Metagenome Family F081677

Basic Information
Family ID	F081677
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	79 residues
Representative Sequence	MATRKDDDIDYTAEGATPPHEKDDATNAGYDEAAHHGPGRYGVPEGEGGVFGTTGGGTYKGGMHVEERPVVEAEREDDEK
Number of Associated Samples	106
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	27.93 %
% of genes near scaffold ends (potentially truncated)	15.79 %
% of genes from short scaffolds (< 2000 bps)	69.30 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.12

Most Common Taxonomy
Group	Bacteria (97.368 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.158 % of family members)
Environment Ontology (ENVO)	Unclassified (35.088 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (36.842 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.33% β-sheet: 0.00% Coil/Unstructured: 91.67%
Feature Viewer

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Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00270	DEAD	14.91
PF04239	DUF421	5.26
PF13245	AAA_19	4.39
PF01145	Band_7	3.51
PF08482	HrpB_C	3.51
PF00271	Helicase_C	3.51
PF13432	TPR_16	2.63
PF00392	GntR	2.63
PF06778	Chlor_dismutase	1.75
PF01503	PRA-PH	1.75
PF12706	Lactamase_B_2	1.75
PF08334	T2SSG	0.88
PF00263	Secretin	0.88
PF14759	Reductase_C	0.88
PF07963	N_methyl	0.88
PF13442	Cytochrome_CBB3	0.88
PF13676	TIR_2	0.88
PF00990	GGDEF	0.88
PF13181	TPR_8	0.88
PF05221	AdoHcyase	0.88
PF03486	HI0933_like	0.88
PF05163	DinB	0.88
PF14559	TPR_19	0.88
PF07992	Pyr_redox_2	0.88
PF01738	DLH	0.88
PF02618	YceG	0.88
PF08310	LGFP	0.88
PF00383	dCMP_cyt_deam_1	0.88
PF13564	DoxX_2	0.88
PF14332	DUF4388	0.88
PF01925	TauE	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG2323	Uncharacterized membrane protein YcaP, DUF421 family	Function unknown [S]	5.26
COG1643	HrpA-like RNA helicase	Translation, ribosomal structure and biogenesis [J]	3.51
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	1.75
COG3253	Coproheme decarboxylase/chlorite dismutase	Coenzyme transport and metabolism [H]	1.75
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.75
COG1559	Endolytic transglycosylase MltG, terminates peptidoglycan polymerization	Cell wall/membrane/envelope biogenesis [M]	0.88
COG5479	LGFP repeat-containing protein, may be involved in cell wall binding	Cell wall/membrane/envelope biogenesis [M]	0.88
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	0.88
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	0.88
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	0.88
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.88
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	0.88
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	0.88
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	0.88
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.88
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.88
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	0.88
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.37 %
Unclassified	root	N/A	2.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.37 %
Unclassified	root	N/A	2.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.37 %
Unclassified	root	N/A	2.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	50.00 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.63 %
Unclassified	root	N/A	2.63 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	46.49 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.63 %
Unclassified	root	N/A	2.63 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.49 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2.63 %
Unclassified	root	N/A	2.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.49 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	2.63 %
Unclassified	root	N/A	2.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.49 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	2.63 %
Unclassified	root	N/A	2.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.49 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	2.63 %
Unclassified	root	N/A	2.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.49 %
Singulisphaera acidiphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	2.63 %
Unclassified	root	N/A	2.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig33675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1179	Open in IMG/M
3300000956\|JGI10216J12902_103496359	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300002568\|C688J35102_120957829	All Organisms → cellular organisms → Bacteria	3109	Open in IMG/M
3300003990\|Ga0055455_10157439	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300004081\|Ga0063454_100012544	All Organisms → cellular organisms → Bacteria	2362	Open in IMG/M
3300004081\|Ga0063454_100883305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300004153\|Ga0063455_100079579	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	1263	Open in IMG/M
3300004463\|Ga0063356_104073322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300005167\|Ga0066672_10726520	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300005184\|Ga0066671_10237156	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300005334\|Ga0068869_100219352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1507	Open in IMG/M
3300005336\|Ga0070680_100096001	All Organisms → cellular organisms → Bacteria	2458	Open in IMG/M
3300005337\|Ga0070682_100000006	All Organisms → cellular organisms → Bacteria	369078	Open in IMG/M
3300005354\|Ga0070675_100000016	All Organisms → cellular organisms → Bacteria	199687	Open in IMG/M
3300005454\|Ga0066687_10590041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	660	Open in IMG/M
3300005468\|Ga0070707_100135344	All Organisms → cellular organisms → Bacteria	2397	Open in IMG/M
3300005518\|Ga0070699_100837751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300005529\|Ga0070741_10051634	All Organisms → cellular organisms → Bacteria	4978	Open in IMG/M
3300005536\|Ga0070697_100686303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300005539\|Ga0068853_100357607	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300005577\|Ga0068857_100110609	All Organisms → cellular organisms → Bacteria	2469	Open in IMG/M
3300005577\|Ga0068857_100678577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300005719\|Ga0068861_100238342	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300006032\|Ga0066696_10685535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300006173\|Ga0070716_100711003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300006755\|Ga0079222_12254014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300006876\|Ga0079217_10099523	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300006914\|Ga0075436_100417768	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300007004\|Ga0079218_11402427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300007004\|Ga0079218_12654122	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300007004\|Ga0079218_13454230	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300009036\|Ga0105244_10362448	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300009087\|Ga0105107_10858919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300009094\|Ga0111539_10000028	All Organisms → cellular organisms → Bacteria	185193	Open in IMG/M
3300009147\|Ga0114129_10447057	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300010044\|Ga0126310_11611188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300010045\|Ga0126311_11892891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300010400\|Ga0134122_12682239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300010403\|Ga0134123_10000625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23318	Open in IMG/M
3300010403\|Ga0134123_13377995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300011271\|Ga0137393_10003198	All Organisms → cellular organisms → Bacteria	10621	Open in IMG/M
3300011419\|Ga0137446_1003130	All Organisms → cellular organisms → Bacteria	2669	Open in IMG/M
3300011419\|Ga0137446_1145931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300011427\|Ga0137448_1011912	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300011433\|Ga0137443_1006645	All Organisms → cellular organisms → Bacteria	2670	Open in IMG/M
3300012096\|Ga0137389_10185147	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300012210\|Ga0137378_10186637	All Organisms → cellular organisms → Bacteria	1929	Open in IMG/M
3300012350\|Ga0137372_10590058	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300012356\|Ga0137371_11056649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300012469\|Ga0150984_120814800	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	634	Open in IMG/M
3300012955\|Ga0164298_10457689	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300012986\|Ga0164304_10764225	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300014314\|Ga0075316_1134330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300014745\|Ga0157377_10000125	All Organisms → cellular organisms → Bacteria	49824	Open in IMG/M
3300015076\|Ga0167656_1004226	All Organisms → cellular organisms → Bacteria → Acidobacteria	1786	Open in IMG/M
3300015083\|Ga0167624_1002378	All Organisms → cellular organisms → Bacteria	3443	Open in IMG/M
3300015356\|Ga0134073_10348758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300018059\|Ga0184615_10457848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300018084\|Ga0184629_10645690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300018429\|Ga0190272_10000004	All Organisms → cellular organisms → Bacteria	231580	Open in IMG/M
3300018432\|Ga0190275_12009885	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300018466\|Ga0190268_10192749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1101	Open in IMG/M
3300018468\|Ga0066662_11237851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300018469\|Ga0190270_10000060	All Organisms → cellular organisms → Bacteria	52464	Open in IMG/M
3300018476\|Ga0190274_12257272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300019767\|Ga0190267_10251062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876	Open in IMG/M
3300020146\|Ga0196977_1000058	All Organisms → cellular organisms → Bacteria	79468	Open in IMG/M
3300020147\|Ga0196976_1053371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300021090\|Ga0210377_10000143	All Organisms → cellular organisms → Bacteria	66752	Open in IMG/M
3300021339\|Ga0193706_1001433	All Organisms → cellular organisms → Bacteria → Proteobacteria	10658	Open in IMG/M
3300021377\|Ga0213874_10291139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300021384\|Ga0213876_10147426	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300021968\|Ga0193698_1003568	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300022891\|Ga0247770_1222939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300024426\|Ga0196960_10023104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1628	Open in IMG/M
3300025913\|Ga0207695_10004547	All Organisms → cellular organisms → Bacteria	18870	Open in IMG/M
3300025917\|Ga0207660_10081036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2385	Open in IMG/M
3300025922\|Ga0207646_10114914	All Organisms → cellular organisms → Bacteria	2417	Open in IMG/M
3300025926\|Ga0207659_10000011	All Organisms → cellular organisms → Bacteria	275661	Open in IMG/M
3300025939\|Ga0207665_10651394	All Organisms → cellular organisms → Bacteria → Acidobacteria	826	Open in IMG/M
3300026075\|Ga0207708_11336415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300026116\|Ga0207674_10127970	All Organisms → cellular organisms → Bacteria	2504	Open in IMG/M
3300026116\|Ga0207674_11084488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300026118\|Ga0207675_100024296	All Organisms → cellular organisms → Bacteria → Acidobacteria	5636	Open in IMG/M
3300026312\|Ga0209153_1267838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300026557\|Ga0179587_10563538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300027637\|Ga0209818_1206815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300027886\|Ga0209486_10843578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300027907\|Ga0207428_10000028	All Organisms → cellular organisms → Bacteria	242204	Open in IMG/M
3300027992\|Ga0247750_1011242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300028707\|Ga0307291_1067494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300028714\|Ga0307309_10171372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300028722\|Ga0307319_10311328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300028744\|Ga0307318_10063813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1226	Open in IMG/M
3300030510\|Ga0268243_1154415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300031164\|Ga0307502_10023207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1063	Open in IMG/M
3300031548\|Ga0307408_100664680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300031824\|Ga0307413_10312514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1197	Open in IMG/M
3300031852\|Ga0307410_11530131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300031962\|Ga0307479_10999344	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	806	Open in IMG/M
3300032002\|Ga0307416_102770942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300032174\|Ga0307470_10000887	All Organisms → cellular organisms → Bacteria	12462	Open in IMG/M
3300032174\|Ga0307470_11162563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300032205\|Ga0307472_101645474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300032770\|Ga0335085_11639111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300034027\|Ga0334949_010727	All Organisms → cellular organisms → Bacteria	2900	Open in IMG/M
3300034134\|Ga0334928_122219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300034145\|Ga0334963_000097	All Organisms → cellular organisms → Bacteria	60359	Open in IMG/M
3300034194\|Ga0370499_0079044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300034760\|Ga0334948_002926	All Organisms → cellular organisms → Bacteria → Acidobacteria	5662	Open in IMG/M
3300034781\|Ga0334935_005020	All Organisms → cellular organisms → Bacteria	3653	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.07%
Host-Associated	Host-Associated	21.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.18%
Plants	Host-Associated → Plants	21.93%
Aquatic	Environmental → Aquatic	7.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.28%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.89%
Sediment	Environmental → Aquatic → Sediment	5.26%
Freshwater	Environmental → Aquatic → Freshwater	1.75%
Roots	Host-Associated → Plants → Roots	1.75%
Marine	Environmental → Aquatic → Marine	0.88%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.12%
Loam	Environmental → Terrestrial → Soil → Loam	12.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.63%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	2.63%
Sand	Environmental → Terrestrial → Soil → Sand	2.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.75%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.75%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.88%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.02%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.51%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.51%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.63%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	2.63%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	2.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.75%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.75%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.39%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.51%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.51%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.51%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.51%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.63%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.63%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.63%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	2.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.75%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.75%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.75%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.75%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.88%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.88%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.88%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.88%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.88%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.88%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.88%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.88%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014314	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015076	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6a, vegetation/snow interface)	Environmental	Open in IMG/M
3300015083	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1C, Ice margin)	Environmental	Open in IMG/M
3300015162	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4c, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300020147	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5-13C	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300022891	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L136-409B-6	Environmental	Open in IMG/M
3300024426	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027992	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S125-311R-5	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300034027	Biocrust microbial communities from Mojave Desert, California, United States - 45SNC	Environmental	Open in IMG/M
3300034134	Biocrust microbial communities from Mojave Desert, California, United States - 24HNC	Environmental	Open in IMG/M
3300034145	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 59SNS	Environmental	Open in IMG/M
3300034194	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_17	Environmental	Open in IMG/M
3300034760	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 44SMS	Environmental	Open in IMG/M
3300034781	Biocrust microbial communities from Mojave Desert, California, United States - 31SMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_02817460	2124908032	Soil	MADKRRNKDAIDYEVDGSTPPHEKEDPTNVGYDEAAHSGPSRYGVLEGEGGVFGTTGGGTPEIGFHVEEASVIDEKGQKKPV
JGI10216J12902_1034963594	3300000956	Soil	MATRKNDDEIDYTAEGKTPPREKNDPTNEGYDEAAHSGPSRYGVPEGSGGVFGTSGGGTYEGGMHVEERPVVDETERSE*
C688J35102_1209578292	3300002568	Soil	MATNRRTDSDIDYTPEGATPTQEKDDPTNRGYDEAAHSGKGEYGVQEGNGGVFGTTGGGTYSEGMHVVERPVIEGTEKGEDEV*
Ga0055455_101574392	3300003990	Natural And Restored Wetlands	ATDDELDYDAEGASPPHEKDDPTAPGYDEAVHRGPGEYGIPEGRGGVFGTTGGGTYKGGMHPVERPVIETERGEDEPGGAKD*
Ga0063454_1000125441	3300004081	Soil	SIGSGACTCLCIMATNRRTDSDIDYTPEGATPTQEKDDPTNRGYDEAAHSGKGEYGVQEGNGGVFGTTGGGTYSEGMHVVERPVIEGTEKGEDEV*
Ga0063454_1008833051	3300004081	Soil	MATKRNDDDGIDYTVEGASPTQEKDDPTNAGYDDAAHSGPGRYGVPEGQGGVFGTTGGGSYDRGMHIEERPAIETEKGKDET*
Ga0063455_1000795792	3300004153	Soil	MATKRNDDDIDYTAEGSTPPQEKNNPTDAGYDQAAHRGGAYGVKEGEGGVFGTTGGGTYRDGLHEEDRPAVDTEGE*
Ga0063356_1040733221	3300004463	Arabidopsis Thaliana Rhizosphere	MADQKTDDIDYMPEGSTPPHEKEDPTNVGYDEAAHSGPSRYGVLEGEGGVFGTTGGGTSGKGMHIEERPLVYEKKKD*
Ga0066672_107265202	3300005167	Soil	MAKDDDIDYTAEGATPPNEKNDPTDAGYDEAAHSGPGAYGVPEGRGGVFGTTGGGTYREGMHVVERPAIESERGPDEAGPSRGAEEE*
Ga0066671_102371562	3300005184	Soil	MAKDDDIDYTAEGANPPNEKDDPTNAGYDEAAHNGPGAYGVPEGRGGVFGTTGGGTYREGMHVVERPALESERGPDEPGPPRGADEA*
Ga0068869_1002193522	3300005334	Miscanthus Rhizosphere	MANDDNDIDYTAEGATPPHEKDDPTNEGYDEAAHRGPGAYGKLEGQGGVFGTTGGGTDDRGMHEVERPAIEGTERGPDEH*
Ga0070680_1000960012	3300005336	Corn Rhizosphere	MATSKRDDEIDYTAEGRTPPHEKDDPTNEGYDEAVKNGEGVYGVLEGQGGVFGTTGGGTYGRGMHVEERPALTTERGKDEPVE*
Ga0070682_10000000652	3300005337	Corn Rhizosphere	MATNRRSDSDIDYTPEGATPPEEKHDPTDRGYDEAVQSGPGEFGVAEGNGGVFGTTGGGTYSDGMHVVEDEK*
Ga0070675_100000016158	3300005354	Miscanthus Rhizosphere	MATEDDNIDYAAEGRTPPHEKDDATNEGYDEAVRSGEGRYGVPEGEGGVFGTTGGGTYGEGMHEEERPVVTTERGEDE*
Ga0066687_105900411	3300005454	Soil	EGANPPNEKDDPTNAGYDEAAHNGPGAYGVPEGRGGVFGTTGGGTYREGMHVVERPALESERGPDEPGPPRGADEA*
Ga0070707_1001353443	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MANDDEIDYAMEGDSPLREKDDPTNDGYDEAAHKGAAYGKLEGDGGVFGTTGGGTYNRGMHVEERPVVPDDEE*
Ga0070699_1008377512	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MATRTNDDDIDYTAEGLTPPAENDDPTNAGYDEAAHSGEGRYGVLEGQGGVFGTTGGGTYGRGMHVEERPAVSAERSEDETPSE*
Ga0070741_100516345	3300005529	Surface Soil	MANDDDIDYSAEGATPPREKDDPTNAGYDEAVRRGPGEYGVREGEGGVFGTTGGGTYPGGMHPVERPVIETERGEDEVD*
Ga0070697_1006863031	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MEGDSPLREKDDPTNDGYDEAAHKGAAYGKLEGDGGVFGTTGGGTYNRGMHVEERPVVPDDEE*
Ga0068853_1003576072	3300005539	Corn Rhizosphere	MANRRNDDDIDYQAEGEAPPREKDDPTNSGYDEAAHRGNRYGVPEGRGGVFGTSGGGTYEGGMHEEEPDKT*
Ga0068857_1001106092	3300005577	Corn Rhizosphere	MANDDIDYTAEGATPPHEKDDPTNAGYDEAAHNGPGAYGVLEGQGGVFGTTGGGTDDRGMHIEERPVIETERGKDEH*
Ga0068857_1006785772	3300005577	Corn Rhizosphere	MANDDNDIDYTAEGATPPGEKDDPTNEGYDEAAHSGPGAYGRLEGRGGVFGTTGGGTDARGMHVEERPAVATERGPDEAD*
Ga0068861_1002383422	3300005719	Switchgrass Rhizosphere	MATSKRDDEIDYTAEGRTPPHEKDDPTNEGYDEAVKNGEGVYGVLEGQGGVFGTTGGGTYGRGMHVEERPALTTERGKDEPVD*
Ga0066696_106855351	3300006032	Soil	IMAKDDDIDYTAEGSNPPREKDDPTNAGYDEAAHNGSGAYGVPEGRGGVFGTTGGGTYREGMHVVERPALESERGPDEPGPPRGADEA*
Ga0070716_1007110032	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MANRRNDDDIDYQAEGETPPHENEDPTNAGYDEAAHRGSRYGVPEGRGGVFGTSGGGTYEGGMHVEERPVVPKIGDES*
Ga0079222_122540142	3300006755	Agricultural Soil	MAKDDDIDYTAEGTNPPHEKEDPTNAGYDEAAHSGPGVYGVPEGRGGVFGTTGGGTYREGMHVVVRPALESERGPDEPGSPRGADEE*
Ga0079217_100995232	3300006876	Agricultural Soil	MTDQKTDGVDYTAEGSGPPHEKEDPTNEGYDEAAHSGPSRYGVLEGEGGVFGTTGGGTSSKGMHIEERPLVYEKKKD*
Ga0075436_1004177682	3300006914	Populus Rhizosphere	MTKDDDIDYTAEGAAPPREKDDPTNAGYDEAAHSGPGAYGVPEGRGGVFGTTGGGTYREGMHVVERPVSEAERGPDEPGAHRGAEDDEAS*
Ga0079218_114024272	3300007004	Agricultural Soil	MADQKTDDIDYTAEGSTTPHEKEDPTNEGYDDAAHSGPSRYGVLEGEGGVFGTTGGGTSNKGMHIEERPLVYEKKKD*
Ga0079218_126541221	3300007004	Agricultural Soil	MATRNDDDIDYTAEGRTPPREKDDPTNAGYDEAAHTGPGRYGVPEGQGGVFGTTGGGTYEGGMHEEERPVIETEKGKDEPAGS*
Ga0079218_134542302	3300007004	Agricultural Soil	RKDDDDIDYTAEGAAPPREKDDPTNAGYDEAAHKGPGRYGVPEGEGGVFGTTGGGTFKGGMHVEQRPAVANEPEEKE*
Ga0105244_103624481	3300009036	Miscanthus Rhizosphere	DDNIDYAAEGRTPPHEKDDATNEGYDEAVRSGEGRYGVPEGEGGVFGTTGGGTYGEGMHEEERPVVTTERGEDE*
Ga0105107_108589192	3300009087	Freshwater Sediment	MATRKDDDDIDYTAEGATPPQEKDDPTNAGYDEAAHKGPGRYGVPEGEGGVFGTTGGGTYKGGMHVVERPAIETERGEDEAPARKPTK*
Ga0111539_100000281	3300009094	Populus Rhizosphere	MATRKDDDDIDYTAEGATPPHEKDDPTNAGYDEAAHKGPGRYGVAEGEGGVFGTTGGGTDKRGLHVEERPAVGTRRDGK*
Ga0114129_104470572	3300009147	Populus Rhizosphere	MATSKQDDDNIDYIAEGRTPPRENDDPTNAGYDEAVRNGEGRYGVLEGRGGVFGTTGGGTYAGGMHEEERPAISTERGKDEPVE*
Ga0126310_116111882	3300010044	Serpentine Soil	MANDDKDIDYTAEGATPPHEKDDPTNEGYDEAAHKGPGAYGKLEGEGGVFGTSGGGTDERGMHEVDRDEVE*
Ga0126311_118928912	3300010045	Serpentine Soil	MATRDTDDDIDYTVEGATPPREKDDPTNAGYDEAVNTGDGRYGRLEGEGGVFGTTGGGTSDVGFHEVERPVIEGTEKGEDEA*
Ga0134122_126822392	3300010400	Terrestrial Soil	MATRKDDDEIDYTAEGLTPPAEKDDPTNAGYDEAAHSGAGRYGVPEGQGGVFGTTGGGTDARGMHVVERPVIEGTERGPDEPGPRRGADET*
Ga0134123_100006254	3300010403	Terrestrial Soil	MATRTNDDDIDYTAEGLTPPHETEDPTNAGYDEAAHTGEGRYGVPEGQGGVFGTTGGGTYGRGMHVEERPVLTTEKGKDEPPSR*
Ga0134123_133779952	3300010403	Terrestrial Soil	MANDKDDIDYTAEGATPPHEKDDPTNEGYDEAARKGLGAYGKLEGQGGVFGTTGGGTDDRGMHEVERPAIEGTERGPDEH*
Ga0137393_100031982	3300011271	Vadose Zone Soil	MATKRNDDDIDYTAEGSTPPHEKNDPTNAGYDEAAHHGSAYGVKEGEGGVFGTSGGGTYGEGLHEEERPVVDTEPSAKR*
Ga0137446_10031304	3300011419	Soil	MANDDIDYTAEGATPPHEKDDPTNAGYDEAAHEGPGAYGVLEGQGGVFGTTGGGSDDRGMHVEEIDE*
Ga0137446_11459312	3300011419	Soil	MANDDIDYTAEGATPPHEKEDPTNAGYDEAAHKGPGKYGVLEGQGGVFGTTGGGTDDRGMHVEERPVIETERGTDEH*
Ga0137448_10119123	3300011427	Soil	MANDDIDYTAEGATPPHEKDDRTNAGYDEAAHKGPGAYGVLEGQGGVFGTTGGGTDDRGMHVEEIDE*
Ga0137443_10066452	3300011433	Soil	MANDDDIDYTAEGATPPHEKDDPTNAGYDEAAHKGPGAYGVLEGQGGVFGTTGGGSDDRGMHVEEIDE*
Ga0120139_11289531	3300012019	Permafrost	MADIKDDIDYDAEGNTPPGEKNDPTNAGYDEAAHKGPSQYGVLEGEGGGFGTTGGGTYDAGLHVEDEEK*
Ga0137389_101851472	3300012096	Vadose Zone Soil	MANRTKDDDIDYSAEGETPPHEKDDPTNKGYDEAAHSGPGRYGVPEGSGGVFGTTGGGTYPKGMHVEERPVVDLSEDEEKKK*
Ga0137365_112951791	3300012201	Vadose Zone Soil	MADQKDDIDYNAEGNTPPREKNDPTNAGYDEAAHRGPSQYGVREGEGGVFGTTGGGTYEPGQHVDKE
Ga0137378_101866372	3300012210	Vadose Zone Soil	MANDDEIDYAMEGDTPPHEKEDKTNKGYDEAAHKGAAYGIREGSGGVFGTTGGGTYEGGLHEEERPVVPDTEK*
Ga0137372_105900582	3300012350	Vadose Zone Soil	MANKNDDDIDYTAEGATPPREREDDTAKGYDEAAHRGGAYGLPEGDGGVFGTTGGGTYEEGFQTEERPVVGEGEK*
Ga0137371_110566492	3300012356	Vadose Zone Soil	MANDDEIDYTAEGATPPHENDDPTNAGYDEAAQNGPGAYSVPEGRGGVFGTTGGGTYRGGMHVEERPAIQTERGNDEPGPPRASEDV*
Ga0150984_1208148001	3300012469	Avena Fatua Rhizosphere	NRRTDSDIDYTPEGATPTHEKDDPTNRGYDEAAHSGKGEYGVQEGNGGVFGTTGGGTYSEGMHVVERPVIEGTEKGEDEV*
Ga0164298_104576892	3300012955	Soil	MADQKKRDDGIDYTAEGSTPPHEKHDSTDEGYDEAAHSGPSRYGVLEGEGGVFGTTGGGTPDIGQHIEELPFVGGNKPTRDH*
Ga0164304_107642252	3300012986	Soil	MAEKKKDDIDYEAEGNTPPKEKNDPTNAGYDEAAHSGPSRYGVAEGEGGVFGTTGGGTYEQGQHEDEEK*
Ga0075316_11343302	3300014314	Natural And Restored Wetlands	PTCASIGSEACNPDRVMATDDELDYDAEGASPPHEKDDPTAPGYDEAVHRGPGEYGIPEGRGGVFGTTGGGTYKGGMHPVERPVIETERGEDEPGGAKD*
Ga0157377_1000012542	3300014745	Miscanthus Rhizosphere	MANDDNDDIDYTAEGATPPHEKDDPTNEGYDEAAHRGPGAYGKLEGQGGVFGTTGGGTDDRGMHEVERPAIEGTERGPDEH*
Ga0167656_10042262	3300015076	Glacier Forefield Soil	MATKKDDIDYDAEGNTPPREKNDPTNAGYDEAAHSGPSRFGVLEGEGGVFGTTGGGTYEKGQHVDEEK*
Ga0167624_10023782	3300015083	Glacier Forefield Soil	MATDRPGNDKQDDAIDYTAEGATPPHEKDDPTNAGYDEAARTGPGEYGVPEGRGGVFGTTGGGTYDKGFQVEERPTVGRDEEAKK*
Ga0167653_10585202	3300015162	Glacier Forefield Soil	MADKKDDIDYEAEGNTPPHEKNDPTNAGYDEAAHSGPSKFGVPEGEGGVFGTTGGGTYEPGQHVDKEK*
Ga0134073_103487582	3300015356	Grasslands Soil	MAKDDDIDYTAEGATPPNENEDPTNAGYDEAAHNGSGAYGVPEGRGGVFGTTGGGTYREGMHVVERPALESERGPDEPGSSRGADEA*
Ga0184615_104578482	3300018059	Groundwater Sediment	MANRKNDDDIDYRAEGEAPPHEKDDPTAKGYDQAAHSGPSRFGVPEGNGGVFGTTGGGTYQGGLHVDEQEKEKDSTDGG
Ga0184629_106456901	3300018084	Groundwater Sediment	MANDDIDYTAEGATPPHEKEDPTNAGYDEAAHKGPGAYGVLEGQGGVFGTTGGGTDDRGMHVEERPVIETERGPDEH
Ga0190272_10000004111	3300018429	Soil	MATPRDEEIDYNAEGATPPREKDDPTNAGYDEAAHSGPGQYGVPEGQGGVFGTTGGGTYEGGFQEVERPVVEGIEKGPDETNK
Ga0190275_120098852	3300018432	Soil	MAIRKDDDIDYTAEGATPPREKDDSTNAGYDEAAHTGPGRYGVPAGEGGVFGTTGGGTDERGMHEVERPVIETEKGEDEG
Ga0190268_101927491	3300018466	Soil	MATRDTDDDIDYTVEGATPPREKDDPTNAGYDEAVNTGDGRYGRLEGEGGVFGTTGGGTSDVGFHEVERPVIEGTEKGEDEV
Ga0066662_112378512	3300018468	Grasslands Soil	MAKDDDIDYTAEGANPPNEKDDPTNAGYDEAAHNGPGAYGVPEGRGGVFGTTGGGTYREGMHVVERPALESERGPDEPGPPRGADEA
Ga0190270_1000006012	3300018469	Soil	MATRDKDDDIDYTVEGATPPREKDDPTNAGYDEAVNTGDGRYGVLEGEGGVFGTTGGGTTDVGFHEVERPVIEGTEKGEDEV
Ga0190274_122572722	3300018476	Soil	MATPKDSDDIDYTAEGATPPHEKDDPTNAGYDEAAHKGPGRYGVAEGEGGVFGTTGGGTDKRGLHVEERPAVGTGRDEK
Ga0190267_102510621	3300019767	Soil	MATRDKDDDIDYTVEGATPPREKDDPTNAGYDEAVNTGDGRYGVLEGEGGVFGTSGGGTSDVGFHEVERPVIEGTEKGEDEV
Ga0196977_10000586	3300020146	Soil	MATDRDNDIDYTAEGATPPREKNDPTNEGYDEAARTGPGRYGVPEGEGGVFGTTGGGTYQGGLHEVERPAVETERGEDEV
Ga0196976_10533712	3300020147	Soil	MATRKDNDDIDYTLEGSTPPREKDDPTNEGYDEAAHSGPGRYGVPEGEGGVFGTTGGGTSRNGMHVVERPAISTERGEDER
Ga0210377_1000014320	3300021090	Groundwater Sediment	MANRKNDDDIDYRAEGEAPPHEKDDPTAKGYDQAAHSGPSRFGVPEGNGGVFGTTGGGTYQGGLHVDEQEKEKDSTDGGK
Ga0193706_10014338	3300021339	Soil	MATPKDEDIDYTAEGATPPREKHDPTDAGYDEAAHRGPGKYGVPEGQGGVFGTTGGGTSPKGMHVEERPAVGTKDEEKN
Ga0213874_102911392	3300021377	Plant Roots	MANRRNDDEIDYEPEGETPPREKNDPTDAGYDEAAHRGNRYGVPEGRGGVFGTSGGGTFEGGMHVEERPLVYEDDKERDES
Ga0213876_101474262	3300021384	Plant Roots	MANRKDDDIDYTPEGDTPPVEKNDPTNEGYDEAAHSGAAYGLREGEGGVFGTTGGGTYNRGLHVEERPVVPDVPDDEK
Ga0193698_10035683	3300021968	Soil	MATDKERDDIDYTAEGAAPPREKDDPTNAGYDEAAHTGPGRYGVPEGEGGVFGTTGGGTFQGGMHEVERPAIETERGEDEAPAHKPTK
Ga0247770_12229392	3300022891	Plant Litter	MATRNDDDIDYTAEGATPPREKNDPTNEGYDEAAHTGPGRYGVPEGEGGVFGTTGGGTFQGGLHEVERPAIETEKGEDEV
Ga0196960_100231042	3300024426	Soil	MATRDNDDDIDYTVEGATPPREKDDPTNAGYDEAVNTGDGRYGRLEGEGGVFGTTGGGTSDVGFHEVERPVIEGTEKGEDEV
Ga0207695_100045475	3300025913	Corn Rhizosphere	MANRRNDDDIDYQAEGEAPPREKDDPTNSGYDEAAHRGNRYGVPEGRGGVFGTSGGGTYEGGMHEEEPDKT
Ga0207660_100810362	3300025917	Corn Rhizosphere	MATSKRDDEIDYTAEGRTPPHEKDDPTNEGYDEAVKNGEGVYGVLEGQGGVFGTTGGGTYGRGMHVEERPALTTERGKDEPVE
Ga0207646_101149143	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MANDDEIDYAMEGDSPLREKDDPTNDGYDEAAHKGAAYGKLEGDGGVFGTTGGGTYNRGMHVEERPVVPDDEE
Ga0207659_10000011152	3300025926	Miscanthus Rhizosphere	MATEDDNIDYAAEGRTPPHEKDDATNEGYDEAVRSGEGRYGVPEGEGGVFGTTGGGTYGEGMHEEERPVVTTERGEDE
Ga0207665_106513942	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MANRRNDDDIDYQAEGETPPHENEDPTNAGYDEAAHRGSRYGVPEGRGGVFGTSGGGTYEGGMHVEERPVVPKKDDES
Ga0207708_113364151	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	PGAGFALERRIMATRNDDDIDYTAEGATPPRDKDDPTNAGYDEAVNTGDGRYGRLEGQGGVFGTTGGGTFEGGFHEVERPVIEGTEKGEDEV
Ga0207674_101279702	3300026116	Corn Rhizosphere	MANDDIDYTAEGATPPHEKDDPTNAGYDEAAHNGPGAYGVLEGQGGVFGTTGGGTDDRGMHIEERPVIETERGKDEH
Ga0207674_110844881	3300026116	Corn Rhizosphere	MANDDNDIDYTAEGATPPGEKDDPTNEGYDEAAHSGPGAYGRLEGRGGVFGTTGGGTDARGMHVEERPAVATERGPDEAD
Ga0207675_1000242962	3300026118	Switchgrass Rhizosphere	MATSKRDDEIDYTAEGRTPPHEKDDPTNEGYDEAVKNGEGVYGVLEGQGGVFGTTGGGTYGRGMHVEERPALTTERGKDEPVD
Ga0209153_12678382	3300026312	Soil	MAKDDDIDYTAEGSNPPNEKDDPTNAGYDEAAHNGPGAYGVPEGRGGVFGTTGGGTYREGMHVVERPALESERGPDEPGPPRGADEA
Ga0179587_105635382	3300026557	Vadose Zone Soil	MATNHSNNDDLNYAAEGTTPLHEKDDPTNAGYDEAAHTGPGRYGVQEGEGGVFGTTGGGSYGLGLHVVEGSEVDSEKGQGKNR
Ga0209818_12068152	3300027637	Agricultural Soil	MTDQKTDGVDYTAEGSGPPHEKEDPTNEGYDEAAHSGPSRYGVLEGEGGVFGTTGGGTSSKGMHIEERPLVYEKKKD
Ga0209486_108435781	3300027886	Agricultural Soil	MADQKTDDIDYTAEGSTTPHEKEDPTNEGYDDAAHSGPSRYGVLEGEGGVFGTTGGGTSNKGMHIEERPLVYEKKKD
Ga0207428_100000281	3300027907	Populus Rhizosphere	MATRKDDDDIDYTAEGATPPHEKDDPTNAGYDEAAHKGPGRYGVAEGEGGVFGTTGGGTDKRGLHVEERPAVGTRRDGK
Ga0247750_10112421	3300027992	Soil	MDYAAEGSTPPREKDDPTNEGYDEAVNTGDGRYGRLEGQGGVFGTTGGGTFEGGFHEVERPVIEGTEKGEDER
Ga0307291_10674942	3300028707	Soil	MATRKDDDDIDYTAEGATPPHEKDDATNAGYDEAAHKGPGRYGVAEGEGGVFGTTGGGTDKRGLHVEQRPTVGTERDDEK
Ga0307309_101713722	3300028714	Soil	EGATPPQEKDDPTNAGYDEAAHKGPGRYGVAEGEGGVFGTTGGGTDKRGLHVEERPAVGTGRDDEK
Ga0307319_103113281	3300028722	Soil	MATRNDNDDIDYTAEGAAPPREKDDPTNEGYDEAAHSGPGRYGVPEGEGGVFGTTGGGTFQGGMHEVERPAIETEKGEV
Ga0307318_100638132	3300028744	Soil	MATRNDDDIDYTAEGATPPRDKEDPTNAGYDEAVNTGDGRYGRLEGEGGVFGTTGGGTSDVGFHEVERPVIEGTEKGEDEV
Ga0268243_11544151	3300030510	Soil	MATQRNDDDIDYTAEGRTPPHEKDDPTNAGYDEAAHSGDGRYGIVEGQGGVFGTTGGGTYEGGMHEVERPAIETEKGEDE
Ga0307502_100232072	3300031164	Soil	MATPKDEEIDYTAEGATPPHEKDDSTNAGYDEAAHSGPGQYGVPEGQGGVFGTTGGGTYEGGFQEVERPVVEVEKGP
Ga0307408_1006646801	3300031548	Rhizosphere	MADQKTDDIDYTAEGSTPPHEKEDATNEGYDQAAHSGPSRYGVLEGEGGVFGTTGGGTSKKGMHIEERPLVYEKKKD
Ga0307413_103125142	3300031824	Rhizosphere	MATDKRSGDEGIDYKPEGATPPHEKEDPTNKGYDEAAHSGPGRYGVLEGQGGVFGTTGGGTPNIGMHVEERPTVGREDDE
Ga0307410_115301311	3300031852	Rhizosphere	MATDKRSGDEGIDYKPEGATPPHEKEDPTNKGYDEAAHSGPGRYGVLEGQGGVFGTTGGGTPNIGMHVEERPTVGR
Ga0307479_109993442	3300031962	Hardwood Forest Soil	MANRKNDDDIDYEAEGNTPPHEKDDPTNAGYDEAAHRGNQFGVPEGRGGVFGTNGGGTFEGGMHVEDPDKS
Ga0307416_1027709422	3300032002	Rhizosphere	MATDKRSGDEGIDHKPEGATPPHEKEDPTNKGYDEAAHSGPGRYGVLEGQGGVFGTTGGGTPNIGMHVEERPTVGREDDEEK
Ga0307470_100008872	3300032174	Hardwood Forest Soil	MATKLDDDGIDYTPEGSAPPHDKDDPTNAGYDEAAHNGPGVYGVQEGMGGVFGTTGGGTYSGGMHEEERPAVDTEKKHKA
Ga0307470_111625631	3300032174	Hardwood Forest Soil	MATKDDDIDYTAEGKTPPHEREDPTNAGYDEAAHSGEGKYGELEGRGDVFGTSDDGTYRGGMHVVERP
Ga0307472_1016454742	3300032205	Hardwood Forest Soil	MATKPDDDGIDYTAEGSTPPHEKDDPTNDGYDEAAHNGPGVYGVKEGQGGVFGTTGGGTYRGGMHEEERPTVDVEKKPKLSG
Ga0335085_116391111	3300032770	Soil	MANEDDIDYTAEGSTPPHEKQDPTNEGYDEAAHRGPGEYGVKEGEGGVFGTTGGGSFPEGMHVEERP
Ga0334949_010727_1312_1560	3300034027	Biocrust	MATRDKDDDIDYTVEGATPPHEKDDPTNEGYDEAVNTGDGRYGVLAGEGGVFGTSGGGTADVGFHEVERPVIEGTEKGPDER
Ga0334928_122219_281_523	3300034134	Hypolithic Biocrust	MATRNDDDIDYTAEGATPPREKEDPTNAGYDEAAHSGPGRYGVPEGEGGVFGTTGGGTFQGGLHEVERPTIETEKGEDEV
Ga0334963_000097_41756_42001	3300034145	Sub-Biocrust Soil	MATRNDDDIDYTVEGATPPREKDDPTNAGYDEAVNSGDGRYGRLVGEGGVFGTSGGGTADVGFHEVERPVIEGTEKGEDEV
Ga0370499_0079044_483_725	3300034194	Untreated Peat Soil	MATRKDDDIDYTAEGATPPHEKDDATNAGYDEAAHHGPGRYGVPEGEGGVFGTTGGGTYKGGMHVEERPVVEAEREDDEK
Ga0334948_002926_4268_4516	3300034760	Sub-Biocrust Soil	MATRDQDDDIDYTVEGGTPPREKDDPTNAGYDEAVNTGDGRYGRLEGEGGVFGTTGGGTSDVGFHEVERPVIEGTEKGEDEV
Ga0334935_005020_3305_3553	3300034781	Biocrust	MANRSDDDIDYTVEGATPPHEKDDPTNEGYDEAVNTGDDRYGVLEGEGGVFGTSGGGTSDVGFHEVERPVIEGTERGEDEVG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.12
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.12
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081677

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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