Metagenome / Metatranscriptome Family F083876

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083876
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	98 residues
Representative Sequence	MKERSNIQQPWHGVVNIERDGSRYVVRDLLVRWNEQTEEKETEDGTEIEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAILQLAQDLEAQEAGFQ
Number of Associated Samples	42
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.54 %
% of genes near scaffold ends (potentially truncated)	32.14 %
% of genes from short scaffolds (< 2000 bps)	73.21 %
Associated GOLD sequencing projects	33
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.179 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate (31.250 % of family members)
Environment Ontology (ENVO)	Unclassified (91.071 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (49.107 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.81% β-sheet: 36.51% Coil/Unstructured: 39.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.37.1.12: ABC transporter ATPase domain-like	d1qhla_	1qhl	0.50685

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00078	RVT_1	15.18
PF03161	LAGLIDADG_2	8.04
PF06152	Phage_min_cap2	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.18 %
All Organisms	root	All Organisms	34.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.18 %
cellular organisms	root	All Organisms → cellular organisms	34.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	17.86 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	16.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.18 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	16.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.61 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.18 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	16.96 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	11.61 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.79 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.18 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	16.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	11.61 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	1.79 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.18 %
Methanotrichales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales	13.39 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	11.61 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	1.79 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	1.79 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.18 %
Methanotrichaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae	13.39 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	11.61 %
unclassified Phycisphaerales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales	1.79 %
Methanosarcinaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae	1.79 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.18 %
Methanothrix	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	13.39 %
Smithella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella	11.61 %
Methanomethylovorans	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanomethylovorans	1.79 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1.79 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.18 %
unclassified Methanothrix	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix	13.39 %
unclassified Smithella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella	11.61 %
Methanomethylovorans hollandica	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanomethylovorans → Methanomethylovorans hollandica	1.79 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1.79 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.18 %
Smithella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	11.61 %
Methanosaeta sp. PtaU1.Bin060	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	8.04 %
Methanosaeta sp. PtaU1.Bin028	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin028	5.36 %
Methanomethylovorans hollandica DSM 15978	strain	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanomethylovorans → Methanomethylovorans hollandica → Methanomethylovorans hollandica DSM 15978	1.79 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1.79 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000032\|Draft_c0017380	All Organisms → cellular organisms → Bacteria	2588	Open in IMG/M
3300000032\|Draft_c0019560	Not Available	4262	Open in IMG/M
3300000032\|Draft_c0038652	Not Available	2218	Open in IMG/M
3300000032\|Draft_c0040239	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin028	3118	Open in IMG/M
3300000032\|Draft_c0053985	Not Available	1963	Open in IMG/M
3300000032\|Draft_c0084300	Not Available	700	Open in IMG/M
3300000032\|Draft_c0420902	Not Available	616	Open in IMG/M
3300000032\|Draft_c0468534	Not Available	507	Open in IMG/M
3300000032\|Draft_c0527488	Not Available	717	Open in IMG/M
3300000558\|Draft_10030326	Not Available	4252	Open in IMG/M
3300000558\|Draft_10076828	Not Available	574	Open in IMG/M
3300000558\|Draft_10118769	Not Available	830	Open in IMG/M
3300000558\|Draft_10182677	Not Available	629	Open in IMG/M
3300000558\|Draft_10257546	Not Available	962	Open in IMG/M
3300000558\|Draft_11522179	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanomethylovorans → Methanomethylovorans hollandica → Methanomethylovorans hollandica DSM 15978	836	Open in IMG/M
3300000558\|Draft_11709975	Not Available	1356	Open in IMG/M
3300001605\|Draft_10094161	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	2221	Open in IMG/M
3300001605\|Draft_10707268	Not Available	502	Open in IMG/M
3300002220\|MLSBCLC_10009604	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	820	Open in IMG/M
3300002220\|MLSBCLC_10009605	Not Available	534	Open in IMG/M
3300002220\|MLSBCLC_10009633	Not Available	764	Open in IMG/M
3300002220\|MLSBCLC_10053319	Not Available	1003	Open in IMG/M
3300002220\|MLSBCLC_10115212	Not Available	5081	Open in IMG/M
3300002446\|NAPDCCLC_10022081	Not Available	1827	Open in IMG/M
3300002446\|NAPDCCLC_10071084	Not Available	1520	Open in IMG/M
3300002596\|draft_1361512	Not Available	750	Open in IMG/M
3300002703\|draft_10996733	Not Available	1069	Open in IMG/M
3300002703\|draft_11038468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	1652	Open in IMG/M
3300002821\|Iso3TCLC_10004694	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	17879	Open in IMG/M
3300006840\|Ga0101790_144737	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	12798	Open in IMG/M
3300009542\|Ga0116234_1033624	Not Available	2445	Open in IMG/M
3300009542\|Ga0116234_1047091	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	973	Open in IMG/M
3300009542\|Ga0116234_1118510	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	732	Open in IMG/M
3300009642\|Ga0123331_1118499	Not Available	835	Open in IMG/M
3300009647\|Ga0123326_1007506	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin028	6124	Open in IMG/M
3300009666\|Ga0116182_1018494	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	4741	Open in IMG/M
3300009666\|Ga0116182_1143396	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanomethylovorans → Methanomethylovorans hollandica → Methanomethylovorans hollandica DSM 15978	1130	Open in IMG/M
3300009666\|Ga0116182_1157551	Not Available	1056	Open in IMG/M
3300009666\|Ga0116182_1206492	Not Available	867	Open in IMG/M
3300009669\|Ga0116148_1306715	Not Available	648	Open in IMG/M
3300009670\|Ga0116183_1124972	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	1307	Open in IMG/M
3300009673\|Ga0116185_1492156	Not Available	501	Open in IMG/M
3300009674\|Ga0116173_1273988	Not Available	762	Open in IMG/M
3300009674\|Ga0116173_1407634	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	586	Open in IMG/M
3300009675\|Ga0116149_1133757	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	1222	Open in IMG/M
3300009681\|Ga0116174_10111406	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	1476	Open in IMG/M
3300009681\|Ga0116174_10237082	Not Available	902	Open in IMG/M
3300009681\|Ga0116174_10575894	Not Available	506	Open in IMG/M
3300009682\|Ga0116172_10276713	Not Available	829	Open in IMG/M
3300009770\|Ga0123332_1298258	Not Available	651	Open in IMG/M
3300010310\|Ga0116235_1081006	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	712	Open in IMG/M
3300010346\|Ga0116239_10119554	Not Available	2115	Open in IMG/M
3300010346\|Ga0116239_10603491	Not Available	713	Open in IMG/M
3300010351\|Ga0116248_10372773	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	1082	Open in IMG/M
3300010365\|Ga0116251_10137077	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1564	Open in IMG/M
3300014203\|Ga0172378_10342931	Not Available	1140	Open in IMG/M
3300014203\|Ga0172378_11206392	Not Available	535	Open in IMG/M
3300014204\|Ga0172381_10078645	Not Available	2764	Open in IMG/M
3300014204\|Ga0172381_10092728	Not Available	2514	Open in IMG/M
3300014204\|Ga0172381_10109889	Not Available	2278	Open in IMG/M
3300014204\|Ga0172381_10272455	Not Available	1348	Open in IMG/M
3300014204\|Ga0172381_10358058	Not Available	1148	Open in IMG/M
3300014204\|Ga0172381_10518476	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	919	Open in IMG/M
3300014204\|Ga0172381_10575919	Not Available	863	Open in IMG/M
3300014204\|Ga0172381_10610018	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	834	Open in IMG/M
3300014204\|Ga0172381_10821187	Not Available	696	Open in IMG/M
3300014204\|Ga0172381_10935145	Not Available	643	Open in IMG/M
3300014204\|Ga0172381_11050127	Not Available	599	Open in IMG/M
3300014204\|Ga0172381_11066388	Not Available	594	Open in IMG/M
3300014204\|Ga0172381_11197323	Not Available	554	Open in IMG/M
3300014204\|Ga0172381_11244898	Not Available	541	Open in IMG/M
3300014204\|Ga0172381_11283615	Not Available	531	Open in IMG/M
3300014205\|Ga0172380_10075781	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	2776	Open in IMG/M
3300014205\|Ga0172380_10129016	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	2025	Open in IMG/M
3300014205\|Ga0172380_10280547	Not Available	1274	Open in IMG/M
3300014205\|Ga0172380_10405872	Not Available	1020	Open in IMG/M
3300014205\|Ga0172380_10607334	Not Available	799	Open in IMG/M
3300014205\|Ga0172380_10617862	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	790	Open in IMG/M
3300014205\|Ga0172380_10923355	Not Available	621	Open in IMG/M
3300014205\|Ga0172380_10946658	Not Available	612	Open in IMG/M
3300014206\|Ga0172377_10345393	Not Available	1248	Open in IMG/M
3300014206\|Ga0172377_10699849	Not Available	804	Open in IMG/M
3300014206\|Ga0172377_10790623	Not Available	745	Open in IMG/M
3300014206\|Ga0172377_11105163	Not Available	607	Open in IMG/M
3300014206\|Ga0172377_11242079	Not Available	565	Open in IMG/M
3300015214\|Ga0172382_10940113	Not Available	579	Open in IMG/M
3300019239\|Ga0180030_1147785	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin028	6429	Open in IMG/M
3300019239\|Ga0180030_1194959	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	4143	Open in IMG/M
3300020072\|Ga0180031_1005295	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin028	2188	Open in IMG/M
3300025713\|Ga0208195_1133082	Not Available	842	Open in IMG/M
3300025713\|Ga0208195_1194488	Not Available	630	Open in IMG/M
3300025737\|Ga0208694_1025579	Not Available	3216	Open in IMG/M
3300025737\|Ga0208694_1048864	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	1924	Open in IMG/M
3300025748\|Ga0208459_1155775	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	816	Open in IMG/M
3300026194\|Ga0209509_1008036	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin028	4642	Open in IMG/M
(restricted) 3300028561\|Ga0255343_1005494	All Organisms → cellular organisms → Bacteria	11792	Open in IMG/M
(restricted) 3300028564\|Ga0255344_1002358	All Organisms → cellular organisms → Bacteria	23090	Open in IMG/M
3300028601\|Ga0265295_1020236	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin028	5509	Open in IMG/M
3300028601\|Ga0265295_1081816	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	1707	Open in IMG/M
3300028601\|Ga0265295_1102541	Not Available	1412	Open in IMG/M
3300028602\|Ga0265294_10038814	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	4442	Open in IMG/M
3300028602\|Ga0265294_10046484	Not Available	3933	Open in IMG/M
3300028602\|Ga0265294_10062021	Not Available	3228	Open in IMG/M
3300028602\|Ga0265294_10096841	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	2381	Open in IMG/M
3300028602\|Ga0265294_10135176	Not Available	1891	Open in IMG/M
3300028602\|Ga0265294_10231911	Not Available	1293	Open in IMG/M
3300028602\|Ga0265294_10486560	Not Available	754	Open in IMG/M
3300028602\|Ga0265294_10541868	Not Available	697	Open in IMG/M
3300029288\|Ga0265297_10243221	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	1285	Open in IMG/M
3300029288\|Ga0265297_10354814	Not Available	999	Open in IMG/M
3300029288\|Ga0265297_10742113	Not Available	608	Open in IMG/M
3300029825\|Ga0134835_1029258	All Organisms → cellular organisms → Bacteria	1905	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	91.07%
Environmental	Environmental	8.93%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	35.71%
Solid Waste	Engineered → Solid Waste	31.25%
Bioreactor	Engineered → Bioreactor	11.61%
Lab Enrichment	Engineered → Lab Enrichment	10.71%
Aquatic	Environmental → Aquatic	8.93%
Built Environment	Engineered → Built Environment	1.79%

Habitat	Taxonomy	Distribution
Landfill	Engineered → Solid Waste → Landfill	31.25%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	20.54%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	15.18%
Defined Media	Engineered → Lab Enrichment → Defined Media	10.71%
Anaerobic	Engineered → Bioreactor → Anaerobic	9.82%
Freshwater	Environmental → Aquatic → Freshwater	8.93%
Water Treatment Plant	Engineered → Built Environment → Water Treatment Plant	1.79%
Unclassified	Engineered → Bioreactor → Unclassified	0.89%
Continuous Culture	Engineered → Bioreactor → Continuous Culture	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	31.25%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	20.54%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	15.18%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	10.71%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	9.82%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	8.93%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified	1.79%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	0.89%
Marine Sediment Inoculum	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	31.25%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	20.54%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	15.18%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	10.71%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	9.82%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	8.93%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified	1.79%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	0.89%
Unclassified	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	31.25%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	20.54%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	15.18%
Hydrocarbon Resource Environments	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Hydrocarbon Resource Environments	10.71%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	9.82%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	8.93%
Wastewater	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified → Wastewater	1.79%
Fermentation Pit Mud	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Fermentation Pit Mud	0.89%
Anaerobic Reactor	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Anaerobic Reactor	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000032	Oil sands microbial community from Northern Alberta which degrade Naphthaline	Engineered	Open in IMG/M
3300000558	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011	Engineered	Open in IMG/M
3300001605	Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin	Engineered	Open in IMG/M
3300002220	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011	Engineered	Open in IMG/M
3300002446	Oil sands microbial community from Northern Alberta which degrade Naphthaline	Engineered	Open in IMG/M
3300002596	Hydrocarbon contaminated oil fields microbial communities from Alberta, Canada - Microbes in water sample from Medicine Hat oil field -PW_MHGC_2012April10	Engineered	Open in IMG/M
3300002703	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Oil sands tailings Tailings Pond 5 - 2012TP5	Engineered	Open in IMG/M
3300002821	Iso-alkanes.Hi.seq-Iso3T	Engineered	Open in IMG/M
3300006840	Anaerobic bioreactor microbial communities from Canach, Luxembourg	Engineered	Open in IMG/M
3300009542	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A SIP RNA (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300009642	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C13 SIP DNA	Engineered	Open in IMG/M
3300009647	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA	Engineered	Open in IMG/M
3300009666	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG	Engineered	Open in IMG/M
3300009669	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG	Engineered	Open in IMG/M
3300009670	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG	Engineered	Open in IMG/M
3300009673	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA7_MetaG	Engineered	Open in IMG/M
3300009674	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaG	Engineered	Open in IMG/M
3300009675	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG	Engineered	Open in IMG/M
3300009681	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG	Engineered	Open in IMG/M
3300009682	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC083_MetaG	Engineered	Open in IMG/M
3300009770	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C12 SIP DNA	Engineered	Open in IMG/M
3300010310	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B SIP RNA (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300010346	AD_USMOca	Engineered	Open in IMG/M
3300010351	AD_USPNca	Engineered	Open in IMG/M
3300010365	AD_USDIca	Engineered	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014204	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaG	Engineered	Open in IMG/M
3300014205	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 162 metaG	Engineered	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300015214	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R metaG	Engineered	Open in IMG/M
3300019239	Anaerobic biogas reactor microbial communites from Seattle, Washington, USA - Biogas_R2-A RNA time zero (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300020072	Anaerobic biogas reactor microbial communites from Seattle, Washington, USA - Biogas_R2-B RNA time zero (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300025713	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025737	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025748	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG (SPAdes)	Engineered	Open in IMG/M
3300026194	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300028561 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant16	Engineered	Open in IMG/M
3300028564 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant18	Engineered	Open in IMG/M
3300028601	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Methane capture system biofilm	Engineered	Open in IMG/M
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental	Open in IMG/M
3300029288	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 137-91	Engineered	Open in IMG/M
3300029825	Liquor fermentation pit mud microbial communities from Luzhou, China - Meta-1-2-440-M	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Draft_00173804	3300000032	Hydrocarbon Resource Environments	MKERSNIQPPWHGVVNIERDGSRYIIRDLMVRWNEQTEEKETEDGTEIEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAKDAVLQLAQDLAAQEAGFT*
Draft_00195604	3300000032	Hydrocarbon Resource Environments	MEERSNSLKNWYELGTIEKSGSRWVIKDLLIRWNERTEEKETEDGPIIEYIYDAHRFDYELPAEISPGLEAVELYLETTKDAIVLYAQNLAEQEAGFQ*
Draft_00386524	3300000032	Hydrocarbon Resource Environments	MKEHSHLQLGWRTLGTIEKSGSEWVLKDLLVRWNEQIEERDMDGETVTEYVYDAHRFDYELPPEVQPGIEAIEFYLEAAQAAILQLAQDLEAQEAGFQ*
Draft_00402393	3300000032	Hydrocarbon Resource Environments	MKEHSHISLGWYTLGVIQKAGSKWVIKDLLVRWNEQTEERDMDGGETVTEYVYDAHRFDYELPPEVQPGIEAVEFYLEAAQAAVLQLAQDLEAQEAGFA*
Draft_00539854	3300000032	Hydrocarbon Resource Environments	MKEHSHISLGWYTLGVIKKAGSKWIIEGLLVXWNXQXEERDMDGGETVTEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQAAVLQLAQDLSAQEAGFQ*
Draft_00843001	3300000032	Hydrocarbon Resource Environments	MKERSNIQQPWHGVVNIERDGARYIIRGLMVRWNEQTEEKETEDGTEIEYVYDAHRFDYELPPEISPGNEAVEFYLEAAQAAIIQLAQDLEAQEAGFQ*
Draft_04209021	3300000032	Hydrocarbon Resource Environments	MKERSNIQQPWHGVVNIERDGSRYVVRGLMIRWNEQTEEKEIEDVTETEYVYDAHRFDYELPPEVQPGLEAVEFYLEAAQAAILQLAQDLEAQEAGFQ*
Draft_04685342	3300000032	Hydrocarbon Resource Environments	MKERSNIQQPWHGVVNIERDGSRYIIRDLMVRWNETTEERETDEGTETEYVYDAHRFDYELPPEVQPGLEAVEFYLEAAQVAVLQLAQDLAAQEAGFQ*
Draft_05274882	3300000032	Hydrocarbon Resource Environments	MKEHSHLQLGWYTLGVIKKVGSKWIVKDLLVRWNEQTEERDMDGGETVTEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLEAQEAGFQ*
Draft_100303262	3300000558	Hydrocarbon Resource Environments	MVVIKMKEHSHLQLGWYTFGVIQKEGSKWIVKDLLVRWNEQTEERDMDGGETVTEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQAAVLQLAQDLSAQEAGFQ*
Draft_100768282	3300000558	Hydrocarbon Resource Environments	MKERSNIQQPWHGVVNIERDGARYIIRGLMVRWNEQTEERETDEGTETEYVYDSRRIDVELPPEVQPGIEAVEFYLEAAQAAVLQMAQDLAAQEAGFQ*
Draft_101187692	3300000558	Hydrocarbon Resource Environments	MKERSNIRQPWHGVVNIERDGSRYVVRDLMVRWNEQTEEKETEDGAETEYVYDAHRFDYELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLAAQEAGFQ*
Draft_101826772	3300000558	Hydrocarbon Resource Environments	MKERSNMQQPWHGVVNIECNGTRYVIRNILVRWNETIEDREVEEGTETEYVYDAHRFDYELPVEVQPGLEAVEFYLEAAKDAVLQLAQDLAAQEAGFT*
Draft_102575461	3300000558	Hydrocarbon Resource Environments	MEERSNISKNWYELGTIEKSGSRWIIRDLMIRWNERAEEKEMEDGPGTEYIYDTHRFDYELPVEIQPGTEAVEYYLEAAQDVVLKLAQDLATQEAGFQ*
Draft_115221792	3300000558	Hydrocarbon Resource Environments	MEERSNIQQPWHGVVNVECDGSRYVIRNILVRWNETIEEKEADEGTETEYVYDAHRFDYELPVEISPGVEAVEFYLEAAKDAVLQLAQDLATQEAGFQ*
Draft_117099752	3300000558	Hydrocarbon Resource Environments	MEERSNSSKNWYELGTIEKSGSRWVIKDLLIRWNERTEEKETEDGPIVEYIYDAHRLDYELPVEISPGPEAVELYLETTKDAIVLYAQKLAEQEAGFQ*
Draft_100941616	3300001605	Hydrocarbon Resource Environments	MKEHSHLQLGWYTLGVIKKAGSKWIIEGLLVRWNEQIEERDMDGETVTEYVYDAHRFDYELPVEIQPGTEAVEYYLEAAQDVVLKLAQDLATQEAGFA*
Draft_107072681	3300001605	Hydrocarbon Resource Environments	MKEHSHISLGWYTLGVIKKAGSKWIIEGLLVRWNEQXEERDMDGGETVTEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQAAVLQLAQDLSAQEAGFQ*
MLSBCLC_100096043	3300002220	Hydrocarbon Resource Environments	KMKERSNIQPPWHGVVNIERDGSRYIIRDLMVRWNEQTEEKETEDGTEIEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAKDAVLQLAQDLAAQEAGFT*
MLSBCLC_100096051	3300002220	Hydrocarbon Resource Environments	KMKERSNIRQPWHGVVNIERDGSRYVVRDLMVRWNEQTEEKETEDGAETEYVYDAHRFDYELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLAAQEAGFQ*
MLSBCLC_100096331	3300002220	Hydrocarbon Resource Environments	SNIQQPWHGVVNIERDGARYIIRGLMVRWNEQTEEKETEDGTEIEYVYDAHRFDYELPPEISPGNEAVEFYLEAAQAAIIQLAQDLEAQEAGFQ*
MLSBCLC_100533194	3300002220	Hydrocarbon Resource Environments	GWYTLGVIKKAGSKWIIEGLLVRWNEQIEERDMDGETVTEYVYDAHRFDYELPVEIQPGTEAVEYYLEAAQDVVLKLAQDLATQEAGFA*
MLSBCLC_1011521211	3300002220	Hydrocarbon Resource Environments	SNIQQPWHGVVNVECDGSRYVIRNILVRWNETIEEKEADEGTETEYVYDAHRFDYELPVEISPGVEAVEFYLEAAKDAVLQLAQDLATQEAGFQ*
NAPDCCLC_100220811	3300002446	Hydrocarbon Resource Environments	LVMMMKERSNIQQPWHGVVNIERDGSRYVVRGLMIRWNEQTEEKEIEDVTETEYVYDAHRFDYELPPEVQPGLEAVEFYLEAAQAAILQLAQDLEAQEAGFQ*
NAPDCCLC_100710843	3300002446	Hydrocarbon Resource Environments	QPWHGVVNVECDGSRYVIRNILVRWNETIEEKEADEGTETEYVYDAHRFDYELPVEISPGVEAVEFYLEAAKDAVLQLAQDLATQEAGFQ*
draft_13615122	3300002596	Hydrocarbon Resource Environments	MEERSNSSKNWYALGTIEKSGSRWIVKDLLVRWNERTEEKETEDGPIVEYIYDAHRLDYDIPAEVQLGVEAVEYYLEAAQSAVLQ
draft_109967332	3300002703	Hydrocarbon Resource Environments	MKEHSHLQLGWYTLGAIKKSGSKWIIEELLVRWNEQIEERDMDGETITEYVYDAHRFDYELPPKVQPGLEAVEFYLEEVKEAILQEAMDMAGQEAGFE*
draft_110384682	3300002703	Hydrocarbon Resource Environments	MKEHSHISLGWYTLGVIKKAGSKWIIEGLLVRWNEQIEERDMDGGETVTEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQAAVLQLAQDLSAQEAGFQ*
Iso3TCLC_1000469421	3300002821	Hydrocarbon Resource Environments	MKERSNIRQPWHGVVNIERDGSRYVVRDLMVRWNEQTEEKETEDGAETEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQAAVLQLAQDLEAQEAGFQ*
Ga0101790_14473719	3300006840	Anaerobic Reactor	MKERSNIQQPWHGVVNIERDGSRYVVRDLLVRWNEQTEEKETEDGTEIEYVYDAHRFDYELPPEVQPRLEAVEFYLEAAQAAVLQLAQDLEAQEAGFQ*
Ga0116234_10336243	3300009542	Anaerobic Biogas Reactor	MKEHSHLQLGWYTLGVIQKEGSKWIVKDLLVRWNEQTEERDMDGETVTEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLAAQEAGFQ*
Ga0116234_10470913	3300009542	Anaerobic Biogas Reactor	MKERSNIQQPWHGVVNIERDGSRYVVRDLLVRWNEQTEEKETEDGTETEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQTAVLQLAQDLEAQEAGFQ*
Ga0116234_11185101	3300009542	Anaerobic Biogas Reactor	YTLGVIQKAGSKWIVKDLLVRWNEQTEERDMDGGETVTEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQAAVLQLAQDLAAQEAGFQ*
Ga0123331_11184991	3300009642	Anaerobic Biogas Reactor	MEVKMKEHSHLQLGWYTLGVIQKEGSKWIVKDLLVRWNEQTEERDMDGGETVTEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLEAQEAGFQ*
Ga0123326_10075062	3300009647	Anaerobic Biogas Reactor	MEVKMKEHSHLQLGWRTLGTIEKSGSEWVLKDLLVRWNEQIEERDMDGGETVAEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAILQLAQDLEAQEAGFQ*
Ga0116182_10184944	3300009666	Anaerobic Digestor Sludge	MKERSNIQQPWHGVVNIERDGSRYVVRDLLVRWNEQTEEKETEDGTEIEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLAAQEAGIQ*
Ga0116182_11433962	3300009666	Anaerobic Digestor Sludge	MKEHSHLQLGWYTLGVIKKSGSKWIVKDLLVRWNEQIEERDMDGGETVTEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQAAILQLAQDLEAQEAGFQ*
Ga0116182_11575512	3300009666	Anaerobic Digestor Sludge	MKERSNIQQPWHGVVNIERDGSRYIIRDLMVRWNEQTEEKETEDGTETEYVYDAHRFDYELPPEIGPGNEAVEFYLEAAQAAIIQLAQDLEAQEAGFQ*
Ga0116182_12064921	3300009666	Anaerobic Digestor Sludge	MGVKMKEHSHLQLGWYTLGVIQKEGSKWIVKDLLVRWNEQTEERDMDGETVTEYVYDAHRFDYELPPEVPPGLEAVEFYLEAAQAAVLQLAQDLAAQEAGIQ*
Ga0116148_13067153	3300009669	Anaerobic Digestor Sludge	MKEHSHLQLGWYTLGVIKKSGSKRIIEGLLVRWNEQIEERDMDGETITEYVYDAHRFDYELPPEVQPSLEAVEFYLEAAQAAVLQLAQDLAAQEAGFQ*
Ga0116183_11249722	3300009670	Anaerobic Digestor Sludge	MKEHSHLQLGWYTLGVIKKSGSKWIVKDLLVRWNEQIEERDMDGGETVAEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLEAQEAGFQ*
Ga0116185_14921561	3300009673	Anaerobic Digestor Sludge	MKERSNTQLPWHGICQIEQDGTRWVIRDLLVRWGETTEQRETEEGTETEYVYDAHRINVDLPPEVQPGIEAVELYLEAAKAAILQLAQDLEAQEAGFA*
Ga0116173_12739882	3300009674	Anaerobic Digestor Sludge	MEVKMKEHSHLQLGWYTLGVIQKEGSKWIVKDLLVRWNEQIEERDMDGETVTEYVYDAHRFDFELPPEVPPGLEAVEFYLEAAQAAILQLAQDLEAQEAGFQ*
Ga0116173_14076342	3300009674	Anaerobic Digestor Sludge	MKERSNIQQPWHGVVNIERDGSRYVVRDLLVRWNEQIEERDMDGETVTEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQMAQDLAVQEAGF*
Ga0116149_11337574	3300009675	Anaerobic Digestor Sludge	MEVKMKEHSHLQLGWRTLGTIEKSGSKWVLKDLLVRWNEQIEERDMDGETVAEYVYDAHRFDYELPPEVQPSLEAVEFYLEAAQAAVLQLAQDLSAQEAGFQ*
Ga0116174_101114062	3300009681	Anaerobic Digestor Sludge	MMKERSNIQQPWHGICQIEKDGTRWVIRDLLVRWNEAAEQRETEDGTETEYIYDAHRIDVELPPEVQPGIEAVEFYLEAAQAAILQLAQDLEAQDLEAQEAGFQ*
Ga0116174_102370822	3300009681	Anaerobic Digestor Sludge	MKERSNIQQPWHGVVNIERDGSRYVVRDLLVRWNEQTEEKETEDGTEIEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLEAQ
Ga0116174_105758941	3300009681	Anaerobic Digestor Sludge	IERDGSRYVVRDLLVRWNEQIEERDMDGETVTEYVYDAHRFDYELPPEVQPGIEAVEFYLEAAQAAVLQLAQDLAAQEAGFQ*
Ga0116172_102767132	3300009682	Anaerobic Digestor Sludge	MEERSNIQQPWHGVVNIERDGSRYVVRDLLVRWNEQIEERDMDGETVTEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAILQLAQDLEAQEAGFQ*
Ga0123332_12982582	3300009770	Anaerobic Biogas Reactor	MKERSNIQQPWHGVVNIERDGSRYVVRDLLVRWNEQTEEKETEDGTETEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQTAVLQLAQDLEAQGAGFQ*
Ga0116235_10810061	3300010310	Anaerobic Biogas Reactor	VIQKEGSKWIVKDLLVRWNEQTEERDMDGETVTEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLAAQEAGFQ*
Ga0116239_101195542	3300010346	Anaerobic Digestor Sludge	MKEHSHLQLGWYTLGVIQKEGSKWIVKDLLVRWNEQTEERDMDGGETVAEYVYDAHRFDFELPPEAQPGLEAVEFYLEAAQAAILQLAQDLEAQEAGFQ*
Ga0116239_106034913	3300010346	Anaerobic Digestor Sludge	MEERSNSSKNWYELGTIEKSGSRWVLKDLLVRWNEQIEERDMDGSETVAEYVYDAHRFDYELPPEVQPSLEAVEFYLEAAQAAVLQLAQDLAAQE
Ga0116248_103727733	3300010351	Anaerobic Digestor Sludge	SHLQLGWYTLGVIKKVGSKWIVKDLLVRWNEQTEERDMDGETVTEYVYDAHRFDYELPPEISPGNEAVEFYLEAAQAAIIQLAQDLEAQEAGFQ*
Ga0116251_101370772	3300010365	Anaerobic Digestor Sludge	MKEHSHLQLGWYTLGVIKKSGSKWIVKDLLVRWNEQIEERDMDGGETVAEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQAAILQLAQDLEAQ
Ga0172378_103429312	3300014203	Groundwater	MEVKMKEHSHLQLGWYTLGVIKKAGSKWIVKDLLVRWNEQTEERDMDGSETVTEYVYDAHRFDYELPPEISPGNEAVEFYLEAAQAAIIHLAQDLEAQEAGFQ*
Ga0172378_112063922	3300014203	Groundwater	MMMKERSNIQQPWHGVVNIERDGSRYIIRDLMVRWNEQTEEKETEDGTEIEYVYDAHRFDFELPPEISPGNEAVEFYLEAAQAAIIQLAQDLEAQEAGFQ*
Ga0172381_100786453	3300014204	Landfill Leachate	MEERSNISKNWYELGTIEKSGSRWVIKDLLVRWSERTEEKETEDGPIIEYIYDAHRFDFELPPEVQPGLGAVEYYLTEAKDAVVLLAQNLLAQEEGFHES*
Ga0172381_100927282	3300014204	Landfill Leachate	MKERSNIQQPWHGVVNIERDGSRYIIRDLMVRWNEQTEEKETEDGTELEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLAAQETGFQ*
Ga0172381_101098893	3300014204	Landfill Leachate	MTSLPLRLGRFPLARSSSENENGEQKMGGMMMKERSNTQLPWHGICQIEQGGTRWVIRNLLVRWNETIEEKETDDGTEMEYVYEAHRIDVELPPEIQPGLEAVELYLEAAQAAILQLAQDLE
Ga0172381_102724551	3300014204	Landfill Leachate	VIKKAGSKWIIEGLLVRWNEQIEERDMDGEIVTEYVYDAHRFDYELPPEVQPGLEAVEFYLEAAKDAVLQLAQDLAAQEAGFA*
Ga0172381_103580583	3300014204	Landfill Leachate	MEVTMKEHSHLQLGWYTLGVIQKAGSKWVLKDLLVRWNEQIEERDMDGETVTEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAILQLAQDLEAQEAGFQ*
Ga0172381_105184764	3300014204	Landfill Leachate	SHLQLGWYTLGVIQKEGSKWIVKDLLVRWNEQTEERDMDGETITEYVYDAHRFDYELPPKVQPGLEAVEFYLEEVKEAILQEAMDMAGQEAGFE*
Ga0172381_105759192	3300014204	Landfill Leachate	MKEHSHLQLGWFTLGVIQKEGSKWVIKDLLVRWDEQTEERDMDGETVTEYVYDAHRFDYELPPEVQPGLEAVEFYLEAAQAAILQLAQDLEAQEAGFQ*
Ga0172381_106100183	3300014204	Landfill Leachate	MEVKMKEHSHLQLGWYTLGVIKKTGSKWIIEGLLVRWNEQIEERDMDGETVTEHVYDAHRFDYELPPEVQPGIAAVEYYLDAAQDAVVILAQNLLAQEEGFHESE*
Ga0172381_108211872	3300014204	Landfill Leachate	MEVKMKEHSHLQLGWFTLGVIQKEGSKWVIKDLLVRWDEQTEKRDMDGETVTEYVYDAHRFDYELPPEISPGNEAVEFYLEAAQAAIIQLAQDLEAQEAGFA*
Ga0172381_109351452	3300014204	Landfill Leachate	MEERSNSSKNWYELGTIEKSGSRWVLKDLLVRWNEQTEEKETEDGPIVEYIYDAHRFDYELPPEVQPGIEAVEYYLEAAQSAVLQLAQDLSAQEAGFDGSN*
Ga0172381_110501272	3300014204	Landfill Leachate	MMMKERSNIQQPWHGVVNIERDGSRYVVRGLMVRWNEQTEEKETEDGTETEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQVAVLQLAQDLAAREAGFQ*
Ga0172381_110663882	3300014204	Landfill Leachate	MGVKMKEHSHLQLGWYTLGVIQKEGSKWIIKDLLVRWNEQTEERDMDGETVTEYVYDAHRFDFELPPEAQPGIEAVEFYLEAAQAAVLQLAQDLSAQEAGFQ*
Ga0172381_111973232	3300014204	Landfill Leachate	MKERSNIQQPWHGVVNIERDGSRYVVRGLMVRWNETIEEKEADEGTETEYVYDAHRFDYELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLEAQGAGFQ*
Ga0172381_112448981	3300014204	Landfill Leachate	MKEHSHISLGWYTLGVIQKEGSKWIIKDLLVRWNEHTEELEDMDGGETTVEYVYDAHRFDYELPPKVQPGSEAVEFYLEAAQDAVLQLAQDLAAQEAGFL*
Ga0172381_112836151	3300014204	Landfill Leachate	PWHGVVNIERDGSRYVVRDLLVRWNEQTEEKETEDGTETEYVYDAHRFDYELPPEVQPGLEAFEFYLEAAQAAVLQLAQDLEAQEAGFQ*
Ga0172380_100757812	3300014205	Landfill Leachate	MKERSNIQQPWHGVVNIERDGSRYIIRDLMVRWNEQTEERDRDGGETVAEYVYDAHRFDFELPPEVQPGLEAAEFYLEAAQAAVLQLAQDLEAQGAGFQ*
Ga0172380_101290162	3300014205	Landfill Leachate	MMMKERSNIQQPWHGVVNIERDGSRYIIRDLMVRWNEQTEERETDEGTETEYVYDSRRIDVELPPEVQPGIEAVEFYLEAAQAAVLQMAQDLAAQEAGFQ*
Ga0172380_102805472	3300014205	Landfill Leachate	MKEHSHLQLGWRTLGTIEKSGSKWIVKDLLVRWNEQTEERDMDGGETVAEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLEAQEAGFQ*
Ga0172380_104058722	3300014205	Landfill Leachate	MKERSNIQQPWHGVVNIERDGSRYVVRGLMVRWNEQTEEKETEDGTETEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQA
Ga0172380_106073341	3300014205	Landfill Leachate	MEERSNISKNWYELGTIEKSGSRWVIKDLLVRWSERTEERDMDGETVTEYVYDAHRFDYELPPEISPGNEAVEFYLEAAQAAIIQLAQDLEAQEAGFA*
Ga0172380_106178623	3300014205	Landfill Leachate	LGVIKKSGSKWIIEELLVRWNEQIEERDMDGETVTEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLKLAQDLEAQEAGFQ*
Ga0172380_109233551	3300014205	Landfill Leachate	MKERSNIQQPWHGVVNIERDGSRYVVRDLLVRWNEQTEEKETEDGTEIEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAILQLAQDLEAQEAGFQ*
Ga0172380_109466582	3300014205	Landfill Leachate	MKEHSHLQLGWYTLGVIQKEGSKWIVKDLLVRWNEQIEERDMDGGETVTEYVYDAHRFDYELPPEVQPGLEAVEFYLEAAQAAILQLAQDLEAQEAGFQ*
Ga0172377_103453932	3300014206	Landfill Leachate	MMMEERSNIQQPWHGVVNIERDGSRYIIRDLMVRWNEQTEEKEIEDGTEIEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLA
Ga0172377_106998492	3300014206	Landfill Leachate	MKEHSHISLGWYTLGVIQKEGSKWIVKDLLVRWNEQTEERDMDGGETVAEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAILQLAQDLEAQEAGFQ*
Ga0172377_107906232	3300014206	Landfill Leachate	MKERSNIQQPWHGVVNIERDGSRYVVRGLMVRWNEQTEEKETEDGTETEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLA
Ga0172377_111051631	3300014206	Landfill Leachate	MKEHSHLQLGWFTLGVIQKEGSKWVIKDLLVRWDEQTEERDMDGGETVTEYVYDAHRFDFELPPEVQPGIEAVEYYLEAAQAAVLQLAQDLEAQEAGFE*
Ga0172377_112420791	3300014206	Landfill Leachate	MKERSNIQQPWHGVVNIERDGSRYVIRNLLVRWNETTEEHETESGTETEYIYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAILQLAQDLEAQGTGFQ
Ga0172382_109401131	3300015214	Landfill Leachate	SFMKERSNIQQPWHGVVNIERDGSRYVVRDLLVRWNEQTEEKETEDGTEIEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLEAQEAGFQ*
Ga0180030_11477857	3300019239	Anaerobic Biogas Reactor	MKERSNIQQPWHGVVNIERDGSRYVVRDLLVRWNEQTEEKETEDGTETEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQTAVLQLAQDLEAQEAGFQ
Ga0180030_11949595	3300019239	Anaerobic Biogas Reactor	MKEHSHLQLGWYTLGVIQKEGSKWIVKDLLVRWNEQTEERDMDGETVTEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLAAQEAGFQ
Ga0180031_10052953	3300020072	Anaerobic Biogas Reactor	MKERSNIQQPWHGVVNIERDGSRYVVRDLLVRWNEQTEEKETEDGTETEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQTAVLQLAQDLEAQEA
Ga0208195_11330822	3300025713	Anaerobic Digestor Sludge	MKERSNIQQPWHGVVNIERDGSRYVVRDLLVRWNEQTEEKETEDGTEIEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLAAQEAGIQ
Ga0208195_11944882	3300025713	Anaerobic Digestor Sludge	MKEHSHLQLGWYTLGVIKKSGSKWIVKDLLVRWNEQIEERDMDGGETVAEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQAAVLQLAQDLEAQEAGFQ
Ga0208694_10255795	3300025737	Anaerobic Digestor Sludge	MKERSNIQQPWHGVVNIERDGSRYIIRDLMVRWNEQTEEKETEDGTETEYVYDAHRFDYELPPEIGPGNEAVEFYLEAAQAAIIQLAQDLEAQEAGFQ
Ga0208694_10488645	3300025737	Anaerobic Digestor Sludge	MKEHSHLQLGWYTLGVIKKSGSKWIVKDLLVRWNEQIEERDMDGGETVAEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQAAILQLAQDLEAQEAGFQ
Ga0208459_11557753	3300025748	Anaerobic Digestor Sludge	RLPLAQSSSEVFMMKERSNIQQPWHGICQIEKDGTRWVIRDLLVRWNEAAEQRETEDGTETEYIYDAHRIDVELPPEVQPGIEAVEFYLEAAQAAILQLAQDLEAQDLEAQEAGFQ
Ga0209509_10080363	3300026194	Anaerobic Biogas Reactor	MKEHSHLQLGWRTLGTIEKSGSEWVLKDLLVRWNEQIEERDMDGGETVAEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAILQLAQDLEAQEAGFQ
(restricted) Ga0255343_100549414	3300028561	Wastewater	MMIERSNIQQLWHGPVNIERDGSRYIIRDLMVRWNEQTEEKETEDGTETEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAILQLAQDLEAQEARFQ
(restricted) Ga0255344_100235820	3300028564	Wastewater	MIERSNIQQLWHGPVNIERDGSRYIIRDLMVRWNEQTEEKETEDGTETEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAILQLAQDLEAQEARFQ
Ga0265295_10202364	3300028601	Landfill Leachate	MKEHSHLQLGWYTLGVIQKEGSKWIVKDLLVRWNEQTEERDMDGGETVAEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAILQLAQDLEAQEAGFQ
Ga0265295_10818163	3300028601	Landfill Leachate	MKERSNIQQPWHGVVNIERDGSRYVVRDLLVRWNEQTEEKETEDGTETEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQMAQDLAAQEAGFV
Ga0265295_11025412	3300028601	Landfill Leachate	MMKERSNIQQPWHGVVNIERDGARYVVRGLMVRWNEQTEEKETEDGTETEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAILQLAQDLAAQEAGFQ
Ga0265294_100388147	3300028602	Groundwater	MKERSNIQQPWHGVVNIERDGSRYVVRGLMVRWNETIEEKEADEGTEAEYVYDAHRFDYELPPEVQPGVEAVEFYLEAAQAAVLQLAQDLAAQEAGFQ
Ga0265294_100464845	3300028602	Groundwater	MKEHSHLQLGWRTLGTIEKSGSEWVLKDLLVRWNEQIEERDMDGETVTEYVYDAHRFDYELPPEVQPGIEAIEFYLEAAQAAILQLAQDLEAQEAGFQ
Ga0265294_100620213	3300028602	Groundwater	MKERSNIQQPWHGVVNIERDGSRYIIRDLMVRWNEQTEEKETEDGTELEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLAAQEAGFQ
Ga0265294_100968413	3300028602	Groundwater	MMMKERSNIQQPWHGVVNIERDGSRYVVRGLMVRWNEQTEEKETEDGTETEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQVAVLQLAQDLAAREAGFQ
Ga0265294_101351762	3300028602	Groundwater	MKEHSHLQLGWYTLGVIQKEGSKWIVKDLLVRWNEQTEERDMDGGETVAEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLEAQEAGFQ
Ga0265294_102319111	3300028602	Groundwater	MKERSNIQQPWHGVVNIESDGSRYIIRDLLIRWNEQTEEKETEDGTETEYVYDAHRFDFGLPPEVQPGLEAVEFYLEAAQAAVLQLAQDLEAQEAGFQ
Ga0265294_104865601	3300028602	Groundwater	LGWYTLGVIKKTGSKWIIEGLLVRWNEQIEERDMDGETVTEYVYDAHRFDYELPPEVQPGIAAVEYYLDAAQDAVVILAQNLLAQEGGFHESE
Ga0265294_105418681	3300028602	Groundwater	MMEERSNIQQPWHGVVNIERDGSRYIIRDLMVRWNEQTEEKETEDGTEIEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLEAQEAGFQ
Ga0265297_102432213	3300029288	Landfill Leachate	MKERSNIQQPWHGVVNIERDGSRYVVRDLMVRWNEQTEEKETEDGTEIEYVYDAYRFDFELPPEVQPGLEVVEFYLEAAQAAVLQLAQDLEAQEAGFQ
Ga0265297_103548141	3300029288	Landfill Leachate	MKERSNIQQPWHGVVNIERDGSRYVVRDLMVRWNEQTEEKETEDGTEIEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAILQLAQDL
Ga0265297_107421132	3300029288	Landfill Leachate	MKEHSHLQLGWYTLGVIQKEGSKWIVKDLLVRWNEQTEERDMDGGETVTEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAILQLAQDLEAQEAGFQ
Ga0134835_10292581	3300029825	Fermentation Pit Mud	MKERSNTQLPWHGICQIEKYGTRWVIRDLLVRWNEAAEQRETEEGTETEYVYDAHRIDVDLPPEVQPGIEAVELYLEAAQAAILQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters