Metagenome Family F083871

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083871
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	91 residues
Representative Sequence	MGRAHRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLLVLLAYSNLSGWTINQLVDDNVDL
Number of Associated Samples	96
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.56 %
% of genes near scaffold ends (potentially truncated)	26.79 %
% of genes from short scaffolds (< 2000 bps)	88.39 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (15.179 % of family members)
Environment Ontology (ENVO)	Unclassified (36.607 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.357 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.44% β-sheet: 0.00% Coil/Unstructured: 47.56%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF12844	HTH_19	29.46
PF04439	Adenyl_transf	6.25
PF08241	Methyltransf_11	4.46
PF00484	Pro_CA	3.57
PF12950	TaqI_C	2.68
PF03767	Acid_phosphat_B	1.79
PF00226	DnaJ	1.79
PF03358	FMN_red	0.89
PF12681	Glyoxalase_2	0.89
PF07676	PD40	0.89
PF13673	Acetyltransf_10	0.89
PF01435	Peptidase_M48	0.89
PF03544	TonB_C	0.89
PF03534	SpvB	0.89
PF00903	Glyoxalase	0.89
PF04055	Radical_SAM	0.89
PF08281	Sigma70_r4_2	0.89
PF01520	Amidase_3	0.89
PF13847	Methyltransf_31	0.89
PF00196	GerE	0.89
PF11008	DUF2846	0.89
PF00072	Response_reg	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	3.57
COG2503	Predicted secreted acid phosphatase	General function prediction only [R]	1.79
COG3700	Acid phosphatase, class B	Inorganic ion transport and metabolism [P]	1.79
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.89
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.82 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	8.04 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4.46 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.46 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.68 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.68 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.46 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	3.57 %
Candidatus Aerophobetes	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes	2.68 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.89 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.89 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	3.57 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.68 %
unclassified Aerophobetes	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → unclassified Aerophobetes	2.68 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.68 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %
Thermoanaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales	0.89 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.89 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.89 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	3.57 %
Aerophobetes bacterium SCGC AAA255-F10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → unclassified Aerophobetes → Aerophobetes bacterium SCGC AAA255-F10	2.68 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.68 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	1.79 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.89 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.89 %
Dictyobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Dictyobacteraceae	0.89 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.89 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	0.89 %
Thermoanaerobacterales Family III. Incertae Sedis	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis	0.89 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
unclassified Anaerolineaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae	3.57 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.68 %
Aerophobetes bacterium SCGC AAA255-F10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → unclassified Aerophobetes → Aerophobetes bacterium SCGC AAA255-F10	2.68 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	1.79 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.89 %
Dictyobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Dictyobacteraceae → Dictyobacter	0.89 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.89 %
Xanthomonas vasicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas vasicola	0.89 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.89 %
Thermoanaerobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis → Thermoanaerobacterium	0.89 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Anaerolineaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	3.57 %
Aerophobetes bacterium SCGC AAA255-F10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → unclassified Aerophobetes → Aerophobetes bacterium SCGC AAA255-F10	2.68 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	1.79 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	1.79 %
unclassified Kribbella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella	0.89 %
Dictyobacter formicarum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Dictyobacteraceae → Dictyobacter → Dictyobacter formicarum	0.89 %
Streptomyces aurantiacus group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aurantiacus group	0.89 %
Thermoanaerobacterium saccharolyticum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis → Thermoanaerobacterium → Thermoanaerobacterium saccharolyticum	0.89 %
Cellulomonas fimi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → Cellulomonas fimi	0.89 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.89 %
Xanthomonas vasicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas vasicola	0.89 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Anaerolineaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	3.57 %
Aerophobetes bacterium SCGC AAA255-F10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → unclassified Aerophobetes → Aerophobetes bacterium SCGC AAA255-F10	2.68 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	1.79 %
Streptomyces sp. Amel2xC10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Amel2xC10	0.89 %
Kribbella sp. VKM Ac-2572	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2572	0.89 %
Streptomyces griseoaurantiacus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aurantiacus group → Streptomyces griseoaurantiacus	0.89 %
Streptomyces sp. C	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. C	0.89 %
Dictyobacter formicarum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Dictyobacteraceae → Dictyobacter → Dictyobacter formicarum	0.89 %
Thermoanaerobacterium saccharolyticum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis → Thermoanaerobacterium → Thermoanaerobacterium saccharolyticum	0.89 %
Cellulomonas fimi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → Cellulomonas fimi	0.89 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.89 %
Xanthomonas vasicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas vasicola	0.89 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908025\|MBSR2a_Contig_7756	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2367736	Not Available	894	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2368555	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300000787\|JGI11643J11755_11605990	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300000891\|JGI10214J12806_11861556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas vasicola	678	Open in IMG/M
3300000956\|JGI10216J12902_117292727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. C	992	Open in IMG/M
3300003324\|soilH2_10122278	All Organisms → cellular organisms → Bacteria	2346	Open in IMG/M
3300004157\|Ga0062590_100993406	Not Available	797	Open in IMG/M
3300004480\|Ga0062592_102347395	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → unclassified Aerophobetes → Aerophobetes bacterium SCGC AAA255-F10	534	Open in IMG/M
3300004643\|Ga0062591_102243632	Not Available	569	Open in IMG/M
3300005178\|Ga0066688_10623636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → Cellulomonas fimi	692	Open in IMG/M
3300005184\|Ga0066671_10188071	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300005280\|Ga0065696_1320148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Amel2xC10	532	Open in IMG/M
3300005288\|Ga0065714_10064444	All Organisms → cellular organisms → Bacteria	94227	Open in IMG/M
3300005288\|Ga0065714_10064879	All Organisms → cellular organisms → Bacteria	16178	Open in IMG/M
3300005354\|Ga0070675_100446824	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300005364\|Ga0070673_100150373	All Organisms → cellular organisms → Bacteria	1971	Open in IMG/M
3300005365\|Ga0070688_101693021	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → unclassified Aerophobetes → Aerophobetes bacterium SCGC AAA255-F10	518	Open in IMG/M
3300005441\|Ga0070700_100000056	All Organisms → cellular organisms → Bacteria	83455	Open in IMG/M
3300005451\|Ga0066681_10323664	Not Available	945	Open in IMG/M
3300005471\|Ga0070698_100276509	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300005536\|Ga0070697_100188458	All Organisms → cellular organisms → Bacteria	1750	Open in IMG/M
3300005545\|Ga0070695_100123429	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300005564\|Ga0070664_100706260	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300005617\|Ga0068859_100053747	All Organisms → cellular organisms → Bacteria	4051	Open in IMG/M
3300005618\|Ga0068864_101429896	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300005840\|Ga0068870_11195940	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → unclassified Aerophobetes → Aerophobetes bacterium SCGC AAA255-F10	550	Open in IMG/M
3300005843\|Ga0068860_100820729	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300005844\|Ga0068862_102242545	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005985\|Ga0081539_10272034	Not Available	742	Open in IMG/M
3300006031\|Ga0066651_10499971	Not Available	644	Open in IMG/M
3300006844\|Ga0075428_100457302	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300006845\|Ga0075421_100395050	All Organisms → cellular organisms → Bacteria	1662	Open in IMG/M
3300006846\|Ga0075430_100293289	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300006852\|Ga0075433_10168495	All Organisms → cellular organisms → Bacteria	1949	Open in IMG/M
3300006852\|Ga0075433_11552299	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300006853\|Ga0075420_100684084	All Organisms → cellular organisms → Bacteria → Acidobacteria	884	Open in IMG/M
3300006876\|Ga0079217_10247899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aurantiacus group → Streptomyces griseoaurantiacus	948	Open in IMG/M
3300006954\|Ga0079219_12059251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis → Thermoanaerobacterium → Thermoanaerobacterium saccharolyticum	545	Open in IMG/M
3300007004\|Ga0079218_10583589	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300009093\|Ga0105240_11219631	Not Available	796	Open in IMG/M
3300009094\|Ga0111539_12212568	Not Available	638	Open in IMG/M
3300009100\|Ga0075418_11840867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	658	Open in IMG/M
3300009101\|Ga0105247_10102444	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	1832	Open in IMG/M
3300009101\|Ga0105247_11448327	Not Available	558	Open in IMG/M
3300009147\|Ga0114129_10388080	Not Available	1843	Open in IMG/M
3300009147\|Ga0114129_10445039	All Organisms → cellular organisms → Bacteria	1700	Open in IMG/M
3300009147\|Ga0114129_10922255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Dictyobacteraceae → Dictyobacter → Dictyobacter formicarum	1105	Open in IMG/M
3300009156\|Ga0111538_11280115	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300009156\|Ga0111538_12040702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	721	Open in IMG/M
3300009162\|Ga0075423_10766024	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300009174\|Ga0105241_11317772	Not Available	688	Open in IMG/M
3300009177\|Ga0105248_12050842	Not Available	650	Open in IMG/M
3300009789\|Ga0126307_10000760	All Organisms → cellular organisms → Bacteria → Acidobacteria	21218	Open in IMG/M
3300009840\|Ga0126313_10143155	Not Available	1798	Open in IMG/M
3300010036\|Ga0126305_10082634	All Organisms → cellular organisms → Bacteria	1895	Open in IMG/M
3300010036\|Ga0126305_10891662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300010037\|Ga0126304_10031473	All Organisms → cellular organisms → Bacteria	3121	Open in IMG/M
3300010038\|Ga0126315_10461619	Not Available	806	Open in IMG/M
3300010039\|Ga0126309_10087271	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300010040\|Ga0126308_11164960	Not Available	545	Open in IMG/M
3300010041\|Ga0126312_10306085	Not Available	1122	Open in IMG/M
3300010041\|Ga0126312_10346510	Not Available	1052	Open in IMG/M
3300010042\|Ga0126314_10289206	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	1168	Open in IMG/M
3300010044\|Ga0126310_11871410	Not Available	501	Open in IMG/M
3300010371\|Ga0134125_11272760	Not Available	803	Open in IMG/M
3300010397\|Ga0134124_10241857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1656	Open in IMG/M
3300010397\|Ga0134124_10454741	Not Available	1230	Open in IMG/M
3300010399\|Ga0134127_10149404	All Organisms → cellular organisms → Bacteria → Acidobacteria	2119	Open in IMG/M
3300010400\|Ga0134122_10189076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1701	Open in IMG/M
3300010400\|Ga0134122_12046875	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300011993\|Ga0120182_1024358	Not Available	566	Open in IMG/M
3300012015\|Ga0120187_1014080	Not Available	751	Open in IMG/M
3300012212\|Ga0150985_115037704	Not Available	759	Open in IMG/M
3300012469\|Ga0150984_105842795	Not Available	768	Open in IMG/M
3300013100\|Ga0157373_10979410	Not Available	630	Open in IMG/M
3300013500\|Ga0120195_1003816	Not Available	844	Open in IMG/M
3300014325\|Ga0163163_12237979	Not Available	606	Open in IMG/M
3300014745\|Ga0157377_10106183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2572	1681	Open in IMG/M
3300018432\|Ga0190275_10534931	Not Available	1211	Open in IMG/M
3300018482\|Ga0066669_10096896	All Organisms → cellular organisms → Bacteria	2036	Open in IMG/M
3300019487\|Ga0187893_10421635	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300025900\|Ga0207710_10200253	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300025911\|Ga0207654_10496743	Not Available	861	Open in IMG/M
3300025911\|Ga0207654_11419889	Not Available	506	Open in IMG/M
3300025926\|Ga0207659_10799137	Not Available	810	Open in IMG/M
3300025930\|Ga0207701_11533646	Not Available	538	Open in IMG/M
3300025942\|Ga0207689_10088718	Not Available	2540	Open in IMG/M
3300025945\|Ga0207679_10813072	Not Available	852	Open in IMG/M
3300025945\|Ga0207679_11376019	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300025961\|Ga0207712_11934640	Not Available	528	Open in IMG/M
3300026023\|Ga0207677_11769675	Not Available	573	Open in IMG/M
3300026035\|Ga0207703_10790096	Not Available	906	Open in IMG/M
3300026075\|Ga0207708_10000089	All Organisms → cellular organisms → Bacteria	72013	Open in IMG/M
3300026089\|Ga0207648_11999507	Not Available	541	Open in IMG/M
3300026095\|Ga0207676_11677953	Not Available	634	Open in IMG/M
3300026118\|Ga0207675_101819055	Not Available	628	Open in IMG/M
3300027880\|Ga0209481_10607706	Not Available	567	Open in IMG/M
3300027909\|Ga0209382_10670925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	1119	Open in IMG/M
3300028380\|Ga0268265_11473142	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300030496\|Ga0268240_10158292	Not Available	562	Open in IMG/M
3300030496\|Ga0268240_10166186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	551	Open in IMG/M
3300030499\|Ga0268259_10144298	Not Available	562	Open in IMG/M
3300030499\|Ga0268259_10190829	Not Available	505	Open in IMG/M
3300031548\|Ga0307408_100041621	All Organisms → cellular organisms → Bacteria	3258	Open in IMG/M
3300031548\|Ga0307408_100689020	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300031731\|Ga0307405_10255948	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300031903\|Ga0307407_11512714	Not Available	531	Open in IMG/M
3300031995\|Ga0307409_100425611	Not Available	1275	Open in IMG/M
3300031996\|Ga0308176_12713805	Not Available	527	Open in IMG/M
3300032002\|Ga0307416_101114976	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	54.46%
Environmental	Environmental	45.54%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	54.46%
Terrestrial	Environmental → Terrestrial	45.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	36.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.18%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.79%
Cave	Environmental → Terrestrial → Cave	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	30.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.25%
Loam	Environmental → Terrestrial → Soil → Loam	5.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.57%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.79%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	30.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.79%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.18%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	10.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.04%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.14%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.57%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.79%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Miscanthus Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.89%
Switchgrass Rhizosphere Bulk Soil	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere Bulk Soil	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908025	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample from Bulk Soil Replicate 2: eDNA_1	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005280	Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil	Host-Associated	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011993	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C1.rep1	Environmental	Open in IMG/M
3300012015	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013500	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T4.rep2	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030499	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR2a_00161820	2124908025	Miscanthus Rhizosphere	MGRAHRSRPNRLGEKLRLIRIHFGLTQMALIKRLAVKTEPLYPSSISLFEQGGREPSLLVLLAYSKLARISINDLVDDKVKPSDLSIKPRRFD
ICChiseqgaiiDRAFT_23677361	3300000033	Soil	MGRAHRSRPHQLGKKLQLIRIRLGLTQSELIKRLAVKGEVLYPSSISLFERGGREPSLLVLLAYSNLSGWTINELVDDKVDLSDAKI
ICChiseqgaiiDRAFT_23685552	3300000033	Soil	MGRAHRSRPHQLGKKLQLIRIRLGLTQSELIKRLAVKGEVLYPSSISLFERGGREPSLLVLLAYSNLSGWTINELVDDKVDLSDAKILK*
JGI11643J11755_116059901	3300000787	Soil	MGRAHRSRPHQLGKKLQLIRIRLGLTQSELIKRLAVKGEVLYPSSISLFERGGREPSLLVLLAYSNLSGWTIXELVXDXXDLSDAKILK*
JGI10214J12806_118615561	3300000891	Soil	MGRAHRSRPHQLGKKLQLIRIRLGLTQSELIKRLAVKGEVLYPSSISLFERGGREPSLLVLLAYSNLSGWTINELVDDKMDLSDAKILK*
JGI10216J12902_1172927271	3300000956	Soil	MGRAHRSRPNRLAKKLQLIRIRLGLTQSELIKKLAVKGEVLYPSSISLFEHGGREPSLPVLLAYSNLSGWTINELVDDKVDLSDAKISEGGPRSHRSR*
soilH2_101222783	3300003324	Sugarcane Root And Bulk Soil	MGRAHRSRPHGLGKKLQFIRIRLGLTQSELIKRLAVKDEVLYPSSISLFERGGREPSLRVLLAYSNLSGWTINELVDDKVDLSDAKIRNNKVDRHSPDR*
Ga0062590_1009934061	3300004157	Soil	MGRAHRSRPRHLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPASISLFERDGREPSLPVLLAYSNLSGWSINELVDDKVDLSDAEILKERQLHKRH*
Ga0062592_1023473951	3300004480	Soil	MGRAQRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSNLSGWTINQLVDDKVDL*
Ga0062591_1022436321	3300004643	Soil	MGRAHRSRPRHLGEKLQLIRIRLGLTQSELIKQLAVKDEALYPASISLFERDGREPSLPVLLAYSNLSGWSINELVDDKVDLSDAEILKERQLHKRH*
Ga0066688_106236361	3300005178	Soil	MGRAHRSRPNRLGEKLRLIRIQLGLTQSQLIAVLAVKGEALYPSSISLFEQNEREPSLLVLLAYSNLSGVIINDLVDDKVRPAELSIKQSR*
Ga0066671_101880713	3300005184	Soil	VLQVQPRLFGEGTLMGRAHRSRPNRLGEKLRLIRIQLGLTQSQLIAVLAVKGEALYPSSISLFEQNEREPSLLVLLAYSNLSGVIINDLVDDKVRPAELSIKQSR*
Ga0065696_13201481	3300005280	Switchgrass Rhizosphere Bulk Soil	MGRAHRSRPHRLGKKLQLIRIRLGLTQSELIKKLAVKDEVLYPSSISLFESGGREPSLLVLLAYSKLSGWTINELVDDKVDLSDAKIRNSKVERHSPDH*
Ga0065714_1006444490	3300005288	Miscanthus Rhizosphere	MGRAHRSRPNRLGEKLRLIRIHFGLTQSALINRLAVKGESLYPSSISLFEQGGREPSLLVLLAYSKLAGVTINELVDDQVKLSDLSIKHRH*
Ga0065714_100648793	3300005288	Miscanthus Rhizosphere	MGRAHRSRPNRLGEKLRLIRIHFGLTQMALIKRLAVKTEPLYPSSISLFEQGGREPSLLVLLAYSKLARISINDLVDDKVKPSDLSIKPRRFD*
Ga0070675_1004468242	3300005354	Miscanthus Rhizosphere	MGRAHRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLLVLLAYSNLSGWTINQLVDDNVDL*
Ga0070673_1001503733	3300005364	Switchgrass Rhizosphere	MGRAHRPRPRRLGEKLQLIRIRLGLTQAELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSNLSGWTINQLVDD
Ga0070688_1016930211	3300005365	Switchgrass Rhizosphere	MGRAHRSRPRRLGKKLQLIRIRLGLTQSELIKKLAVKDEVLYPSSISLFESGGREPSLLVLLAYSQLSGWTINELVDDKVDLSDAKIRTRT
Ga0070700_10000005638	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MGRAHRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEILYPSSISLFESGGREPSLPVLLAYSNLSGWTINQLVDDNVDL*
Ga0066681_103236642	3300005451	Soil	MGRAHRSRPNRLGEKLRFIRMHFGLTQSALIERLAVKSEALYPSSISLFEQGGREPSLLVLLAYSKLTGVIINDLVDDKVNLSELRIKPARVED*
Ga0070698_1002765092	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MGRAHRSRPNRLGEKLRFIRIHFGLTQSALIAKLAVKSEALYPSSISLFEQGAREPSLLVLLAYSKLTGVTINDLVDDKVKLSNLRIEPKRARD*
Ga0070697_1001884582	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGRAHRSRPNRLGEKLRFIRIHFGLTQSALIERLAVKSEALYPSSISLFEQGAREPSLLVLLAYSKLASVIINDLVDDKVNLSELSIKPGRVQD*
Ga0070695_1001234292	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MGRAHRSRPNRLGEKLRLIRIHFGLTQSALITRLAVKGESLYPSSISLFEQGGREPSLLVLLAYSKLAGVTINELVDDQVKLSDLSIKHRH*
Ga0070664_1007062601	3300005564	Corn Rhizosphere	MGRAQRPRPRRLGEKLQLIRIRLGLTQAELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSNLSGWTINQLVDDSVDL*
Ga0068859_1000537476	3300005617	Switchgrass Rhizosphere	KLMGRAHRPRPRRLGEKLQLIRIRLGLTQAELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSNLSGWTINQLVDDSVDL*
Ga0068864_1014298961	3300005618	Switchgrass Rhizosphere	MGRAQRPRPRRLGEKLQLIRIRLGLTQAELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSHLSGWTINQLVDDNVDL*
Ga0068870_111959401	3300005840	Miscanthus Rhizosphere	MGRAHRPRPRRLGEKLQLIRIRLGLTQAELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSHLSGWTINQLVDDNVDL*
Ga0068860_1008207291	3300005843	Switchgrass Rhizosphere	MGRAQRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSHLSGWTINQLVDDNVDL*
Ga0068862_1022425452	3300005844	Switchgrass Rhizosphere	RLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSNLSGWTINQLVDDKVDL*
Ga0081539_102720342	3300005985	Tabebuia Heterophylla Rhizosphere	MGRAHRSRPNRLGEKLRLIRIHFGLTQSALINRLAVKGESLYPSSISLFEQGGREPSLLVLLAYSKLAGVTI
Ga0066651_104999712	3300006031	Soil	MGRAHRSRPNRLGEKLRFIRMHFGLTQSALIERLAVKSEALYPSSISLFEQGGREPSLLVLLAYSKLTGVIINDLVDDKVNLSELRIKPGRVED*
Ga0075428_1004573022	3300006844	Populus Rhizosphere	MGRAHRSRPHRLGKKLQLIRIRLGLTQAELIKKLAVKDEVLYPSSISLFERDGREPSLLVLLAYSNLSGWTINELVDDKVDLSDAKILK*
Ga0075421_1003950503	3300006845	Populus Rhizosphere	RPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLLVLLAYSNLSGKTINELVDDNVDL*
Ga0075430_1002932892	3300006846	Populus Rhizosphere	MGRAHRSRPHRLGKKLQLIRIRLGLTQAELIKKLAVKDEVLYPSSISLFERDGREPSLLVLLAYSNLSGWTINELVDDKVDLSDAKILT*
Ga0075433_101684952	3300006852	Populus Rhizosphere	MGRAHRSRPRRLGEKLQLIRIRLGLTQADLIKQLAVKDEILYPSSISLFERGGREPSLLVLLAYSNLSGWTINELVDDKVDLSDKRSSKS*
Ga0075433_115522992	3300006852	Populus Rhizosphere	KLMGRAQRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSNLSGWTINQLVDDKVDL*
Ga0075420_1006840842	3300006853	Populus Rhizosphere	MGRAHRSRPHRLGKKLQLIRIRLGLTQSELIKRLAVKNEVLYPSSISLFERGGREPSLLVLLAYSNLSGWTINELVDDKVDLSDKKVLK*
Ga0079217_102478991	3300006876	Agricultural Soil	MGRAHRSRPNRLGGKLRFIRIHFGLTQSALINKLAVHSEPLYPSSISLFEQGAREPSLLVLLAYSKLAGVTINELVDDKVKLSDLTIKAGRGNLKV*
Ga0075436_1005851012	3300006914	Populus Rhizosphere	RFIRIHFGLTQSALIDKLAVRSEALYPSSISLFEQGAREPSLLVLLAYSKLTGVTINELVDDKVKLSNLRIEPKRARD*
Ga0079219_120592511	3300006954	Agricultural Soil	MGRAHRSRPNRLGEKLRFIRIHFAMTQSALIERLAVKSEALYPSSISLFEQGGREPSLLVLLAYSRLAGVTINELVDDKVDLSDLRSTPGQTVGRA*
Ga0079218_105835891	3300007004	Agricultural Soil	RLGGKLRFIRIHFGLTQSALINKLAVHSEPLYPSSISLFEQGAREPSLLVLLAYSKLAGVTINELVDDKVKLSDLTIKAGRGNLKV*
Ga0105240_112196312	3300009093	Corn Rhizosphere	LQVQPRFIREDKLMGRAHRSRPRHLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPASISLFERDGREPSLPVLLAYSNLSGWSINELVDDKVDLSDAEILKERQLHKRH*
Ga0111539_122125681	3300009094	Populus Rhizosphere	LQVQPRFIPEGKLMGRAQRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSNLSGWTINQLVDDKVD
Ga0075418_118408671	3300009100	Populus Rhizosphere	HRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLLVLLAYSNLSGKTINELVDDNVDL*
Ga0105247_101024441	3300009101	Switchgrass Rhizosphere	LQVQPRFIPEGKLMGRAHRPRPRRLGEKLQLIRIRLGLTQAELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSNLSGWTINQLVDDKVDL*
Ga0105247_114483272	3300009101	Switchgrass Rhizosphere	LQVQPRFIPEDKLMGRAHRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLLVLLAYSNLSGWTINQLVDDNVDL*
Ga0114129_103880802	3300009147	Populus Rhizosphere	VQPRLFREDKLMGRAHRSRPNRLGEKLRFIRIPFGLTQSALIERLAVKSEALYPSSISLFEQGAREPSLLVLLAYSKLTGVTINDLVDDKVNLAELRTRPGRVGD*
Ga0114129_104450392	3300009147	Populus Rhizosphere	LQVQPRFIPEDKLMGRAHRSRPRRLGEKLQLIRIRLGLTQADLIKQLAVKDEILYPSSISLFERGGREPSLLVLLAYSNLSGWTINELVDDKVDLSDKRSSKS*
Ga0114129_109222553	3300009147	Populus Rhizosphere	LQVQPRFISEGKLMGRAHRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLLVLLAYSNLSGKTINELVDDNVDL*
Ga0111538_112801151	3300009156	Populus Rhizosphere	LQVQPRFIPEGKLMGRAQRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSHLSGWTINQLVDDNVDL*
Ga0111538_120407022	3300009156	Populus Rhizosphere	GRAHRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLLVLLAYSNLSGKTINELVDDNVDL*
Ga0075423_107660241	3300009162	Populus Rhizosphere	VQPRLFREDKLMGRAHRSRPNRLGEKLRLIRIHFGLTQSALITRLAVKGESLYPSSISLFEQGGREPSLLVLLAYSKLAGVTINELVDDQVKLSDLSIKHRH*
Ga0105241_113177721	3300009174	Corn Rhizosphere	LQVQPRFIREDKLMGRAHRSRPRHLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPASISLFERDGREPSLPVLLAYSNLSGWTINELVDDKVDLSDTQIPKHRQ*
Ga0105248_120508421	3300009177	Switchgrass Rhizosphere	PRPRRLGEKLQLIRIRLGLTQAELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSNLSGWTINQLVDDSVDL*
Ga0126307_1000076011	3300009789	Serpentine Soil	LQVQPRVIPEGKVMGRAHRSRPHRLGKKLQLIRIRLGLTQSELIKRLAVKNEVLYPSSISLFESDGREPSLPVLLAYSNLSGWTINELVDDKVNLSDAKILKKRPAGIPL*
Ga0126313_101431551	3300009840	Serpentine Soil	VQPRLFREDKLMGRAHRSRPNRLGEKLRLIRIHFGLTQSALIYKLAVKGESLYPSSISLFEQGGREPSLLVLLAYSKLAGVSINELVDDQVKLS
Ga0126305_100826343	3300010036	Serpentine Soil	VQLRLFREDKLMGRAHRSRPNRLGEKLRLIRIHFGLTQSALINKLAVKGESLYPSSISLFEQGGREPSLLVLLAYSKLAGVSINELVDDQVKLSDLSIKHGR*
Ga0126305_108916622	3300010036	Serpentine Soil	PNRLGEKLRLIRIHFGLTQSALITRLAVKGESLYPSSISLFEQGGREPSLLVLLAYSKLAGVTINELVDDQVKLSDLSIKHHGR*
Ga0126304_100314732	3300010037	Serpentine Soil	VQPRLFREDKLMGRAHRSRPNRLGEKLRLIRIHFGLTQSALIARLAVKGESLYPSSISLFEQGGREPSLLVLLAYSKLAGVSINELVDDQVKLSDLSIKHGR*
Ga0126315_104616191	3300010038	Serpentine Soil	LQVQPRFIPEGKLMGRAHRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLLVLLAYSKLSGWTINQLVDDSVDL*
Ga0126309_100872713	3300010039	Serpentine Soil	VQPRLFREDKLMGRAHRSRPNRLGEKLRLIRIHFGLTQSALINKLAVKGESLYPSSISLFEQGGREPSLLVLLAYSKLAGVSINELVDDQVKLSDLSIKHGR*
Ga0126308_111649601	3300010040	Serpentine Soil	MGRAHRSRPNRLGEKLRLIRIHFGLTQSALITRLAVKGESLYPSSISLFEQGGREPSLLVLLAYSKLAGVTINELVDDQVKLSDLSIKHHGR*
Ga0126312_103060851	3300010041	Serpentine Soil	VQPRLFREDKLMGRAHRSRPNRLGEKLRLIRIHFGLTQSALIYKLAVKGESLYPSSISLFEQGGREPSLLVLLAYSKLAGITINDLVDDQVKLSDLSIKTHGR*
Ga0126312_103465101	3300010041	Serpentine Soil	MGRAHRSRPHGLGKKLQLIRIRLGLTQSELIKRLALKDEVLYPSSISLFESGGREPSLLVLLAYSNLSGWTINELVDDKVDLSETKIPVD*
Ga0126314_102892061	3300010042	Serpentine Soil	LQVQPRFIPEGKLMGRAHRPRPRRLGEKLQLIRIRLGLTQSELIKQLGVKDEVLYPSSISLFERDGREPSLLVLLAYSKLSGWTINQLVDDSVDL*
Ga0126310_118714101	3300010044	Serpentine Soil	LGEKLRLIRVHFGLTQSALINRLAVRRETLYPASISLFEQGGREPSLLVLLAYSNLARVTINQLVDDKVRPSDLV
Ga0134125_112727602	3300010371	Terrestrial Soil	AHRSRPHRLGKKLQLIRIRLGLTQSELIERLAVKNEVLYPSSISLFERGGREPSLLVLLAYSNLSGWTINELVDDKVDLSDKKVLK*
Ga0134124_102418573	3300010397	Terrestrial Soil	LQVQPRFIREDKLMGRAHRSRPRRLGEKLQLIRIRLGLTQADLIKQLAVKDEILYPSSISLFERGGREPSLLVLLAYSNLSGWSINELVDDKVDLSDKRSSKKVGDRAR*
Ga0134124_104547412	3300010397	Terrestrial Soil	LQVQPRFIREDKLMGRAHRSRPRHLGEKLQLIRIRLGLTQSELIKQLAVKDEALYPASISLFERDGREPSLPVLLAYSNLSGWSINELVDDKVDLSDAEILKERQLHKRH*
Ga0134127_101494042	3300010399	Terrestrial Soil	LQVQPRFISEDKLMGRAHRSRPRRLGEKLQLIRIRLGLTQPELIKQLGVKDEVLYPSSISLFERDGREPSLPVLLAYSNLSGWTINELVDDKVDLSDTQIPKHRQ*
Ga0134122_101890761	3300010400	Terrestrial Soil	LQVQPRFIPEGKLMGRAHRPRPRRLGEKLQLIRIRLGLTQSELIKQLGVKDEVLYPSSISLFERDGREPSLLVLLAYSKLSGWSINELVDDNVDL*
Ga0134122_120468752	3300010400	Terrestrial Soil	LQVQPRFIPEGKLMGRAHRSRPRRLGEKLQLIRIRLGLTQPELIKQLGVKDEVLYPSSISLFERDGREPSLPVLLAYSNLSGWTINELVDDKVDLSDTQIPKHRQ*
Ga0120182_10243581	3300011993	Terrestrial	LQGQPRFIPEGKLMGRAHRSRPHGLGKKLQLIRTRLGLTQSELIKQLAVKDEVLYPSSISLFEHDGREPSLPVLLAYSNLSGWTINELVDDKVDLSVAKI
Ga0120187_10140801	3300012015	Terrestrial	LQVQPRFIPEGKLMGRVQRSRPHRLGKKLQLIRIRLGLTQSELIKKLAVNGEALYPSSISLFESDGREPSLLVLLAYSNLSGWTINELVDDKVDLSDAKIRKKR*
Ga0150985_1150377041	3300012212	Avena Fatua Rhizosphere	MGRAHRSRPNRLGEKLRLIRIHFGLTQSALINKLAVKGESLYPSSISLFEQGGREPSLLVLLAYSKLAGVSINELVDDQVKLSDLTIKHGR*
Ga0150984_1058427951	3300012469	Avena Fatua Rhizosphere	MGRAHRSRPNRLGEKLRLIRIHFGLTQSALINKLAVKGESLYPSSISLFEQSGREPSLLVLLAYSKLAGVSINELVDDQVKLSDLTIKHHGR*
Ga0157373_109794101	3300013100	Corn Rhizosphere	LQVQPRFIPEGKLMGRAHRPRPRRLGEKLQLIRIRLGLTQAELIKQLAVKDEALYPASISLFERDGREPSLPVLLAYSNLSGWSINEL
Ga0120195_10038161	3300013500	Terrestrial	LQVQPRFIPEGKLMGRAHRSRPHRLGKKLQLIRIRLGLTQSELIKKLAVKDEPLYTSSISLFERGGREPSLLVLLAYSNLSGWTINELVDDKVDLSDAKIRKQR*
Ga0163163_122379791	3300014325	Switchgrass Rhizosphere	LQVQPRFIPEGKLMGRAQRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSNLSGWTINQLVDDSVDL*
Ga0157377_101061832	3300014745	Miscanthus Rhizosphere	MGRAHRSRPNRLGEKLRFIRIHFGLTQSALIAKLAVKSEALYPSSISLFEQGAREPSLLVLLAYSKLTGVTINDLVDDKVKLSNLRI
Ga0190275_105349311	3300018432	Soil	MGRAHRSRPRGLGEKLLLIRVRLGLTQSELIKRLAVKNEALYPSSISLFERGGREPSLLVLLAYSKLSGWTINELVDDKVDLPDAKIPKKR
Ga0066669_100968963	3300018482	Grasslands Soil	MGRAHRSRPNRLGEKLRFIRMHFGLTQSALIERLAVKSEALYPSSISLFEQGGREPSLLVLLAYSKLTGVTINDLVDDKVNLSELRIKPGRVED
Ga0187893_104216352	3300019487	Microbial Mat On Rocks	GKKLQLIRIRLGLTQSELIKRLAVKDEVLYPSSISLFESGGREPSLLALLAYSKLSGWTINELVDDKVDLSDAKIRNNKVDRRDHL
Ga0207710_102002531	3300025900	Switchgrass Rhizosphere	MGRAHRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLLVLLAYSNLSGWTINQLVDDNVDL
Ga0207654_104967432	3300025911	Corn Rhizosphere	MGRAHRSRPRHLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPASISLFERDGREPSLPVLLAYSNLSGWSINELVDDKVDLSDAEILKERQLHKRH
Ga0207654_114198891	3300025911	Corn Rhizosphere	MGRAHRPRPRRLGEKLQLIRIRLGLTQAELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSNLSGWTINQLVDDSVDL
Ga0207659_107991372	3300025926	Miscanthus Rhizosphere	MGRAHRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSHLSGWTINQLVDDNVDL
Ga0207701_115336461	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MGRAHRSRPRRLGKKLQLIRIRLGLTQSELIKKLAVKDEVLYPSSISLFESGGREPSLLVLLAYSQLSGWTINELVDDKVDLSDAKIRTRTGVHQIVD
Ga0207689_100887182	3300025942	Miscanthus Rhizosphere	MGRAHRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPASISLFERDGREPSLPVLLAYSNLSGWSINELVDDKVDLSDAEILKERQLHKRH
Ga0207679_108130721	3300025945	Corn Rhizosphere	MGRAHRPRPRRLGEKLQLIRIRLGLTQSELIKQLGVKDEVLYPSSISLFERDGREPSLLVLLAYSRLSGWTINELVDDSVDL
Ga0207679_113760192	3300025945	Corn Rhizosphere	RAQRPRPRRLGEKLQLIRIRLGLTQAELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSNLSGWTINQLVDDKVDL
Ga0207712_119346401	3300025961	Switchgrass Rhizosphere	MGRAQRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSNLSGWTINQLVDDNVDL
Ga0207677_117696751	3300026023	Miscanthus Rhizosphere	MGRAQRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLIVLLAYSHLSGWTINQLVDDNVDL
Ga0207703_107900962	3300026035	Switchgrass Rhizosphere	MGRAHRSRPRHLGEKLQLIRIRLGLTQSELIKQLAVKDEALYPASISLFERDGREPSLPVLLAYSNLSGWSINELVDDKVDLSDAEILKERQLHKRH
Ga0207708_1000008926	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MGRAHRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEILYPSSISLFESGGREPSLPVLLAYSNLSGWTINQLVDDNVDL
Ga0207648_119995071	3300026089	Miscanthus Rhizosphere	MGRAHRSRPRRLGKKLQLIRIRLGLTQSELIKKLAVKDEVLYPSSISLFETGGREPSLLVLLAYSQLSGWTINELVDDKVDLSDAKIRTRTGVHQIVD
Ga0207676_116779531	3300026095	Switchgrass Rhizosphere	MGRAQRPRPRRLGEKLQLIRIRLGLTQAELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSHLSGWTINQLVDDSVDL
Ga0207675_1018190551	3300026118	Switchgrass Rhizosphere	MGRAHRSRPRHLGEKLQLIRIRLGLTQSGLIKQLAVKDAALYPASISLFERDGREPSLPVLLAYSNLSGWSINELVDDKVDLSDAEILKERQLHKRH
Ga0209481_106077061	3300027880	Populus Rhizosphere	MGRAHRSRPHRLGKKLQLIRIRLGLTQAELIKKLAVKDEVLYPSSISLFERDGREPSLLVLLAYSNLSGWTINELVDDKVDLSDAKILK
Ga0209382_106709251	3300027909	Populus Rhizosphere	MGRAHRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLLVLLAYSNLSGKTINELVDDNVDL
Ga0268265_114731421	3300028380	Switchgrass Rhizosphere	MGRAQRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLMVLLAYSHLSGWTINQLVDDNVDL
Ga0268240_101582921	3300030496	Soil	MGRAHRSRPNRLGEKLRLIRIYFGLTQSALIHKLAVKGESLYPSSISLFEQGGREPSLLVLLAYSKLAGVSIND
Ga0268240_101661862	3300030496	Soil	GEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLLVLLAYSNLSGRTINELVDDSVDL
Ga0268259_101442981	3300030499	Agave	MGRAHRSRPNRLGEKLRLIRIHLGLTQPALIKHLAVKGETLYPASISLFEQGGREPSLLVLLAYSKASGVTINDLVDDKVRPSDLVIKPK
Ga0268259_101908291	3300030499	Agave	MGRAHRSRPHGLGKKLQLIRIRLGLTQSELIKKLAVDEVLYPSSISLFESNGREPSLLVLLAYSNLSGWTMNELVDDKVDLSDSKILKQRL
Ga0307408_1000416213	3300031548	Rhizosphere	MGRAHRSRPHRLGRKLQLIRIRLGLTQSELIKRLAVRDEVLYPSSISLFESGGREPSLLVLLAYSNLSGWTINELVDDKVDLSDAKIRNSKVERHSPDR
Ga0307408_1006890201	3300031548	Rhizosphere	HRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLLVLLAYSNLSGRTINELVDDNVDL
Ga0307405_102559482	3300031731	Rhizosphere	MGRAHRPRPRRLGEKLQLIRIRLGLTQSELIKQLAVKDEVLYPSSISLFERDGREPSLLVLLAYSNLSGRTINELVDDNVDL
Ga0307407_115127141	3300031903	Rhizosphere	MGRAHRSRPHRLGEKLRLIRIHFGLTQSALIDKLAVKGESLYPSSISLFEQGGREPSLLVLLAYSKLAGVTINELVDDQVKLSDLSIKHGR
Ga0307409_1004256112	3300031995	Rhizosphere	MGRAHRSRPHRLGEKLRLIRIHFGLTQSALIDKLAVKGESLYPSSISLFEQGGREPSLLVLLAYSKLAGVTINELVDDQVKLSD
Ga0308176_127138052	3300031996	Soil	MGRAHRSRPNRLGEKLRLIRIHFGLTQSALIERLAVKSEKLYPASVSLFEQGGREPSLLVLLAYSNLAGVTINDLVDDKVTPSELVFVHSRRFK
Ga0307416_1011149761	3300032002	Rhizosphere	PEGKVMGRAHRSRPHRLGRKLQLIRIRLGLTQSELIKRLAVRDEVLYPSSISLFESGGREPSLLVLLAYSNLSGWTINELVDDKVDLSDAKIRNSKVERHSPDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083871

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences