Metagenome Family F081525

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081525
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	130 residues
Representative Sequence	MKIRLAATALSCLLAANVASAACVNRFVSRAERPRQVVTLLTGKLTFQEAQALSAAIQKQTSPPLEWVDDKGKAIAKQFGELKVVRPMPVGCDGKTSGVVMIVAFATFSSPEKKMLVKLDPNTTVAFDQQAE
Number of Associated Samples	95
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	39.82 %
% of genes near scaffold ends (potentially truncated)	31.58 %
% of genes from short scaffolds (< 2000 bps)	63.16 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.123 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (14.912 % of family members)
Environment Ontology (ENVO)	Unclassified (34.211 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.614 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 9.38% β-sheet: 31.87% Coil/Unstructured: 58.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
d.265.1.4: Pseudouridine synthase	d1sb7a1	1sb7	0.55
d.265.1.4: Pseudouridine synthase	d1sb7a1	1sb7	0.55
b.20.1.1: ENV polyprotein, receptor-binding domain	d1aola_	1aol	0.54
d.185.1.2: LuxS/MPP-like metallohydrolase	d1j98a_	1j98	0.54
f.46.1.1: HlyD-like secretion proteins	d1vf7a_	1vf7	0.54
d.185.1.2: LuxS/MPP-like metallohydrolase	d4xcha_	4xch	0.54
b.20.1.1: ENV polyprotein, receptor-binding domain	d1aola_	1aol	0.54
d.185.1.2: LuxS/MPP-like metallohydrolase	d1j98a_	1j98	0.54
f.46.1.1: HlyD-like secretion proteins	d1vf7a_	1vf7	0.54
d.185.1.2: LuxS/MPP-like metallohydrolase	d4xcha_	4xch	0.54

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00378	ECH_1	21.05
PF07228	SpoIIE	5.26
PF06386	GvpL_GvpF	3.51
PF14870	PSII_BNR	2.63
PF04055	Radical_SAM	1.75
PF00672	HAMP	1.75
PF13419	HAD_2	1.75
PF01676	Metalloenzyme	0.88
PF15902	Sortilin-Vps10	0.88
PF02153	PDH_N	0.88
PF07676	PD40	0.88
PF05120	GvpG	0.88
PF07715	Plug	0.88
PF08309	LVIVD	0.88
PF01556	DnaJ_C	0.88
PF02801	Ketoacyl-synt_C	0.88
PF00275	EPSP_synthase	0.88
PF07498	Rho_N	0.88
PF05016	ParE_toxin	0.88
PF06508	QueC	0.88
PF04255	DUF433	0.88
PF14332	DUF4388	0.88
PF14815	NUDIX_4	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	0.88
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	0.88
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.88
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.88
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.88
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.88
COG0484	DnaJ-class molecular chaperone with C-terminal Zn finger domain	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	0.88
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.88
COG0780	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily	Translation, ribosomal structure and biogenesis [J]	0.88
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	0.88
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.88
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	71.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.51 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	71.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.75 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.93 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.93 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.93 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.93 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.93 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Unclassified	root	N/A	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_12287348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300000956\|JGI10216J12902_102276675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300000956\|JGI10216J12902_105155997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1491	Open in IMG/M
3300003313\|P32013IDBA_1143137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1008	Open in IMG/M
3300003319\|soilL2_10048836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5116	Open in IMG/M
3300003319\|soilL2_10119674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2272	Open in IMG/M
3300003321\|soilH1_10383365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1089	Open in IMG/M
3300004071\|Ga0055486_10043842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300004156\|Ga0062589_101334727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300004463\|Ga0063356_101073770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1157	Open in IMG/M
3300005293\|Ga0065715_10188582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1429	Open in IMG/M
3300005293\|Ga0065715_10483627	All Organisms → cellular organisms → Bacteria → Proteobacteria	795	Open in IMG/M
3300005340\|Ga0070689_100888666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300005343\|Ga0070687_100004235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5697	Open in IMG/M
3300005354\|Ga0070675_100000004	All Organisms → cellular organisms → Bacteria	361974	Open in IMG/M
3300005356\|Ga0070674_101152517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300005441\|Ga0070700_100000086	All Organisms → cellular organisms → Bacteria	62330	Open in IMG/M
3300005459\|Ga0068867_100691394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300005549\|Ga0070704_100112164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2077	Open in IMG/M
3300005549\|Ga0070704_100987030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300005615\|Ga0070702_100914222	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005719\|Ga0068861_102161923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300006196\|Ga0075422_10002471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5515	Open in IMG/M
3300006755\|Ga0079222_10588571	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300006844\|Ga0075428_100003719	All Organisms → cellular organisms → Bacteria	16719	Open in IMG/M
3300006845\|Ga0075421_100001973	All Organisms → cellular organisms → Bacteria	24316	Open in IMG/M
3300006845\|Ga0075421_100187072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2572	Open in IMG/M
3300006854\|Ga0075425_100003361	All Organisms → cellular organisms → Bacteria	16267	Open in IMG/M
3300006876\|Ga0079217_11601775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300006880\|Ga0075429_100085294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2753	Open in IMG/M
3300006904\|Ga0075424_100036906	All Organisms → cellular organisms → Bacteria	5075	Open in IMG/M
3300006904\|Ga0075424_100638616	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300006904\|Ga0075424_102754719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300006918\|Ga0079216_10282061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300006918\|Ga0079216_10393107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300007004\|Ga0079218_12360325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300009078\|Ga0105106_11137545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300009100\|Ga0075418_12550447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300009147\|Ga0114129_10257945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2338	Open in IMG/M
3300009147\|Ga0114129_12042547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300009147\|Ga0114129_13045031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300009156\|Ga0111538_10856240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1151	Open in IMG/M
3300009176\|Ga0105242_10004212	All Organisms → cellular organisms → Bacteria	11209	Open in IMG/M
3300010044\|Ga0126310_10646444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300010400\|Ga0134122_10340934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1302	Open in IMG/M
3300010403\|Ga0134123_10001375	All Organisms → cellular organisms → Bacteria	15832	Open in IMG/M
3300010403\|Ga0134123_10879971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300011427\|Ga0137448_1238788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300011436\|Ga0137458_1147854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300012040\|Ga0137461_1172286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300012209\|Ga0137379_11717407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300012527\|Ga0136633_1128457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300012905\|Ga0157296_10324267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300013306\|Ga0163162_10678292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1153	Open in IMG/M
3300014326\|Ga0157380_12066571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300014745\|Ga0157377_10422155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	913	Open in IMG/M
3300014745\|Ga0157377_11695502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300014877\|Ga0180074_1003469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2698	Open in IMG/M
3300018063\|Ga0184637_10732299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300018429\|Ga0190272_10000002	All Organisms → cellular organisms → Bacteria	272849	Open in IMG/M
3300018432\|Ga0190275_10028348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4454	Open in IMG/M
3300018432\|Ga0190275_12693504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300018465\|Ga0190269_10008596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4592	Open in IMG/M
3300018466\|Ga0190268_10414109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300018466\|Ga0190268_11531493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300018469\|Ga0190270_10000008	All Organisms → cellular organisms → Bacteria	204149	Open in IMG/M
3300018906\|Ga0193609_1026164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1907	Open in IMG/M
3300020146\|Ga0196977_1000038	All Organisms → cellular organisms → Bacteria	95501	Open in IMG/M
3300020181\|Ga0196958_10003432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4706	Open in IMG/M
3300020181\|Ga0196958_10434104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300020215\|Ga0196963_10445096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300020215\|Ga0196963_10477878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300021289\|Ga0213903_104452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300021358\|Ga0213873_10000001	All Organisms → cellular organisms → Bacteria	1657979	Open in IMG/M
3300021384\|Ga0213876_10004603	All Organisms → cellular organisms → Bacteria → Proteobacteria	7690	Open in IMG/M
3300021968\|Ga0193698_1001525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2805	Open in IMG/M
3300023062\|Ga0247791_1013508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300023168\|Ga0247748_1057021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300024426\|Ga0196960_10007980	All Organisms → cellular organisms → Bacteria	2666	Open in IMG/M
3300025289\|Ga0209002_10492438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300025324\|Ga0209640_10580838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300025728\|Ga0207655_1175464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300025918\|Ga0207662_10008154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5727	Open in IMG/M
3300025926\|Ga0207659_10000002	All Organisms → cellular organisms → Bacteria	619441	Open in IMG/M
3300025934\|Ga0207686_10004700	All Organisms → cellular organisms → Bacteria	7321	Open in IMG/M
3300025936\|Ga0207670_11468606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300025942\|Ga0207689_10990893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300026075\|Ga0207708_10000035	All Organisms → cellular organisms → Bacteria	140227	Open in IMG/M
3300026089\|Ga0207648_12037578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300027640\|Ga0209347_1012245	All Organisms → cellular organisms → Bacteria	5706	Open in IMG/M
3300027886\|Ga0209486_10899400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300027907\|Ga0207428_10000001	All Organisms → cellular organisms → Bacteria	1034622	Open in IMG/M
3300027909\|Ga0209382_10019291	All Organisms → cellular organisms → Bacteria	8298	Open in IMG/M
3300027909\|Ga0209382_11232353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300028578\|Ga0272482_10046777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1138	Open in IMG/M
3300031164\|Ga0307502_10019212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1171	Open in IMG/M
3300031164\|Ga0307502_10027911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300031455\|Ga0307505_10006447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6410	Open in IMG/M
3300031538\|Ga0310888_10661907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300031731\|Ga0307405_11527316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300031740\|Ga0307468_101520335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300032002\|Ga0307416_101024814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	929	Open in IMG/M
3300032002\|Ga0307416_103190018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300032012\|Ga0310902_10543464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300034008\|Ga0334942_001268	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	9621	Open in IMG/M
3300034139\|Ga0334956_000134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32334	Open in IMG/M
3300034145\|Ga0334963_000432	All Organisms → cellular organisms → Bacteria	16027	Open in IMG/M
3300034146\|Ga0334964_000024	All Organisms → cellular organisms → Bacteria	158061	Open in IMG/M
3300034194\|Ga0370499_0057389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300034221\|Ga0334937_206134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300034377\|Ga0334931_117406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300034760\|Ga0334948_003358	All Organisms → cellular organisms → Bacteria	5064	Open in IMG/M
3300034781\|Ga0334935_005395	All Organisms → cellular organisms → Bacteria	3515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.04%
Host-Associated	Host-Associated	35.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.02%
Plants	Host-Associated → Plants	35.96%
Aquatic	Environmental → Aquatic	7.02%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.89%
Sediment	Environmental → Aquatic → Sediment	4.39%
Freshwater	Environmental → Aquatic → Freshwater	1.75%
Marine	Environmental → Aquatic → Marine	0.88%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.88%
Roots	Host-Associated → Plants → Roots	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	24.56%
Loam	Environmental → Terrestrial → Soil → Loam	8.77%
Sand	Environmental → Terrestrial → Soil → Sand	6.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.39%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	3.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.88%
Ice	Environmental → Aquatic → Freshwater → Ice	0.88%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.88%
Clay	Environmental → Terrestrial → Deep Subsurface → Clay	0.88%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	24.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.89%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	6.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.39%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	3.51%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	3.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.88%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.88%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.88%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Clay → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	5.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.39%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.51%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	3.51%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.51%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	3.51%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.63%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.88%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.88%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.88%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.88%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Ore Pile And Mine Drainage Contaminated Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.88%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.88%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Clay → Unclassified → Deep Subsurface	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003313	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P3 sample	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004071	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014877	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10D	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018906	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021289	Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hobet_Cave_3	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300023062	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4	Environmental	Open in IMG/M
3300023168	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5	Environmental	Open in IMG/M
3300024426	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025728	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027640	Deep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/23 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300034008	Biocrust microbial communities from Mojave Desert, California, United States - 38SMC	Environmental	Open in IMG/M
3300034139	Biocrust microbial communities from Mojave Desert, California, United States - 52SNC	Environmental	Open in IMG/M
3300034145	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 59SNS	Environmental	Open in IMG/M
3300034146	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 60SNS	Environmental	Open in IMG/M
3300034194	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_17	Environmental	Open in IMG/M
3300034221	Biocrust microbial communities from Mojave Desert, California, United States - 33SMC	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034760	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 44SMS	Environmental	Open in IMG/M
3300034781	Biocrust microbial communities from Mojave Desert, California, United States - 31SMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0194.00003660	2162886012	Miscanthus Rhizosphere	MKRIILPLGLLLLSAHTASAACVNRFVARSEYPRQVVTLLTGKLTFQEAQSLAEAIRRKQAPGLEWVSDQGKTVAKQFGDLKIVRPMPVGCDGKSSGVVMIATFGASAAPSKKMFVKLDPNTTVDFEQQAD
JGI10216J12902_1022766751	3300000956	Soil	MKIRFSALVTTCLLVVNAASAACVNRFVNRTERPRQVVTLLTGKLTFQEAQALAASIQTKKSPPLEWVGEDGRSIAKQFGELKVVRPMPVGCDGKTSGVVMIATFATSVVPSKKMLVKLNPDTTVAFDQQAE*
JGI10216J12902_1051559972	3300000956	Soil	MRTLIASAVASLLVANAASAACVNRFVYRTERPLQVVTLLTGKLTFQEAQALAAAIAKKQAPPLEWLAADGRPIAKQYGELKVVRPMPVGCDGKASGVVVIASFGTSLPPSKKMLVKINADTTVEFEEQAK*
P32013IDBA_11431372	3300003313	Ore Pile And Mine Drainage Contaminated Soil	MKKLALVLLPLLFSAPALSAACVNRFVARTQHPHQVVTLLTGKLTFQEAQALAEAIKKKQAPGLEWVNDQGKVLARQFGDLKVVRPMPVGCDGKTSGVILIATFGAGAPPVKKMFVKLDANTTVEFEQQAE*
soilL2_100488362	3300003319	Sugarcane Root And Bulk Soil	MTKRSLPLLLALCVLTPQAFAACMNKFVSRTERPHQVVTLLTGKLTFQEAQELAKAIAAKQSPPIEWVDDSGKPVAKQFGELKVVRPMPVGCDGRSSGVVIVVAFPTGNVPSKKINIKFKADETVAFEQQSE*
soilL2_101196742	3300003319	Sugarcane Root And Bulk Soil	MNYRIPAVAFAILLAAQVASAQTCVNRFVNRTERPLQVVTLLTGKLTFQEAQDLAKAIKAKEAPALEWVDANGKLLARQFGDLKVVRPMPVGCDGKKSGVVMIASFAAGAAPMKKMHVKLNADTVVAFEEQ*
soilH1_103833652	3300003321	Sugarcane Root And Bulk Soil	MKIVRTLAALSVAALLAHTASAACVNRFVARTERPLQVVTLLTGKLTFQEASDLAAAISKKQAPPVEWLLEDGKTYAKQHGDLKIVRPMPVGCDGKTSGVVIVATFGAVRPPEKSMIVKLTPDTTVTFEQQN*
Ga0055486_100438422	3300004071	Natural And Restored Wetlands	MKRTLFVLLALGALAPAASAACLNRFANRTERTQQVVTLLTGKLTFQEAQALAKAIDSKQESPLEWVDNDGKTISQQFGELKVLRPMPVGCDGRTSGVILVVHFPSLNTPTRKINVKLKGETVVFEQQE*
Ga0062589_1013347271	3300004156	Soil	MSMKIRFSASVAACLLVANVASAACVNRFVSRTERPRQVVTLLTGKLTFQEAQALAAAINKKASPPVEWVGDDGKTISKQFGELKVVRPMPVGCDGKTSGVVMIVTFATSVIPAKKMLVKLNPETTVAFDQQAE*
Ga0063356_1010737702	3300004463	Arabidopsis Thaliana Rhizosphere	CVNRFVARRERNQQVVTLLTGKLTFQEAQALAARMKSGEAPRFEWVSAQGKTIAKQVGELHVVRPMPVGCDGKTSGVVVIAYFLAVQPPSHTMDVKFDDSTTVSFAEQAN*
Ga0065715_101885821	3300005293	Miscanthus Rhizosphere	MKRIILPLGLLLLSAHTASAACVNRFVARSEYPRQVVTLLTGKLTFQEAQSLAEAIRRKQAPGLEWVSDQGKTVAKQFGDLKIVRPMPVGCDGKSSGVVMIATFGASAAPSKKMFVKLDPNTTVDFEQQAD*
Ga0065715_104836272	3300005293	Miscanthus Rhizosphere	CVNRFVSRTERPRQVVTLLTGKLTFQEAQALAAAINKKASPPVEWVGDDGKTISKQFGELKVVRPMPVGCDGKTSGVVMIVTFATSVIPAKKMLVKLNPDTTVTFDQQAE*
Ga0070689_1008886661	3300005340	Switchgrass Rhizosphere	MSIVRLTAVAVLLLAAQVASGAQCVNRFVSTRQGVRNVVTLLTGKLTFQEAQQLAKAIQAKQSPPVEWVDDGGKPIGKQSGPLEVVRPMPVGCDGKTSGVVMIVNFATANTPAKKMNVKLNADTTVAF
Ga0070687_1000042352	3300005343	Switchgrass Rhizosphere	MKIRIAVAALALSIAAGTASAACMNRFVVRSDGNQQVVTLLTGKLTFQEAQELAKKISDGQAPGLEWTNDSGKTISRQTGELKVVRPMPVGCDSKPSGVVIIARFLAVQPPSKKMNVKLDANTTVAFDEQP*
Ga0070675_100000004217	3300005354	Miscanthus Rhizosphere	MSISRLTAVAVLLLGAQVASGAQCVNRFVATRQGVRHVVTLLTGKLTFQEAQQLAKAIQAKQSPPLEWVDDSGKSIAKQSGMLEVVRPMPVGCDGKTSGVVMIVNFATASAPAKKMNLKLNADTTVAFEEQGK*
Ga0070674_1011525172	3300005356	Miscanthus Rhizosphere	MTSIRTSAALLLLTFAAHGASAACVNRFVARSERPRQIITLLTGKLTFQEAQALADAINKRQAPPLEWVTEDNKSVAKQFGELKVVRPMPVGCDGKTSGVVMVATFGANLPPVKKMFVKLNADTTVAFDEQAGN*
Ga0070700_10000008666	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MSTARIFVVAAVLVCAQAATAAQCVNRFISRAEGPRQVVTLLTGKLTFQEAQALSKAIQSRTAPPLEWVNDAGKTLYKQIGELKVLRPMPVACDGKPSGVVMVVTFPTQIKPTKKMRVKLDANTIVEFEQQAD*
Ga0068867_1006913942	3300005459	Miscanthus Rhizosphere	FRRFHVCLSSVMSIVRLTAVAVLLLGAQIASGAQCVNRFVSTRQGVRNNVTLLTGKLTFQEAQQLAKAIQGKQSPPLEWVDDAGKLIAKQSGPLEVVRPMPVGCDGKTSGVVMIVTFNTANTPAKKLNLKLDAKTTVAFEEQGK*
Ga0070704_1001121641	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	SAACVNRFVNRTERPRQVVTLLTGKLTFQEAQALAASIQKKSSPPLEWIGDDGRTISKQFGELKVVRPMPVGCDGKTSGVVMIASFATSVVPAKKMLVKLDPETTVTFDQQAD*
Ga0070704_1009870301	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRIVLFFLLSIVAVLMAETASAAVCMNKFVARRDRMAQVVTLLTGKLTFQEAQDLAKAINDRKAPPLEWVDDSGKTIAKQFGELKVVRPMPVGCDGKTSGVVLIVNFVSPATPTKK
Ga0070702_1009142222	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	ACVNKFMTRSDGSRQIITFLTGKLTFEEAQALAAGINQRKAEPIEWVDDKGKTVAKQHGELKVVRPMPVGCDGKSSGVVMVATFASNISPSKKMWVKLNPDTTVEFEQQAD*
Ga0068861_1021619231	3300005719	Switchgrass Rhizosphere	YSRSGDCLRERMKTRLALSALACLAAAHVASAACVNKFVSRTERPRQVVTLLTGKLTFQEAQALSMSIQKKESAPVEWVTEDGKPIAKQFGELKIVRPMPVGCDGKTSGVVMVATFGANLAPSKKMFVKLDANTTVAFDEQAQ*
Ga0075422_100024713	3300006196	Populus Rhizosphere	MSIKIRFSASVAACLLVANVASAACVNRFVSRTERPRQVVTLLTGKLTFQEAQALAAAINKKASPPVEWVGDDGKTISKQFGELKVVRPMPVGCDGKTSGVVMIVTFATSVIPTKKMLVKLDAETTVAFDQQAE*
Ga0079222_105885713	3300006755	Agricultural Soil	SLRQTVLGPLAHMKIRLSLSLLACLLAANLASAACVNRFVSRTERPRQVVTLLTGKLTFQEAQALSAAIQKKDAQPIEWIGADGKVISKQYGELKIVRPMPVGCDGKSSGVVMIVNFATASTPSKKMTVKLSSDTTVDFEQQAE*
Ga0075428_1000037196	3300006844	Populus Rhizosphere	MIKRLSFIASVLLLIVGANTASAACVNRYVSRTERPRTVLTLLTGKLTFQEAQALAEAIKTKQAPPLEWVDESGKTVARQSGDLKVVRPMPVACDGKPSGVVMVAEFLTVITPPKKITVKLNPDTPVVFEQQAE*
Ga0075421_10000197315	3300006845	Populus Rhizosphere	MKIARLFLALSLVILGAQAASAECVNRFVVRTERPLQVVTFLTGKLTFQEAQALAAAIQKKQAPPLEWINDAGKSVAKQYGELKVVRPMPVGCDGKTSGVVLVAQFGSALTPSKKMLVKLNADTTVTFEEQAK*
Ga0075421_1001870721	3300006845	Populus Rhizosphere	MIKRLSFTASVLLLIVGANPASAACVNRFVSRTERPRQVLTLLTGKLTFQEAQALAEAIKTKQAPPLEWVDQNGKTVARQAGDLKVVRPMPVACDGKPSGVVMVVDFLTVITPEKKITVKLNPDTPVVFEQQSE*
Ga0075425_10000336112	3300006854	Populus Rhizosphere	MVRRFIPLFLLSILAVFPAIFMVETASAATCVNKFVSRRERLSAVVTLLTGKLTFQEAQELAKNINDRKSPPLEWVDDSGKTVAKQFGELKVVRPMPVGCDGKTSGVVMIANFITQNTPAKKMSVKLDANTTVVFEEQAQ*
Ga0079217_116017751	3300006876	Agricultural Soil	MKHILASLVLLSAAHHASAACVNRFVVRNERPRQIVTLLTGKLTFQEAQTLAAAIEKKQAPPIEWVKEDGKPVAKQFGELKVVRPMPVGCDGKSSGVVLVATFASPSAPSKKMFVKLNADTTVT
Ga0075429_1000852943	3300006880	Populus Rhizosphere	MKIARLFLALSLVILGAQAASAECVNRFVVRTERPLQVVTFLTGKLTFQEAQALAAAIQKKQAPPLEWINDAGKSVAKQYGELKVVRPMPVGCDGKTSGVVLVAQFGSALTPSKKMLVKLNADTTVAFEEQAK*
Ga0075424_1000369063	3300006904	Populus Rhizosphere	MSKVRVTAVVFSLLAAQLAHGAVCVNRFVSRAEGPRQVVTLLTGKLTFQEAQALSKAIQQNQAPPLEWVNDSGKSMFKQVGELKVVRPMPVGCDGKTSGVVMIVTFVTQLKPSKKMNVKLDANTTVAFEQQATD*
Ga0075424_1006386162	3300006904	Populus Rhizosphere	MSKVRLASIALFLFAAAQLASGAQCVNKFVSTRQGVREVVTLLTGKLTFQEAQDLAKAIRDKQSPPLEWVDDTGKTISKQFGPLEVVRPMPVGCDGKTSGVVLIVSFPAATSPKKKMNVKIDAKTTVAFEQQ*
Ga0075424_1027547192	3300006904	Populus Rhizosphere	MSKARVSSAVVVLSFAVAQLAGAAQCVNKFVSTRQGVREVVTLLTGKLTFQEAQDLAKAIRDKQSPPLEWVDDGGKMISKQVGPLEVVRPMPVGCDGKTSGVVLIVSFPAATSPSKKMNVKIDAKTTVAFEQQ*
Ga0079216_102820612	3300006918	Agricultural Soil	MKIRFSTFVAACLLVANAASAACVNRFVNRTERPRQVVTLLTGKLTFQEAQALAASIQKKSSPPLEWVGEDGRTISKQFSELKVVRPMPVGCDGKTSGVVMIATFATSIVPSKKMLVKLNPETTVAFDQQAE*
Ga0079216_103931072	3300006918	Agricultural Soil	MKHILASLVLLSAAHHASAACVNRFVVRNERPRQIVTLLTGKLTFQEAQTLAAAIEKKQAPPIEWVKEDGKPVAKQFGELKVVRPMPVGCDGKSSGVVLVATFASPSAPSKKMFVKLNADTTVTFEEQSD*
Ga0079218_123603252	3300007004	Agricultural Soil	MSTVRVIAVAAAILLSAHAASAAQCVNRFVTRSEGPRQVVTLLTGKLTFQEAQALSKAINARQSPPLEWVNDEGKALYKQFGELKVVRPMPVGCDGKTSGVVMIVTFPTQIKPSKKMHVKISAETTVAFDQQAD*
Ga0105106_111375451	3300009078	Freshwater Sediment	AHVQAMSITSRLSAFVVACLLVANAASAACVNRFVNRTDRPRQIVTLLTGKLTFQEAQALSSSIQKKAAPPIEWVSEEGRTISKQFGELKVVRPMPVACDGKTSGVVMIATFATSVVPSKKMLVKLDPETTVTFDQQAE*
Ga0075418_125504471	3300009100	Populus Rhizosphere	MKRIILPLGLLLLSAHTASAACVNRFLARSEQPRQIVTLLTGKLTFQEAQTLAEAIRRKEAPGLEWVNDQGKIVAKQFGDLKIVRPMPVGCDGKPSGVVMVATFAAAVAPSKRMFVKLDANTTVQFDQQTD*
Ga0114129_102579452	3300009147	Populus Rhizosphere	MAAVAVLLLAAQFASGAVCVNRFVSRSEGPRQVVTLLSGKLTFQEAQALAKTIQSRQSPPLEWLDDGGKSIAKQIGELKVVRPMPVGCDGKTSGVVMIATFPTSIIPSKKMTVKLDASTTVVFEQQAQ*
Ga0114129_120425472	3300009147	Populus Rhizosphere	PRTVLTLLTGKLTFQEAQALAEAIKTKQAPPLEWVDESGKTVARQSGDLKVVRPMPVACDGKPSGVVMVAEFLTVITPPKKITVKLNPDTPVVFEQQAE*
Ga0114129_130450311	3300009147	Populus Rhizosphere	MPRRFNTLFALALAVGVLLAENASAAVCVNKFVVRRDKAVEQVVTLLTGKLTFQEAQELAKNINDKKSPPLEWVDDSGKTVAKQFGELKVVRPMPVGCDGKTSGVVIIVTFQTLSNPSKKMNV
Ga0111538_108562401	3300009156	Populus Rhizosphere	MSKFRVTVFVFAILMSAHVASAACVNRFVSRREGPRQIVTLLTGKMTFQEAQERAKSIQAKQTPPFEWVDENGKTVAKQFGELKVVRPMPVGCDGKSSGVVVIVTFPSALVPSKKLSVKF
Ga0105242_100042123	3300009176	Miscanthus Rhizosphere	MSAVAVVLFAAQVASGAVCVNRFVSRSEGPRQVVTLLTGKLTFQEAQQLAKTIQAKQSPPLEWVDDGGRQIAKQFGELKVVRPMPVGCDGKTSGVVMIVTFPTNVTPSKKMIVKLDANTQVAFEQQAD*
Ga0126310_106464441	3300010044	Serpentine Soil	MSMVRFAAAAALLLTAQLASAACVNRFVSRPEGNRQVVTLLTGKLTFQEAQALAKAIQAGQAPPLEWVSDAGKLLYKQVGELKVVRPMPVGCDTRTSGVVLIVNFVTQIKPSKKLNVKLDPNTIVAFEQQTD*
Ga0134122_103409341	3300010400	Terrestrial Soil	MKIRLAVAALALSVAASTASAACVNRFVARSERNQQVVTLLTGKLTFQEAQELTKRIEAGQAPRLEWVSDAGKSMGKQFGELKIVRPMPVGCDGKSSGVVMIVSFLAIQPPVKKMNVKLDADTLVAFDQQQ*
Ga0134123_1000137513	3300010403	Terrestrial Soil	MSMVRVAAVAAALLVAQAATAAQCVNRFVSRAEGPRQVVTLLTGKLTFQEAQALSKAIQANQAPPIEWVTENGKSLYKQMGELKVVRPMPVGCDGKTSGVVMIVTFPTQIKPTKKMHVKLDANTIVAFEQQAE*
Ga0134123_108799711	3300010403	Terrestrial Soil	MSTVRIIAVAALLFCAQAATAACVNKFVSRPEGARQVVTLLTGKLTFEEAQKLAEAIKANQAPPLEWVNEAGKSLYKQIGELKVVRPMPVGCDGKTSGVVLIVTFFAQTKPTKKMHVKFDANTI
Ga0137448_12387882	3300011427	Soil	MKSLRPLALLFVVLVAVEPASAACVNRFVARTERPKQIVTLLTGKLTFQEAQQLAEAIANKQAPPLEWVDDKGRALAKQWGDLKVVRPMPVGCDGKPSGVVIVATFASNSPPAKKMWVKLDADTTIE
Ga0137458_11478542	3300011436	Soil	MKSLRPLALLFVVLVAVEPASAACVNRFVARTERPKQIVTLLTGKLTFQEAQQLAEAIANKQAPPLEWVDDKGRALAKQWGDLKVVRPMPVGCDGKPSGVVIVATFASHI
Ga0137461_11722861	3300012040	Soil	MKIARTLTVLLLCTAAAGSAAAACVNRFVARTEGSRQVVTLLTGKLTFQEAQALAAAISKKQSPPLEWVTADGKVVAKQYGELKVVRPMPVGCDGKTSGVVMVASFASPVPPEKTMFVKLKSDETVAFEHQAD*
Ga0137379_117174071	3300012209	Vadose Zone Soil	PRISFAIALSLLVVNAASAACVNKFVSRAEGGRQVVTLLTGKLTFQEAQALAAAIHANTAPPVEWVDDKGKAIARQFGELKVVRPMPVGCDGKTSGVVLIVMFQTFAQPAHLMHIRIDPNTTIDFEQQ*
Ga0136633_11284572	3300012527	Polar Desert Sand	MNTIRTIAMLLLAFGTADASAACMNRFIARSERPRQIVTLLTGKLTFQEAQALATAVNSKKAPGLEWVTADGTRVARQMGGLKIVRPMPVGCDGKASGVIMIVTFGPMAAPPMSQMFVKFDAVTTVAFEQQTQ*
Ga0157296_103242671	3300012905	Soil	MTINFKRALLVAALSASITGTASAACVNRFVSRMERQMQVVTLLTGKITFQEAQTLAADIKSRKVPPMEWVDDTGKLIARQFGELKVVRPMPVGCDGKASGVVVIASFATANAPSKKMTVKLTPEATVDFE
Ga0163162_106782922	3300013306	Switchgrass Rhizosphere	MPKARFAVVSVLLLLVAQLASGASCVNRFVSRKEGPRQMVTLLTGKLTFQEAQALAKAITAKQSPPIEWVDDSGKPVAKQMGALNVVRPMPVGCDGKTSGVVMIVTFATMSSPAKKINIKLDANTTVAFEEQAQ*
Ga0157380_120665712	3300014326	Switchgrass Rhizosphere	MSIKIRFSASVAACLLVANVASAACVNRFVSRTERPRQVVTLLTGKLTFQEAQALAAAINKKASPPVECVGEDGKSISKQFGELKVVRPMPVGCDGKTSGVVMIVTFATSTIPAKKMLVKLDAETTVAFDQQA
Ga0157377_104221551	3300014745	Miscanthus Rhizosphere	MRLTSVLLASLLVAEAASAACVNRFVATSKGTQQTVTLLTGKLTFQEAQELAKKIKDGSAPRLEWVDDSGKSISRQVGELRVVRPMPVGCDGKTSGVVVVASFLSVHPPAKKMNVKLDAQTTVAFEQQQ*
Ga0157377_116955021	3300014745	Miscanthus Rhizosphere	QVASGAQCVNRFVATRQGVRHVVTLLTGKLTFQEAQQLAKAIQAKQSPPLEWVDDSGKSIAKQSGMLEVVRPMPVGCDGKTSGVVMIVNFATASAPAKKMNLKLNADTTVAFEEQGK*
Ga0180074_10034692	3300014877	Soil	MKITRAVLVLSALVLSAQAASAACVNRFVVRTERPLQVVTLLTGKLTFQEAQELATAIQKKQSPGLEWINDAGKSLAKQYGELKVVRPMPVGCDGKTSGVVIVAQFGSSLPPSKKMRVKLNADTTVDFEEQAK*
Ga0184637_107322992	3300018063	Groundwater Sediment	LNRSQGSQQSVTLLTGKLTYQEAYALAKAIKEGQAPPVEWISASGKLIAKQHGDLKVVRPMPVGCDGKTSGVIMVATFMSVQKPIRKMSVKLDANTTVAFEEQAQ
Ga0190272_1000000281	3300018429	Soil	MKQISLATLLALALSAHDASAACVNRFMVRWERPRQIVTLLTGKLTFQEAQALAEAISKKTAPPLEWVREDGKTMARQFGDLKVVRPMPVGCDGKASGVVMVVSFGSPSTPAKKMFVKLNADTTVAFEEQN
Ga0190275_100283482	3300018432	Soil	MKTLLAATGRLSVLALVLLYTDAASAVECVNRFVSRTQRPHQVITLLTGKFTFQEAQELAKKMNAGQAPLFEWVNDQGKLIAKQTGELKVVRPMSVGCDGKKSGVMVIASFLSVQSPSKKMFVKLDANTTVEFVQQAD
Ga0190275_126935041	3300018432	Soil	PMKTRLAVSALVCLFAADAATAACVNRFVSRTERPRQVVTLLTGTLTFQEAQALAASIQKKEAPPLEWIGDDGRVISRQFGDLKVVRPMPVGCDGKTSGVVMIVNFATGATPSKKMLVKLNADTTVAFDQQAD
Ga0190269_100085963	3300018465	Soil	MIMRVATAILVSLLAADVASAACVNRFVTRSEKAQQIVTLLTGKLTFQEAQDLAAKIKAGQSPRLEWVDDSGKVISKMVGDLKVVRPMPVGCDGKSSGVVIVATFLSVHPPSKKMNVKLDASTTVAFEQQQ
Ga0190268_104141092	3300018466	Soil	MKHILATIVLLSAAHHASAACVNRFVVRNERPRQIVTLLTGKLTFQEAQTLSAAIEKKQAPPIEWVKEDGKPVAKQFGELKVVRPMPVGCDGKSSGVVLVATFASPSAPSKKMFVKLNADTTVTFEEQAD
Ga0190268_115314931	3300018466	Soil	LATLLALTFAAHDASAACVNRFMVRWERPRQIVTLLTGKLTFQEAQALAEAITKKTAPPLEWVREDGKTLARQYGDLKVVRPMPVGCDGKASGVVLVVSFASPSTPAKKMFVKLNPETTVAFEEQSN
Ga0190270_10000008147	3300018469	Soil	MRLTSLLVVCLLAAETASAACVNRFVNRTARPYQVVTLLTGKLTFQEAQELAAKISKNQAPPLEWVSDSGKTIAKQYGELKVMRPMPVGCDGKSSGVVMIATFPSAQSPSKKMFVKLDADTVVEFEQQP
Ga0193609_10261642	3300018906	Soil	MVTRLRILSLVLAAALFSSSASAAVCVNRFLARSERTQQVVTLLTGKLTFQEAQALAAAIRDKKSPAMEWVDDSGKTLARQFGEVKIVRPMPVGCDGKTSGVVMIVTFGTPQVPSKKMNVRLDAKTTVAFDQQSE
Ga0196977_100003848	3300020146	Soil	MRTLIVSALTSFLVANAASAACVNRFVVRTERPLQVVTLLTGKLTFQEAQSLAAAISKKQAPPLEWVNEDGKIVAKQYGELKVVRPMPVGCDGKTSGVVMVVSFGSSLPPSKKMHVKIDGDTTVAFDQQDN
Ga0196958_100034323	3300020181	Soil	MNSRILLAALALAAFAHAASAACVNRFVARTERPHQVVTLLTGKLTFQEAQALATSIGKKEAAPLEWVDDSGKTLAKQFGELKVVRPMPVGCDGKASGVVMIVSFPAASTPTKKMNVKLNANTTVAFEQQAN
Ga0196958_104341041	3300020181	Soil	MRIVAATALALFVAHSASAACVNRFVSRTEKTQQIVTLLTGKLTFQEAQELAKKVSSGDAPRLEWVNENGKVIAKQVGELKVVRPMPVGCDGKSSGVVMIATFFGMQAPTKKMLVKINADTTVAFDQQAD
Ga0196963_104450961	3300020215	Soil	MRIRFAAAALALFAVADIASAAACVNRFVSRTQRPHQIVTLLTGKLTFQEAQDLAKKIEAGEAPRLEWVNESGKAIAKQMGELKVVRPMPVGCDGKTSGVVMIASFLSVHPPTKKMHVKLDEKTVVEFEQQE
Ga0196963_104778781	3300020215	Soil	AACVNRFVVRTERPLQIVTLLTGKLTFQEAQALATAIREKQAPPLEWVSPEGKSIAKQFGDLKVVRPMPVGCDGKTSGVVIVAQFGSSLPPSKKMLVKLNADTTVTFDEQAGN
Ga0213903_1044521	3300021289	Soil	CIWVRLCRKPLPTMSIKIRFSAFVAACLLVANAASAACVNRFVSRTERPRQVVTLLTGKLTFQEAQALAAAINKKASPPVEWVGDDGKSISKQFGELKVVRPMPVGCDGKTSGVVMIVTFATSTIPAKKMIVKLNPETTVAFDQQAE
Ga0213873_100000011155	3300021358	Rhizosphere	MKIAAFLLALCLFAQSLPAACVNRFVSRTERHIQVVTLLTGRLTFQEAQLLADTIGKRQAPPLEWVDDHGKTIAKQFGDLKVVRPMPVGCDGKSSGVVLIAWFATAIVPSKKIMVKVDANTTIAFEQQ
Ga0213876_100046031	3300021384	Plant Roots	MPTTRLQQFALAVVLSALAARTASAACVNRFLARQEGPRQVITLLTGKLTFQEAQALMQNIKDKKAPPLAWVDAKGRVVATQFGDLKIVRPMPVGCDGRSSGVVLIVTFGASFTPTKELLVKLDDATTVSFEQQANQ
Ga0193698_10015252	3300021968	Soil	MKIRLSAAVLACLLAANIASAACVNRFVSRTERPRQVVTLLTGKLTFQEAQALAASIQKKTSPPIEWVSADGKTISKQFGELKVVRPMPVACDGKSSGVVMIVSFATSLIPSKAMLVKLDAGTTVTFDQQAD
Ga0247791_10135081	3300023062	Soil	LSMRLVPAALLVSLLVADAASAACLNRFVARTERNTQQVVTLLTGKLTFQEAQELAAKIQSGASPRLEWVDDSGKPISKQVGELKVVRPMPVGCDGKSSGVVIVATFLSVHPPSKKMNVKIDATTTVAFEQQP
Ga0247748_10570211	3300023168	Soil	MRLVPAALLVSLLVADAASAACLNRFVARTERNTQQVVTLLTGKLTFQEAQELAAKIQSGASPRLEWVDDSGKPISKQVGELKVVRPMPVGCDGKSSGVVIVATFLSVHPPSKKMNVKIDATTTVAFEQQP
Ga0196960_100079804	3300024426	Soil	MRLTSLFVVCLLAAETASAACVNRFVNRTARPHQVVTLLTGKLTFQEAQELAANINKGQAPPLEWVNAAGKSVAKQYGELKVVRPMPVGCDGKSSGVVMIASFPSANPPSKTMLVKLDANTTVEFEQQP
Ga0209002_104924381	3300025289	Soil	MKIVRTLAALSVLLLSAHAASAACVNKFVVRTERPLQVVTLLTGKLTFQEATDLAVSIQKKQAPPFEWLNPDGKTYAKQYGDLKVVRPMPVGCDGKSSGVVIVAQFGSALPPAKA
Ga0209640_105808382	3300025324	Soil	MKTLRPLALLFAVLVAVETASAACVNRFVARTERPKQVVTLLTGKLTFQEAQQLAEAIAKKQAPPLEWVDDKGKAVAKQFGDLKVVRPMPVGCDGKPSGVVMVATFASNSPPAKKMWVKLDAD
Ga0207655_11754641	3300025728	Miscanthus Rhizosphere	MSISRLTAVAVLLLGAQVASGAQCVNRFVATRQGVRHVVTLLTGKLTFQEAQQLAKAIQAKQSPPLEWVDDSGKSIAKQSGMLEVVRPMPVGCDGKTSGVVMIVNFATASAPAKKMNLKLNADTTVAFE
Ga0207662_100081542	3300025918	Switchgrass Rhizosphere	MKIRIAVAALALSIAAGTASAACMNRFVVRSDGNQQVVTLLTGKLTFQEAQELAKKISDGQAPGLEWTNDSGKTISRQTGELKVVRPMPVGCDSKPSGVVIIARFLAVQPPSKKMNVKLDANTTVAFDEQP
Ga0207659_10000002254	3300025926	Miscanthus Rhizosphere	MSISRLTAVAVLLLGAQVASGAQCVNRFVATRQGVRHVVTLLTGKLTFQEAQQLAKAIQAKQSPPLEWVDDSGKSIAKQSGMLEVVRPMPVGCDGKTSGVVMIVNFATASAPAKKMNLKLNADTTVAFEEQGK
Ga0207686_100047003	3300025934	Miscanthus Rhizosphere	MPTVRMSAVAVVLFAAQVASGAVCVNRFVSRSEGPRQVVTLLTGKLTFQEAQQLAKTIQAKQSPPLEWVDDGGRQIAKQFGELKVVRPMPVGCDGKTSGVVMIVTFPTNVTPSKKMIVKLDANTQVAFEQQAD
Ga0207670_114686061	3300025936	Switchgrass Rhizosphere	IRTSAAALLIAFAAHRASAACVNRFVVRNERPRQIVTLLTGKLTFQEAQVLAASIQKKDAAPLEWVTEDGKSVAKQFGDLKVVRPMPVGCDGKASGVIIVATFASTTPPAKKMFVKLSPTNTVAFDEQAGE
Ga0207689_109908931	3300025942	Miscanthus Rhizosphere	FMNAIRTSAALLLLTFAAQGASAACVNRFVARTERPKQIVTLLTGKLTFQEAQALADAINKKQAPPLEWVTEDNKSVAKQFGELKIVRPMPVGCDGKTSGVVMVATFGSSVAPVMKALSSAAR
Ga0207708_1000003565	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MSTARIFVVAAVLVCAQAATAAQCVNRFISRAEGPRQVVTLLTGKLTFQEAQALSKAIQSRTAPPLEWVNDAGKTLYKQIGELKVLRPMPVACDGKPSGVVMVVTFPTQIKPTKKMRVKLDANTIVEFEQQAD
Ga0207648_120375781	3300026089	Miscanthus Rhizosphere	MSIVRLTAVAVLLLGAQIASGAQCVNRFVSTRQGVRNNVTLLTGKLTFQEAQQLAKAIQGKQSPPLEWVDDAGKLIAKQSGPLEVVRPMPVGCDGKTSGVVMIVTFNTANTPAKKLNLKLDAKTTVAFEEQGK
Ga0209347_10122453	3300027640	Deep Subsurface	MRTALFASLVALTVAGSASAACMNKFVARSERPHQVVTLLTGKLTFQEAQALAAAIQKKQAPPVQWVDANGRTISSQFGELKVVRPMPVGCDGRASGVVVIATFPNAVPPVRKMMVKLGDDNVVEFEEQQ
Ga0209486_108994001	3300027886	Agricultural Soil	MSTVRVIAVAVAVLLSAHAASAAQCVNRFVTRSEGPRQVVTLLTGKLTFQEAQALAKAINARQSPPLEWVNDEGKALYKQFGELKVVRPMPVGCDGKTSGVVVIVTFPTQIKPSKKMNVKLNADTTVAFEQQAD
Ga0207428_1000000166	3300027907	Populus Rhizosphere	MSIKIRFSASVAACLLVANVASAACVNRFVSRTERPRQVVTLLTGKLTFQEAQALAAAINKKASPPVEWVGDDGKTISKQFGELKVVRPMPVGCDGKTSGVVMIVTFATSVIPTKKMLVKLDAETTVAFDQQAE
Ga0209382_100192913	3300027909	Populus Rhizosphere	MKIARLFLALSLVILGAQAASAECVNRFVVRTERPLQVVTFLTGKLTFQEAQALAAAIQKKQAPPLEWINDAGKSVAKQYGELKVVRPMPVGCDGKTSGVVLVAQFGSALTPSKKMLVKLNADTTVTFEEQAK
Ga0209382_112323532	3300027909	Populus Rhizosphere	MIKRLSFTASVLLLIVGANPASAACVNRFVSRTERPRQVLTLLTGKLTFQEAQALAEAIKTKQAPPLEWVDQNGKTVARQAGDLKVVRPMPVACDGKPSGVVMVVDFLTVITPEKKITVKLNPDTPVVFEQQSE
Ga0272482_100467772	3300028578	Soil	MKLAAATALALLLADAASAACVNRFVARSEKNQQTVTLLTGKLTFQEAQELAKKMNSGEVPRLEWVSEAGKPIAKQVGELKVVRPMPVGCDGKTSGVVLIASFFAVHPPSKKMHVKIDADTTVAFDQQAE
Ga0307502_100192124	3300031164	Soil	MNMRLALSAFVCLLAANAADAACVNRFVSRTERPRQVVTLLTGKLTFQEAQALASSIQKKDSAPLEWLGDDGKVVAKQFGELKIVRPMPVGCDGKTSGVVMIVNFATSSTPQKKMLVKLNADTTVAFEQQAE
Ga0307502_100279112	3300031164	Soil	MKQISVATVLALALSAGSASAACVNRFVVRSERPRQIVTLLTGKLTFQEAQVLADAIIKKTAPPLEWVREDGKSVAKQFGDLKVVRPMPVGCDGKTSGVVLVASFASGVPPAKKMFVKLNADTTVAFEEQSE
Ga0307505_100064473	3300031455	Soil	MKIARTLTLLFLCTGAAASASAACVNRFMARAEGPRQVVTLLTGKLTFQEAQALAAAITKKQLPPLEWVTAEGKIVAKQYGELKVVRPMPVGCDGKTSGVVIVATFASPVPPEKTMFVKLKPDTTVAFDQQAE
Ga0310888_106619071	3300031538	Soil	MKIARTLAALSVAVLCAQAASAACVNRFVVRTERPLQVVTLLTGKLTFQEAQALATAIAKKQAPPLEWVTPDGKSVAKQYGDLRVVRPMPVGCDGKSSGVVIIAQFGSSLAPSKQMLVKLNPDTTVTFDEQGD
Ga0307405_115273161	3300031731	Rhizosphere	MKTRLALSALVCLLAAHAATAACVNRFVSRTDGPRLVVTLLTGKLTFQEAQTLAILIQKREAAPLEWLNEQGKSIARQFGELKVVRPMPVGCDGKTSGVVMIVSFPTSSRPSKKMIVKLNADTTVAFDQQDE
Ga0307468_1015203352	3300031740	Hardwood Forest Soil	MSIKIRFSASVAACLLVANVASAACVNRFVSRTERPRQVVTLLTGKLTFQEAQALAAAINKKASPPVEWVGDDGKTISKQFGELKVVRPMPVGCDGKTSGVVMIVTFATSAIPAKKMLVKLNPEMTVAFDQQAE
Ga0307416_1010248142	3300032002	Rhizosphere	MKHRLVLISLATILAADVASAANCVNRFVSRPQRSAQQVTLLTGKLSFQEAQTLAERIKAGEAPRLEWVNDSGKPVGKQVGDLKVVRPMPVGCDGKTSGVVMIANFLAVQPPSKKMNVKLDADTTVEFDEQAN
Ga0307416_1031900181	3300032002	Rhizosphere	MKILRTLAALSVAVLSAHAASAACVNKFVVRTERPLQVVTLLTGKLTFQEATDLAAAISKKQAPPVEWLLTDGKTHAKQYGDLKVVRPMPVGCDGKSSGVVLVATFLSVHPPAKKMNVKLDANTT
Ga0307411_117234081	3300032005	Rhizosphere	MVLLRFAVAAIALSTLSAPLHAACMNKFTNRTEGPRQVTTLLTGKMTFQEAQALAEQITQQKAPPFEWVGDDGKVISRQFGQLKVVRPMPVGCDGKASGVIVIATFVTPQKPVGKMNVKLDP
Ga0310902_105434642	3300032012	Soil	IGRCLQLSMRFVPVLLATSLLVADAASAACMNRFVATSKGSQQVVTLLTGKMTFQEAQELSTKIKDGSAARLEWVDEGGKTLSKQTGELKVVRPMPVGCDGKSSGVVVVATFLSTRAPEKKMNVKLDSSTTVAFEQQ
Ga0334942_001268_2094_2492	3300034008	Biocrust	MKHVSVAVLLALALFARSASAACVNRFVVRTERPLQIVTLLTGMLTFQEAQELAGAIAKKQAPPLEWVREDGKSVAKQYGDLKVVRPMPVGCDGKKSGVVIVASFGSTIPPAKKMFVKLNPDTTVTFEAQSE
Ga0334956_000134_8077_8490	3300034139	Biocrust	MKSRLVLSSAVSLAVLALSAVPADAAVCVNKFLRRAEGTRQVVTLLSGKLTFQEATALSQQISARTAPPIEWVDDKGKTIARQFGELKVVRPMPVGCDGKTSGVVATVVFATGATPSKKMHIKLDANTTVVFDEQTD
Ga0334963_000432_4003_4398	3300034145	Sub-Biocrust Soil	MRLAAPVLLASLLAADVASAAACMNRFVATSKGPQQVVTLLTGKLTFQEAQELSKKIKDGSAPKLEWVDESGKAISKQAGELKVVRPMPVGCDGKSSGVVVVATFLSLKPPVKKMNVKLDATTTVAFEQQP
Ga0334964_000024_88664_89074	3300034146	Sub-Biocrust Soil	MIKATRLALVLSFAVLVADAASAACVNRFVARTERGRPHQILTLLTGKLTFQEAQALAKAIQAKSAPPLEIVDARGKVVARQFGELKVVRPMPVGCDGKTSGVVIVATFPLVTVPSGKTLVKLDANTTVEFEEQKD
Ga0370499_0057389_14_412	3300034194	Untreated Peat Soil	MKIRLAATALSCLLAANVASAACVNRFVSRAERPRQVVTLLTGKLTFQEAQALSAAIQKQTSPPLEWVDDKGKAIAKQFGELKVVRPMPVGCDGKTSGVVMIVAFATFSSPEKKMLVKLDPNTTVAFDQQAE
Ga0334937_206134_64_453	3300034221	Biocrust	MRTATAALVCLLLADAASAACVNRFVTRSEKSQQVVTLLTGKLTFQEAQELAAKIKAGQSQRLEWVDENGKAISKQVGDLKVVRPMPVGCDGKSSGVVVVATFLSIHPPTKKMNVKLDANTTVAFEQQP
Ga0334931_117406_255_626	3300034377	Sub-Biocrust Soil	MRLATALLASLLAADAASAACVNRFVNKTERPHQVVTLLTGKLTFQEAQALAEAIAKKQAAPLEWVDDNGKPIARQFAELKVVRPMPVGCDGKASGVVLIVRFPSSTTPAKKMNVKLNAQTTVS
Ga0334948_003358_1027_1416	3300034760	Sub-Biocrust Soil	MRLPLLTLLSLLVVDHASAACVNRFVNRTDRRHQVVTLLTGKLTFQEAQELAAKIKKNQAPPLEWVSDSGKLVAKQNGELKVMRPMPVGCDGKSSGVVMIASFLSVHPPSKKMFVKLDGDTTVEFEQQQ
Ga0334935_005395_1923_2312	3300034781	Biocrust	MRLIAAVLTSLFVADAAHAACVNRFMARSERAQQVVTLLTGKLTFQEAQDLAAKIKANQAPRLEWVGDDGKTLSKQVGDLKVVRPMPVGCDGKSSGVVVVATFLSIKTPVKKMNVKLDANTTVAFEQQP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081525

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences