Metagenome / Metatranscriptome Family F084079

Basic Information
Family ID	F084079
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	74 residues
Representative Sequence	GIAPCHGYDGNGYTVGDRVELHPGTDLWMRGARYGNVVGMRLTPNDRVIVKIDRTGRKVSGSEDTFRRV
Number of Associated Samples	86
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (20.536 % of family members)
Environment Ontology (ENVO)	Unclassified (54.464 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (40.179 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.31% β-sheet: 27.84% Coil/Unstructured: 61.86%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
b.34.20.1: YorP-like	d2heqa1	2heq	0.71
b.34.20.1: YorP-like	d2heqa1	2heq	0.71
b.34.4.4: Electron transport accessory proteins	d3hhtb_	3hht	0.68
b.34.4.4: Electron transport accessory proteins	d3hhtb_	3hht	0.68
b.34.5.4: Translation proteins SH3-like domain	d1nppa2	1npp	0.67
b.34.11.2: Prokaryotic SH3-related domain	d2akka1	2akk	0.67
b.34.5.4: Translation proteins SH3-like domain	d1nppa2	1npp	0.67
b.34.11.2: Prokaryotic SH3-related domain	d2akka1	2akk	0.67
b.34.4.0: Electron transport accessory proteins	d6ly5e_	6ly5	0.66
b.34.4.0: Electron transport accessory proteins	d6ly5e_	6ly5	0.66

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF07275	ArdA	2.68
PF13481	AAA_25	0.89
PF00764	Arginosuc_synth	0.89
PF13673	Acetyltransf_10	0.89
PF13884	Peptidase_S74	0.89
PF13384	HTH_23	0.89
PF08774	VRR_NUC	0.89
PF05866	RusA	0.89
PF06356	DUF1064	0.89
PF03237	Terminase_6N	0.89
PF01464	SLT	0.89
PF02092	tRNA_synt_2f	0.89
PF11367	DUF3168	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG4734	Antirestriction protein ArdA	Defense mechanisms [V]	2.68
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	0.89
COG0751	Glycyl-tRNA synthetase, beta subunit	Translation, ribosomal structure and biogenesis [J]	0.89
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	0.89

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300003702\|PicMicro_10000571	Not Available	38058	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.11%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	81.25%
Terrestrial	Environmental → Terrestrial	17.86%
Wastewater	Engineered → Wastewater	0.89%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	68.75%
Soil	Environmental → Terrestrial → Soil	17.86%
Freshwater	Environmental → Aquatic → Freshwater	7.14%
Sediment	Environmental → Aquatic → Sediment	3.57%
Unclassified	Environmental → Aquatic → Unclassified	1.79%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.89%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	39.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	8.93%
Inlet	Environmental → Aquatic → Marine → Inlet	6.25%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.36%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.46%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	3.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.57%
Lake	Environmental → Aquatic → Freshwater → Lake	2.68%
Ice	Environmental → Aquatic → Freshwater → Ice	2.68%
Sediment	Environmental → Aquatic → Marine → Sediment	2.68%
Clay	Environmental → Terrestrial → Soil → Clay	2.68%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.79%
Gulf	Environmental → Aquatic → Marine → Gulf	1.79%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	1.79%
Coastal	Environmental → Aquatic → Marine → Coastal	0.89%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.89%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.89%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.89%
Strait	Environmental → Aquatic → Marine → Strait	0.89%
Loam	Environmental → Terrestrial → Soil → Loam	0.89%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	37.50%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	6.25%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.36%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	4.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.57%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.68%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	2.68%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.68%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.79%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	1.79%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	1.79%
Unclassified	Environmental → Aquatic → Marine → Gulf → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	1.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.79%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.89%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.89%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.89%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.89%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	20.54%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	8.04%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	6.25%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	5.36%
Filtered Seawater	Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater	5.36%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.36%
Marine Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment	3.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.57%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.68%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	2.68%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	2.68%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	2.68%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	2.68%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	1.79%
Marine, Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume	1.79%
Seawater	Environmental → Aquatic → Marine → Gulf → Unclassified → Seawater	1.79%
Beach Aquifer Porewater	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.79%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.89%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Sediment	0.89%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.89%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	0.89%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.89%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.89%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.89%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.89%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.89%
Marine, Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Marine, Hydrothermal Vent Plume	0.89%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.89%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.89%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.89%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	0.89%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001605	Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin	Engineered	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental	Open in IMG/M
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental	Open in IMG/M
3300003690	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assembly	Environmental	Open in IMG/M
3300003702	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Microbial Assembly	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005783	Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten IX	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300007516	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01	Environmental	Open in IMG/M
3300007722	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (megahit assembly)	Environmental	Open in IMG/M
3300007764	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D2_MG	Environmental	Open in IMG/M
3300007769	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D1_MG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009509	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11	Environmental	Open in IMG/M
3300009537	Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - D-2W	Environmental	Open in IMG/M
3300009595	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500	Environmental	Open in IMG/M
3300009622	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012940	Organic Plus compost microbial communities from Emeryville, California, USA - Original compost - Organic plus compost (OP)	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300021332	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.384 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022201	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_21	Environmental	Open in IMG/M
3300022214	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1	Environmental	Open in IMG/M
3300022226	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_13	Environmental	Open in IMG/M
3300024518 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2	Environmental	Open in IMG/M
3300024520 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1	Environmental	Open in IMG/M
3300025043	Marine viral communities from the Subarctic Pacific Ocean - LP-52 (SPAdes)	Environmental	Open in IMG/M
3300025052	Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025236	Marine viral communities from the Deep Pacific Ocean - MSP-144 (SPAdes)	Environmental	Open in IMG/M
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental	Open in IMG/M
3300025257	Marine viral communities from the Deep Pacific Ocean - MSP-134 (SPAdes)	Environmental	Open in IMG/M
3300025274	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300026117	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500 (SPAdes)	Environmental	Open in IMG/M
3300026122	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D2_MG (SPAdes)	Environmental	Open in IMG/M
3300026127	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D1_MG (SPAdes)	Environmental	Open in IMG/M
3300026196	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D2_MG (SPAdes)	Environmental	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental	Open in IMG/M
3300027865 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_21	Environmental	Open in IMG/M
3300027872 (restricted)	Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_9	Environmental	Open in IMG/M
3300027881 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_27	Environmental	Open in IMG/M
3300027976	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01 (SPAdes)	Environmental	Open in IMG/M
3300028018	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600m	Environmental	Open in IMG/M
3300028920	Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-Prop-6N	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031605	Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1	Environmental	Open in IMG/M
3300031623	Marine microbial communities from Western Arctic Ocean, Canada - CB21_32.1	Environmental	Open in IMG/M
3300031673	Soil microbial communities from Risofladan, Vaasa, Finland - TR-3	Environmental	Open in IMG/M
3300031693	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_33.1	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031802	Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032231	Coastal sediment microbial communities from Maine, United States - Cross River worm burrow 1	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033991	Sediment microbial communities from Lake Vrana, Zadar, Croatia - 4 bact	Environmental	Open in IMG/M
3300034628	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2961	Environmental	Open in IMG/M
3300034629	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600	Environmental	Open in IMG/M
3300034654	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244	Environmental	Open in IMG/M
3300034655	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 494_2800	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Draft_100015805	3300001605	Hydrocarbon Resource Environments	MSDTAYGYDGNGYNVNDRVEIHPATDLWMRGARYGTVTRMSLTTADRVRVELDAMPGRTFAGHADTFRRID*
KVRMV2_1011945764	3300002231	Marine Sediment	MAKTFTGFDLNTYRVGDRVEIHPATDLFMRGARYATVVGGRTSSKDRVHVEFDRMPGRTMSGSEDTFKWVADGEG*
JGI25131J35506_10514921	3300002511	Marine	LKQATGYDGNTYTIGDRVELHPATDLWMMGARFGEVVGTSLTPNDRVRVKLDAFPNRKTPFAGSADTFRKV*
JGI25136J39404_10300002	3300002760	Marine	MTTITYTAAEAADRGIAPCHGYDGRGYTIGDRVELHPGTDLWMRGARYGDVVGLSLTPDDRVRVKIDRTGRTIRGSEDTFRRV*
PicViral_100086429	3300003690	Marine, Hydrothermal Vent Plume	MAKIIYTPSEAADRGIAPCHGYDGNGYTVGDRVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVRIDRTGRKISGSEDTFRRV*
PicViral_10031749	3300003690	Marine, Hydrothermal Vent Plume	VAVTMRRYLKLATGYDGSAYTIGDRVELHPGTDLWMMGARYGEVIGMSLTPNDRVRVKLDAFPDRKTPFAGSADTFRKI*
PicMicro_1000057147	3300003702	Marine, Hydrothermal Vent Plume	MAKIIYTPSEAADRGIAPCHGYDGNGYTVGDRVELHPGTDLWMRGARYGDVIGMRLTPNDRVIVRIDRTGRKISGSEDTFRRV*
Ga0055584_1010390883	3300004097	Pelagic Marine	MNTRYFTGYNGKQYKVGDRVEIHPGTDLWMQGARYGVVIGSSITPNDRVKVKMDKLPGRKFSGS
Ga0066388_1013063323	3300005332	Tropical Forest Soil	MTGYDGNGYEVGDRVELHPASDLWMRGARYGVVTGRSTTVRDRVRVRFDLIPNRVFSGAEDFFRRVEA*
Ga0078430_1073433	3300005783	Sediment	MATRQTTFTGFDGNGYCVGDRVQIHPATDLWMRGARYGVVVGSSLTSSDRVKVELDRIPGRTFAGSEDTFKGV*
Ga0098044_11947652	3300006754	Marine	VATGNIFEDATLKHATGYDGNTYTIGDRVEIHPATDLWMMGARFGEVVGTSLTPNDRVRVKLDAFPNRKTPFAGSADTFRKV*
Ga0079217_100079133	3300006876	Agricultural Soil	MNTAYGFDGSGYNVGDRVEIHPGTDLWMRGARYGTVIGISFTPADRVRVEMDKLPGTRVCGHEDTFRRVSA*
Ga0066376_102359492	3300006900	Marine	MTKIIYTPGEAADRGISPCHGYDGNGYTIGDSVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVKIDRTGRKVSGSEDTFRRV*
Ga0105050_102834182	3300007516	Freshwater	MADLIGYDGNGYGIGDRVELHPGTDLWMRGARYGTVTGSSLTSADRVRVQLDAMPGRKFAGHADTFRRID*
Ga0105051_103956992	3300007722	Freshwater	MADLIGYDGSGYGIGDRVELHPGTDLWMRGARYGTVIGSSLTSADRVRVQLDAMPGRKFAGHADTFRRID*
Ga0102950_10044155	3300007764	Soil	MSHETVLIGYDGIPYEKGDRVEVHPSTDLWIRGARYARVIGTSITPDDRVRVRFDVLPQRIFGGSADTFRKIR*
Ga0102952_10649883	3300007769	Soil	YDGIPYEKGDRVEVHPSTDLWIRGARYARVIGTSITPDDRVRVRFDVLPQRIFGGSADTFRKIR*
Ga0102952_10998021	3300007769	Soil	MPKTYDTVYGYDGSGYTVGDRVELHPATDLGMRGVRYGTVTRLSLTPNDRVHVELDKRPGRTFAGSADTFRRVEG*
Ga0114898_10068234	3300008216	Deep Ocean	MTGYDGNSYQIGDRVELHPGTDLWIMGARFGTVIGSSITLNDRVYVKLDKLNGKFAGAEDTFKAI*
Ga0114898_10143825	3300008216	Deep Ocean	MQRYLKLATGYDGSAYTIGDRVELHPGTDLWMMGARYGEVIGMSLTPNDRVRVKLDAFPDRKTPFAGSADTFRKI*
Ga0114905_10119185	3300008219	Deep Ocean	VAVTMQRYLKLATGYDGSAYTIGDRVELHPGTDLWMMGARYGEVIGMSLTPNDRVRVKLDAFPDRKTPFAGSADTFRKI*
Ga0114918_107256972	3300009149	Deep Subsurface	MKDLIGYDGNGYRKGDRVELHPGTDLWMRGARFGIVIGTRPTPDDRVIVELDRIPGRKFSGSADTFRAVL*
Ga0114996_100801462	3300009173	Marine	MTTENIFEDSTLRKATGYDGTEYTIGDRVEIHPETDLWIRVSRYGVVVGMSLTSKDRVHVEMDKFPNRKQPFAGSEDTFRKI*
Ga0114996_101608303	3300009173	Marine	MIKITYTPAEAADRGISPCHGYDGKGYTVGDRVELHPGTDLWMRGARYGDVVGVRLTPNDRVIVKIDRTGRKISGSEDTFRRV*
Ga0114908_11659701	3300009418	Deep Ocean	MTKVRYTAAEASDRGIAPCHGYDGHGYTVGDRVELHPGTDLWMKGARYGDVVGLSLTPNDRVRVKIDRTGHTIHGSEETFRRV*
Ga0118657_126235132	3300009506	Mangrove Sediment	MDALIGYDGNGYAVGDRVELHPGCDLWMRGARYGTVIGTSITKNDRVKVTLDKIPARKFSCAADMLRRVD*
Ga0123573_101813811	3300009509	Mangrove Sediment	MDATATGYDGNGYGIGDRVELHPGTDLWMRGARYGKVIGLSLTPLDRVRVELDAIPGRVFSGSQETFRYVFQD*
Ga0129283_100124032	3300009537	Beach Aquifer Porewater	MATGYDGTEYNVGDRVELHPGTDLWMRGARYGTVVGMSLTPNDRVKVEVDKLPGRKFSGSEDTFRLVS*
Ga0129283_104745262	3300009537	Beach Aquifer Porewater	MSATVYGYDGNGYTVGDRVELHPGTDLWMRGARYGVVVGMRPTPKDRVHVKLDKLPSRTFSGSADTFRPIA*
Ga0105214_1035441	3300009595	Marine Oceanic	AADRGISPCEGYDGNGYTIGDSVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVKIDRTGRKVSGSEDTFRRV*
Ga0105173_10246291	3300009622	Marine Oceanic	MTKIIYTPDEAADRGISPCHGYDGNGYTIGDSVELHPGTDLWMRGARYGNVVGMRLTPNDRVIVKIDR
Ga0105173_10456133	3300009622	Marine Oceanic	STPEAQPMILTSSEAAQRNISPCHGYDTNGYTIGDRVEIHPGTDLWMRGARYGTVVGLSLTPKDRVHVQMDKAGKVSGSEDTFRSLA*
Ga0105173_10495432	3300009622	Marine Oceanic	MNKIAYTAAEAADRGIAPCHGYDGIGYTIGDRVELHPRTDLWMGGARYGEVVGLSLTPDDRVRVRVDRTVLTIRGSEDTFRRVC*
Ga0105173_10924651	3300009622	Marine Oceanic	MILTSSEAAERNISPCHGYDTNGYTIGDRVEIHPGTDLWMRGARYGTVVGLSLTPKDRVHVQMDKAGKVSGSEDTFRSLA
Ga0105252_1000017243	3300009678	Soil	MKTETVYGFDGNGYGIGDRVELHPCTDLWMRGARYGVVVGMSLTPNDRVKVELDARPGQVFAGSADTFRALQE*
Ga0114999_105867512	3300009786	Marine	AMTGYDGNGYGVGDRVEIHPSTDLWMRGARFGVVVGTSLTPADRVRVKLDKLPRRTFAGSADTFRAI*
Ga0126380_106044913	3300010043	Tropical Forest Soil	MTGYDGNGYDVGDRVELHPGSDLWMRGAKFGTVVGSSLTHYDRVRVRLDRIPGKVYCGPADRFRRIPDGGAA*
Ga0126382_113125082	3300010047	Tropical Forest Soil	MTGYDGNGYDVGDRVELHPGCDLWMRGAKFGTVVGASLTHYDRVRVRLDRIPGKVYCGPADRFRRIPDGGAA*
Ga0098061_12858422	3300010151	Marine	VATGNIFEDATLKQATGYDGNTYTIGDRVELHPATDLWMMGARFGEVVGTSLTPNDRVRVKLDAFPNRKTPFAGSADTFKKI*
Ga0126370_1000003111	3300010358	Tropical Forest Soil	MTGYDGNGYDVGDRVELHPGSDLWMRGAKFGTVVGASLTHYDRVRVRLDRIPGKVYCGPADRFRRIPDGGAA*
Ga0126381_1018299264	3300010376	Tropical Forest Soil	MAFYGYDGNGYEIGDRVELHPACDLWMRGCRYGKVVGSSVTVDDRVHVVLDRKAGVYGGREDDFRRVD*
Ga0133547_118720562	3300010883	Marine	MTGYDGNGYGVGDRVEIHPSTDLWMRGARYGVVIGSSLTPKDRVRVKLDKLPRRTFAGSADTFRAI*
Ga0137430_10559564	3300012041	Soil	FDGNGYGIGDRVELHPCTDLWMRGARYGVVVGMSLTPNDRVKVELDARPGQVFAGSADTFRALQE*
Ga0164243_100649621	3300012940	Compost	MAQQQTVIGYDGNGYSVNDRVELHPGTDLWMQGARYGTVKGLSLTPNDRVKVELDKMPGKLFAGSADTFRRI*
Ga0181420_11996161	3300017757	Seawater	MTKIIYTPSEAADRGISPCEGYDGKGYTVGDRVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVRIDRTGRKVSGSEDTFRRA
Ga0181357_11398003	3300017777	Freshwater Lake	MPTETVYGYDGLGYTVGDRVEIHPGTDLWMRGARYGMVVGMSITSSDRVRVVLDRLPARKYSGTADRFRRIE
Ga0211576_103449382	3300020438	Marine	METFTGYDGSQYKIGDRVEISPGTDLWIKGAKYGVVIGSSITPDDRVKVIMDKLPSKKFSGSEDTFAAI
Ga0210339_11306291	3300021332	Estuarine	MKGYDGIEYQVGDRVELHPGCDLWMQGARYGTVVGTSLTSDDRVRVELDRIPGRKFSGPEDRFRKV
Ga0181353_10152903	3300022179	Freshwater Lake	MTHDLIGYDGNGYSIGARVELHPGLDWWMRGARYGTVVGTRSTTDDRVIVTLDAAGDRKFSAPADRFRAI
Ga0224503_101821521	3300022201	Sediment	MDRLRRKEGAIMNVKLIGYDGLPYALGDRVELHPGCDLWMQGARCGTVVGTSLTRADRVRVELDKTPGRTFSGPADRFRKV
Ga0224505_100371183	3300022214	Sediment	MRTFTGYDGNGYNTGDRVELHPGTDLWMRGARYGTVIGSSITPNDRVKVELDAFPGRKFSGSEDTFRRIPE
Ga0224512_101618434	3300022226	Sediment	MVTGYDGKAYVVGDRVEIHPGTDLWMMGARFGVVVGTSLTPIDRVKVRLDKMPKRVFSGPEDRFRGSRG
(restricted) Ga0255048_1000617210	3300024518	Seawater	MARTMTGYDGNGYEIGDRVELHPGTGLWMQGARYGVVTSTRSTPVDRVHVRLDKLPKRLFSGSEDLFKRID
(restricted) Ga0255048_100820572	3300024518	Seawater	MTGYDGNGYGVGDRVELHPGCDLWARGARFGVVVGVSLTTRDRVKVKLDKMPSRLFSGSEDTFRGVI
(restricted) Ga0255048_101605861	3300024518	Seawater	MTTFTGFDGNGYTVGDRIEIHPGTDLWIRGARFGVVIGSSLTPNDRVHVILDKLPKRKFSGSEDTFQRID
(restricted) Ga0255048_105314191	3300024518	Seawater	MTGYDGNSYAVGDRVELHPANDLWTRGARFGVVVRTSLTPKDRVHVKLDKLPRTTFATTEDNLRGIDQ
(restricted) Ga0255047_105355993	3300024520	Seawater	MTTFTGFDGNGYTIGDRIEIHPGTDLWMRGARFGVVIGSSLTPNDRVHVILDKLPKRKFSGSEDTFQRID
Ga0207907_1226502	3300025043	Marine	MTKIIYTPGEAADRGISPCEGYDGNGYTVGDRVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVRIDRTGRKISGSEDTFRRV
Ga0207906_10237162	3300025052	Marine	MTKIIYTPSEAADRGISPCEGYDGNGYTVGDRVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVRIDRTGRKVSGSEDTFRRV
Ga0209644_10074623	3300025125	Marine	MAKITYTAAEAADRGIAPCHGYDGNGYTIGDRVELHPGTDLWMRGALYGDVVGLSLTPNDRVRVKIDRTGRTIRGSEDTFRRV
Ga0209644_10667921	3300025125	Marine	VATGNIFEDATLKQATGYDGNTYTIGDRVELHPATDLWMMGARFGEVVGTSLTPNDRVRVKLDAFPNRKTPFAGSADTFRKV
Ga0209644_10713141	3300025125	Marine	MTKITYTATEAADRGITPCHGYDGHGYTIGDRVELHPGTDLWMMGARYGDVVGLSLTPNDRVRVKIDRTGQTICGSEETFRRV
Ga0207884_10270972	3300025236	Deep Ocean	MTKVRYTAHEASNKGISPCYGYDGNGYTVGDRVELHPGTDLWMRGARYGDVVGLSITPNDRVRVKIDRTGRTISGSEDTFRRV
Ga0208182_100201812	3300025251	Deep Ocean	VAVTMQRYLKLATGYDGSAYTIGDRVELHPGTDLWMMGARYGEVIGMSLTPNDRVRVKLDAFPDRKTPFAGSADTFRKI
Ga0207899_10312413	3300025257	Deep Ocean	MTEIIYTPSEAADRGIAPCHGYDGNGYTVGDRVELHPGTDLWMRGARYGNVVGMRLTPNDRVIVKIDRTGR
Ga0207899_10462632	3300025257	Deep Ocean	MARIIYTPDEAADRGISPCEGYDGNGYTIGDSVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVKIDRTGRKVSGSEDTFRRV
Ga0208183_10132531	3300025274	Deep Ocean	MTGYDGNSYQIGDRVELHPGTDLWIMGARFGTVIGSSITLNDRVYVKLDKLNGKFAGAEDTFKAI
Ga0209757_100180761	3300025873	Marine	VTTGNIFEDATLKQATGYDGNTYTIGDRVELHPATDLWMMGARFGEVVGTSLTPNDRVRVKLDAFPNRKTPFAGSADTFRKV
Ga0209757_100347142	3300025873	Marine	MTKIIYTPSEAADRGVSPCQGYDGYGYTIGNRVVSHPGTDLWMRGARYGEVVGLRLTPNDRVIVRIDRTGRKVSGSEDTFRRV
Ga0209757_100539251	3300025873	Marine	MTKITYTATEAADRGITPCHGYDGHGYTIGDRVELHPGTDLWMMGARYGDVVGLSLTPNDRVRVKIDRTGHTICGSEETFRRV
Ga0209757_100685703	3300025873	Marine	MAKITYTAAEAADRGIAPCHGYDGNGYTIGDRVELHPGTDLWMRGARYGDVVGLSLTPNDRVRVKIDRTGRTIRGSEDTFRRV
Ga0209757_101418151	3300025873	Marine	EAADRGIAPCHGYDGRGYTIGDRVELHPGTDLWMRGARYGDVVGLSLTPDDRVRVKIDRTGRTIRGSEDTFRRV
Ga0208317_10045423	3300026117	Marine Oceanic	GIAPCHGYDGNGYTVGDRVELHPGTDLWMRGARYGNVVGMRLTPNDRVIVKIDRTGRKVSGSEDTFRRV
Ga0209926_10020639	3300026122	Soil	MSHETVLIGYDGIPYEKGDRVEVHPSTDLWIRGARYARVIGTSITPDDRVRVRFDVLPQRIFGGSADTFRKIR
Ga0209956_11009121	3300026127	Soil	MPKTYDTVYGYDGSGYTVGDRVELHPATDLGMRGVRYGTVTRLSLTPNDRVHVELDKRPGRTFAGSADTFRRVEG
Ga0209919_11087341	3300026196	Soil	TVYGYDGSGYTVGDRVELHPATDLGMRGVRYGTVTRLSLTPNDRVHVELDKRPGRTFAGSADTFRRVEG
Ga0208454_100037625	3300027573	Soil	MKTETVYGFDGNGYGIGDRVELHPCTDLWMRGARYGVVVGMSLTPNDRVKVELDARPGQVFAGSADTFRALQE
Ga0209818_10088572	3300027637	Agricultural Soil	MNTAYGFDGSGYNVGDRVEIHPGTDLWMRGARYGTVIGISFTPADRVRVEMDKLPGTRVCGHEDTFRRVSA
Ga0209501_100405995	3300027844	Marine	MTTENIFEDSTLRKATGYDGTEYTIGDRVEIHPETDLWIRVSRYGVVVGMSLTSKDRVHVEMDKFPNRKQPFAGSEDTFRKI
(restricted) Ga0255052_100915691	3300027865	Seawater	MSTFTGFDGNGYTIGDRIEIHPGTDLWMRGARFGVVIGSSLTPNDRVHVILDKLPKRKFSGSEDTFQRID
(restricted) Ga0255058_102057682	3300027872	Seawater	MTTVYGYDGNGYATGDRVELHPGTDLWMRGARFGEVIGISLTPADRVRVTLDKRPGRIFASYAESFRRIG
(restricted) Ga0255058_102724101	3300027872	Seawater	MTTLYGFDGNGYTVGDRVEIHPGTDYWMRGARFGTVVRTSLTPKDRVHVKLDKISQVVAGTADTFQRI
(restricted) Ga0255055_105733881	3300027881	Seawater	MTTFTGFDGNGYTIGDRIEIHPGTDLWMRGARFGVVIGASLTPNDRVHVILDNLPKRKFSCSEDTFQRID
Ga0209702_101771812	3300027976	Freshwater	MADLIGYDGNGYGIGDRVELHPGTDLWMRGARYGTVTGSSLTSADRVRVQLDAMPGRKFAGHADTFRRID
Ga0256381_10451021	3300028018	Seawater	MTKVRYTAAEASDRGIAPCHGYDGHGYTVGDRVELHPGTDLWMRGARYGEVVGLSITLPSDRIGRNDRVRVKIDRTGHTICGSEETFRRV
Ga0272441_100603019	3300028920	Marine Sediment	MERTVYGYDGNGYWVGDRVELHPGTDLWMRGARYGQVVGIVPTPADRVRVVLDKIPGRTFAGSADTFRAI
Ga0272441_101945821	3300028920	Marine Sediment	METTVYGYDGSGYGVGDRVELHPGTDLWMRGARYGEVVGISATPADRVRVKLDKLPSRVFAGHAETFRRVD
Ga0272441_102065852	3300028920	Marine Sediment	MERTVYGYDGNGYRVGDRVELHPGTDLWMRGARYGQVVGVVPTPADRVRVVLDKIPGRTFAGSADTFRAI
Ga0272441_103608671	3300028920	Marine Sediment	MKTHTGYDGNGYGIGDRVEIHPGTDLWIRGARYGTVVGSSLTPLDRVKVEMDKLPGRIFAATEDTFKAV
Ga0307380_110934831	3300031539	Soil	MSTLYGYDGNGYQVGDRVELHPGTDLWMRGARYGLVVGTSLTPNDRVKVRLDKLPKRLFSGSQDTFAKI
Ga0302132_100444315	3300031605	Marine	MIKITYTPAEAADRGISPCHGYDGKGYTVGDRVELHPGTDLWMRGARYGDVVGVRLTPNDRVIVKIDRTGRKISGSEDTFRRV
Ga0302123_101736693	3300031623	Marine	MTGYDGNGYGVGDRVEIHPSTDLWMRGARYGVVIGSSLTPKDRVRVKLDKLPRRTFAGSADTFRAI
Ga0307377_103396712	3300031673	Soil	MTGYDGNGYDVGDRVELHPGTDLWMRGARYGVVVGRSLTPKDRVRVVLDKLPNRTFGGSENTFRYAG
Ga0307377_103402624	3300031673	Soil	MTGYDGNGYDVGDRVELHPGTDLWMRGARYGTVVGQVPTPKDRVRVELDKFPGRRFSGSEDTFRYVG
Ga0302139_102878301	3300031693	Marine	GDAMTGYDGNGYGVGDRVEIHPSTDLWMRGARYGVVIGSSLTPKDRVRVKLDKLPRRTFAGSADTFRAI
Ga0318552_104128134	3300031782	Soil	GYDGNGYNVGDRIELHPGCDLWMRGARYGTVVARIDTPRARVRVRLDARPGRLYSGQEDDFRRID
Ga0310123_102388893	3300031802	Marine	MTKIIYTPDEAADRGISPCHGYDGNGYTVGDRVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVKIDRTGRKVSGSEDTFRRV
Ga0306921_104329205	3300031912	Soil	MTGYDGNGYNVGDRIELHPGCDLWMRGARYGTVVARIDTPRARVRVRLDARPGRLYSGQEDDFRRID
Ga0315278_104692251	3300031997	Sediment	MTTFYGYDGNGYNIGDRVELHPGTDLWMRGARYGRVVGSSSTPSDRVHVKLDRLARKLAGPESNFRRIA
Ga0310344_102428592	3300032006	Seawater	MPNNYATGYDGNTYTIGDRVELHPGTDLWMRGARFGEVIAMNSPHNDRVRVKLDAFPNRKAPFSGPANRFKFIGQS
Ga0306924_106803115	3300032076	Soil	RMTGYDGNGYNVGDRIELHPGCDLWMRGARYGTVVARIDTPRARVRVRLDARPGRLYSGQEDDFRRID
Ga0316187_106540583	3300032231	Worm Burrow	VGDRVEIHPGTDQWMMGARYGTVVGMSITPNGRIKVELDKIPGRKFAGSADTFRAV
Ga0310342_1018311702	3300032820	Seawater	MFKGYDGNSYEVGDRVELHPATDLWMRGARFGVVVGSSLTPKDRVRVRLDKLPKTTFGASEDTFRAI
Ga0310342_1030821952	3300032820	Seawater	NNYATGYDGNTYTIGDRVELHPGTDLWMMGARFGEVIGMSLTHNDRVRVKLDAFPNRKTPFSGPANRFKFIGQS
Ga0334722_107075702	3300033233	Sediment	VPLLEECDAMSDVYGYDGSGYSVGDRVELHPATDLWMRGARYATVVRISLTPNDRVTVELDQPYLRGRRFSGSADTFRVVPTR
Ga0334965_0327652_86_301	3300033991	Sediment	MTMNKFIGYDGKLYHVGDRVELHPGCDLWMQGAKYGVVVGQSQTKEDRVKVILDKLPKRKFSCPEDRLRKI
Ga0326755_024134_125_373	3300034628	Filtered Seawater	VATGNIFEDATLKLATGYDGSAYTIGDRVELHPGTDLWMMGARYGEVIGMSLTPNDRVRVKLDAFPDRKTPFAGSADTFRKI
Ga0326756_005846_838_1065	3300034629	Filtered Seawater	MRRYLKLATGYDGSAYTIGDRVELHPGTDLWMMGARYGEVIGMSLTPNDRVRVKLDAFPDRKTPFAGSADTFRKI
Ga0326741_030208_1_237	3300034654	Filtered Seawater	YTPDEAADRGISPCEGYDGNGYTIGDSVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVKIDRTGRKVSGSEDTFRRV
Ga0326741_054485_196_417	3300034654	Filtered Seawater	MATVTGYDGYGYTVGDRVEIHPGTDLWMQGARYGTVVRMSPTPADRVHVKLDKLPDHTFAGHEDTFRLANLFG
Ga0326741_054975_107_358	3300034654	Filtered Seawater	MTKVRYTAHEASNTGISPCYGYDGNGYTVGDRVELHPGTDLWMRGARYGDVVGLSITPNDRVRVKIDRTGRTISGSEDTFRRV
Ga0326746_005172_61_288	3300034655	Filtered Seawater	MQRYLKLATGYDGSAYTIGDRVELHPGTDLWMMGARYGEVIGMSLTPNDRVRVKLDAFPDRKTPFAGSADTFRKI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084079

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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