Metagenome / Metatranscriptome Family F083818

Basic Information
Family ID	F083818
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	43 residues
Representative Sequence	AIAEQQRSLRGRWGEGTNADTETLRETLRMYKTFLDQLIGPRAS
Number of Associated Samples	109
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.89 %
% of genes near scaffold ends (potentially truncated)	99.11 %
% of genes from short scaffolds (< 2000 bps)	89.29 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Unclassified (66.071 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.679 % of family members)
Environment Ontology (ENVO)	Unclassified (17.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.429 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.78% β-sheet: 0.00% Coil/Unstructured: 47.22%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01336	tRNA_anti-codon	44.64
PF14579	HHH_6	20.54
PF01844	HNH	1.79
PF07282	OrfB_Zn_ribbon	0.89
PF11716	MDMPI_N	0.89
PF01252	Peptidase_A8	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0597	Lipoprotein signal peptidase	Cell wall/membrane/envelope biogenesis [M]	1.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
All Organisms	root	All Organisms	33.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
cellular organisms	root	All Organisms → cellular organisms	33.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	30.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30.36 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.36 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	2.68 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.89 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.36 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	2.68 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.89 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.36 %
Quadrisphaera	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Quadrisphaera	2.68 %
Nitrobacter vulgaris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter vulgaris	0.89 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.36 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Quadrisphaera → environmental samples	2.68 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	0.89 %
Nitrobacter vulgaris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter vulgaris	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.36 %
uncultured Quadrisphaera sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Quadrisphaera → environmental samples → uncultured Quadrisphaera sp.	2.68 %
Micromonospora sp. MW-13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. MW-13	0.89 %
Nitrobacter vulgaris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter vulgaris	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004082\|Ga0062384_101357081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	522	Open in IMG/M
3300004635\|Ga0062388_102676464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	525	Open in IMG/M
3300005168\|Ga0066809_10193417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M
3300005467\|Ga0070706_100043476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4152	Open in IMG/M
3300005538\|Ga0070731_11187213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504	Open in IMG/M
3300005557\|Ga0066704_11019091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	511	Open in IMG/M
3300005591\|Ga0070761_10550879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	715	Open in IMG/M
3300005952\|Ga0080026_10164213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	647	Open in IMG/M
3300006878\|Ga0074061_1094583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	755	Open in IMG/M
3300009029\|Ga0066793_10694829	Not Available	578	Open in IMG/M
3300009143\|Ga0099792_10354244	Not Available	886	Open in IMG/M
3300009520\|Ga0116214_1023492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2202	Open in IMG/M
3300009524\|Ga0116225_1546548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300009525\|Ga0116220_10402357	Not Available	612	Open in IMG/M
3300009698\|Ga0116216_10790630	Not Available	569	Open in IMG/M
3300009839\|Ga0116223_10069198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Quadrisphaera → environmental samples → uncultured Quadrisphaera sp.	2267	Open in IMG/M
3300010043\|Ga0126380_11641655	Not Available	575	Open in IMG/M
3300010373\|Ga0134128_11355853	Not Available	784	Open in IMG/M
3300010376\|Ga0126381_104810601	Not Available	519	Open in IMG/M
3300010401\|Ga0134121_10182249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1807	Open in IMG/M
3300010867\|Ga0126347_1184999	Not Available	714	Open in IMG/M
3300010878\|Ga0136899_10266638	Not Available	652	Open in IMG/M
3300011119\|Ga0105246_12159133	Not Available	541	Open in IMG/M
3300012200\|Ga0137382_11301202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300012204\|Ga0137374_10979635	Not Available	613	Open in IMG/M
3300012205\|Ga0137362_10318830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Quadrisphaera → environmental samples → uncultured Quadrisphaera sp.	1346	Open in IMG/M
3300012210\|Ga0137378_10747304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	890	Open in IMG/M
3300012381\|Ga0134026_1178467	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300012392\|Ga0134043_1252271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	789	Open in IMG/M
3300012515\|Ga0157338_1009769	Not Available	956	Open in IMG/M
3300013105\|Ga0157369_12684093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300013307\|Ga0157372_13339270	Not Available	511	Open in IMG/M
3300014054\|Ga0120135_1102946	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300014157\|Ga0134078_10138090	Not Available	948	Open in IMG/M
3300015372\|Ga0132256_100603609	Not Available	1212	Open in IMG/M
3300017821\|Ga0187812_1233516	Not Available	586	Open in IMG/M
3300017822\|Ga0187802_10005106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3941	Open in IMG/M
3300017924\|Ga0187820_1045235	Not Available	1179	Open in IMG/M
3300017959\|Ga0187779_10394725	Not Available	901	Open in IMG/M
3300017970\|Ga0187783_11342442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300017975\|Ga0187782_10786163	Not Available	736	Open in IMG/M
3300018029\|Ga0187787_10369143	Not Available	558	Open in IMG/M
3300018035\|Ga0187875_10142153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1345	Open in IMG/M
3300018035\|Ga0187875_10335812	Not Available	814	Open in IMG/M
3300018043\|Ga0187887_10040621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2888	Open in IMG/M
3300018057\|Ga0187858_10412501	Not Available	837	Open in IMG/M
3300018090\|Ga0187770_11137781	Not Available	630	Open in IMG/M
3300019875\|Ga0193701_1043072	Not Available	921	Open in IMG/M
3300020070\|Ga0206356_11008464	Not Available	584	Open in IMG/M
3300021171\|Ga0210405_11231780	Not Available	553	Open in IMG/M
3300021181\|Ga0210388_10350425	Not Available	1298	Open in IMG/M
3300021374\|Ga0213881_10292613	Not Available	726	Open in IMG/M
3300021402\|Ga0210385_10030237	All Organisms → cellular organisms → Bacteria	3503	Open in IMG/M
3300021404\|Ga0210389_10885337	Not Available	695	Open in IMG/M
3300021407\|Ga0210383_10571050	Not Available	975	Open in IMG/M
3300021433\|Ga0210391_10564666	Not Available	893	Open in IMG/M
3300021475\|Ga0210392_10939875	Not Available	647	Open in IMG/M
3300021478\|Ga0210402_10856770	Not Available	835	Open in IMG/M
3300022467\|Ga0224712_10620733	Not Available	529	Open in IMG/M
3300022530\|Ga0242658_1148028	Not Available	603	Open in IMG/M
3300022724\|Ga0242665_10348600	Not Available	530	Open in IMG/M
3300024227\|Ga0228598_1068816	Not Available	707	Open in IMG/M
3300024271\|Ga0224564_1121182	Not Available	536	Open in IMG/M
3300025905\|Ga0207685_10502508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	638	Open in IMG/M
3300025910\|Ga0207684_10380612	Not Available	1214	Open in IMG/M
3300025921\|Ga0207652_10517561	Not Available	1073	Open in IMG/M
3300025929\|Ga0207664_10102608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. MW-13	2365	Open in IMG/M
3300025931\|Ga0207644_10208946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1542	Open in IMG/M
3300026340\|Ga0257162_1055154	Not Available	508	Open in IMG/M
3300026984\|Ga0208732_1000479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter vulgaris	2350	Open in IMG/M
3300027002\|Ga0209110_1051632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300027173\|Ga0208097_1013446	Not Available	901	Open in IMG/M
3300027371\|Ga0209418_1047259	Not Available	763	Open in IMG/M
3300027545\|Ga0209008_1057853	Not Available	880	Open in IMG/M
3300027725\|Ga0209178_1274659	Not Available	615	Open in IMG/M
3300027915\|Ga0209069_10847333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300028775\|Ga0302231_10417577	Not Available	566	Open in IMG/M
3300028795\|Ga0302227_10278550	Not Available	638	Open in IMG/M
3300029701\|Ga0222748_1111789	Not Available	543	Open in IMG/M
3300029951\|Ga0311371_10223529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2757	Open in IMG/M
3300030054\|Ga0302182_10124054	Not Available	1126	Open in IMG/M
3300030503\|Ga0311370_10232194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Quadrisphaera → environmental samples → uncultured Quadrisphaera sp.	2449	Open in IMG/M
3300030520\|Ga0311372_12238508	Not Available	627	Open in IMG/M
3300030677\|Ga0302317_10298961	Not Available	721	Open in IMG/M
3300030738\|Ga0265462_10568974	Not Available	849	Open in IMG/M
3300031226\|Ga0307497_10709453	Not Available	520	Open in IMG/M
3300031231\|Ga0170824_111909810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300031231\|Ga0170824_111914199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300031544\|Ga0318534_10777705	Not Available	538	Open in IMG/M
3300031572\|Ga0318515_10471516	Not Available	671	Open in IMG/M
3300031573\|Ga0310915_10285374	Not Available	1165	Open in IMG/M
3300031681\|Ga0318572_10472960	Not Available	746	Open in IMG/M
3300031713\|Ga0318496_10009588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4515	Open in IMG/M
3300031713\|Ga0318496_10259040	Not Available	959	Open in IMG/M
3300031751\|Ga0318494_10675578	Not Available	604	Open in IMG/M
3300031763\|Ga0318537_10118356	Not Available	984	Open in IMG/M
3300031768\|Ga0318509_10302531	Not Available	895	Open in IMG/M
3300031769\|Ga0318526_10056347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1510	Open in IMG/M
3300031782\|Ga0318552_10398483	Not Available	702	Open in IMG/M
3300031793\|Ga0318548_10644552	Not Available	514	Open in IMG/M
3300031799\|Ga0318565_10272971	Not Available	822	Open in IMG/M
3300031845\|Ga0318511_10160680	Not Available	986	Open in IMG/M
3300031962\|Ga0307479_10506417	Not Available	1191	Open in IMG/M
3300032054\|Ga0318570_10576751	Not Available	513	Open in IMG/M
3300032059\|Ga0318533_11204074	Not Available	554	Open in IMG/M
3300032515\|Ga0348332_14583369	Not Available	656	Open in IMG/M
3300032828\|Ga0335080_11264141	Not Available	739	Open in IMG/M
3300032897\|Ga0335071_11810030	Not Available	554	Open in IMG/M
3300032898\|Ga0335072_10969655	Not Available	785	Open in IMG/M
3300032954\|Ga0335083_11066743	Not Available	632	Open in IMG/M
3300033134\|Ga0335073_10180702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2640	Open in IMG/M
3300033290\|Ga0318519_10431750	Not Available	787	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.75%
Host-Associated	Host-Associated	6.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.82%
Aquatic	Environmental → Aquatic	8.93%
Plants	Host-Associated → Plants	6.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.79%
Freshwater	Environmental → Aquatic → Freshwater	8.04%
Peat	Environmental → Terrestrial → Peat	6.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.36%
Sediment	Environmental → Aquatic → Sediment	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.89%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.71%
Loam	Environmental → Terrestrial → Soil → Loam	9.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.21%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.57%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.68%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.46%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.46%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.57%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.89%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006878	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010878	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome) (version 7)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012381	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014054	Permafrost microbial communities from Nunavut, Canada - A34_5cm_12M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026984	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048 (SPAdes)	Environmental	Open in IMG/M
3300027002	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062384_1013570811	3300004082	Bog Forest Soil	AIQERASALRGRWGEGSNADTETLRETLRMYRAFMDQLIGSTS*
Ga0062388_1026764642	3300004635	Bog Forest Soil	RAIQERASALRGRWGEGSNADTETLRETLRMYKSFMDQLVGPAS*
Ga0066809_101934171	3300005168	Soil	AIAEQQRSLRGRWGEDSNADTEALRETLRMYKTFLDQLIGSRAS*
Ga0070706_1000434763	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ERASALRGRWGEGSNADTETLRETLRMYRAFMDQLIGPTS*
Ga0070731_111872131	3300005538	Surface Soil	SLRDRWGEGNNADTENLRATLRMYKTFLDQLIGSRATS*
Ga0066704_110190911	3300005557	Soil	TLRDQWGEGSNADTENLRETLRMYKTFLDQLIGSRTSSAS*
Ga0070761_105508792	3300005591	Soil	SALRGRWGEGSNADTETLRETLRMYRAFMDQLIGSTP*
Ga0080026_101642132	3300005952	Permafrost Soil	RAIAARQQAIQERQRSLQDRWGEGTQADTETLRETLRMYRAFLDQLIGPKA*
Ga0074061_10945832	3300006878	Soil	QQAIAEQQRSLRGRWGEGSNADTENLRETLRMYKTFLDQLIGSRTSSAS*
Ga0066793_106948291	3300009029	Prmafrost Soil	AIQERQRSLRGRWGEGTQADTETLRETLRMYRAFLNQLIGPKA*
Ga0099792_103542442	3300009143	Vadose Zone Soil	IAEQQRSLRGRWGAGTNADTETLRATLRMYKTFLDQLIGPRAS*
Ga0116214_10234921	3300009520	Peatlands Soil	AERQRGLRGRWDTTSAADTETLRETLRMYRTFLDQLIGPEPS*
Ga0116225_15465481	3300009524	Peatlands Soil	QQRAIQQQQRSLRGRWGEGTNADTEALRETLRMYRTFLDQLIGPRATADAGRTD*
Ga0116220_104023571	3300009525	Peatlands Soil	RSLRDRWGEGTNADTEGLRETLRMYRTFIDQLIGSRAG*
Ga0116216_107906302	3300009698	Peatlands Soil	EERQRAIAEQQRSLRDRWDEGTNADTEGLRETLRMYRTFIDQLIGSRAG*
Ga0116223_100691981	3300009839	Peatlands Soil	QRGLRGRWDSTAAADTETLRETLRMYRTFLDQLIGPEPS*
Ga0126380_116416551	3300010043	Tropical Forest Soil	EQQRALRGRWGEGTNADTETLRETLRMYKTFLDQLIGPRAS*
Ga0134128_113558531	3300010373	Terrestrial Soil	RAIEERQQAIAEQQRSLRGRWGGDSNADTENLRETLRMYKTFLDQLIGPRA*
Ga0126381_1048106011	3300010376	Tropical Forest Soil	ALRGRWGEGTNADTETLRETLRMYKTFLDQLIGPRAS*
Ga0134121_101822491	3300010401	Terrestrial Soil	GEDSNADTENLRETLRMYKTFLDQLIGSRTSSAS*
Ga0126347_11849991	3300010867	Boreal Forest Soil	ASALRGRWGEGSNADTETLRETLRMYRAFMDQLIGPTS*
Ga0136899_102666381	3300010878	Soil	RAIQERASALRGRWGEGSNADTETLRETLRMYKAFMDQLVGPSS*
Ga0105246_121591332	3300011119	Miscanthus Rhizosphere	LRGRWGEDSNADTENLRETLRMYKTFLDQLIGSRTSSAS*
Ga0137382_113012021	3300012200	Vadose Zone Soil	RQRAIAEQQRTLRDQWGEGSNADTEALRATLRMYKTFLDQLIGPRAS*
Ga0137374_109796352	3300012204	Vadose Zone Soil	QQRSLRGRWGEGTNADTEALRETLRMYKTFLNQLIGSRTSSAG*
Ga0137362_103188302	3300012205	Vadose Zone Soil	QRTLRDQWGEGSNADTEALRATLRMYKTFLDQLIGPRAS*
Ga0137378_107473041	3300012210	Vadose Zone Soil	RQRAIAEQQRSLRDQWGEGSNADTEALRATLRMYKTFLDQLIGPRAS*
Ga0134026_11784673	3300012381	Grasslands Soil	AEQQRSLRGRWGEDTNADTENLRETLRMYKTFLDQLIGPRAS*
Ga0134043_12522712	3300012392	Grasslands Soil	EERQRAIAEQQRTLRDQWGEGSNADTENLRATLRMYKTFLDQLIGSRTSSAS*
Ga0157338_10097691	3300012515	Arabidopsis Rhizosphere	LRDRWGEGSNADTENLRATLRMYKTFLDQLIGPRAG*
Ga0157369_126840931	3300013105	Corn Rhizosphere	EERQQAIAEQQRSLRGRWGEDSNADTENLRETLRMYKTFLDQLIGSRTSSAS*
Ga0157372_133392702	3300013307	Corn Rhizosphere	ERQQAIAEQQRSLRGRWGEDSNADTENLRETLRMYKTFLDQLIGSRTSSAS*
Ga0120135_11029461	3300014054	Permafrost	QKAIAEQQRSLRDRWGEGNNADTENLRATLRMYKTFLDQLIGAKATS*
Ga0134078_101380902	3300014157	Grasslands Soil	EQQRSLRGRWGEDSNADTEALRETLRMYKTFLDQLIGSRTSNVS*
Ga0132256_1006036091	3300015372	Arabidopsis Rhizosphere	RSLRGRWGEDSNADTENLRETLRMYKTFLDQLIGSRTSSAS*
Ga0187812_12335162	3300017821	Freshwater Sediment	AIQERASALRGRWGEGSNADTETLRETLRMYRAFMDQLIGPTA
Ga0187802_100051061	3300017822	Freshwater Sediment	QRGLRGRWDTTSAADTETLRETLRMYRTFLDQLIGPEPS
Ga0187820_10452351	3300017924	Freshwater Sediment	QGLIAERQRSLRGRWGEGTNADTETLRETLQMYRAFLDQLTGAR
Ga0187779_103947251	3300017959	Tropical Peatland	AIQERASALRGRWGEGSNADTETLRETLRMYRAFMDQLIGPAA
Ga0187783_113424421	3300017970	Tropical Peatland	ERQRAIAEQQRSLRGRWGEGTDTDTEALRETLRMYRTFLDQLIGPRA
Ga0187782_107861632	3300017975	Tropical Peatland	DLRGRWDTGAPADTETLRETLRMYRSFLDQLIGPEPS
Ga0187787_103691432	3300018029	Tropical Peatland	RTLRGRWGDGANADTEALRETLRMYKTFLDQLIGPRAG
Ga0187875_101421531	3300018035	Peatland	NRQRSLRDRWGEGSEADTETLRETLRMYRAFLDQLIGPKA
Ga0187875_103358121	3300018035	Peatland	RQRSLRDRWGEGSEADTETLRETLRMYRAFLDQLVGPKV
Ga0187887_100406211	3300018043	Peatland	QRSLRGRWGEGTEADKETLRETLRMYRAFLDQLIGPKA
Ga0187858_104125011	3300018057	Peatland	ERQQAIAERQRSLRGRWGEGAEADTETLRETLRMYRAFLDQLIGPKA
Ga0187770_111377812	3300018090	Tropical Peatland	GLRGRWDTTSAADTETLRETLRMYRTFLDQLIGPEPS
Ga0193701_10430722	3300019875	Soil	AIAEQQRSLRGRWGEGSNADTENLRETLRMYKTFLDQLIGSRTSSAS
Ga0206356_110084641	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	ERQQAIAEQQRSLRGRWGEDSNADTENLRETLRMYKTFLDQLIGSRTSSAS
Ga0210405_112317802	3300021171	Soil	ERQRGLRGRWDTTSAADTETLRETLRMYRTFLDQLIGPEPS
Ga0210388_103504251	3300021181	Soil	AIQERASALRGRWGEGSNADTETLRETLRMYRAFMDQLIGSTP
Ga0213881_102926132	3300021374	Exposed Rock	LRGRWGEGTNADTEALRETLRLYKTFLDQLIGSRVS
Ga0210385_100302372	3300021402	Soil	RASALRGRWGEGSNADTETLRETLRMYRAFMDQLIGSTP
Ga0210389_108853371	3300021404	Soil	NSLRGRWGEGSNADTENLRETLRMYKTFLDQLIGSRTS
Ga0210383_105710502	3300021407	Soil	DRQHAIAEQQRSLRGRWGEGTNADTEALRETLRMYKTFLDQLIGPRAS
Ga0210391_105646662	3300021433	Soil	RSLRGRWDGGTQADTEVLRETLRMYRAFLYQLIGSSGTSGS
Ga0210392_109398752	3300021475	Soil	SLRGRWGEGSNADTENLRETLRMYKTFLDQLIGSRTS
Ga0210402_108567702	3300021478	Soil	IAEQQRSLRGRWGEGSNADTESMRETLRMYKTFLDQLIGPRAG
Ga0224712_106207331	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	EQQRSLRDRWGEGSNADTENLRATLRMYKTFLDQLIGPRA
Ga0242658_11480281	3300022530	Soil	QERQQAIAEQQRSLRGRWGEDSNADTENLRETLRMYKTFLDQLIGSRTSAAS
Ga0242665_103486002	3300022724	Soil	QRTLRDRWGEGSNADTEALRATLRMYKTFLDQLIGPRAS
Ga0228598_10688161	3300024227	Rhizosphere	RQRAIQERASALRGRWGEGSNADTETLRETLRMYRAFMVQLIGRTS
Ga0224564_11211821	3300024271	Soil	QERQRSLHDRWGGGSEADTETLRETLRMYRAFLDQLIGSKA
Ga0207685_105025082	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	RAIEERQRAIAEQQRSLRDRWGEGSNADTENLRATLRMYKTFLDQLIGPRA
Ga0207684_103806121	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	ERASALRGRWGEGSNADTETLRETLRMYRAFMDQLIGPTS
Ga0207652_105175612	3300025921	Corn Rhizosphere	IAEQQRSLRGRWGEDSNADTENLRETLRMYKTFLDQLIGSRTSSAS
Ga0207664_101026081	3300025929	Agricultural Soil	QQRTLRDQWGEGSNADTENLRATLRMYKTFLDQLIGSRTSSAS
Ga0207644_102089462	3300025931	Switchgrass Rhizosphere	GRWGEDSNADTENLRETLRMYKTFLDQLIGSRTSSAS
Ga0257162_10551541	3300026340	Soil	AEQQRSLRGRWGEDSNADTEVLRETLRMYKTFLDQLIGSRAS
Ga0208732_10004791	3300026984	Forest Soil	QHAIAEQQRSLRGRWGEGTNADTEALRETLRMYKTFLDQLIGPRAS
Ga0209110_10516322	3300027002	Forest Soil	QERASALRGRWGEGSNADTETLRETLRMYKAFMDQLVGPSS
Ga0208097_10134461	3300027173	Forest Soil	IAERQQSLRGRWGDGTNADTETLRATLLMYRAFLDQLTGPRIS
Ga0209418_10472591	3300027371	Forest Soil	IEERQHAIAEQQRSLRGRWGEGSNADTETLRETLRMYKTFLDQLIGPRAS
Ga0209008_10578532	3300027545	Forest Soil	AIEERKQAIQERASALRGRWGEGSNADTETLRETLRMYRAFMDQLIGSTS
Ga0209178_12746592	3300027725	Agricultural Soil	LRDRWGEGSNADTENLRATLRMYKTFLDQLIGPRA
Ga0209069_108473332	3300027915	Watersheds	MRPGSTPDPWGEGTNADTEALRETLRMYRTFLDQLIGPRAG
Ga0302231_104175771	3300028775	Palsa	ERAGALRGRWGEGSNADTETLRETLRMYRAFMDQLIGPAA
Ga0302227_102785502	3300028795	Palsa	ERQQAIQDRQRSLRGRWGEGAEADTETLRETLRMYRAFLDQLIGPKV
Ga0222748_11117892	3300029701	Soil	RAIEERQHAIAEQQRSLRGRWGEGTNADTEALRETLRMYKTFLDQLIGARAS
Ga0311371_102235291	3300029951	Palsa	QRSLRGRWGEGAEADTETLRETLRMYRAFLDQLIGPKV
Ga0302182_101240542	3300030054	Palsa	SLRGRWGEGAEADTETLRETLRMYRAFLDQLIGPKV
Ga0311370_102321942	3300030503	Palsa	IQEQQTSLRGRWGEGSEADTETLRATLRMYKAFLDQLVGPKA
Ga0311372_122385081	3300030520	Palsa	RSLRGRWGEGSEADTETLRETLRMYRAFLDQLIGSKA
Ga0302317_102989612	3300030677	Palsa	AIQERQRSLRGRWGEGAEADTETLRETLRMYRAFLDQLIGPKA
Ga0265462_105689741	3300030738	Soil	ERQRGLRGRWDSTSAADTETLRETLRMYRTFLDQLIGPEPS
Ga0307497_107094531	3300031226	Soil	SLRGRWGEGSNADTEALRETLRMYKTFLDQLIGPRAS
Ga0170824_1119098102	3300031231	Forest Soil	AIAEQQRTLRDQWGEGSNADTENLRETLRMYKTFLDQLIGPRASSR
Ga0170824_1119141992	3300031231	Forest Soil	AIAEQQRTLRDQWGEGSNADTENLRETLRMYKTFLDQLIGQRVS
Ga0318534_107777051	3300031544	Soil	AEQQRALRGRWGEGANADTETLRQTLRMYKTFLDQLIGPRASRR
Ga0318515_104715161	3300031572	Soil	HAIAEQQRSLRGRWGEGTHADTETLRETLRMYKTFLDQLIGSRVS
Ga0310915_102853741	3300031573	Soil	QRSLRARWSEGARADTETLRATLLTYRAFLDQLTGAR
Ga0318572_104729602	3300031681	Soil	QRAIAEQQRSLRGRWGEGTNADTEALRETLRMYKTFLDQLIGPRAS
Ga0318496_100095883	3300031713	Soil	RWGEGANADTETLRQTLRMYKTFLDQLIGPRASRR
Ga0318496_102590402	3300031713	Soil	AIAEQQRSLRGRWGEGTNADTETLRETLRMYKTFLDQLIGPRAS
Ga0318494_106755781	3300031751	Soil	IQERASALRGRWGEGSNADTETLRETLRMYRAFMDQLVGPTA
Ga0318537_101183561	3300031763	Soil	QRAIAEQQRSLRGRWGEGTNADTETLRETLRMYKTFLDQLIGSRAS
Ga0318509_103025311	3300031768	Soil	AIAEQQRTLRDRWGQGTNADTETLRETLRMYKTFLDQLIGSRAG
Ga0318526_100563471	3300031769	Soil	RGRWGEGANADTETLRQTLRMYKTFLDQLIGPRASRR
Ga0318552_103984832	3300031782	Soil	EQQRALRGRWGEGANADTETLRQTLRMYKTFLDQLIGPRASRR
Ga0318548_106445521	3300031793	Soil	GAIQERQRAIAEQQRSLRGRWGEGTNADTETLRETLRMYKTFLDQLIGSRAS
Ga0318565_102729711	3300031799	Soil	IAEQQRTLRDRWGQGTNADTETLRETLRMYKTFLDQLIGSRAG
Ga0318511_101606802	3300031845	Soil	ERQRSLRGRWAEGSNADTEALRETLLMYKSFLDQLIGPGRAS
Ga0307479_105064171	3300031962	Hardwood Forest Soil	RAIEERQQAIQERASALRGRWGEGSNADTETLRETLRMYRAFMDQLIGSTS
Ga0318570_105767512	3300032054	Soil	LRGRWGEGTNADTETLRETLRMYKTFLDQLIGSRAS
Ga0318533_112040742	3300032059	Soil	LSLRGRWGEGTNADTETLRETLRMYKTFLDQLIGPRAS
Ga0348332_145833692	3300032515	Plant Litter	QRSLRDRWGEGSQADTETLRETLRMYRAFLDQLIGPKA
Ga0335080_112641412	3300032828	Soil	AIQERQRAIQERASALRGRWGEGSNADTEMLRETLRMYRAFIDQLVRPAS
Ga0335071_118100301	3300032897	Soil	QQQRSLRGRWSEGTNADTENLRETLRMYKTFLDQLIGPRAS
Ga0335072_109696552	3300032898	Soil	HAIAEQQRSLRGRWGEDSNADTEALRETLRMYKTFLDQLIGSRTS
Ga0335083_110667431	3300032954	Soil	RQHAIAEQQRSLRGRWGEGSNADTETLRETLRMYKTFLDQLIGPRAS
Ga0335073_101807021	3300033134	Soil	QEQQRSLRGRWGEDSNADTEALRETLRMYKTFLDQLIGSRTADVS
Ga0318519_104317501	3300033290	Soil	AIAEHQHTLPGRWGEVTNADTETLRETLRMYKTFLDQLIGPRAS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083818

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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