NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F083221

Metagenome / Metatranscriptome Family F083221

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F083221
Family Type Metagenome / Metatranscriptome
Number of Sequences 113
Average Sequence Length 43 residues
Representative Sequence MSFLDRFRKKTEDEASRIARLSKTGRMTDGHIIDAVSDNDGR
Number of Associated Samples 91
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 12.50 %
% of genes near scaffold ends (potentially truncated) 99.12 %
% of genes from short scaffolds (< 2000 bps) 95.58 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.345 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere
(10.620 % of family members)
Environment Ontology (ENVO) Unclassified
(61.947 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(72.566 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 25.71%    β-sheet: 5.71%    Coil/Unstructured: 68.57%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF01066CDP-OH_P_transf 5.31
PF13614AAA_31 0.88
PF10415FumaraseC_C 0.88
PF00392GntR 0.88
PF01842ACT 0.88
PF03449GreA_GreB_N 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 113 Family Scaffolds
COG0558Phosphatidylglycerophosphate synthaseLipid transport and metabolism [I] 5.31
COG1183Phosphatidylserine synthaseLipid transport and metabolism [I] 5.31
COG5050sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferasesLipid transport and metabolism [I] 5.31
COG0782Transcription elongation factor, GreA/GreB familyTranscription [K] 0.88


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.35 %
UnclassifiedrootN/A2.65 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2044078002|MGR_F548DK202J3TSPAll Organisms → cellular organisms → Bacteria → Acidobacteria527Open in IMG/M
2067725003|GPWSG_F5G3JLY01DK4K4All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101363656All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1145Open in IMG/M
3300000956|JGI10216J12902_103438409All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium882Open in IMG/M
3300000956|JGI10216J12902_109459639All Organisms → cellular organisms → Bacteria1641Open in IMG/M
3300003319|soilL2_10184328All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1102Open in IMG/M
3300003324|soilH2_10207614All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1231Open in IMG/M
3300004643|Ga0062591_101293730All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium716Open in IMG/M
3300005295|Ga0065707_10681114All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium648Open in IMG/M
3300005295|Ga0065707_10765635All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium612Open in IMG/M
3300005328|Ga0070676_11073591All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium607Open in IMG/M
3300005338|Ga0068868_101644307All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium604Open in IMG/M
3300005339|Ga0070660_100090700All Organisms → cellular organisms → Bacteria → Acidobacteria2410Open in IMG/M
3300005341|Ga0070691_10802038All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium573Open in IMG/M
3300005344|Ga0070661_100540900All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium936Open in IMG/M
3300005345|Ga0070692_10471270All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium808Open in IMG/M
3300005345|Ga0070692_10718193All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium674Open in IMG/M
3300005347|Ga0070668_101570565All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium602Open in IMG/M
3300005356|Ga0070674_102050923All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium521Open in IMG/M
3300005459|Ga0068867_100625442All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium942Open in IMG/M
3300005459|Ga0068867_101259584All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium681Open in IMG/M
3300005467|Ga0070706_101499231All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium616Open in IMG/M
3300005545|Ga0070695_101003072All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium679Open in IMG/M
3300005547|Ga0070693_101360676All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium551Open in IMG/M
3300005549|Ga0070704_101643079All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium593Open in IMG/M
3300005578|Ga0068854_100889065All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium782Open in IMG/M
3300005616|Ga0068852_100330466All Organisms → cellular organisms → Bacteria → Acidobacteria1483Open in IMG/M
3300005617|Ga0068859_100371963All Organisms → cellular organisms → Bacteria1525Open in IMG/M
3300005718|Ga0068866_10665925All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium710Open in IMG/M
3300005719|Ga0068861_100904585All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium836Open in IMG/M
3300005842|Ga0068858_101545618All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium655Open in IMG/M
3300005844|Ga0068862_102392542All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium540Open in IMG/M
3300006049|Ga0075417_10754605All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium502Open in IMG/M
3300006169|Ga0082029_1202632All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium730Open in IMG/M
3300006169|Ga0082029_1448523All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium945Open in IMG/M
3300006755|Ga0079222_10825502All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium762Open in IMG/M
3300006847|Ga0075431_100298915All Organisms → cellular organisms → Bacteria1626Open in IMG/M
3300006852|Ga0075433_11238685All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium647Open in IMG/M
3300006852|Ga0075433_11665509All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium550Open in IMG/M
3300006904|Ga0075424_100794048All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1010Open in IMG/M
3300006954|Ga0079219_10268067All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1030Open in IMG/M
3300006954|Ga0079219_11534334All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium606Open in IMG/M
3300006969|Ga0075419_10848262All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium656Open in IMG/M
3300009094|Ga0111539_10354538All Organisms → cellular organisms → Bacteria → Acidobacteria1707Open in IMG/M
3300009098|Ga0105245_11788857All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium667Open in IMG/M
3300009100|Ga0075418_11974168All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium635Open in IMG/M
3300009101|Ga0105247_11065689All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium635Open in IMG/M
3300009147|Ga0114129_10709934All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes1291Open in IMG/M
3300009174|Ga0105241_10781070All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium878Open in IMG/M
3300009174|Ga0105241_11380136All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium674Open in IMG/M
3300009174|Ga0105241_12328772All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300009176|Ga0105242_12873896All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium532Open in IMG/M
3300009840|Ga0126313_11834138All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium508Open in IMG/M
3300010375|Ga0105239_13317928All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium524Open in IMG/M
3300010399|Ga0134127_11413326All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium767Open in IMG/M
3300010399|Ga0134127_11436107All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium761Open in IMG/M
3300011119|Ga0105246_10296288All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes1304Open in IMG/M
3300011119|Ga0105246_10342541All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1222Open in IMG/M
3300011332|Ga0126317_11019954All Organisms → cellular organisms → Bacteria → Acidobacteria1673Open in IMG/M
3300011333|Ga0127502_11001969All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium585Open in IMG/M
3300012201|Ga0137365_10606001All Organisms → cellular organisms → Bacteria → Acidobacteria802Open in IMG/M
3300012918|Ga0137396_10636189Not Available788Open in IMG/M
3300012922|Ga0137394_10747119All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium822Open in IMG/M
3300012931|Ga0153915_13198578All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium532Open in IMG/M
3300013100|Ga0157373_10464775All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium912Open in IMG/M
3300013102|Ga0157371_11207100All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium583Open in IMG/M
3300013102|Ga0157371_11471265All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium531Open in IMG/M
3300013306|Ga0163162_11020513All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium936Open in IMG/M
3300013308|Ga0157375_11828141All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium720Open in IMG/M
3300013308|Ga0157375_12611430All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium603Open in IMG/M
3300014320|Ga0075342_1238469All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300014745|Ga0157377_10130606All Organisms → cellular organisms → Bacteria → Acidobacteria1534Open in IMG/M
3300015371|Ga0132258_12375665All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes1328Open in IMG/M
3300015371|Ga0132258_13193886All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1131Open in IMG/M
3300015372|Ga0132256_101491574All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium787Open in IMG/M
3300015374|Ga0132255_102110401All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium859Open in IMG/M
3300018071|Ga0184618_10327028Not Available654Open in IMG/M
3300018466|Ga0190268_11877253All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium544Open in IMG/M
3300025903|Ga0207680_10207050All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1339Open in IMG/M
3300025903|Ga0207680_10687888All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium733Open in IMG/M
3300025908|Ga0207643_10614472All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium700Open in IMG/M
3300025924|Ga0207694_11180650All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium648Open in IMG/M
3300025927|Ga0207687_11954337All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium501Open in IMG/M
3300025934|Ga0207686_10186937All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1474Open in IMG/M
3300025937|Ga0207669_11217467All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium638Open in IMG/M
3300025937|Ga0207669_11303984All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium617Open in IMG/M
3300025940|Ga0207691_10971512All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium709Open in IMG/M
3300025960|Ga0207651_10185240All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1656Open in IMG/M
3300025960|Ga0207651_11863914All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium541Open in IMG/M
3300025961|Ga0207712_11506280All Organisms → cellular organisms → Bacteria → Acidobacteria603Open in IMG/M
3300026023|Ga0207677_11344668All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium657Open in IMG/M
3300026035|Ga0207703_11305997All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium698Open in IMG/M
3300026088|Ga0207641_11587254All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium656Open in IMG/M
3300026095|Ga0207676_10938029All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium850Open in IMG/M
3300026095|Ga0207676_11225234All Organisms → cellular organisms → Bacteria → Acidobacteria744Open in IMG/M
3300026118|Ga0207675_101868757All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium619Open in IMG/M
3300027514|Ga0208338_1000047All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes57461Open in IMG/M
3300027637|Ga0209818_1140538All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium670Open in IMG/M
3300027691|Ga0209485_1029209All Organisms → cellular organisms → Bacteria1318Open in IMG/M
3300027876|Ga0209974_10423523All Organisms → cellular organisms → Bacteria → Acidobacteria525Open in IMG/M
3300027880|Ga0209481_10476750All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium643Open in IMG/M
3300028380|Ga0268265_12322156All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium543Open in IMG/M
3300028381|Ga0268264_10139103All Organisms → cellular organisms → Bacteria → Acidobacteria2163Open in IMG/M
3300028381|Ga0268264_10983204All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium850Open in IMG/M
3300030511|Ga0268241_10070051All Organisms → cellular organisms → Bacteria → Acidobacteria778Open in IMG/M
3300031716|Ga0310813_11134035All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium718Open in IMG/M
3300031716|Ga0310813_11834306All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium570Open in IMG/M
3300031852|Ga0307410_10266897All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1337Open in IMG/M
3300031944|Ga0310884_11084993All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium500Open in IMG/M
3300033412|Ga0310810_10174023All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes2469Open in IMG/M
3300033412|Ga0310810_11214466All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium609Open in IMG/M
3300034172|Ga0334913_145971All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere10.62%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere9.73%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.19%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.31%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere5.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.42%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.42%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere4.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.54%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.65%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.65%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.65%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil1.77%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.77%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.77%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest1.77%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.77%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.77%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.77%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.89%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.89%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.89%
Sub-Biocrust SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.89%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.89%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.89%
Switchgrass, Maize And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass, Maize And Miscanthus Rhizosphere0.89%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.89%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2044078002Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, ILHost-AssociatedOpen in IMG/M
2067725003Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011333Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014320Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027514Forest soil microbial communities from Browns Valley, California, USA, that are Nitrogen fertilized - NN91 (SPAdes)EnvironmentalOpen in IMG/M
3300027637Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300030511Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300034172Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMSEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
MGR_1844302044078002Switchgrass, Maize And Miscanthus RhizosphereMSFLDRFRKKTEDEASRIARLSRTGRMADGSIIDAASDAAGRIIQVTYTYT
GPWSG_002711302067725003SoilMSFLDRFRKKTEDETSRIARLSRTGRMTDGNIIDAESDGDGKIIQ
INPhiseqgaiiFebDRAFT_10136365613300000364SoilMSFIDRFRKKKEDEASRIARLSKTGRMADGRIIDAVST
JGI10216J12902_10343840913300000956SoilMSFLDRFRKKVEDEASRFARLSKTGRMTDGNIIDAVS
JGI10216J12902_10945963913300000956SoilMSFLDRFRKKTEDESSRIERLSKTGRMTDGEIIDAVSDDSG
soilL2_1018432813300003319Sugarcane Root And Bulk SoilMSFLNRFRRKTEDEASRIARLSKTGRMTDGQIIDAVSDGDGKIVQ
soilH2_1020761433300003324Sugarcane Root And Bulk SoilMSFLDRFRKRVEDEASRIARLSKTGRMTDGNIIDAVSDNSGRITQVTYTYML
Ga0062591_10129373023300004643SoilMSFLDRFRKKTEDEASRIARLSRTGRMADGSIIDAASDAAGRIIQVTYT
Ga0065707_1068111423300005295Switchgrass RhizosphereMSFLDRFRKKIEDEASRIERLSKTGRMGDGRIIDAVSDNDGR
Ga0065707_1076563523300005295Switchgrass RhizosphereMSFLDRFRKKIEDEASRIARLSKTGRMVDGKIIDAVSDNEGRLLHVN
Ga0070676_1107359123300005328Miscanthus RhizosphereMSFLDRFRRKTEDETTRIARLSRTGRMADGRILDAVSDNDGRIL
Ga0068868_10164430723300005338Miscanthus RhizosphereMSFLDRFRKKPEDEASRIERLSKTGRMADGRIIDAVSDNEGR
Ga0070660_10009070053300005339Corn RhizosphereMSFLDRFRKKKEDEPARIARLSKTGRMADGRILDAVSDNDGRILQVIYTYT
Ga0070691_1080203823300005341Corn, Switchgrass And Miscanthus RhizosphereMSFLDRFRRKTEDETTRIARLSRTGRMADGRILDAVSDNDGRILQVTY
Ga0070661_10054090023300005344Corn RhizosphereMSFLDRFRKKPEDEASRIARLSKTGRMADGRIIDAVSDNE
Ga0070692_1047127023300005345Corn, Switchgrass And Miscanthus RhizosphereMSFLDRFRKKTEDEASRIARLSKTGRMTDGNIIDAVSDNHGHI
Ga0070692_1071819323300005345Corn, Switchgrass And Miscanthus RhizosphereMSFLDRFRKKKEDEASRIARLSKTGRMADGRIIDAVSMDDGTITQVT
Ga0070668_10157056523300005347Switchgrass RhizosphereMSFLDRFRKKKEDEPARIARLSKTGRMADGRILDAVSDNDGRILQVIYTY
Ga0070674_10205092323300005356Miscanthus RhizosphereMSFLDRFRKKREDEASRIVRLSKTGRMADGRIIDAVSADDGTITQV
Ga0068867_10062544223300005459Miscanthus RhizosphereMSFLDRFRKRTEDEASRIARLSKTGRMTDGNIIDAVSDNDGR
Ga0068867_10125958413300005459Miscanthus RhizosphereMSFLDRFRKKVEDEASRIARLSKTGRMTDGNIIDAVSDNNG
Ga0070706_10149923113300005467Corn, Switchgrass And Miscanthus RhizosphereMSFLDRFRRKTEDEASRIARLSRTGRMIDGSIIDAVSDPDGKI
Ga0070695_10100307223300005545Corn, Switchgrass And Miscanthus RhizosphereMSFLDRFRKRVEDEASRIARLSKTGRMTDGNIIDAVSDNSGRITQVTY
Ga0070693_10136067623300005547Corn, Switchgrass And Miscanthus RhizosphereMSFLDRFRKRTEDEASRIARLSKTGRMVDGKIIDAISDHNG
Ga0070704_10164307923300005549Corn, Switchgrass And Miscanthus RhizosphereMSFLDRFRKRVEDEASRVARLSKTGRMTDGSIIDAVSDNNGRITQVTYT
Ga0068854_10088906513300005578Corn RhizosphereMSFLDRFRKKPEDEASRIARLSKTGRMADGQIIDAISH
Ga0068852_10033046633300005616Corn RhizosphereMSFLDRFRKKREDEASRIARLSKTGRMADGRVIDAVSSDD
Ga0068859_10037196313300005617Switchgrass RhizosphereMSFLDRFRKKFEDEASRIERLSKTGRMADGRIIDAESDNDGRITQVSYTYIL
Ga0068866_1066592513300005718Miscanthus RhizosphereMSFLDRFRKKREDEASRIARLSKTGRMADGRVIDAVSSDDGTITQ
Ga0068861_10090458513300005719Switchgrass RhizosphereMSFLDRFRKKVEDEASRIARLSKTGRMTDGNIIDAVSD
Ga0068858_10154561823300005842Switchgrass RhizosphereMSFLDRFRKKVEDEASRIARLSKTGRMTDGNIIDAVSDN
Ga0068862_10239254223300005844Switchgrass RhizosphereMSFLDRFRKKTEDEASRIERLSKTGRMADGRIIDAVSDNDGRITEVTYTYI
Ga0075417_1075460513300006049Populus RhizosphereMSFLDRFRRKNEDEASRIARLAKTGRITDGKILDVTTDKDGQIIQVNYNYM
Ga0082029_120263213300006169Termite NestMSFLDRFRKKIEDEASRIARLSKTGRMTDGNIIDAVSD
Ga0082029_144852313300006169Termite NestMSFLDRFRKKSEDEPSRIARLSRTGRMADGKIIDAVSDNDGRI
Ga0079222_1082550213300006755Agricultural SoilMSFLDRFRKKTEDEASRIERLSKAGRMADGRIIDAVSENDGRITQVTYT
Ga0075431_10029891533300006847Populus RhizosphereMSFLDRFRKKTEDEASRIARLSKTGRMGDGKIIDAVTASDGR
Ga0075433_1123868513300006852Populus RhizosphereMSFLDRFRRKTEDEASRIARLSKTGRITDGSIIDAVTEN
Ga0075433_1166550923300006852Populus RhizosphereMSFLDRFRKKPEDEASRIARLAKTGRMADGRIIDAVSDTEGRISQV
Ga0075424_10079404813300006904Populus RhizosphereMSFLDRFRKKIEDEASRIARLSKTGRMADGRIIDAVSDNNGRITHVS
Ga0079219_1026806713300006954Agricultural SoilMSFLDRFRKKQEDEASRIARLSKTGRMADGRIIDA
Ga0079219_1153433423300006954Agricultural SoilMSFLDRFRKRTEDEASRIARLSKTGRMVDGKIIDAV
Ga0075419_1084826223300006969Populus RhizosphereMSFLNRFRKKREDEASRIERLSKTGRIADGRIIDVVSTDDGTITHVTYAY
Ga0111539_1035453813300009094Populus RhizosphereMSFLDRFRKKTEDEASRIARLSKTGRMTDGHIIDAVSDNDGR
Ga0105245_1178885713300009098Miscanthus RhizosphereMSFLDRFRKKPEDEASRIERLSKTGRMADGRIIDAVSDNDGRITQVTYTY
Ga0075418_1180310613300009100Populus RhizosphereMSFLDRFRRKNEDEASRIARLAKTGRITDGKILDVT
Ga0075418_1197416813300009100Populus RhizosphereMSFLDRFRKRVEDEASRIARLSKTGRMTDGSIIDAVSDNNGRITQVTYTYML
Ga0105247_1106568923300009101Switchgrass RhizosphereMSFLTRFRKKTEDEASRIARLSQTGRMADGRIVDAVSDDDGH
Ga0114129_1070993413300009147Populus RhizosphereMSFLDRFRKKTEDEASRIARLSKTGRMADGKIIDAVTA
Ga0105241_1078107013300009174Corn RhizosphereMSFLDRFRKKTEDEASRIARLSRTGRMVDGKIIDAVSDDNGRLL
Ga0105241_1138013613300009174Corn RhizosphereMSFLNRFRRKTEDEPSRIARLAKTGRMTDGQIIDAISNRDGKIVQVT
Ga0105241_1232877223300009174Corn RhizosphereMSFLDRFRKRTEDEASRIARLSKTGRMTDGNIIDAVS
Ga0105242_1287389623300009176Miscanthus RhizosphereMSFLDRFRKRPEDEASRIARLSKTGRMVDGKIIDAVSDNEGRIL
Ga0126313_1183413823300009840Serpentine SoilMSFLDRFRKRTEDEASRIARLSKTGRMVDGKIIDAVSDKDGRLL
Ga0105239_1331792823300010375Corn RhizosphereMSFLDRFRKKPEDEASRIERLSKTGRMADGRIIDA
Ga0134127_1141332623300010399Terrestrial SoilMSFLDRFRKKVEDEASRVARLSKSGRMTDGNIIDAESDNNGRITQV
Ga0134127_1143610713300010399Terrestrial SoilMSFLDRFRKKTEDEASRIERLSKTGRMADGRIIDAVSDNDGRI
Ga0105246_1029628813300011119Miscanthus RhizosphereMSFLDRFRKRTEDEASRIARLSKTGRMVDGKIIDAVSDNDGRI
Ga0105246_1034254113300011119Miscanthus RhizosphereMSFLDRFRKKTEDEASRIARLSRTGRMADGKIIDAVSA
Ga0126317_1101995433300011332SoilMSFLDRFRKKKEDEASRIARLSKTGRMADGRIIDAVSADDGTITQVTY
Ga0127502_1100196913300011333SoilMSFLDRFRKKTEDEASRITRLSKTGRMTDGNIIDAASDS
Ga0137365_1060600113300012201Vadose Zone SoilMSFLDRFRRKKEDEASRFARLLRTGRITEGSIIDVTLDRSRVSDKI
Ga0137396_1063618913300012918Vadose Zone SoilMSFLDRFRHKQEDETARVARISKTGRIADGVVLDATSDSNGLITQVC
Ga0137394_1074711913300012922Vadose Zone SoilMSFFDRFRKKKEDETARVARLSKTGRIADGVVLDATSDSNG
Ga0153915_1319857813300012931Freshwater WetlandsMSFLDRFRSKKEDEASRISRLLKTGRMVDGRVLDAVCDS
Ga0157373_1046477523300013100Corn RhizosphereMSFLDRFRKKIEDEASRIERLSKTGRMADGKIIDAVSDN
Ga0157371_1120710013300013102Corn RhizosphereMSFLDRFRKKTEDEASRIARLSRTGRMVDGKIIDAVSDNDGRL
Ga0157371_1147126513300013102Corn RhizosphereMSFLDRFRKKKEDEPARIARLSKTGRMADGRILDAMSDNDGR
Ga0163162_1102051323300013306Switchgrass RhizosphereMSFLDRFRRKTEDETSRIARLARTGRITDGQIIDAVSDRNGKIIQ
Ga0157375_1182814123300013308Miscanthus RhizosphereMSFLNRFRKKREDEPSRIARLSKTGRMTDGRIIDAVTIDDGTITQV
Ga0157375_1261143023300013308Miscanthus RhizosphereMSFLDRFRRKVEDEASRIARLSKTGRMTDGSIIDATSDLDGKITQVTY
Ga0075342_123846923300014320Natural And Restored WetlandsMSFLDRFRKKTEDEASRIARLSKTGRIADGRVIDAISSEDGTILQVVYT
Ga0157377_1013060613300014745Miscanthus RhizosphereMSFLDRFRKKVEDEASRIARLSRTGRMTDGNIIDAVSDNS
Ga0132258_1237566513300015371Arabidopsis RhizosphereMSFLNRFRRKTEDESSRIARLSKTGRMTDGNIIDAVSDGDGKIIQVTY
Ga0132258_1319388613300015371Arabidopsis RhizosphereMSFLDRFRKKQEDEASRIARLSKTGRMADGRIIDAMSAAD
Ga0132256_10149157423300015372Arabidopsis RhizosphereMSFLDRFRRKKEDEASRVARLSKTGRMIDGKILDAASDRD
Ga0132255_10211040123300015374Arabidopsis RhizosphereMSFLDRFRKKKEDEASRIARLAKTGRMVDGRIIDAESDRDGKILQVTYTY
Ga0184618_1032702813300018071Groundwater SedimentMSFFDRFRKKKEDETARVARLSKTGRIADGVVLDATSDSN
Ga0190268_1187725313300018466SoilMSFLDRFRKKTEDEASRIARLSRTGRMADGKIIDAVTASD
Ga0207680_1020705013300025903Switchgrass RhizosphereMSFLDRFRKKKEDEASRIARLSKTGRMADGRIIDAVSSDDGAITQV
Ga0207680_1068788823300025903Switchgrass RhizosphereMSFLDRFRKRVEDEASRIARLSKTGRMTDGNIIDAVSDNNGRITQVTY
Ga0207643_1061447213300025908Miscanthus RhizosphereMSFLNRFRKKPEDEASRIERLSKTGRMTDGRIIDAVSDNEGRISQVTYTYI
Ga0207694_1118065023300025924Corn RhizosphereMSFLDRFRKRTEDEASRIARLSKTGRMVDGKIIDAVSDD
Ga0207687_1195433713300025927Miscanthus RhizosphereMSFLDRFRKKIEDVASRIERLSKTGRMGDGRIIDA
Ga0207686_1018693713300025934Miscanthus RhizosphereMSFLDRFRRKTEDETTRIARLSRTGRMADGRILDAVSDNDGRILQ
Ga0207669_1121746713300025937Miscanthus RhizosphereMSFLNRFRKKKEDEPSRIARLSKTGRMTDGRIIDAVTIDDGTITQVTYTYT
Ga0207669_1130398413300025937Miscanthus RhizosphereMSFLDRFRRKTEDESARIARLSKTGRMADGKILDAVSD
Ga0207691_1097151223300025940Miscanthus RhizosphereMSFLDRFRKKPEDEASRIERLSKTGRMADGRIIDAVSDNDGRITQVTY
Ga0207651_1018524033300025960Switchgrass RhizosphereMSFLDRFRKRTEDEASRIARLSKTGRMVDGKIIDAVSD
Ga0207651_1186391423300025960Switchgrass RhizosphereMSFLDRFRKKKEDEASRITRLSKTGRMADGRIIDA
Ga0207712_1150628013300025961Switchgrass RhizosphereMSFLDRFRKRTEDEASRIARLSKTGRMVDGKIIDAVSDNEGRILQVNYAYEI
Ga0207677_1134466813300026023Miscanthus RhizosphereMSFLDRFRKRPEDEASRIARLSKTGRMVDGKIIDAVSD
Ga0207703_1130599723300026035Switchgrass RhizosphereMSFLDRFRKKPEDEASRIARLSKTGRMADGQIIDAVSDNEGRISQVT
Ga0207641_1158725413300026088Switchgrass RhizosphereMSFLDRFRKKPEDEASRIARLSKTGRMADGRIIDAVSDNEGRISQVTYTY
Ga0207676_1093802913300026095Switchgrass RhizosphereMSFLDRFRKKREDEASRIARLSKTGRMADGRVIDAVSTNDGTIT
Ga0207676_1122523423300026095Switchgrass RhizosphereMSFLDRFRKRTEDEASRIARLSKTGRMVDAKIIDAVSDNDGRILQV
Ga0207675_10186875723300026118Switchgrass RhizosphereMSFLDRFRKRTEDEASRIARLSKTGRMVDGKIIDAVSDDA
Ga0208338_100004713300027514SoilMSFLDRFRKRTEDEASRIARLSKTGRMVDGKIIDAVYDN
Ga0209818_114053813300027637Agricultural SoilMSFLDRFRRKTEDEASRIARLAKTGRMTDGNIIDAVSDRDGKII
Ga0209485_102920913300027691Agricultural SoilMSFLDRFRRKTEDEASRIARLAKTGRMTDGNIIDAVSDRDGKI
Ga0209974_1042352323300027876Arabidopsis Thaliana RhizosphereMSFLDRFRRKTEDESARIARLSKTGRMADGKILDAVSDNDGRILQVTYAYTL
Ga0209481_1047675023300027880Populus RhizosphereMSFLDRFRKRTEDEASRIARLSKTGRMTDGNIIDAVSDNSGQ
Ga0268265_1232215623300028380Switchgrass RhizosphereMSFLDRFRKKPEDEASRIARLSRTGRMADGKILDAVSENDGR
Ga0268264_1013910313300028381Switchgrass RhizosphereMSFLDRFRRKTEDETTRIARLSRTGRMADGRILDAVSDNDGRILQV
Ga0268264_1098320413300028381Switchgrass RhizosphereMSFLDRFRKRTEDEASRIARLSKTGRMTDGNIIDAVSDNDG
Ga0268241_1007005123300030511SoilMSFLNRFRRKTEDEPSRIARLSKTGRITDGQIVDAVSNGDGK
Ga0310813_1113403523300031716SoilMSFLDRFRKKIEDEPSRIARLSKTGRMTDGNIIDAVSDRDGKITEV
Ga0310813_1183430623300031716SoilMSFLDRFRKKIEDEASRIARLSKTGRMTDGNIIDAVSDNDGRI
Ga0307410_1026689713300031852RhizosphereMSFLDRFREKTEDEASRIERLSKTGRMGDGRIIDAVSDNDGRITEVVYTY
Ga0310884_1108499313300031944SoilMSFLDRFRKKPEDEASRIERLSKTGRMADGRIIDAVSDNEGRITQ
Ga0310810_1017402313300033412SoilMSFLDRFRKKTEDEASRIARLSKTGRMTDGNIIDAVSDNEGRIT
Ga0310810_1121446623300033412SoilMSFLDRFRKKIEDEASRIERLSKTGRMADGRIIDAVSENDGRITQVT
Ga0334913_145971_392_5053300034172Sub-Biocrust SoilMSFLDRFRKKTEDEASRIARLSKTGRMADGRIIDAVSD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.