067	Soil	VNDKVPFEIDATTAVHLPMSERVLDKLADILFATDEILGMLRVPERLPDSTSVVIEASVQSVYDEVNELMKKLSD
Ga0196978_10231091	3300021067	Soil	RVLDKLADILFATDEILDMIRVEERLPDPTTVAVETSVQRLYDQVNELMKKLAD
Ga0213902_1058381	3300021290	Soil	VKLQEFDVMTAVQLPISERVLDRLADILFATDEILDMLDRDEGYPIDTTVDVGKSVRNVYDQVNELMKKLAD
Ga0213873_100000011118	3300021358	Rhizosphere	MSERVLDKLADILFATDEILDMLHVDEDRVPDDTSVVVEASVKHVYDQVNELMKKLTD
Ga0193698_10024602	3300021968	Soil	MHTMSAVYLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQSVYDQINELMKKLAD
Ga0247791_10831861	3300023062	Soil	IDAMTAVHLPMSERVLDKLADILFATDEILDMIRVEEQLPDPTAQVVGASVQQVYDQINELMKKLAD
Ga0196960_100037543	3300024426	Soil	MTAVHLPMSERVLDKLADILFATDEILDMIRVEDRLPDPTAMAVGDSVQQVYDQINELMKKLAD
Ga0209640_101025772	3300025324	Soil	MQAIHLPMSERVLDKLADILFATDEILDMVRVEERLPDPTSVVVETSMQRVYEQVNELMKQLAD
Ga0207662_1000132812	3300025918	Switchgrass Rhizosphere	MSERVLDKLADILFATDEILDMIRVEERLPDATTVVVESSVQRVYDQINDLMKKLAD
Ga0207670_106981532	3300025936	Switchgrass Rhizosphere	MSERVLDRLADILFASDEILDMIRVRERAPDATIVVVEESVQLVYDQVNELMKKLSD
Ga0207670_109642571	3300025936	Switchgrass Rhizosphere	VNDKVPFDFDAMTAVHLPMSERVLDKLADILFATDEILGMIRVEEKLPDPTTVAVESSMQSVYEQVNELMKQLSD
Ga0207670_110613471	3300025936	Switchgrass Rhizosphere	MRAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVVVESSVKRVYDQINELMKKLAD
Ga0207689_108156051	3300025942	Miscanthus Rhizosphere	MSERVLDKLADILFATDEILGMIQVEERLPDPTAVVVESSIRSVYEQVNELMKQLSD
Ga0207708_105318451	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	NRVNDKVAIEMDTMSAVYLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVADESSVQGVYDQINELMKKLAD
Ga0214467_10330191	3300027075	Soil	VNYKAPIEIDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERPPDATAAVVQGAVQNVYDQVNELMKKLAD
Ga0209485_11608442	3300027691	Agricultural Soil	MNKAPIEFDAVDAVYLPMSERVLDKLADILLATDEILDMIRVEERLLDPTSVTVETSVQKVYDEVNELMQKLVD
Ga0207428_10000001104	3300027907	Populus Rhizosphere	MSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVENSVQGVYDQINELMKKLAD
Ga0209382_1000051357	3300027909	Populus Rhizosphere	MSERVLDKLADILFATDEILGLIRVEERMPDATTVFIETSVQSVYDQVNELMKRLAD
Ga0209382_103066201	3300027909	Populus Rhizosphere	VNYKASIEFDPVTALHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTEVVEASVQHVYDQINELMKKLSD
Ga0247750_10098222	3300027992	Soil	MTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAAVVGDSVQRVYDQINELMKKLAD
Ga0272482_102594182	3300028578	Soil	MSAVHLPMSERVLDKLADILFATDEILDMIRVEDRLLDPTTVVVEESVQAVYDQVNELMKKLVD
Ga0268243_10375892	3300030510	Soil	MTAVHLPMSERVLDKLADILFATDEILDIIRVEQRLPDETAVVVEKSVQSVYDQINALMKRLSD
Ga0247632_10041812	3300030533	Soil	MNKAPIEFDAMSAVHLPISERVLDKLADILFATDEILDMIRVEERVLDHTSVVVETSVQKVYDQVNELMKRLVD
Ga0307502_100266062	3300031164	Soil	MRAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAVTVASSVQSVYDQINELMKKLAD
Ga0307505_100009896	3300031455	Soil	MTAVHIPMSERVLDKLADILYATDELLSLVRVEERLPDSTTRVVEQSMQRVYEQINELMKRFSD
Ga0307408_1020489622	3300031548	Rhizosphere	MNKALLEFDAMNAVHLPMSERVLDKLADILFATDEILDMIRVEERLFDPTTVVVESSVQQVYDQVNELMKKLVD
Ga0307468_1000009868	3300031740	Hardwood Forest Soil	VKPQEFDAMTAIQLPISERVLDRLADILFATDEILDMINRNERVPDDTTLDVEQSVRMVYDQVNELMKKLAD
Ga0307412_118220172	3300031911	Rhizosphere	MNAAHLPMSERVLDKLADILFATDEILDMIRVEERLLDPTTVVVEESVQQVYDQVNELMKKLVD
Ga0307416_1004735922	3300032002	Rhizosphere	MTAVHLPMSERVLDKLADILFATDEILGLVCPEERMPDETAVVVEESMRRVYDQINDLMKRLSD
Ga0310890_114014282	3300032075	Soil	LSRVNAKAAIEFDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATAVVVESSVQNVYDQINELMKKLAD
Ga0334942_001701_4611_4841	3300034008	Biocrust	VNDKVPYEIDATTAIHLPMSERVLDRLADILLATDEILGMVRPDEERMPDPSMATVETSIQSVYDQVNELMKQLSD
Ga0334949_008772_1095_1268	3300034027	Biocrust	MSERVLDKLADILFATDEILDMIRVEERLPDATTVVVEDSVQRVYDQINELMKKLAD
Ga0334956_000155_16526_16750	3300034139	Biocrust	VHKTILQFDPMTAIQLPLSERVLDRLADILFATDEILDMIHMDEVLPDSTTQEVEASVRHVYDRVNELMKKLAD
Ga0334956_050609_172_366	3300034139	Biocrust	MTAVHLPMSERVLDKLADILFATDEILDMIRVEERAPDPTTVVVEDSVQRVYDQINELMKKLAD
Ga0334963_000185_25666_25860	3300034145	Sub-Biocrust Soil	MTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAVVVEDSVQRVYDQVNELMKKLAD
Ga0334964_000024_53777_53998	3300034146	Sub-Biocrust Soil	VKYQALEFDAMTAVHLPMSERVLDKLADILFATDEILDMLQMEEQLPSPASSVEESVRSVYDQVNELMKQLAD
Ga0334925_000009_58647_58868	3300034173	Hypolithic Biocrust	MKALEFDAMTAVHLPMSERVLDKLADILFATDEILDMLRLQEERLPDDTTTAVEESVKHVYEQVNELMKKLTD
Ga0370499_0018468_1053_1226	3300034194	Untreated Peat Soil	MSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD
Ga0334947_068659_281_475	3300034251	Sub-Biocrust Soil	MNAVHLPLSERVLDRLADILFASDEILDMIQTVDRFPDDTTQDVQRSVRGVYDQVNELMKKLAD
Ga0334931_042189_65_283	3300034377	Sub-Biocrust Soil	MAATEIDAMTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDRTAVVVQDSVKRVYDQVNELMKKLAD
Ga0334948_001252_4707_4934	3300034760	Sub-Biocrust Soil	VKEQIPFEIDATTAIHLPMSERVLDKLADILFATDEILGMLRVPERLPDATSVTIEMSVQSVYNEVNELMKKLSD
Ga0334948_002269_1101_1295	3300034760	Sub-Biocrust Soil	MTAVHLPMSERVLDKLADILFATDEILDMIRVEDRLPDATAVVVGDSVQRVYDQINELMKKLAD
Ga0334945_024792_293_511	3300034779	Sub-Biocrust Soil	MAATEIDAMTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDRTAVVVHDSVKRVYDQVNELMKKLAD
Ga0334935_000797_2560_2784	3300034781	Biocrust	VNYKSLETDVMTAVHLPMSERVLDKLADILFATDEILDMIKVEDRLPDPTAVVVGDSVRHVYEQINELMKKLAD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084700

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences