NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F084388

Metagenome Family F084388

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F084388
Family Type Metagenome
Number of Sequences 112
Average Sequence Length 97 residues
Representative Sequence VRINFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCG
Number of Associated Samples 98
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Archaea
% of genes with valid RBS motifs 18.75 %
% of genes near scaffold ends (potentially truncated) 81.25 %
% of genes from short scaffolds (< 2000 bps) 75.00 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Archaea (100.000 % of family members)
NCBI Taxonomy ID 2157
Taxonomy All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand
(12.500 % of family members)
Environment Ontology (ENVO) Unclassified
(30.357 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 31.52%    Coil/Unstructured: 68.48%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF14947HTH_45 34.82
PF01300Sua5_yciO_yrdC 7.14
PF03481Sua5_C 6.25
PF07732Cu-oxidase_3 4.46
PF13500AAA_26 1.79
PF07992Pyr_redox_2 1.79
PF04055Radical_SAM 0.89
PF06778Chlor_dismutase 0.89
PF00127Copper-bind 0.89
PF01667Ribosomal_S27e 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG2132Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)Cell cycle control, cell division, chromosome partitioning [D] 4.46
COG2051Ribosomal protein S27ETranslation, ribosomal structure and biogenesis [J] 0.89
COG3253Coproheme decarboxylase/chlorite dismutaseCoenzyme transport and metabolism [H] 0.89


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459017|G14TP7Y02JDIWAAll Organisms → cellular organisms → Archaea557Open in IMG/M
3300001977|JGI24746J21847_1005247All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota2025Open in IMG/M
3300002075|JGI24738J21930_10035929All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera1009Open in IMG/M
3300003267|soilL1_10071524All Organisms → cellular organisms → Archaea1334Open in IMG/M
3300003987|Ga0055471_10003035All Organisms → cellular organisms → Archaea2961Open in IMG/M
3300003993|Ga0055468_10021568All Organisms → cellular organisms → Archaea1417Open in IMG/M
3300004114|Ga0062593_100111637All Organisms → cellular organisms → Archaea1963Open in IMG/M
3300004463|Ga0063356_101777084All Organisms → cellular organisms → Archaea925Open in IMG/M
3300004479|Ga0062595_100008981All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota3167Open in IMG/M
3300004480|Ga0062592_102077213All Organisms → cellular organisms → Archaea563Open in IMG/M
3300005339|Ga0070660_101281172All Organisms → cellular organisms → Archaea622Open in IMG/M
3300005341|Ga0070691_10628548All Organisms → cellular organisms → Archaea637Open in IMG/M
3300005364|Ga0070673_100700027All Organisms → cellular organisms → Archaea930Open in IMG/M
3300005438|Ga0070701_10771391All Organisms → cellular organisms → Archaea653Open in IMG/M
3300005457|Ga0070662_100002225All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis11900Open in IMG/M
3300005507|Ga0074259_11351916All Organisms → cellular organisms → Archaea723Open in IMG/M
3300005526|Ga0073909_10000079All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis35407Open in IMG/M
3300005539|Ga0068853_100210254All Organisms → cellular organisms → Archaea1773Open in IMG/M
3300005543|Ga0070672_100143123All Organisms → cellular organisms → Archaea1974Open in IMG/M
3300005578|Ga0068854_101414818All Organisms → cellular organisms → Archaea629Open in IMG/M
3300005615|Ga0070702_100216817All Organisms → cellular organisms → Archaea1277Open in IMG/M
3300005615|Ga0070702_101838734All Organisms → cellular organisms → Archaea507Open in IMG/M
3300005617|Ga0068859_102845862All Organisms → cellular organisms → Archaea531Open in IMG/M
3300005618|Ga0068864_100743599All Organisms → cellular organisms → Archaea961Open in IMG/M
3300005844|Ga0068862_101045357All Organisms → cellular organisms → Archaea809Open in IMG/M
3300005937|Ga0081455_10001363All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis30136Open in IMG/M
3300005937|Ga0081455_10421161All Organisms → cellular organisms → Archaea921Open in IMG/M
3300006034|Ga0066656_10075739All Organisms → cellular organisms → Archaea1999Open in IMG/M
3300006237|Ga0097621_100377746All Organisms → cellular organisms → Archaea1265Open in IMG/M
3300006844|Ga0075428_100547171All Organisms → cellular organisms → Archaea1237Open in IMG/M
3300006852|Ga0075433_10135802All Organisms → cellular organisms → Archaea2186Open in IMG/M
3300006854|Ga0075425_101054727All Organisms → cellular organisms → Archaea926Open in IMG/M
3300006854|Ga0075425_102397043All Organisms → cellular organisms → Archaea585Open in IMG/M
3300006871|Ga0075434_100739926All Organisms → cellular organisms → Archaea1000Open in IMG/M
3300009036|Ga0105244_10276741All Organisms → cellular organisms → Archaea779Open in IMG/M
3300009100|Ga0075418_11271426All Organisms → cellular organisms → Archaea798Open in IMG/M
3300009101|Ga0105247_11789669All Organisms → cellular organisms → Archaea511Open in IMG/M
3300009808|Ga0105071_1000013All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis14674Open in IMG/M
3300009810|Ga0105088_1025542All Organisms → cellular organisms → Archaea938Open in IMG/M
3300009811|Ga0105084_1020650All Organisms → cellular organisms → Archaea1087Open in IMG/M
3300009811|Ga0105084_1091109All Organisms → cellular organisms → Archaea569Open in IMG/M
3300009812|Ga0105067_1000163All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis6104Open in IMG/M
3300009812|Ga0105067_1079544All Organisms → cellular organisms → Archaea566Open in IMG/M
3300009816|Ga0105076_1094244All Organisms → cellular organisms → Archaea576Open in IMG/M
3300009817|Ga0105062_1009542All Organisms → cellular organisms → Archaea1508Open in IMG/M
3300009821|Ga0105064_1005617All Organisms → cellular organisms → Archaea2122Open in IMG/M
3300010323|Ga0134086_10044756All Organisms → cellular organisms → Archaea1489Open in IMG/M
3300010373|Ga0134128_10484113All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota1380Open in IMG/M
3300010373|Ga0134128_11218884All Organisms → cellular organisms → Archaea830Open in IMG/M
3300010375|Ga0105239_12088589All Organisms → cellular organisms → Archaea658Open in IMG/M
3300011119|Ga0105246_10944858All Organisms → cellular organisms → Archaea776Open in IMG/M
3300011119|Ga0105246_11174044All Organisms → cellular organisms → Archaea705Open in IMG/M
3300012356|Ga0137371_10480917All Organisms → cellular organisms → Archaea959Open in IMG/M
3300012478|Ga0157328_1000026All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis4309Open in IMG/M
3300012487|Ga0157321_1000468All Organisms → cellular organisms → Archaea1847Open in IMG/M
3300012488|Ga0157343_1001206All Organisms → cellular organisms → Archaea1220Open in IMG/M
3300012503|Ga0157313_1000787All Organisms → cellular organisms → Archaea1552Open in IMG/M
3300012503|Ga0157313_1065701All Organisms → cellular organisms → Archaea506Open in IMG/M
3300012517|Ga0157354_1006510All Organisms → cellular organisms → Archaea1058Open in IMG/M
3300012951|Ga0164300_10000084All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae12771Open in IMG/M
3300012955|Ga0164298_10046734All Organisms → cellular organisms → Archaea2055Open in IMG/M
3300012957|Ga0164303_10001352All Organisms → cellular organisms → Archaea6660Open in IMG/M
3300012958|Ga0164299_10012856All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota3191Open in IMG/M
3300012961|Ga0164302_10107100All Organisms → cellular organisms → Archaea1559Open in IMG/M
3300014154|Ga0134075_10329276All Organisms → cellular organisms → Archaea667Open in IMG/M
3300015358|Ga0134089_10310136All Organisms → cellular organisms → Archaea657Open in IMG/M
3300015374|Ga0132255_103943574All Organisms → cellular organisms → Archaea630Open in IMG/M
3300018075|Ga0184632_10339574All Organisms → cellular organisms → Archaea645Open in IMG/M
3300018078|Ga0184612_10052319All Organisms → cellular organisms → Archaea2128Open in IMG/M
3300018078|Ga0184612_10195479All Organisms → cellular organisms → Archaea1052Open in IMG/M
3300018078|Ga0184612_10546719All Organisms → cellular organisms → Archaea557Open in IMG/M
3300018469|Ga0190270_10674184All Organisms → cellular organisms → Archaea1021Open in IMG/M
3300019869|Ga0193705_1003505All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae3445Open in IMG/M
3300020006|Ga0193735_1049024All Organisms → cellular organisms → Archaea1258Open in IMG/M
3300021081|Ga0210379_10220967All Organisms → cellular organisms → Archaea819Open in IMG/M
3300022893|Ga0247787_1014300All Organisms → cellular organisms → Archaea1017Open in IMG/M
3300023263|Ga0247800_1083522All Organisms → cellular organisms → Archaea627Open in IMG/M
3300025290|Ga0207673_1045870All Organisms → cellular organisms → Archaea616Open in IMG/M
3300025791|Ga0210115_1029953All Organisms → cellular organisms → Archaea1205Open in IMG/M
3300025907|Ga0207645_10159755All Organisms → cellular organisms → Archaea1474Open in IMG/M
3300025914|Ga0207671_10223292All Organisms → cellular organisms → Archaea1476Open in IMG/M
3300025918|Ga0207662_10000138All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis35094Open in IMG/M
3300025925|Ga0207650_10122358All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota2027Open in IMG/M
3300025926|Ga0207659_10077179All Organisms → cellular organisms → Archaea2451Open in IMG/M
3300026041|Ga0207639_11536034All Organisms → cellular organisms → Archaea625Open in IMG/M
3300026078|Ga0207702_12267780All Organisms → cellular organisms → Archaea531Open in IMG/M
3300026116|Ga0207674_10551933All Organisms → cellular organisms → Archaea1113Open in IMG/M
3300026116|Ga0207674_11765310All Organisms → cellular organisms → Archaea586Open in IMG/M
3300026118|Ga0207675_100056422All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota3663Open in IMG/M
3300026142|Ga0207698_10428878All Organisms → cellular organisms → Archaea1271Open in IMG/M
3300026732|Ga0207588_102526All Organisms → cellular organisms → Archaea539Open in IMG/M
3300026936|Ga0207585_100212All Organisms → cellular organisms → Archaea1028Open in IMG/M
3300027324|Ga0209845_1015760All Organisms → cellular organisms → Archaea1253Open in IMG/M
3300027364|Ga0209967_1002449All Organisms → cellular organisms → Archaea2404Open in IMG/M
3300027379|Ga0209842_1073476All Organisms → cellular organisms → Archaea599Open in IMG/M
3300027379|Ga0209842_1074105All Organisms → cellular organisms → Archaea596Open in IMG/M
3300027490|Ga0209899_1080654All Organisms → cellular organisms → Archaea640Open in IMG/M
3300027490|Ga0209899_1081382All Organisms → cellular organisms → Archaea637Open in IMG/M
3300027552|Ga0209982_1001104All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae3610Open in IMG/M
3300027721|Ga0209492_1268233All Organisms → cellular organisms → Archaea574Open in IMG/M
3300027873|Ga0209814_10005139All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota4969Open in IMG/M
3300027886|Ga0209486_10031301All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota2565Open in IMG/M
3300027907|Ga0207428_10909376All Organisms → cellular organisms → Archaea621Open in IMG/M
(restricted) 3300031197|Ga0255310_10176305All Organisms → cellular organisms → Archaea593Open in IMG/M
3300031538|Ga0310888_10092876All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota1518Open in IMG/M
3300031892|Ga0310893_10011133All Organisms → cellular organisms → Archaea2454Open in IMG/M
3300032003|Ga0310897_10014482All Organisms → cellular organisms → Archaea2414Open in IMG/M
3300032174|Ga0307470_10962465All Organisms → cellular organisms → Archaea676Open in IMG/M
3300033412|Ga0310810_10060688All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis4587Open in IMG/M
3300033412|Ga0310810_10489924All Organisms → cellular organisms → Archaea1227Open in IMG/M
3300034819|Ga0373958_0025697All Organisms → cellular organisms → Archaea1123Open in IMG/M
3300034820|Ga0373959_0009868All Organisms → cellular organisms → Archaea1657Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand12.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.93%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere7.14%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.46%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere4.46%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.57%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.57%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.57%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.68%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.68%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.68%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.79%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.79%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.79%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.79%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil1.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.79%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.89%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.89%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.89%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.89%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.89%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.89%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.89%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.89%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.89%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.89%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.89%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459017Litter degradation ZMR4EngineeredOpen in IMG/M
3300001977Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5Host-AssociatedOpen in IMG/M
3300002075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4Host-AssociatedOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300003987Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2EnvironmentalOpen in IMG/M
3300003993Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005507Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5Host-AssociatedOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300009036Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009808Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50EnvironmentalOpen in IMG/M
3300009810Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30EnvironmentalOpen in IMG/M
3300009811Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30EnvironmentalOpen in IMG/M
3300009812Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60EnvironmentalOpen in IMG/M
3300009816Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10EnvironmentalOpen in IMG/M
3300009817Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20EnvironmentalOpen in IMG/M
3300009821Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012478Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.9.old.080610Host-AssociatedOpen in IMG/M
3300012487Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510Host-AssociatedOpen in IMG/M
3300012488Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610Host-AssociatedOpen in IMG/M
3300012503Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_RHost-AssociatedOpen in IMG/M
3300012517Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019869Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300022893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4EnvironmentalOpen in IMG/M
3300023263Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6EnvironmentalOpen in IMG/M
3300025290Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5Host-AssociatedOpen in IMG/M
3300025791Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026732Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A4-10 (SPAdes)EnvironmentalOpen in IMG/M
3300026936Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A2-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027324Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)EnvironmentalOpen in IMG/M
3300027364Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027379Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300027490Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027552Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027721Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300034819Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1Host-AssociatedOpen in IMG/M
3300034820Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
4ZMR_003683902170459017Switchgrass, Maize And Mischanthus LitterKGVRINFFVSYDGGTPFAEWNLDHKEMGSAGGMITSVKTSSNGFVLKGFEAFDNICNVETPSDVKLSGNCGEGTVRLVSDNGNKGTFTSNVKCG
JGI24746J21847_100524743300001977Corn, Switchgrass And Miscanthus RhizosphereKEIKDVRINFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIMTSSDNFVLKGVEAFDNICKNETPSDISLSGSCGAGIVKLVSDNGNKGSFSSDVKCG*
JGI24738J21930_1003592913300002075Corn RhizosphereQELKSVGKGTIFCDGEKEIKDVRINFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS*
soilL1_1007152413300003267Sugarcane Root And Bulk SoilRGDVSCQGGEEIKNVRINFFVSSDKGTSFAEWNIDHEKFGSAGGIITRIQASSESFSLKGFEAFDSICDNETPSDIKLSGHCGQGTVKLISDSGNKGTFSSNVKCG*
Ga0055471_1000303553300003987Natural And Restored WetlandsGEEIKGVRINFFVSYDKGTSFAEWNIDHEKFGSSGGIITNIQASSNSFVLKGVEAFDNICDNETPADINLSGHCGSGTVRLLSDNGNKGTFTSNVKCS*
Ga0055468_1002156833300003993Natural And Restored WetlandsIELKSVGKGDISCQDGEEIKGVRINFFVSYDKGTFFAEWNIDHEKFGSSGGIITNIQASSNSFVLKGVEAFDNICDNETPADINLSGHCGSGTVRLLSDNGNKGTFTSNVKCS*
Ga0062593_10011163713300004114SoilGVRINFFVSYDGGTPFAEWNLDHKEMGSAGGMITSVKTSSNGFVLKGFEAFDNICNVETPSDVKLSGNCGEGTVRLVSDNGNKGTFTSNVKCG*
Ga0063356_10177708433300004463Arabidopsis Thaliana RhizosphereHDKGTSFAEWNIDHEKFGSAGGIITGIQASSESFSLKGFEAFDRICDNETPSDIKLSGHCGEGTVKLISDSGNKGTFSSNVKCG*
Ga0062595_10000898123300004479SoilVRINFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS*
Ga0062592_10207721313300004480SoilEEIKNVRIHFFVSHDKGTSFAEWNIDHEKFGSAGGIITGIQASSESFSLKGFEAFDSICDNETPSDIKLSGHCGEGTVKLISDSGNKGTFNSNVKCG*
Ga0070660_10128117213300005339Corn RhizosphereVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDISLSDSCGAGIVKPVSDNGNKGSFSSDVKCG*
Ga0070691_1062854813300005341Corn, Switchgrass And Miscanthus RhizosphereVTINFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS*
Ga0070673_10070002733300005364Switchgrass RhizosphereELKSVGKGKIFCDGEKEIKDVTINFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS*
Ga0070701_1077139113300005438Corn, Switchgrass And Miscanthus RhizosphereVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS*
Ga0070662_100002225183300005457Corn RhizosphereINFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS*
Ga0074259_1135191633300005507Arabidopsis RhizosphereIDHPKLGSAGGIITNIVTSSDNFVLKGVEAFDNICKNETPSDISLSGSCGAGIVKLVSDNGNKGSFSSDVKCG*
Ga0073909_10000079313300005526Surface SoilVRINFFVSNDKGTSFAEWNIDHPKLGSACGIISNNMTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS*
Ga0068853_10021025423300005539Corn RhizosphereVRINFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCG*
Ga0070672_10014312313300005543Miscanthus RhizosphereEWNIDHPKLGSAGGIVSSIRTSSDSFVLKGVEAFDNICNNETPSDISLSGSCGAGTVKLVFYNGNKGTFSSDVKCG*
Ga0068854_10141481823300005578Corn RhizosphereKGVRINFFVSYDEETHFAEWNMDHKELGSAGGMITNVKTSSDSFVLKGFEAFDSICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG*
Ga0070702_10021681743300005615Corn, Switchgrass And Miscanthus RhizosphereFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS*
Ga0070702_10183873413300005615Corn, Switchgrass And Miscanthus RhizosphereKGVRINFFVSYDEETPFAEWNMDHKELGSAGGMITNVKTSSDSFVLKGFEAFDSICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG*
Ga0068859_10284586213300005617Switchgrass RhizosphereEIKDVTINFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIMTSSDNFVLKGVEAFDNICKNETPSDISLSGSCGAGIVKLVSDNGNKGSFSSDVKCG*
Ga0068864_10074359933300005618Switchgrass RhizosphereSQELKSVGKGTIFCDGEKEIKDVRINFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS*
Ga0068862_10104535723300005844Switchgrass RhizosphereVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS*FSWILDEIIKSNQYDLDYGR*
Ga0081455_10001363203300005937Tabebuia Heterophylla RhizosphereVRINFFVSHDKGTSFAEWNIDHQKLGSAGGIIIKIKTSSDSFVLKGVEAFDNICNNETPSDINLSGNCGAGTVRLVSDNGNKGTFTPNVKGG*
Ga0081455_1042116133300005937Tabebuia Heterophylla RhizosphereTCDGGEEVKGVSINFFVSHDKGTSFAEWNIDHQKLGSAGGIITKIKTSSDSFVLKGVEGFDNICNNETSSDINLSGNCGAGTVRLVSDNGNKGTFTSNVKCG*
Ga0066656_1007573943300006034SoilKGVRINFFVSYDKGTSFAEWNIDHQKLGSAGGIITKVKTSSDSFDLKGVEAFDNICNNETPSDINLSGNCGAGTVRLVSDNGNKGTFTSNVKCG*
Ga0097621_10037774643300006237Miscanthus RhizosphereEWNIDHPKLGSAGGIVSSIRTSSDSFVLKGVEAFDNICNNETPSDISLSGSCGAGIVKLVSDNGNKGSFSSDVKCG*
Ga0075428_10054717113300006844Populus RhizosphereIELKSVGKGDISCQGGEEIKGVRINFFVSYDKGTSFAEWNIDHEKFGSSGGIITNIQASSNSFVLKGVEAFDNICDNETPADINLSGHCGSGTVRLVSDNGNKGSFTSNVKCS*
Ga0075433_1013580243300006852Populus RhizosphereINFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIMTSSDNFVLKGVEAFDNICKNETPSDISLSGSCGAGIVKLVSNNGNKGSFSSDVKCG*
Ga0075425_10105472713300006854Populus RhizosphereVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS*FSWILDEIIKSNQYDLD
Ga0075425_10239704323300006854Populus RhizosphereFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIMTSSDNFVLKGVEAFDNICKNETPSDISLSGSCGAGIVKLVSNNGNKGSFSSDVKCG*FSWILDEIIKSNQYDLDNGR*
Ga0075434_10073992633300006871Populus RhizosphereFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIMTSSDNFVLKGVEAFDNICKNETPSDISLSGSCGAGIVKLVSNNGNKGSFSSDVKCG*
Ga0105244_1027674113300009036Miscanthus RhizosphereVSNDKGTSFAEWNIDHPKLGSAGGIISNIMTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS*
Ga0075418_1127142623300009100Populus RhizosphereISCQGGEEIKDVRINFFVSYDEGTTFAEWNIDHEKFGSSGGIITNIDASSSSFALKGVEAFDNICDNETPADINLSGHCGSGTVRLVSDNGNKGTFMSNVKCS*
Ga0105247_1178966913300009101Switchgrass RhizosphereELKSVGKGTIFCDGEKEIKDVRINFFVSNDKGTSFAEWNIDHPKLGSAGGIVSSIRTSSDSFVLKGVEAFDNICNNETPSDISLSGSCGAGIVKLVSDNGNKGSFSSDVKCDLVGS*
Ga0105071_1000013213300009808Groundwater SandGESVEGVRINFFVSYDKGTSFAEWNIDHEKLGSAGGIITKVETSSSGFVLKGFEAFDNICDNQTPSDIDLSGHCGTGTVRLVSDNGNKGTFTSNVKCG*
Ga0105088_102554213300009810Groundwater SandKGAISCDGGESVEGVRINFFVSYDKGTSFAEWNIDHEKLGSAGGIITKVETSSSGFVLKGFEAFDNICDNQTPSDIDLSGHCGTGTVRLVSDNGNKGTFTSNVKCG*
Ga0105084_102065033300009811Groundwater SandSVEGVRINFFVSYDKGTSFAEWNIDHEELGSAGGIITKVKTSSSGFVLKGFEAFDNICDNQTPSDIDLSGHCGTGTVRLVSDNGNKGTFTSNVKCS*
Ga0105084_109110913300009811Groundwater SandSVEGVRINFFVSYDKGTSFAEWNIDHEELGSAGGIITKVKTSSSGFVLKGFEAFDNICDNQTPSDIDLSGHCGTGTVRLVSDNGNKGTFTSNVKCG*
Ga0105067_100016313300009812Groundwater SandKSVGKGAISCDGGESVEGVRINFFVSYDKGTSFAEWNIDHEKLGSAGGIITKVETSSSGFVLKGFEAFDNICDNQTPSDIDLSGHCGTGTVRLVSDNGNKGTFTSNVKCG*
Ga0105067_107954413300009812Groundwater SandKSVGKGAISCDGGESVEGVRINFFVSYDKGTSFAEWNIDHEELGSAGGIITKVKTSSSGFVLKGFEAFDNICDNQTPSDIDLSGHCGTGTVRLVSDNGNKGTFTSNVKCS*
Ga0105076_109424413300009816Groundwater SandFELKSVGKGAISCDGGESVEGIRINFFVSYDKGTSFAEWNIDHEKLGSAGGIITKVKTSSSGFVLKGFEAFDNICDNQTPSDIDLSGHCGTGTVRLVSDNGNKGTFTSNVKCS*
Ga0105062_100954213300009817Groundwater SandEGVRINFFVSYDKGTSFAEWNIDHEELGSAGGIITKVKTSSSGFVLKGFEAFDNICDNQTPSDIDLSGHCGTGTVRLVSDNGNKGTFTSNVKCG*
Ga0105064_100561723300009821Groundwater SandMTLAKEFELKSVGKGAISCDGGESVEGVRINFFVSYDKGTSFAEWNIDHEKLGSAGGIITKVKTSSSGFVLKGFEAFDNICDNQTPSDIDLSGHCGTGTVRLVSDNGNKG
Ga0134086_1004475613300010323Grasslands SoilVKGVRINFFVTHDKGTSFAEWNIDHEELGSAGGIITKVTTSSNSFVLKGVEAFDNICDNQTPSDIDLSGHCGSGTVKLVSENGNKGTFASNVKCG*
Ga0134128_1048411333300010373Terrestrial SoilAISCGNGEEIKGVRINFFVSYDGGTPFAEWNLDHKEMGSAGGMITNVKTSSNGFVLKGFEAFDNMCNVETPSDVKLSGNCGEGTVRLVSDNGNKGTFTSNVKCG*
Ga0134128_1121888433300010373Terrestrial SoilLAEGQELKSVGKGTFSCDGEKEIKDVRINFFVSYDKGTSFAEWNIDHPKLGSAGGIISNIMTSSDNFVLKGVEAFDNICKNETPSDISLSGSCGAGIVKLVSDNGNKGSFSSDVKCS*
Ga0105239_1208858913300010375Corn RhizosphereGKGAISCGNGEEVKGVRINFFVSYDGGTPFAEWNMDHKELGSAGGMITNVKTSSDSFVLKGFEAFDSICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG*
Ga0105246_1094485823300011119Miscanthus RhizosphereNGEEIKGVRINFFVSYDGGTPFAEWNLDHKEMGSAGGMITSVKTSSNGFVLKGFEAFDNICNVETPSDVKLSGNCGEGTVRLVSDNGNKGTFTSNVKCG*
Ga0105246_1117404413300011119Miscanthus RhizosphereNGEEIKGVRINFFVSYDGGTPFAEWNLDHKEMGSAGGMITNVKTSSNGFVLKGFEAFDNMCNVETPSDVKLSGNCGEGTVRLVSDNGNKGTFTSNVKCG*
Ga0137371_1048091733300012356Vadose Zone SoilDLVKGVRINFFVTHDKGTSFAEWNIDHEELGSAGGIITKVKTSSSSNSFVLKGVEAFDNICDNQTPSDIDLSGHCGSGTVKLVSENGNKGTFASNVKCG*
Ga0157328_100002683300012478Arabidopsis RhizosphereGEKEIKDVRINFFVSNDKGTSFAEWNIDHPKLGSAGGIITNIVTSSDNFVLKGVEAFDNICKNETPSDISLSGSCGAGTVKLVSDNGNKGSFSSDVKCG*
Ga0157321_100046813300012487Arabidopsis RhizosphereNDKGTSFAEWNIDHQKLGSAGGIISNIKISSDNFVLKGVEDFDNICKNETPSDISLSGSCGAGTVKLVSDNGNKGSFSSDVKCG*
Ga0157343_100120613300012488Arabidopsis RhizosphereIKDVRINFFVSNDKGTSFAEWNIDHPKLGSAGGIITNIVTSSDNFVLKGVEAFDNICKNETPSDISLSDSCGAGIVKLVSDNGNKGSFSSDVKCG*
Ga0157313_100078713300012503Arabidopsis RhizosphereTIKFSVSNDKGTSFAEWNIDHPKLGSADGIISNIMTSSDNFVLKGVEAFDNICKNETPSDISLSGSCGAGIVKLVSDNGNKGSFSSDVKCG*
Ga0157313_106570113300012503Arabidopsis RhizosphereVKGVRINFFVSYDEETPFAEWNMDHKELGSAGGMITNVKTSSDSFVLKGFEAFDSICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG*
Ga0157354_100651013300012517Unplanted SoilWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNEIPSDISLSGSCGAGTVKLVSDNGNKGSFSSDVKCG*
Ga0164300_1000008423300012951SoilVSNDKGTSFAEWNIDHPKLGSADGIISNIMTSSDNFVLKGVEAFDNICKNETPSDISLSGSCGAGTVKLVSDNGNKGSFSSDVKCS*
Ga0164298_1004673413300012955SoilIKDVRINFFVSNDKGTSFAEWNIDHPKLGSACGIISNNMTSSDNFVLKGVEAFDNICKNETPSDISLSDSCGAGIVKPVSDNGNKGSFSSDVKCG*
Ga0164303_1000135263300012957SoilVSNDKGTSFAEWNIDHPKLGSADGIISNIMTSSDNFVLKGVEAFDNICKNETPSDISLSGSCGAGTVKLVYDNGNKGSFSSDVKCG*
Ga0164299_1001285653300012958SoilVSNDKGTPFAEWNIDHPKLGSACGIISNIMTSSDNFVLKGVEAFDNICKNETPSDISLSDSCGAGIVKPVSDNGNKGSFSSDVKCG*
Ga0164302_1010710023300012961SoilVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICNNETPSDISLSGSCGAGTVKLVSDNGNKGSFSSDVKCS*
Ga0134075_1032927623300014154Grasslands SoilGKQIKGVRINFFVSYDKGTSFAEWNIDHQKLGSSGGIITKIKASSDGFVLKGVEAFDNICNNQTPSDINLSGNCGAGTVRLVSDNGNKGTFTSNVKCG*
Ga0134089_1031013613300015358Grasslands SoilLAQELELKSVGKGTISCEGGEEIKSVRINFFVSYNKGTSFAEWNIDHQKLGSSGGIITKIKASSDGFVLKGVEAFDNICNNQTPSDINLSGNCGAGTVRLVFDNGNKGTFTSNVKCA*
Ga0132255_10394357423300015374Arabidopsis RhizosphereVSYDKGTSFTE*NIDHQKLGSAG*FITKIKTSSDGFVLKGVEAFDNICNNETPSEINLSGNCGAGTVRLVSDNRNKGTFISNVKCG*RLLKL*
Ga0184632_1033957413300018075Groundwater SedimentISCDGGELVEGVRINFFVSNDKGTSFAEWNIDHEKLGSAGGIITKVKTSSSGFVLKGVEAFDNICNNQTPSDIDLTGHCGAGTVRLVSDNGNKGTFTSNVKCG
Ga0184612_1005231913300018078Groundwater SedimentVGKGAISCGNGEEVKGVRINFFVSYDKGTPFAEWNVDHKELGSAGGMITNVKTSSNSFVLKGFEAFDNICDVETPSDIKLSGNCGEGTVSLVSDNGNKGTFASNVKCG
Ga0184612_1019547913300018078Groundwater SedimentGKGDISCDGGELVEGVRINFFVSNDKGTSFAEWNIDHEKLGSAGGIITKVKTSSSGFVLKGIEAFDNICDNQTPSDIDLTGHCGAGTVRLVSDNGNKGSFTSNVKCG
Ga0184612_1054671913300018078Groundwater SedimentGKGDISCDGGELVEGVRINFFVSNDKGTSFAEWNIDHEKLGSAGGIITKVKTSSSGFVLKGVEAFDNICNNQTPSDIDLTGHCGAGTVRLVSDNGNKGTFTSNVKCG
Ga0190270_1067418423300018469SoilGEEIKGVRINFFVSYDQGTSFAEWNIDHEKFGSSGGIITNIEASSNTFVLKGVEAFDNICDNETPSDINLSGHCGSGTVRLLSDNGNKGTFTSNVKCS
Ga0193705_100350523300019869SoilVSYDEGTPFAQWNVDHKELGSAGGMITSVKTSSNSFVLKGFEAFDNICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG
Ga0193735_104902423300020006SoilGKGTISCEGGEEIKGVRINFFVSHDKGTSFAEWNIDHQKLGSAGGIITKIKTSSDGFVLKGVEAFDNICNNETPSDINLSGNCGAGTVRLVFDNGNKGTFTSNVKCG
Ga0210379_1022096713300021081Groundwater SedimentGEEVKGVRINFFVSYDEGTPFAEWNVDHKELGSAGGMITSVKTSSDSFVLKGFEAFDNICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG
Ga0247787_101430013300022893SoilFVSYDEETPFAEWNMDHKEMGSAGGMITNVKTSSDSFVLKGFEAFDSICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG
Ga0247800_108352223300023263SoilAISCGNGEEVKGVRINFFVSYDEETPFAEWNMDHKELGSAGGMITNVKTSSDSFVLKGFEAFDSICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG
Ga0207673_104587023300025290Corn, Switchgrass And Miscanthus RhizosphereINFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS
Ga0210115_102995313300025791Natural And Restored WetlandsGEEIKGVRINFFVSYDKGTSFAEWNIDHEKFGSSGGIITNIQASSNSFVLKGVEAFDNICDNETPADINLSGHCGSGTVRLLSDNGNKGTFTSNVKCS
Ga0207645_1015975513300025907Miscanthus RhizosphereINFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIMTSSDNFVLKGVEAFDNICKNETPSDISLSGSCGAGIVKLVSDNGNKGSFSSDVKCG
Ga0207671_1022329223300025914Corn RhizosphereVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCSXFSWILDEIIKSNQYDLDYGR
Ga0207662_10000138333300025918Switchgrass RhizosphereVRINFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS
Ga0207650_1012235833300025925Switchgrass RhizosphereGNGEEIKGVRINFFVSYDGGTPFAEWNLDHKEMGSAGGMITSVKTSSNGFVLKGFEAFDNICNVETPSDVKLSGNCGEGTVRLVSDNGNKGTFTSNVKCG
Ga0207659_1007717923300025926Miscanthus RhizosphereVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS
Ga0207639_1153603423300026041Corn RhizosphereVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCGXFSWILDEIIKSNQYDLDYGR
Ga0207702_1226778013300026078Corn RhizosphereVSNDKGTSFAEWNIDHPKLGSAGGIISNIMTSSDNFVLKGVEAFDNICKNETPSDISLSGSCGAGIVKLVSDNGNKGSFSSDVKCDLVGS
Ga0207674_1055193313300026116Corn RhizosphereNFFVSYDGGTPFAEWNMDHKELGSAGGMITNVKTSSNSFVLKGFEAFDNICDVETPSDVKLSGNCGEGTVSLVSDNGNKGTFASNVKCG
Ga0207674_1176531023300026116Corn RhizosphereAEEIELKSVGRGDVSCQGGEEIKNVRIHFFVSHDKGTSFAEWNIDHEKFGSAGGIITGIQASSESFSLKGFEAFDSICDNETPSDIKLSGHCGEGTVKLISDSGNKGTFNSNVKCG
Ga0207675_10005642223300026118Switchgrass RhizosphereVRINFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIMTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS
Ga0207698_1042887813300026142Corn RhizosphereVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDISLSGSCGAGIVKLVSDNGNKGSFSSDVKCGXFSWILDEIIKSNQYDLDNGR
Ga0207588_10252613300026732SoilVELKTVGKGAISCGNGEEVKGVRINFFVSYDEETPFAEWNMDHKELGSAGGMITNVKTSSDSFVLKGFEAFDSICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG
Ga0207585_10021213300026936SoilVKGVRINFFVSYDEETPFAEWNMDHKELGSAGGMITNVKTSSDSFVLKGFEAFDSICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG
Ga0209845_101576023300027324Groundwater SandMTLAKEFELKSVGKGAISCDGGESVEGVRINFFVSYDKGTSFAEWNIDHEKLGSAGGIITKVKTSSSGFVLKGFEAFDNICDNQTPSDIDLSGRCGTGTVRLVSDNGNKGTFT
Ga0209967_100244913300027364Arabidopsis Thaliana RhizosphereRIHFFVSHDKGTSFAEWNIDHEKFGSAGGIITGIQASSESFSLKGFEAFDSICDNETPSDIKLSGHCGEGTVKLISDSGNKGTFSSNVKCG
Ga0209842_107347623300027379Groundwater SandFFVSYDKGTSFAEWNIDHEELGSAGGIITKVKTSSSGFVLKGFEAFDNICDNQTPSDIDLSGHCGTGTVRLVSDNGNKGTFTSNVKCS
Ga0209842_107410523300027379Groundwater SandFFVSYDKGTSFAEWNIDHEELGSAGGIITKVKTSSSGFVLKGFEAFDNICDNQTPSDIDLSGHCGTGTVRLVSDNGNKGTFTSNVKCG
Ga0209899_108065423300027490Groundwater SandSCDGGESVEGVRINFFVSYDKGTSFAEWNIDHEELGSAGGIITKVKTSSSGFVLKGFEAFDNICDNQTPSDIDLSGHCGTGTVRLVSDNGNKGTFTSNVKCS
Ga0209899_108138213300027490Groundwater SandSCDGGESVEGVRINFFVSYDKGTSFAEWNIDHEKLGSAGGIITKVETSSSGFVLKGFEAFDNICDNQTPSDIDLSGHCGTGTVRLVSDNGNKGTFTSNVKCG
Ga0209982_100110463300027552Arabidopsis Thaliana RhizosphereEEIELKSVGRGDVSCQGGEEIKNVRIHFFVSHDKGTSFAEWNIDHEKFGSAGGIITGIQASSESFSLKGFEAFDRICDNETPSDIKLSGHCGEGTVKLISDSGNKGTFSSNVKCG
Ga0209492_126823323300027721Freshwater SedimentTFAEEIELKSVGKGDISCQGGKEIKGVRINFFVSYDKGTSFAEWNIDHEKFGSSGGIITNIQASSNSFVLKGVEAFDNICDNETPADINLSGHCGSGTVRLLSDNGNKGTFTSNVKCS
Ga0209814_1000513963300027873Populus RhizosphereLKSVGKGGISCQGGEEIKDVRINFFVSYDEGTTFAEWNIDHEKFGSSGGIITNIDASSSSFALKGVEAFDNICDNETPADINLSGHCGSGTVRLVSDNGNKGTFMSNVKCS
Ga0209486_1003130113300027886Agricultural SoilCQGGEEIKNVRVSFFVSYDKGTSLAEWNIDHEKFGSAGGIITSIQASSESFSLKGFEAFDNICDNETPSDIKLSGHCGPGTVKLVSDNGNKGTFTSNVKCG
Ga0207428_1090937613300027907Populus RhizosphereEVKGVRINFFVSYDGGTPFAEWNMDHKELGSAGGMITNVKTSSNSFVLKGFEAFDNICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG
(restricted) Ga0255310_1017630513300031197Sandy SoilRINFFVSNDKGTTFAEWNMDHKELGSAGGMINDVKTSSNSFVLKGFEAFDNICDVETPSDVSLSGNCGEGTVRLVSDNGNKGSFASNVKCG
Ga0310888_1009287613300031538SoilEVKGVRINFFVSYDEETPFAEWNMDHKELGSAGGMITNVKTSSDSFVLKGFEAFDSICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG
Ga0310893_1001113353300031892SoilIKDVRINFFVSNDKGTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS
Ga0310897_1001448253300032003SoilEEVKGVRINFFVSYDEETPFAEWNMDHKELGSAGGMITNVKTSSDSFVLKGFEAFDSICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG
Ga0307470_1096246523300032174Hardwood Forest SoilRINFFVSYDTGTSFAEWNIDHQKLGSAGGIITKIKTSSDGFVLKGVEAFDNICINEKPSDINLSGNCGAGIVRLVSDNGNKGTFISNVKCGXRLLIL
Ga0310810_1006068883300033412SoilTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNEIPSDISLSGSCGGAGTVKLVSDNGNKGSFSSDVKCG
Ga0310810_1048992443300033412SoilTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDISLSGSCGAGTVKLVSDNGNKGSFSSDVKCS
Ga0373958_0025697_319_5973300034819Rhizosphere SoilVRINFFVSNDKGTSFAEWNIDHPKLGSAGGIISSIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS
Ga0373959_0009868_3_2453300034820Rhizosphere SoilTSFAEWNIDHPKLGSAGGIISNIKTSSDNFVLKGVEAFDNICKNETPSDINLSGSCGAGTVKLVSDNGNKGSFSSDVKCS


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