Metagenome / Metatranscriptome Family F081678

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081678
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	39 residues
Representative Sequence	TAYQERDWLLVGLKTNFLLDPLRSDPRFAELVRKVGLPQ
Number of Associated Samples	102
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.88 %
% of genes near scaffold ends (potentially truncated)	96.49 %
% of genes from short scaffolds (< 2000 bps)	92.98 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.982 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (13.158 % of family members)
Environment Ontology (ENVO)	Unclassified (21.053 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.895 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.34% β-sheet: 0.00% Coil/Unstructured: 68.66%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00069	Pkinase	12.28
PF00072	Response_reg	1.75
PF00196	GerE	1.75
PF01594	AI-2E_transport	1.75
PF13181	TPR_8	1.75
PF07690	MFS_1	1.75
PF00857	Isochorismatase	1.75
PF02620	YceD	0.88
PF00717	Peptidase_S24	0.88
PF13414	TPR_11	0.88
PF07676	PD40	0.88
PF14534	DUF4440	0.88
PF07702	UTRA	0.88
PF09286	Pro-kuma_activ	0.88
PF12681	Glyoxalase_2	0.88
PF13683	rve_3	0.88
PF13649	Methyltransf_25	0.88
PF00753	Lactamase_B	0.88
PF01548	DEDD_Tnp_IS110	0.88
PF00881	Nitroreductase	0.88
PF07730	HisKA_3	0.88
PF07883	Cupin_2	0.88
PF07366	SnoaL	0.88
PF12833	HTH_18	0.88
PF04237	YjbR	0.88
PF00155	Aminotran_1_2	0.88
PF10543	ORF6N	0.88
PF08238	Sel1	0.88
PF00478	IMPDH	0.88
PF13519	VWA_2	0.88
PF00149	Metallophos	0.88
PF00293	NUDIX	0.88
PF00775	Dioxygenase_C	0.88
PF13474	SnoaL_3	0.88
PF01734	Patatin	0.88
PF00589	Phage_integrase	0.88
PF07681	DoxX	0.88
PF00486	Trans_reg_C	0.88
PF03544	TonB_C	0.88
PF00557	Peptidase_M24	0.88
PF02371	Transposase_20	0.88
PF13360	PQQ_2	0.88
PF01431	Peptidase_M13	0.88
PF05163	DinB	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	49.12
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.75
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	1.75
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.75
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.75
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.88
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.88
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.88
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.88
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.88
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.88
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.88
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.88
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.88
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.88
COG1399	23S rRNA accumulation protein YceD (essential in plants, uncharacterized in bacteria)	Translation, ribosomal structure and biogenesis [J]	0.88
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.98 %
Unclassified	root	N/A	7.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.98 %
Unclassified	root	N/A	7.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.98 %
Unclassified	root	N/A	7.02 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	66.67 %
Unclassified	root	N/A	7.02 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.63 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	35.96 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.79 %
Unclassified	root	N/A	7.02 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.75 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.96 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	14.04 %
Unclassified	root	N/A	7.02 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.88 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.96 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14.04 %
Unclassified	root	N/A	7.02 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.88 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.96 %
Unclassified	root	N/A	7.02 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	1.75 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.88 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.88 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.88 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.96 %
Unclassified	root	N/A	7.02 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1.75 %
Sphingomonas lutea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas lutea	0.88 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	0.88 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.88 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.96 %
Unclassified	root	N/A	7.02 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1.75 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	0.88 %
Sphingomonas lutea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas lutea	0.88 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.88 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10220782	Not Available	764	Open in IMG/M
3300002245\|JGIcombinedJ26739_100024310	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5272	Open in IMG/M
3300002245\|JGIcombinedJ26739_100271187	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300004080\|Ga0062385_10290510	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	932	Open in IMG/M
3300004139\|Ga0058897_11009142	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300004633\|Ga0066395_10131568	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300005178\|Ga0066688_10611561	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	700	Open in IMG/M
3300005332\|Ga0066388_101862056	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300005436\|Ga0070713_101305591	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300005468\|Ga0070707_100517060	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1156	Open in IMG/M
3300005586\|Ga0066691_10354972	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	868	Open in IMG/M
3300005598\|Ga0066706_11038981	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	629	Open in IMG/M
3300005614\|Ga0068856_101238995	All Organisms → cellular organisms → Bacteria → Acidobacteria	762	Open in IMG/M
3300005841\|Ga0068863_101788462	Not Available	624	Open in IMG/M
3300005993\|Ga0080027_10477006	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300006028\|Ga0070717_10014943	All Organisms → cellular organisms → Bacteria	5979	Open in IMG/M
3300006031\|Ga0066651_10706499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300006052\|Ga0075029_100903318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300006059\|Ga0075017_100012932	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5322	Open in IMG/M
3300006173\|Ga0070716_100651379	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300006174\|Ga0075014_100059929	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1664	Open in IMG/M
3300006175\|Ga0070712_100044740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3054	Open in IMG/M
3300006176\|Ga0070765_100139602	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2149	Open in IMG/M
3300006791\|Ga0066653_10364961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300006800\|Ga0066660_11008915	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	668	Open in IMG/M
3300006854\|Ga0075425_100491798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1413	Open in IMG/M
3300007076\|Ga0075435_100001019	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17756	Open in IMG/M
3300009500\|Ga0116229_11641921	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300009545\|Ga0105237_11645914	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300009661\|Ga0105858_1283074	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	515	Open in IMG/M
3300010043\|Ga0126380_10150071	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300010048\|Ga0126373_11892641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300010339\|Ga0074046_10534497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300010366\|Ga0126379_13781707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300010379\|Ga0136449_100707371	All Organisms → cellular organisms → Bacteria → Acidobacteria	1688	Open in IMG/M
3300010868\|Ga0124844_1095649	All Organisms → cellular organisms → Bacteria → Acidobacteria	1125	Open in IMG/M
3300010868\|Ga0124844_1295340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300011269\|Ga0137392_11370725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300012198\|Ga0137364_10794206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300012205\|Ga0137362_11631336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300012210\|Ga0137378_10133431	All Organisms → cellular organisms → Bacteria	2296	Open in IMG/M
3300012357\|Ga0137384_10501651	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300012971\|Ga0126369_10912207	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	964	Open in IMG/M
3300013102\|Ga0157371_10698103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300014158\|Ga0181521_10279667	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	866	Open in IMG/M
3300014168\|Ga0181534_10107057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1404	Open in IMG/M
3300014499\|Ga0182012_10590642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300015374\|Ga0132255_105284212	Not Available	547	Open in IMG/M
3300016371\|Ga0182034_10268326	All Organisms → cellular organisms → Bacteria → Acidobacteria	1354	Open in IMG/M
3300016387\|Ga0182040_11855636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300017935\|Ga0187848_10314952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300017959\|Ga0187779_10078323	All Organisms → cellular organisms → Bacteria → Acidobacteria	1962	Open in IMG/M
3300017959\|Ga0187779_10606658	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300017959\|Ga0187779_11116707	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300017961\|Ga0187778_11139103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300017970\|Ga0187783_10300141	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300017972\|Ga0187781_10392569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	990	Open in IMG/M
3300017972\|Ga0187781_10999270	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300017974\|Ga0187777_10287021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1123	Open in IMG/M
3300017974\|Ga0187777_10821783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas lutea	665	Open in IMG/M
3300017975\|Ga0187782_10630974	All Organisms → cellular organisms → Bacteria → Acidobacteria	824	Open in IMG/M
3300017975\|Ga0187782_10917703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300018009\|Ga0187884_10063842	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1680	Open in IMG/M
3300018019\|Ga0187874_10458516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300018062\|Ga0187784_10603032	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300018062\|Ga0187784_11190187	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300018090\|Ga0187770_11211825	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300018090\|Ga0187770_11333020	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300020170\|Ga0179594_10359678	Not Available	552	Open in IMG/M
3300020579\|Ga0210407_10312157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1228	Open in IMG/M
3300020580\|Ga0210403_10173871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1765	Open in IMG/M
3300021170\|Ga0210400_10647751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300021401\|Ga0210393_10139154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1948	Open in IMG/M
3300021404\|Ga0210389_10157629	All Organisms → cellular organisms → Bacteria	1762	Open in IMG/M
3300021406\|Ga0210386_11414173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300021432\|Ga0210384_11288786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300021477\|Ga0210398_10285771	Not Available	1345	Open in IMG/M
3300026041\|Ga0207639_10740070	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300026078\|Ga0207702_11173621	All Organisms → cellular organisms → Bacteria → Acidobacteria	762	Open in IMG/M
3300026215\|Ga0209849_1017135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1207	Open in IMG/M
3300026297\|Ga0209237_1278667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300026317\|Ga0209154_1223041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300026467\|Ga0257154_1033340	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300026490\|Ga0257153_1003333	All Organisms → cellular organisms → Bacteria	3106	Open in IMG/M
3300026529\|Ga0209806_1122554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300026547\|Ga0209156_10211157	Not Available	921	Open in IMG/M
3300026698\|Ga0208843_100618	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	631	Open in IMG/M
3300027095\|Ga0208606_107443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300027535\|Ga0209734_1013123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1502	Open in IMG/M
3300027842\|Ga0209580_10514896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300027862\|Ga0209701_10698108	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300027879\|Ga0209169_10062803	All Organisms → cellular organisms → Bacteria → Acidobacteria	1922	Open in IMG/M
3300027879\|Ga0209169_10064833	All Organisms → cellular organisms → Bacteria	1889	Open in IMG/M
3300029903\|Ga0247271_132364	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	510	Open in IMG/M
3300029913\|Ga0311362_10551300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1047	Open in IMG/M
3300029943\|Ga0311340_11292096	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300030044\|Ga0302281_10411170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300030057\|Ga0302176_10357782	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300031232\|Ga0302323_101800636	Not Available	693	Open in IMG/M
3300031754\|Ga0307475_10510341	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300031754\|Ga0307475_10894363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300031833\|Ga0310917_10833230	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300031941\|Ga0310912_10325755	All Organisms → cellular organisms → Bacteria → Acidobacteria	1191	Open in IMG/M
3300031941\|Ga0310912_10716541	All Organisms → cellular organisms → Bacteria → Acidobacteria	775	Open in IMG/M
3300031954\|Ga0306926_11692587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300031962\|Ga0307479_11400050	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300032205\|Ga0307472_100352460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300032261\|Ga0306920_102346839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300032770\|Ga0335085_11007161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300032782\|Ga0335082_10405118	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300032783\|Ga0335079_11473915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300032895\|Ga0335074_10384889	Not Available	1534	Open in IMG/M
3300032898\|Ga0335072_10505290	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300033004\|Ga0335084_10302797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1652	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.23%
Host-Associated	Host-Associated	8.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.33%
Plants	Host-Associated → Plants	8.77%
Aquatic	Environmental → Aquatic	7.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.95%
Freshwater	Environmental → Aquatic → Freshwater	5.26%
Peat	Environmental → Terrestrial → Peat	4.39%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.51%
Sediment	Environmental → Aquatic → Sediment	2.63%
Peat Moss	Host-Associated → Plants → Peat Moss	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.47%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	22.81%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.26%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.39%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	19.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	13.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.14%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.51%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.51%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.51%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.63%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.75%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.75%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.75%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.88%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.88%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.88%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.88%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.88%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.88%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026698	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN411 (SPAdes)	Environmental	Open in IMG/M
3300027095	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF020 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300029903	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_102207821	3300001867	Forest Soil	RDFNLISLKTDFLLNPLRSDPRFAELVSKVGLPQ*
JGIcombinedJ26739_1000243101	3300002245	Forest Soil	YEERDYQVESLRTDFRLDLMRSDPRFAELVRKVGLPQ*
JGIcombinedJ26739_1002711871	3300002245	Forest Soil	REHDWLLMALNTEFQLDPVRSDPRFAELVCKVGLPQ*
Ga0062385_102905101	3300004080	Bog Forest Soil	WLNTAFQEHDIGLMGLKTDFMLDSLRYDPRLAELVRKVGLPQ*
Ga0058897_110091422	3300004139	Forest Soil	DTAYQERDAGLLGLKTDYLLDSLRSDTRFPELVHNVGLPQ*
Ga0066395_101315682	3300004633	Tropical Forest Soil	LDAAFEDRDIGLMRLKTDFLLDRLRSDPRFPELVRKVGLSQ*
Ga0066688_106115611	3300005178	Soil	KAYQARDYRMTQLNVRNDLDSLRSDPRFTELVRKVGLPQ*
Ga0066388_1018620561	3300005332	Tropical Forest Soil	WLNTAYQERDSLSLLGLKTDFLLDPLRSDPRFAELVRKVGLPQ*
Ga0070713_1013055912	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	DTAYQERDLYLLGLKVDFQFDPLRSDPPFAELVRKVGLPQ*
Ga0070707_1005170603	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	NTAYNERDKWLEGLKTDFVLDPIRSDPRFLELVRNVGLPQ*
Ga0066691_103549722	3300005586	Soil	QERYAQLPNLETDFLLDPIRSDPRLAELVRKVGLPQ*
Ga0066706_110389811	3300005598	Soil	LNTAYDERDGRLVGLKTDFRLNRLHSDPRFAELVRKVGLPQ*
Ga0068856_1012389951	3300005614	Corn Rhizosphere	TAYQERDWLLVSLKTNFLLDPLRSDPRFAELVRKVGLPQ*
Ga0068863_1017884621	3300005841	Switchgrass Rhizosphere	YQEHDIGLIRLKTDFLLDPLRHDPRFAVMIRKVGLPE*
Ga0080027_104770061	3300005993	Prmafrost Soil	LLIERELGLRGLRTDFLLVRSDPRFAELVGKMGLPH*
Ga0070717_100149435	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MWFQTAYQERDRLLLDLKTDCGLDLVRSDPRFAELVRKVGLPQ*
Ga0066651_107064991	3300006031	Soil	ERDIGLLRLKTDFRLDSLRSDPRLAGLVRKVGLPH*
Ga0075029_1009033182	3300006052	Watersheds	IETAYRERDGIGLIDLKTDFLLDPIRSDSRFAEWMKKIGFPQ*
Ga0075017_1000129321	3300006059	Watersheds	NTAYKERDGWLVGLKTDFSLDPIRSDPRFAELVRKVGLPQ*
Ga0070716_1006513791	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	WLDTARQERDYLLLGLKTDFSLDTIRSDPRFAELVRKVGLPQ*
Ga0075014_1000599294	3300006174	Watersheds	AYKERDGWLVGLKTDFSLDPIRSDPRFAELVRKVGLPQ*
Ga0070712_1000447401	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TAYQERDWLLVGLKTNFLLDPLRSDPRFAELVRKVGLPQ*
Ga0070765_1001396021	3300006176	Soil	EERDYQMESLRTDFRLDPVRSDPRFAELVRKVGLPQ*
Ga0066653_103649612	3300006791	Soil	YQERDIGLLRLKTDFRLDSLRSDPRLAGLVRKVGLPH*
Ga0066660_110089151	3300006800	Soil	NTAYQERDWLLVGLKTNFLLDPIRSDPRFAELVRKVGLPQ*
Ga0075425_1004917981	3300006854	Populus Rhizosphere	RDLGLLSLKTDFLLDPLRPDPRLAEVVRKVGLPSW*
Ga0075435_1000010191	3300007076	Populus Rhizosphere	SRGLTRHTQEHDQGLIALRTDYTLDSLRSDPRYTELVRKVGLPQ*
Ga0116229_116419212	3300009500	Host-Associated	LDTAHQERDWLLTALKTDFLLDPLHSDPRFEQLARKIGLPGGK*
Ga0105237_116459141	3300009545	Corn Rhizosphere	NTAYQERDWLLIGLKTDFLLDPIRSDPRFAELVRKVGLPQ*
Ga0105858_12830741	3300009661	Permafrost Soil	RDLSLEGLKTDFLLDPLRSDPRFAELVRKVGLPQ*
Ga0126380_101500712	3300010043	Tropical Forest Soil	AYQERGICLVGLKTNFLLDPIRSDPRFAELARKVGLPQ*
Ga0126373_118926411	3300010048	Tropical Forest Soil	RDNHLEALKTDFLLDPLRSDIRFAELVRKVGLPQ*
Ga0074046_105344971	3300010339	Bog Forest Soil	HDEELMGLKTDYSLDPVRSDPRFAELVRKVGLPQ*
Ga0126379_137817071	3300010366	Tropical Forest Soil	AYQERDQGLLSLKTDLLLDPLRSDPRFAELVRKIRLPQ*
Ga0136449_1007073715	3300010379	Peatlands Soil	WLNTAYQERDNRLEGLKTDFLLDPLRSDIRFAELVRKVGLPQ*
Ga0124844_10956491	3300010868	Tropical Forest Soil	ERDQQMSDLETDFFFDFDTIRSDPRFAELVRKVGLPQ*
Ga0124844_12953402	3300010868	Tropical Forest Soil	RDQQMSDLETDFFFDTIRSDPRFAELVRKVGLPQ*
Ga0137392_113707251	3300011269	Vadose Zone Soil	QERDFNLIGLKNDFLLDPLRSDPRFAELVRKVGLPQ*
Ga0137364_107942061	3300012198	Vadose Zone Soil	YQERDAQLPNLETDFLLDPIRSDPRLAELVRKVGLPQ*
Ga0137362_116313361	3300012205	Vadose Zone Soil	YQEHDWLLGDLKTNLLLDPIRSDPRFAELVRKVGLQQ*
Ga0137378_101334311	3300012210	Vadose Zone Soil	KWLDTAYQERDVGLEFLKTDFLLDPLRADSRFAELVSKVGLPQ*
Ga0137384_105016511	3300012357	Vadose Zone Soil	KEHDWLLEGLKTDFLFDPIRSDPRFAELVRKVGLPQ*
Ga0126369_109122071	3300012971	Tropical Forest Soil	QERDSLSLLGLKTDFLLDPLRSDPRFAELVRKVGLPQ*
Ga0157371_106981032	3300013102	Corn Rhizosphere	WLNTAYQERDWLLIGLKTDFLLDPIRSDPRFAELVRKVALPQ*
Ga0181521_102796671	3300014158	Bog	WLDTAYREHDFLLKELNTAFEVDSLRSDPRFAELVNTVGLPKLR*
Ga0181534_101070572	3300014168	Bog	DGPHQIESLRTDFRLDPVRSDPRFAELVRKVGLPQ*
Ga0182012_105906422	3300014499	Bog	DIAYREHDWTLIGLNSYFQFDPLRSDPRFAELVKKIGLPQISR*
Ga0132255_1052842121	3300015374	Arabidopsis Rhizosphere	AYRERDALLEGLNTDFLLDPLRSDLRFIDLVHKVGLP*
Ga0182034_102683262	3300016371	Soil	YQEHDWQLEGLNSDFYIDPLRSDPRFAELVRKVGLPQ
Ga0182040_118556361	3300016387	Soil	IAYQDRDSALVGLKTDFALDPIRSDPRFAELVRKVGLPQ
Ga0187848_103149522	3300017935	Peatland	YQEHDWLLIGLKTFVPFDPLRSDPRYAAMVRKVGLP
Ga0187779_100783233	3300017959	Tropical Peatland	LNTAYQEHDGQLEGSKTDFLVDPLRSDPRFAELVRKVGLPQ
Ga0187779_106066581	3300017959	Tropical Peatland	FQEREIGMMGLRTDFLLDSLATDPRFAELVRKVGLPQ
Ga0187779_111167071	3300017959	Tropical Peatland	LNTAYQEHDWLLLSLKNNSELEAVRSDPRFAELVRQVGLPE
Ga0187778_111391033	3300017961	Tropical Peatland	ERDWLLVDLKTDFLVDPLRSDPRFAELVRKVGLPQ
Ga0187783_103001413	3300017970	Tropical Peatland	WLNTAFQEHDWWLFGLKTDFALDPIRADPRFAELVRKVGLPQ
Ga0187781_103925692	3300017972	Tropical Peatland	LNTALQEHDWWLIRLKTDFALDPIRSDLRFAELVRKVGLPQ
Ga0187781_109992702	3300017972	Tropical Peatland	YQEHDMGLISLKIDYSLDSLRSDPRFAELVRKVGLP
Ga0187777_102870211	3300017974	Tropical Peatland	EHDEYLMGLKTDFLLDPLRSDPRFAELVRKMGLPQ
Ga0187777_108217832	3300017974	Tropical Peatland	RDPGLIGLRTDFLLDPLRSDPRYVDLVRKMNFPSPAK
Ga0187782_106309742	3300017975	Tropical Peatland	DWLLEGLNTLSQFDSLRADPRFGELVNKVGLPKLPR
Ga0187782_109177031	3300017975	Tropical Peatland	YQERDFFLLGLRTDFALDPLRSDPRFPELIRKVGLPQ
Ga0187884_100638423	3300018009	Peatland	FRWLNIAYQEHDWLLIGLKTFIPLAPLRSDPRFAELVHKVGLPQ
Ga0187874_104585161	3300018019	Peatland	TAYREHDWLLPGLNTYFQLDPLRSDPRFAELVHKVGLPQ
Ga0187784_106030321	3300018062	Tropical Peatland	FMWLNTAFQEHDWWLLGLKTDFALDPIRADPRFAELVRKVGLLP
Ga0187784_111901872	3300018062	Tropical Peatland	QEHDISLMDLKTDYTLDSLRSDPRFAELVRKVGLPQ
Ga0187770_112118252	3300018090	Tropical Peatland	AYREHDWLLKELNTAYQVDSLRSDPRFAELVKKVGLPKVR
Ga0187770_113330201	3300018090	Tropical Peatland	VEHDRLLIGLNTYFQLDPVRSDPRFAELVRKVGLPP
Ga0179594_103596781	3300020170	Vadose Zone Soil	AYQEHDTELIGLRTDFRFDSLRSDWRYIELVRKVGLPRS
Ga0210407_103121571	3300020579	Soil	YQEHDWLLMGLNTYFQLDPLRSDPRFTELVRKVGLPQ
Ga0210403_101738711	3300020580	Soil	NAAYEERDYQIESLKTDFRLDSVRSDPRFVELVRKVGLPQ
Ga0210400_106477511	3300021170	Soil	TAAYEERDYQMESLRTDFRLDPVRSDPRFAELVRKVGLPQS
Ga0210393_101391543	3300021401	Soil	DTAYQEHDWLLMGLNTYFQLDPLRSDPRFTELVRKVGLPQ
Ga0210389_101576291	3300021404	Soil	MAYQERESGMKMLKTDYLLDPLRSDPRFPELLRKVGLPQ
Ga0210386_114141732	3300021406	Soil	DTAYREHDWLLIGLNTYFQLDPIRSDPRFAELVRKVGLPH
Ga0210384_112887862	3300021432	Soil	YRERDLLLLGVKTDDSLDPIRSDPRFAELVRKVGLPL
Ga0210398_102857711	3300021477	Soil	NLAYQEHDWLLITLNTHYALDPLRSDPRFAELVRKVGLPQ
Ga0207639_107400701	3300026041	Corn Rhizosphere	RGWEIRDSGLLNLKTDVLLDPLRSDGRFAALLAKVGFPA
Ga0207702_111736211	3300026078	Corn Rhizosphere	TAYQERDWLLVSLKTNFLLDPLRSDPRFAELVRKVGLPQ
Ga0209849_10171351	3300026215	Soil	ERDFFLFGLKADFLLDQLHSDPRFAELVRKVGLPQ
Ga0209237_12786671	3300026297	Grasslands Soil	NTAYQERGAFMLGLKTDFLLDPLHSDPRFDELVRKVGLPI
Ga0209154_12230412	3300026317	Soil	KAYQGRDYQMTELNVRPELDSLRSDPRLAELARRVGLPQ
Ga0257154_10333402	3300026467	Soil	YREHDWLLEGLNTYAQLDSLRSDPRFAALVSKVGLPK
Ga0257153_10033332	3300026490	Soil	MRFETAYQERDRLLTDLKTDYGLDLVRSDPRFAELARKVGLPQ
Ga0209806_11225544	3300026529	Soil	QERDFNLIGLKTDFLLDPLRSDPRFAELVRKVGLPQ
Ga0209156_102111571	3300026547	Soil	ERDIGLLRLKTDFRLDSLRSDPRLAGLVRNVGLPH
Ga0208843_1006182	3300026698	Soil	RWLNTACQERDSSLEGLKTDFLLDPLRSDRRFAELVRKVGLPQ
Ga0208606_1074431	3300027095	Forest Soil	AYQEHDLGLLSLKTDFLLDPLRSDPRLAELVKKVGLP
Ga0209734_10131231	3300027535	Forest Soil	NTAYYERDRLMLGLKADFPLDSLRSDPRFAELVRKVGLPQ
Ga0209580_105148962	3300027842	Surface Soil	RWLDVAYHERDREMIGLITDVQLESLRSDPRFAELVRKVGLPQ
Ga0209701_106981082	3300027862	Vadose Zone Soil	YQERDANCTLIKNDFAMDRLRSDPRFAELVRKVGLPQKRKQFGLET
Ga0209169_100628032	3300027879	Soil	DTAYREHDWLLMALNTEFQLDPVRSDPRFAELVRKVGLPQ
Ga0209169_100648331	3300027879	Soil	DTAYREHDWLLMALNTEFQLDPVRSDPRFAELVCKVGLPQ
Ga0247271_1323642	3300029903	Soil	AYREHDWLLIGLKTFIPLAPLRSDPRFAELVRKVGLPQ
Ga0311362_105513002	3300029913	Bog	IAYQQHDWLLIGLNTYFQLDPLRSDPRFAELVRKVGLPQ
Ga0311340_112920961	3300029943	Palsa	WLDTAYREHDFLLNGIRTEFQFDVLRSDPRFAELVSKVGLPKVQ
Ga0302281_104111702	3300030044	Fen	HDWTLIGLNSYFQFDPLRSDPRFAELVKKIGLPQISR
Ga0302176_103577821	3300030057	Palsa	QEHDWLLIGLKTFIPFAPLRSDPRFAELAHKIGLPD
Ga0302323_1018006362	3300031232	Fen	AYQEREWQMTSLKTDFLLDPLRSDSRLNQLVRKMGLPE
Ga0307475_105103411	3300031754	Hardwood Forest Soil	NIAYQERDWWMENLKTDFLLDPIRSDPRFSELVRKVGLPQ
Ga0307475_108943632	3300031754	Hardwood Forest Soil	VQMWFETAYQERDRLLTDLKTDYGLDVVRSDPRYAELVRKVGLPQ
Ga0310917_108332302	3300031833	Soil	TAYQERDFWLLGLKTDYSLDPIRSDPRFAELVRKVGLPQ
Ga0310912_103257551	3300031941	Soil	ERDYPLTGLNTDFLLDSLRSDPRFAELARKVGLPL
Ga0310912_107165411	3300031941	Soil	EHDLGLLSLNTDFLLDSLRADPRMSKLVRKVGLPQ
Ga0306926_116925872	3300031954	Soil	AYSDRDIGLIRLKTDFLLDPLRSDPRLLELARKVGLSH
Ga0307479_114000502	3300031962	Hardwood Forest Soil	MWFETAYQERDRLLTDLKTDYGLDVVRSDPRYAELVRKVGLPQ
Ga0307472_1003524603	3300032205	Hardwood Forest Soil	HAFEWLNVAYQERDDNLINLKTQFTLDSLRPDPRFAEMVRKVGLPQ
Ga0306920_1023468392	3300032261	Soil	ALQEHDQGLIGLKTDYTLDSIRSDPRFAELVRKVGLPQ
Ga0335085_110071611	3300032770	Soil	RAGFPVARHAYQERDWLLEGLDTDFVLDPLRSDSRFAELVRKVGLPQ
Ga0335082_104051181	3300032782	Soil	QWLNTAYQERDWLLMGLKTDFLVDPLRSDARFAELVRKVGLPQ
Ga0335079_114739153	3300032783	Soil	QEHDEGLEGLKTDFSLDPLRSDPRFAELVRKVGLPQ
Ga0335074_103848892	3300032895	Soil	MGTAYRLHDSLYQLNTDFMLDPLRSDPRFATLAKKVGLPQ
Ga0335072_105052904	3300032898	Soil	NTAYQEKDWLLTSLKTDYLLDPLRSDPRFEELVRKIGLP
Ga0335084_103027973	3300033004	Soil	ERDGKVAGLRVDFLLDPLHSDPHFAELVRKVGLPQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081678

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences