Metagenome / Metatranscriptome Family F084617

Basic Information
Family ID	F084617
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	49 residues
Representative Sequence	EKDINTRRNTIKHPILAGDLDPDSPRRVPTNVIIGAIAVIVVILYLLGR
Number of Associated Samples	103
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	90.18 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (98.214 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.750 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.321 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.69% β-sheet: 0.00% Coil/Unstructured: 65.31%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01458	SUFBD	62.50
PF05635	23S_rRNA_IVP	19.64
PF00266	Aminotran_5	1.79
PF08327	AHSA1	1.79
PF00005	ABC_tran	1.79
PF02541	Ppx-GppA	0.89
PF00903	Glyoxalase	0.89
PF11954	DUF3471	0.89
PF12840	HTH_20	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	62.50
COG0248	Exopolyphosphatase/pppGpp-phosphohydrolase	Signal transduction mechanisms [T]	1.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	41.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
Unclassified	root	N/A	1.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	40.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
Unclassified	root	N/A	1.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	8.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
Unclassified	root	N/A	1.79 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	8.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
Unclassified	root	N/A	1.79 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	8.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
Unclassified	root	N/A	1.79 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	2.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
Unclassified	root	N/A	1.79 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.89 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
Unclassified	root	N/A	1.79 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.89 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000878\|AL9A1W_1234907	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	514	Open in IMG/M
3300000887\|AL16A1W_10099423	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	2720	Open in IMG/M
3300001329\|A285W6_1040800	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300001536\|A1565W1_10479583	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300001538\|A10PFW1_12339196	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300001664\|P5cmW16_1052070	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300001686\|C688J18823_10976781	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	537	Open in IMG/M
3300004114\|Ga0062593_102031903	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300004153\|Ga0063455_100929798	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300004156\|Ga0062589_101771927	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300004479\|Ga0062595_101999742	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300004480\|Ga0062592_101552062	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	638	Open in IMG/M
3300004480\|Ga0062592_102078105	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	563	Open in IMG/M
3300005093\|Ga0062594_100928506	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	826	Open in IMG/M
3300005181\|Ga0066678_10716066	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	666	Open in IMG/M
3300005328\|Ga0070676_11253531	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	565	Open in IMG/M
3300005328\|Ga0070676_11530517	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005341\|Ga0070691_10818280	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	569	Open in IMG/M
3300005344\|Ga0070661_101317282	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300005364\|Ga0070673_100822401	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	859	Open in IMG/M
3300005439\|Ga0070711_101944119	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005444\|Ga0070694_101216767	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	631	Open in IMG/M
3300005454\|Ga0066687_10547314	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	687	Open in IMG/M
3300005455\|Ga0070663_101025394	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	718	Open in IMG/M
3300005457\|Ga0070662_101386406	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	605	Open in IMG/M
3300005459\|Ga0068867_100079087	All Organisms → cellular organisms → Bacteria	2474	Open in IMG/M
3300005518\|Ga0070699_100037937	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4171	Open in IMG/M
3300005536\|Ga0070697_100166111	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1866	Open in IMG/M
3300005545\|Ga0070695_100753249	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	777	Open in IMG/M
3300005546\|Ga0070696_100713338	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	819	Open in IMG/M
3300006031\|Ga0066651_10511376	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300006046\|Ga0066652_101677978	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	580	Open in IMG/M
3300006173\|Ga0070716_100840848	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	714	Open in IMG/M
3300006173\|Ga0070716_101657517	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	527	Open in IMG/M
3300006794\|Ga0066658_10230637	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300006800\|Ga0066660_11698061	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	503	Open in IMG/M
3300006845\|Ga0075421_102302132	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300006876\|Ga0079217_10392685	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300006881\|Ga0068865_101278736	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	652	Open in IMG/M
3300006914\|Ga0075436_101233294	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	565	Open in IMG/M
3300006950\|Ga0075524_10106275	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300009098\|Ga0105245_11114284	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	836	Open in IMG/M
3300009137\|Ga0066709_102777487	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300009143\|Ga0099792_10532910	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300010039\|Ga0126309_10040289	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2184	Open in IMG/M
3300010039\|Ga0126309_10951861	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300010397\|Ga0134124_10837072	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300011444\|Ga0137463_1310883	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300012003\|Ga0120163_1103172	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300012004\|Ga0120134_1040019	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300012019\|Ga0120139_1145177	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	616	Open in IMG/M
3300012091\|Ga0136625_1019632	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2507	Open in IMG/M
3300012356\|Ga0137371_10565320	All Organisms → cellular organisms → Bacteria → Proteobacteria	875	Open in IMG/M
3300012668\|Ga0157216_10390607	Not Available	618	Open in IMG/M
3300012681\|Ga0136613_10193662	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1149	Open in IMG/M
3300012927\|Ga0137416_11654887	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300012944\|Ga0137410_10199642	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1548	Open in IMG/M
3300012957\|Ga0164303_11010674	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300012987\|Ga0164307_11623091	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300012989\|Ga0164305_11120773	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300013764\|Ga0120111_1010103	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2937	Open in IMG/M
3300013772\|Ga0120158_10523152	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	516	Open in IMG/M
3300014166\|Ga0134079_10696906	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	517	Open in IMG/M
3300015079\|Ga0167657_1032302	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300015199\|Ga0167647_1114042	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300015264\|Ga0137403_11191027	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	608	Open in IMG/M
3300015356\|Ga0134073_10218696	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300015371\|Ga0132258_10304470	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3921	Open in IMG/M
3300017997\|Ga0184610_1223966	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300018027\|Ga0184605_10331591	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300018061\|Ga0184619_10432573	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300018076\|Ga0184609_10037213	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300018482\|Ga0066669_10665601	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300019865\|Ga0193748_1020000	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300019887\|Ga0193729_1163658	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300020022\|Ga0193733_1075347	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300020060\|Ga0193717_1193843	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300021344\|Ga0193719_10103208	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300021411\|Ga0193709_1050135	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300021412\|Ga0193736_1000284	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6166	Open in IMG/M
3300021976\|Ga0193742_1196333	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300022694\|Ga0222623_10226263	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300022756\|Ga0222622_10134176	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1575	Open in IMG/M
3300022756\|Ga0222622_10292244	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300024245\|Ga0247677_1055717	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300025481\|Ga0208079_1018231	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2186	Open in IMG/M
3300025906\|Ga0207699_10706313	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300025907\|Ga0207645_10943240	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	586	Open in IMG/M
3300025910\|Ga0207684_10619753	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	923	Open in IMG/M
3300025929\|Ga0207664_11157571	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300025939\|Ga0207665_11225757	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	599	Open in IMG/M
3300025972\|Ga0207668_10791121	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	839	Open in IMG/M
3300025981\|Ga0207640_10621037	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300025981\|Ga0207640_11454574	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	615	Open in IMG/M
3300026067\|Ga0207678_11251658	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300026142\|Ga0207698_12560712	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300026313\|Ga0209761_1149366	All Organisms → cellular organisms → Bacteria → Proteobacteria	1103	Open in IMG/M
3300027645\|Ga0209117_1092840	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300027674\|Ga0209118_1003063	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6902	Open in IMG/M
3300027678\|Ga0209011_1097040	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300027876\|Ga0209974_10047999	Not Available	1431	Open in IMG/M
3300028715\|Ga0307313_10265143	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300028719\|Ga0307301_10299359	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300028784\|Ga0307282_10183028	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	999	Open in IMG/M
3300028784\|Ga0307282_10214375	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300028784\|Ga0307282_10281460	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300028784\|Ga0307282_10509329	All Organisms → cellular organisms → Bacteria → FCB group	584	Open in IMG/M
3300028884\|Ga0307308_10522924	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300028885\|Ga0307304_10347443	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300031058\|Ga0308189_10370118	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300033412\|Ga0310810_11217757	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300034125\|Ga0370484_0113543	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.04%
Host-Associated	Host-Associated	16.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.11%
Plants	Host-Associated → Plants	16.96%
Aquatic	Environmental → Aquatic	8.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.71%
Sediment	Environmental → Aquatic → Sediment	7.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.25%
Freshwater	Environmental → Aquatic → Freshwater	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.14%
Loam	Environmental → Terrestrial → Soil → Loam	16.07%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.68%
Ice	Environmental → Aquatic → Freshwater → Ice	1.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.36%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	11.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.71%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	9.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.46%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.68%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.68%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.79%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.79%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.79%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000878	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-5 cm-9A)- 1 week illumina	Environmental	Open in IMG/M
3300000887	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illumina	Environmental	Open in IMG/M
3300001329	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A28-5cm)- 6 month illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012091	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015079	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6b, vegetation/snow interface)	Environmental	Open in IMG/M
3300015199	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019865	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021412	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m1	Environmental	Open in IMG/M
3300021976	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AL9A1W_12349072	3300000878	Permafrost	AGASKREKDINTRRNTIKHPILAGDLDPDSPRRVPTNVIIMAVAVIVVILYLLGR*
AL16A1W_100994233	3300000887	Permafrost	VIEPAGASKREKDISTRRNTIKHPILAGDLDPDSPRRVPTNVIVMAVLVIVIILYLLGR*
A285W6_10408002	3300001329	Permafrost	VAVIEPGDASKREKDINTRRNTIKHPILAGDLDPDSPRRVPTNVIIMAVAVIVVILYLLGR*
A1565W1_104795831	3300001536	Permafrost	RRNTIKHPILAGDLDPDSPRRVPTNVIVMAVLVIVIILYLLGR*
A10PFW1_123391961	3300001538	Permafrost	IEPAGASKREKDISTRRNTIKHPILAGDLDPDSPRKIPTNVILMAVMVIVVILYLLGR*
P5cmW16_10520701	3300001664	Permafrost	ILAGDLDPDSPRRVPTNVIIMAVAVIVVILYLLGR*
C688J18823_109767812	3300001686	Soil	ILAGDLDPDSPRSVPTNVIIGAIAVIIVILYLLGR*
Ga0062593_1020319031	3300004114	Soil	PLGVAVIEPVGASKREKDINTRRNTIKHPILAGDLDPDQPRKVPTNVIVMAVMVIVVILYLLGR*
Ga0063455_1009297981	3300004153	Soil	PASATKREKDISTRRNTIKHPILAGDLDPDSPNKVPTNIIVGAIAVIVVILYLLGR*
Ga0062589_1017719272	3300004156	Soil	RRNTIKHPILAGDLDPDQPRKVPTNVIVMAVMVIVVILYLLGR*
Ga0062595_1019997421	3300004479	Soil	KREKDINTRRNTIKHPILAGDLDPDSPRSVPTNVIIGAIAVIVVILYLLGR*
Ga0062592_1015520622	3300004480	Soil	ATKREKDISTRRNTIKHPILAGDLDPDSPRRVPTNAIIGAITVIVVILYLLGR*
Ga0062592_1020781051	3300004480	Soil	GVAVIEPAAATKREKDISTRRNTIKHPILAGDLDPDSPNKVPTNVIVGAIAVIVVILYLLGR*
Ga0062594_1009285061	3300005093	Soil	GVAVIEPASATKREKDISTRRNTIKHPILASDLDPDSPRKVPTNVIIGAIAVIVVILYLLGR*
Ga0066678_107160662	3300005181	Soil	EPATASKREKDIGTRRNTIKHPILAGDLDPDSPRKVPTNIIIGAITVIVVILYLLGR*
Ga0070676_112535312	3300005328	Miscanthus Rhizosphere	EPAAATKREKDISTRRNTIKHPILAGDLDPDSPNKVPTNVIVGAIAVIVVILYLLGR*
Ga0070676_115305171	3300005328	Miscanthus Rhizosphere	DISTRRNTIKHPILASDLDPDSPRSVPTNVIIGAIAVIVVILYLLGR*
Ga0070691_108182802	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	GVAVIEPSAATKREKDISTRRNTIKHPILAGDLDPDSPRRVPTNVIIGAITVIVVILYLLGR*
Ga0070661_1013172821	3300005344	Corn Rhizosphere	SASKREKDINTRRNTIKHPILAGDLDPDQPRKVPTNVIVMAVMVIVVILYLLGR*
Ga0070673_1008224012	3300005364	Switchgrass Rhizosphere	RNTIKHPILASDLDPDSPRKVPTNVIIGAIGVIVVILYLLGR*
Ga0070711_1019441192	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	EPAGASKREKDINTRRNTIKHPILAGDLDPDSPRSVPTNVIIGAIAVIIVILYLLGR*
Ga0070694_1012167672	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GVAVIEPAAATKREKDISTRRNTIKHPILAGDLDPDSPRKVPTNVIIGAIAVIIVILYLLGR*
Ga0066687_105473142	3300005454	Soil	VAVIEPAAASKREKDISTRRNTIKHPILAGDLDPDSPRKVPTNVIIGAIAVIIVILYLLGR*
Ga0070663_1010253942	3300005455	Corn Rhizosphere	REKDISTRRNTIKHPILASDLDPDSPRKVPTNVIIGAIAVIVVILYLLGR*
Ga0070662_1013864061	3300005457	Corn Rhizosphere	IKHPILAGDLDPDSPRRVPTNVIIGAITVIVVILYLLGR*
Ga0068867_1000790874	3300005459	Miscanthus Rhizosphere	VAVIEPASATKREKDISTRRNTIKHPILASDLDPDSPRKVPTNVIIGAIAVIVVILYLLGR*
Ga0070699_1000379371	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	TRRNTIKHPILAGDLDPDSPRRVPTNVIIGAIAVIVVILYLLGR*
Ga0070697_1001661111	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	EKDINTRRNTIKHPILAGDLDPDSPRRVPTNVIIGAIAVIVVILYLLGR*
Ga0070695_1007532491	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	NTIKHPILAGDLDPDSPRRVPTNAIIGAITVIVVILYLLGR*
Ga0070696_1007133381	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	DISTRRNTIKHPILASDLDPDSPRKVPTNVIIGAIAVIVVILYLLGR*
Ga0066651_105113762	3300006031	Soil	REKDISTRRNTIKHPILAGDLDPDSPRKVPTNVIIGAIAVIIVILYLLGR*
Ga0066652_1016779782	3300006046	Soil	PLGVAVIEPATASKREKDISTRRNTIKHPILAGDLDPDSPRKVPTNIIIGAIAVIVIILYLLGR*
Ga0070716_1008408482	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PILAGDLDPDSPRKVPTNVIIGAIAVIIVILYLLGR*
Ga0070716_1016575172	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	ASKREKDISTRRNTIKHPILAGDLDPDSPRKVPTNVIIGAIAVIVVILYLLGR*
Ga0066658_102306373	3300006794	Soil	NTIKHPILAGDLDPDSPRKVPTNVIIGAIAVIVVILYLLGR*
Ga0066660_116980612	3300006800	Soil	LAGDLDPDSPRKVPTNVIIGAIAVIIVILYLLGR*
Ga0075421_1023021322	3300006845	Populus Rhizosphere	KREKDISTRRNTIKHPILASDLDPDSPRKVPTNVIIGAIAVIVVILYLLGR*
Ga0079217_103926851	3300006876	Agricultural Soil	RRNTIKHPIMAGTLDPDSPRRVPKNVIVMAVMVIVVILYLLGR*
Ga0068865_1012787362	3300006881	Miscanthus Rhizosphere	RRNTIKHPILASDLDPDSPRKVPTNVIIGAIAVIVVILYLLGR*
Ga0075436_1012332941	3300006914	Populus Rhizosphere	TATKREKDISTRRNTIKHPILASDLDPDSPRRVPTNVIIGAIAVIVVILYLLGR*
Ga0075524_101062752	3300006950	Arctic Peat Soil	AGASKREKDINTRRNTIKHPILAGDLDPDSPRRVPTNVIIGAIAVIVVILYLLGR*
Ga0105245_111142841	3300009098	Miscanthus Rhizosphere	KHPILAGDLDPDSPRRVPTNAIIGAITVIVVILYLLGR*
Ga0066709_1027774872	3300009137	Grasslands Soil	RLPRRVAVIEPAAASKPEKDLSTRRNTIKHPIMAGDLDPDSPNKVPTNVIVGAIAVIVVILYLLGK*
Ga0099792_105329101	3300009143	Vadose Zone Soil	NTRRNTIKHPILAGDLDPDSPRKIPTNVIVMAVMVIVVILYLLGR*
Ga0126309_100402891	3300010039	Serpentine Soil	PILAGDLDPDSPRKVPTNVIIMAVMVIVVILYLLGR*
Ga0126309_109518611	3300010039	Serpentine Soil	RNTIKHPILAGDLDPDSPRKVPTNVIILSVMVIVVILYLLGR*
Ga0134124_108370721	3300010397	Terrestrial Soil	PAGASKREKDISTRRNTIKHPILASDLDPDSPRSVPTNVIIGAIAVIVVILYLLGR*
Ga0137463_13108831	3300011444	Soil	INTRRNTIKHPILAGDLDPDSPRRVPTNIIIGAIAVIVVILYLLGR*
Ga0120163_11031722	3300012003	Permafrost	NTIKHPILAGDLDPDSPRRVPTNVIIGAIAVIIVILYLLGR*
Ga0120134_10400191	3300012004	Permafrost	KREKDINTRRNTIKHPILAGDLDPDSPRRVPTNVIIMAVAVIVVILYLLGR*
Ga0120139_11451771	3300012019	Permafrost	VIEPAGASKREKDINTRRNTIKHPILAGDLDPDSPRRVPTNVIIISVMVIVVVLYLLGR*
Ga0136625_10196321	3300012091	Polar Desert Sand	AAKREKDIGTRRNTIKHPIMAGTLDPDAPQKIPTNVIVMAVMVIVVILYLLGR*
Ga0137371_105653201	3300012356	Vadose Zone Soil	STRRNTIKHPIMAGDLDPDSPNKVPTNIIVGAIAVIVVILYLLGR*
Ga0157216_103906071	3300012668	Glacier Forefield Soil	MAGNLVPDAPRKVPKNVIIMAIMVIVVILYLLGR*
Ga0136613_101936621	3300012681	Polar Desert Sand	TIKHPIMAGTLDPDAPQKIPTNVIVMAVMVIVVILYLLGR*
Ga0137416_116548871	3300012927	Vadose Zone Soil	LGVAVIEPAGASKREKDINSRRNTIKHPILAGDLDPDSPRRVPTNVIIGAVMVIILILYLLGR*
Ga0137410_101996421	3300012944	Vadose Zone Soil	NTRRNTIKHPILAGDLDPDSPRRVPTNVIIGAIAVIVVILYLLGR*
Ga0164303_110106741	3300012957	Soil	TIKHPILASDLDPDSPRRVPTNIIIGAIAVIVVILYLLGR*
Ga0164307_116230911	3300012987	Soil	RRNTIKHPILASDLDPDSPRRVPTNVIVGAIMVIVTILSLLGR*
Ga0164305_111207731	3300012989	Soil	PTSATKREKDISTRRNTIKHPILASDLDPDSPRRVPTNIIIGAIAVIVVILYLLGR*
Ga0120111_10101031	3300013764	Permafrost	DINTRRNTIKHPILAGDLDPDSPRRVPTNVIVMAVMVIVVILYLLGR*
Ga0120158_105231522	3300013772	Permafrost	FGVAVTEPAGASKREKDISPRRNTIKHPILAGDLDPDSPRRVPTNVIVMAVLVIVIILYLLGR*
Ga0134079_106969061	3300014166	Grasslands Soil	KREKDISTRRNTIKHPILAGDLDPDSPRKVPTNIIIGAIAVIVIILYLLGR*
Ga0167657_10323022	3300015079	Glacier Forefield Soil	PAGASKREKDISTRRNTIKHPILAGDLDPDSPRKIPTNVILMAVMVIVVILYLLGR*
Ga0167647_11140422	3300015199	Glacier Forefield Soil	RRNTIKHPILAGDLDPDSPRKIPTNVIVMAVMVIVVILYLLGR*
Ga0137403_111910272	3300015264	Vadose Zone Soil	ISTRRNTIKHPILAGDLDPDSPNRVPTNVIIGAIAVIVIILYLLGR*
Ga0134073_102186961	3300015356	Grasslands Soil	NTIKHPILASDLDPDSPRTVPTNVIIGAIAVIVVILYLLGR*
Ga0132258_103044701	3300015371	Arabidopsis Rhizosphere	STRRNTIKHPILASDLDPDSPRKVPTNVIIGAIAVIVVILYLLGR*
Ga0184610_12239662	3300017997	Groundwater Sediment	KHPILAGDLDPDSPRRVPTKVIIMAVMVIVVILYLLGR
Ga0184605_103315911	3300018027	Groundwater Sediment	ILAGDLDPDSPRRVPTNVIIGSVLVIILILYLLGR
Ga0184619_104325731	3300018061	Groundwater Sediment	KREKDINTRRNTIKHPILAGDLDPDSPRRVPTNVIVMAVLVIVVILYLLGR
Ga0184609_100372133	3300018076	Groundwater Sediment	EKDINTRRNTIKHPILAGDLDPDSPRRVPTNVIIVSVLVIVVILYLLGR
Ga0066669_106656011	3300018482	Grasslands Soil	TRRNTIKHPILAGDLDPDSPRKVPTNIIIGAIAVIVIILYLLGR
Ga0193748_10200001	3300019865	Soil	PAGASKREKDINSRRNTIKHPILAGDLDPDSPRRVPTNVIIGAVMVIILILYLLGR
Ga0193729_11636582	3300019887	Soil	PAGASKREKDINTRRNTIKHPILAGDLDPDSPRRVPTNIIIGAIAVIVVILYLLGR
Ga0193733_10753472	3300020022	Soil	RNTIKHPILAGDLDPDSPRRVPTNVIIMAVMVIIVILYLLGR
Ga0193717_11938432	3300020060	Soil	TRRNTIKHPIMAGDLDPDSPRSVPTNVIIGAIAVIVVILYLLGR
Ga0193719_101032081	3300021344	Soil	GASKREKDINTRRNTIKHPILAGDLDPDSPRSVPTNVIIGAIAVIVVILYLLGR
Ga0193709_10501352	3300021411	Soil	RRNTIKHPILAGDLDPDSPRSVPTNVIIGAIAVIVVILYLLGR
Ga0193736_10002841	3300021412	Soil	TRRNTIKHPILAGDLDPDSPRKVPTNVIIMSVMVIVVILYLLGR
Ga0193742_11963332	3300021976	Soil	NTRRNTIKHPILAGDLDPDSPRRVPTNVIIGAIAVIIVILYLLGR
Ga0222623_102262631	3300022694	Groundwater Sediment	DINTRRNTIKHPILAGDLDPDSPRRVPTNVIIMAVMVIIVILYLLGR
Ga0222622_101341762	3300022756	Groundwater Sediment	TIKHPILAGDLDPDSPRRVPTNVIIMAVMVIVVILYLLGR
Ga0222622_102922442	3300022756	Groundwater Sediment	SKREKDINTRRNTIKHPILAGDLDPDSPRRVPTNVIIMAVMVIVVILYLLGR
Ga0247677_10557171	3300024245	Soil	PAGASKREKDINTRRNTIKHPILAGDLDPDSPRSVPTNVIIGAIAVIVVILYLLGR
Ga0208079_10182313	3300025481	Arctic Peat Soil	AGASKREKDINTRRNTIKHPILAGDLDPDSPRRVPTNVIIGAIAVIVVILYLLGR
Ga0207699_107063131	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	RRNTIKHPILASDLDPDSPRRVPTNIIIGAIAVIVVILYLLGR
Ga0207645_109432402	3300025907	Miscanthus Rhizosphere	VIEPAAATKREKDISTRRNTIKHPILAGDLDPDSPNKVPTNVIVGAIAVIVVILYLLGR
Ga0207684_106197532	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LGVAVIEPAGASKREKDINTRRNTIKHPILAGDLDPDSPRRVPTNVIIGAIAVIVVILYLLGR
Ga0207664_111575711	3300025929	Agricultural Soil	TRRNTIKHPILAGDLDPDSPRSVPTNVIIGAIAVIVVILYLLGR
Ga0207665_112257572	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	PILAGDLDPDSPRKVPTNVIIGAIAVIIVILYLLGR
Ga0207668_107911211	3300025972	Switchgrass Rhizosphere	ISTRRNTIKHPILAGDLDPDSPRRVPTNAIIGAITVIVVILYLLGR
Ga0207640_106210371	3300025981	Corn Rhizosphere	EPATATKREKDISTRRNTIKHPILASDLDPDSPRRVPTNVIIGAIAVIVVILYLLGR
Ga0207640_114545742	3300025981	Corn Rhizosphere	EKDINTRRNTIKHPILAGDLDPDSPRKVPTNVIIGAIAVIIVILYLLGR
Ga0207678_112516581	3300026067	Corn Rhizosphere	PILAGDLDPDQPRKVPTNVIIMAVMVIVVILYLLGR
Ga0207698_125607122	3300026142	Corn Rhizosphere	KREKDINTRRNTIKHPILAGDLDPDSPRSVPTNVIIGAIAVIVVILYLLGR
Ga0209761_11493661	3300026313	Grasslands Soil	LGVAVIEPATASKREKDIGTRRNTIKHPIMAGDLDPDSPNKVPTNIIVGAIAVIVVILYLLGR
Ga0209117_10928401	3300027645	Forest Soil	RRNTIKHPILAGDLDPDSPRKVPTNVIIMAVMVIVVILYLLGR
Ga0209118_10030631	3300027674	Forest Soil	ASKREKDINTRRNTIKHPILAGDLDPDSPRRVPTNVIIMAVLVIVVILYLLGR
Ga0209011_10970401	3300027678	Forest Soil	REKDINTRRNTIKHPILAGDLDPDSPRKVPTNVIIMAVMVIVVILYLLGR
Ga0209974_100479992	3300027876	Arabidopsis Thaliana Rhizosphere	RRNTIKHPILAGDLDPDSPRMVPTNVIIMSVMVIIVILYLLGR
Ga0307313_102651432	3300028715	Soil	ASKREKDINTRRNTIKHPILAGDLDPDSPRRVPTNVIIMAVMVIVVILYLLGR
Ga0307301_102993591	3300028719	Soil	KREKDINTRRNTIKHPILAGDLDPDSPRRVPTNVIIMAVMVIVVILYLLGR
Ga0307282_101830282	3300028784	Soil	RNTIKHPILAGDLDPDSPRRVPTNIIIGAIAVIVVILYLLGR
Ga0307282_102143752	3300028784	Soil	SRRNTIKHPILAGDLDPDSPRRVPTNVIIGAVMVIILILYLLGR
Ga0307282_102814601	3300028784	Soil	IKHPILAGDLDPDSPRSVPTNVIIGAIAVIVVILYLLGR
Ga0307282_105093291	3300028784	Soil	ASRREKDINSRRNTIKHPILASDMDPDSPRKVPTNVIIMAVMVIIVILYLLGR
Ga0307308_105229242	3300028884	Soil	TIKHPILAGDLDPDSPRRVPTKVIIGAVLVIILILYLLGR
Ga0307304_103474432	3300028885	Soil	LGVAVIEPAGASKREKDINTRRNTIKHPILAGDLDPDSPRRVPTNVIIMAVMVIIVILYLLGR
Ga0308189_103701182	3300031058	Soil	PILAGDLDPDSPRRVPTNVIIMAVMVIVVILYLLGR
Ga0310810_112177571	3300033412	Soil	ATKREKDISTRRNTIKHPILASDLDPDSPRRVPTNIIIGAIAVIVVILYLLGR
Ga0370484_0113543_562_711	3300034125	Untreated Peat Soil	EKDINTRRNTIKHPILAGDLDPDSPRRVPTNVIIGAIAVIIVILYLLGR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084617

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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