Metagenome Family F081483

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081483
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	89 residues
Representative Sequence	DDGVRVENVCGPEDLNGMVLAYRIGKRYRAVPLPLWWPAVAVCLKALHKLGFAVVKPDQLTRLIGEKTGTAASARTTPEGVRRFLAN
Number of Associated Samples	89
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.25 %
% of genes from short scaffolds (< 2000 bps)	92.11 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.860 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.403 % of family members)
Environment Ontology (ENVO)	Unclassified (48.246 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (78.947 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.26% β-sheet: 0.00% Coil/Unstructured: 61.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF05257	CHAP	4.39
PF13620	CarboxypepD_reg	3.51
PF00270	DEAD	3.51
PF01471	PG_binding_1	2.63
PF00704	Glyco_hydro_18	1.75
PF12681	Glyoxalase_2	1.75
PF00884	Sulfatase	1.75
PF04402	SIMPL	1.75
PF00710	Asparaginase	0.88
PF01370	Epimerase	0.88
PF04185	Phosphoesterase	0.88
PF12142	PPO1_DWL	0.88
PF13505	OMP_b-brl	0.88
PF00933	Glyco_hydro_3	0.88
PF01872	RibD_C	0.88
PF13380	CoA_binding_2	0.88
PF13304	AAA_21	0.88
PF14106	DUF4279	0.88
PF01435	Peptidase_M48	0.88
PF13594	Obsolete Pfam Family	0.88
PF13302	Acetyltransf_3	0.88
PF13646	HEAT_2	0.88
PF00696	AA_kinase	0.88
PF08281	Sigma70_r4_2	0.88
PF02446	Glyco_hydro_77	0.88
PF06725	3D	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	Translation, ribosomal structure and biogenesis [J]	1.75
COG2859	Outer membrane channel-forming protein BP26/OMP28, SIMPL family	Cell wall/membrane/envelope biogenesis [M]	1.75
COG2968	Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain	Function unknown [S]	1.75
COG3471	Predicted secreted (periplasmic) protein	Function unknown [S]	1.75
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.88
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.88
COG1640	4-alpha-glucanotransferase	Carbohydrate transport and metabolism [G]	0.88
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.88
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.86 %
Unclassified	root	N/A	6.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.86 %
Unclassified	root	N/A	6.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.86 %
Unclassified	root	N/A	6.14 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	14.91 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	7.02 %
Unclassified	root	N/A	6.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.39 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	4.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.51 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.89 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	7.02 %
Unclassified	root	N/A	6.14 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4.39 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.63 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.75 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.75 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.88 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.89 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	7.02 %
Unclassified	root	N/A	6.14 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4.39 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.63 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	1.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.75 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.88 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.88 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.88 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.89 %
Unclassified	root	N/A	6.14 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	4.39 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4.39 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.63 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	1.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.75 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.88 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.88 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.88 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.88 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.89 %
Unclassified	root	N/A	6.14 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	4.39 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4.39 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.63 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	1.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.75 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.88 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.88 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.88 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.88 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.89 %
Unclassified	root	N/A	6.14 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	4.39 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4.39 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.63 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.75 %
Azospirillum baldaniorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum baldaniorum	0.88 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.88 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.88 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.88 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.89 %
Unclassified	root	N/A	6.14 %
Paraflavitalea	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Paraflavitalea	4.39 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4.39 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.63 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.75 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.88 %
Azospirillum baldaniorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum baldaniorum	0.88 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.88 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.88 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.89 %
Unclassified	root	N/A	6.14 %
Paraflavitalea soli	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Paraflavitalea → Paraflavitalea soli	4.39 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4.39 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.63 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.75 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.88 %
Azospirillum baldaniorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum baldaniorum	0.88 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.88 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.88 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908027\|MRS2a_Contig_27058	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
2162886013\|SwBSRL2_contig_455242	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300002100\|JGI24809J26612_1005254	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	3463	Open in IMG/M
3300002899\|JGIcombinedJ43975_10091043	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300003322\|rootL2_10034637	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300003993\|Ga0055468_10120793	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300004013\|Ga0055465_10273854	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300004157\|Ga0062590_101378637	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300004479\|Ga0062595_100423831	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300005093\|Ga0062594_101062592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300005288\|Ga0065714_10405979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum baldaniorum	586	Open in IMG/M
3300005293\|Ga0065715_11137593	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005294\|Ga0065705_10128713	All Organisms → cellular organisms → Bacteria	2551	Open in IMG/M
3300005294\|Ga0065705_10656006	Not Available	675	Open in IMG/M
3300005331\|Ga0070670_100281608	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1452	Open in IMG/M
3300005331\|Ga0070670_100640789	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300005334\|Ga0068869_101854798	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005345\|Ga0070692_10308074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300005366\|Ga0070659_101157191	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300005440\|Ga0070705_100830011	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300005440\|Ga0070705_101634003	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300005444\|Ga0070694_100994037	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300005444\|Ga0070694_101122035	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300005468\|Ga0070707_100845320	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	879	Open in IMG/M
3300005518\|Ga0070699_100104788	All Organisms → cellular organisms → Bacteria	2480	Open in IMG/M
3300005545\|Ga0070695_100157998	All Organisms → cellular organisms → Bacteria → Acidobacteria	1589	Open in IMG/M
3300005546\|Ga0070696_100598776	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300005546\|Ga0070696_100635355	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	864	Open in IMG/M
3300005546\|Ga0070696_101563057	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300005564\|Ga0070664_101801078	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005577\|Ga0068857_100627387	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1017	Open in IMG/M
3300005577\|Ga0068857_101879319	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005617\|Ga0068859_100088094	All Organisms → cellular organisms → Bacteria → Acidobacteria	3153	Open in IMG/M
3300005617\|Ga0068859_100448815	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300005617\|Ga0068859_100541685	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300005617\|Ga0068859_102292329	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005618\|Ga0068864_102034205	Not Available	581	Open in IMG/M
3300005841\|Ga0068863_100419053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1311	Open in IMG/M
3300005843\|Ga0068860_100421623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1323	Open in IMG/M
3300006237\|Ga0097621_100226631	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1630	Open in IMG/M
3300006845\|Ga0075421_100191819	All Organisms → cellular organisms → Bacteria	2534	Open in IMG/M
3300006853\|Ga0075420_100909432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	757	Open in IMG/M
3300006853\|Ga0075420_101141518	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300006854\|Ga0075425_100606781	All Organisms → cellular organisms → Bacteria → Acidobacteria	1258	Open in IMG/M
3300006880\|Ga0075429_100874677	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300006904\|Ga0075424_100993833	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300006969\|Ga0075419_10064242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2318	Open in IMG/M
3300006969\|Ga0075419_10156907	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300009011\|Ga0105251_10192074	Not Available	920	Open in IMG/M
3300009100\|Ga0075418_12181907	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300009101\|Ga0105247_10383146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	997	Open in IMG/M
3300009101\|Ga0105247_10474373	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Paraflavitalea → Paraflavitalea soli	907	Open in IMG/M
3300009101\|Ga0105247_10945578	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300009147\|Ga0114129_12384950	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300009148\|Ga0105243_10361153	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300009148\|Ga0105243_11379813	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300009162\|Ga0075423_11032178	Not Available	874	Open in IMG/M
3300009162\|Ga0075423_12820847	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	532	Open in IMG/M
3300009174\|Ga0105241_10904295	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300009177\|Ga0105248_11296114	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300009177\|Ga0105248_12690431	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300009177\|Ga0105248_13226005	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300009551\|Ga0105238_10585185	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300009789\|Ga0126307_10860241	Not Available	732	Open in IMG/M
3300010036\|Ga0126305_10853618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300010037\|Ga0126304_10907890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300010042\|Ga0126314_11323388	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300010044\|Ga0126310_11375601	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300010047\|Ga0126382_11741298	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300010397\|Ga0134124_10194497	All Organisms → cellular organisms → Bacteria	1838	Open in IMG/M
3300010397\|Ga0134124_11401368	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300010397\|Ga0134124_13219102	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300010403\|Ga0134123_10037467	All Organisms → cellular organisms → Bacteria	3574	Open in IMG/M
3300010403\|Ga0134123_13489366	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300012960\|Ga0164301_10201982	All Organisms → cellular organisms → Bacteria → Acidobacteria	1268	Open in IMG/M
3300012986\|Ga0164304_11729310	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300012987\|Ga0164307_11615996	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300013100\|Ga0157373_10495354	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	882	Open in IMG/M
3300013296\|Ga0157374_12553453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300013297\|Ga0157378_11382260	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300013306\|Ga0163162_10844416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1031	Open in IMG/M
3300013307\|Ga0157372_12122812	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300013308\|Ga0157375_11657371	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300014325\|Ga0163163_10438455	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Paraflavitalea → Paraflavitalea soli	1366	Open in IMG/M
3300014325\|Ga0163163_12579285	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300014326\|Ga0157380_12498572	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300014745\|Ga0157377_10545710	Not Available	818	Open in IMG/M
3300015372\|Ga0132256_101012787	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300015372\|Ga0132256_102940596	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300015373\|Ga0132257_100773889	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300015374\|Ga0132255_103813689	Not Available	640	Open in IMG/M
3300017792\|Ga0163161_11684110	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300018476\|Ga0190274_12446153	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300025735\|Ga0207713_1174189	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300025900\|Ga0207710_10039207	All Organisms → cellular organisms → Bacteria	2096	Open in IMG/M
3300025911\|Ga0207654_10397450	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Paraflavitalea → Paraflavitalea soli	958	Open in IMG/M
3300025911\|Ga0207654_11411355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	508	Open in IMG/M
3300025918\|Ga0207662_10315208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300025922\|Ga0207646_10966513	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	754	Open in IMG/M
3300025924\|Ga0207694_10361061	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300025927\|Ga0207687_11196067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	653	Open in IMG/M
3300025934\|Ga0207686_10072996	All Organisms → cellular organisms → Bacteria	2213	Open in IMG/M
3300025935\|Ga0207709_11345560	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300025941\|Ga0207711_10645455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	987	Open in IMG/M
3300025942\|Ga0207689_10616766	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Paraflavitalea → Paraflavitalea soli	913	Open in IMG/M
3300025942\|Ga0207689_11557344	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300025945\|Ga0207679_10851811	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Paraflavitalea → Paraflavitalea soli	832	Open in IMG/M
3300025960\|Ga0207651_10205391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1582	Open in IMG/M
3300026095\|Ga0207676_10364175	All Organisms → cellular organisms → Bacteria → Acidobacteria	1341	Open in IMG/M
3300026116\|Ga0207674_12271151	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300027909\|Ga0209382_10474397	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1382	Open in IMG/M
3300028381\|Ga0268264_12511950	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300030496\|Ga0268240_10201956	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300032126\|Ga0307415_101058878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	757	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	65.79%
Environmental	Environmental	34.21%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	65.79%
Terrestrial	Environmental → Terrestrial	32.46%
Aquatic	Environmental → Aquatic	1.75%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	42.98%
Soil	Environmental → Terrestrial → Soil	32.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.30%
Roots	Host-Associated → Plants → Roots	2.63%
Marine	Environmental → Aquatic → Marine	1.75%
Rhizome	Host-Associated → Plants → Rhizome	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	35.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.91%
Loam	Environmental → Terrestrial → Soil → Loam	11.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.39%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.63%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.75%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	35.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.39%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.63%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	8.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.39%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.39%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.51%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.63%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.88%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908027	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300002100	Soil microbial communities from Manhattan, Kansas, USA - Sample 500um MDA	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300025735	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MRS2a_00452420	2124908027	Miscanthus Rhizosphere	ENVCGPEDLNGMVLAYRICKRYRAVPLPLWWPAVAVGLKALHKMGLGIVKPDQLTRLIGEKTGTAASAKTTLERVRRFPAS
SwBSRL2_0248.00001970	2162886013	Switchgrass Rhizosphere	CGPEDLSGIALSYRIAKHYRALPLPLWWPTVAVALKALHKLGFAVVKPDQLPRLISEKTGTAASPRNTSTATRRFPAN
JGI24809J26612_10052545	3300002100	Soil	QLIQQHDNGVRIETVSGPEDLSGMELANRIGKRYRALPLPMWWPVVAVGLKALHKLGFEVVKPDQLTRLIGEKTGTAANARSHSATVKRFPAH*
JGIcombinedJ43975_100910431	3300002899	Soil	IQQHNTGVRIETICGPEDLNGIELAGRISKHYRALPLPLWWPAVSISLKTLQKLGWAIVKPDQLTRLTGDKTGNAASRDLTSEELRRFPAN*
rootL2_100346372	3300003322	Sugarcane Root And Bulk Soil	MHVDDFTRRAAELIQQHQNGVRIETICGPEDLNGIELASRIGKHYRALPLPLWWPAVSISLKVLQKLGLAIVKPDQLTRLTGRKTGSAVKTEARRFPGDS*
Ga0055468_101207931	3300003993	Natural And Restored Wetlands	DDGVRVENVCGPEDLNGMVLAYRIGKRYRAVPLPLWWPAVAVCLKALHKLGFAVVKPDQLTRLIGEKTGTAASARTTPEGVRRFLAN*
Ga0055465_102738542	3300004013	Natural And Restored Wetlands	GPEDLSGMVLAYRIGRRYRAVPLPLWWPAVAVGLKALHKIGIAIVKPDQLARLVGDKTATAASAMPTKRRVRSFLSLSTDYAD*
Ga0062590_1013786371	3300004157	Soil	FAPMHVDDFTRLAVELIQQHNHGVRIETLCGPEDLNGIELAQRISKHYRALPLPLWWPAVSISLKTLQKLGWAIVKPDQLTRLTGDKTGNAASRDLTSEELRRFPAT*
Ga0062595_1004238311	3300004479	Soil	AELIQQHQDGTRIENMCGPEDLSGMRLAYRICKSYRAVPLPLWWPALAICLRALNKLGFAIVKPDQLPRLVCKKTATAKSARGREKTRAFLIN*
Ga0062594_1010625921	3300005093	Soil	PEDLSGMELANRIAKHHRALPLPLWWPAVSLSLKALDKLGLRIVKPDQLPRLIGEKTGTASSANATPKSVRRFL*
Ga0065714_104059791	3300005288	Miscanthus Rhizosphere	DDFSVLAAELIEQHYDGVRIEDVCGPEDLSGVALASRISKHYRALPFPLWWPAVNISLKALQKIGWSIVKPDQLTRLTGKKTGTAATPERGRRFLAD*
Ga0065715_111375931	3300005293	Miscanthus Rhizosphere	QHHDGVRIENVCGPEDLSGVALASRISKHYRALPFPLWWPAVNISLKALQKIGWSIVKPDQLTRLTGKKTGTAATPERGRRFLAD*
Ga0065705_101287133	3300005294	Switchgrass Rhizosphere	MHVDDFSRVASELIQQHHEGVRIENICGPEDLSGIALSYRIAKHYRALPLPLWWPTVAVALKALHKLGFAVVKPDQLPRLISEKTGTAASPRSTSTATRRFPAN*
Ga0065705_106560062	3300005294	Switchgrass Rhizosphere	PEDLNGIDLAVRISKHYRAVPLPMWWPAVAVALKALHKIGIAIVKPDQLTRLISEKTGTAASAKTPRDRVRSFPAN*
Ga0070670_1002816083	3300005331	Switchgrass Rhizosphere	IQQHREGVRIETVCGPEDLNGFKLASRIAKRHRALPVPLWWPAVAVGLKTLNAIGFAIVKPDQLTRLTGNKTGTAASGENWSSREQL*
Ga0070670_1006407891	3300005331	Switchgrass Rhizosphere	ETVCGPEDLNGIELARRIGKRYRAVPLPLWWPAVALNLRVLHKIGFDIVKPDQLTRLIGAKTGTAASAGNTPKWVRSFPEP*
Ga0068869_1018547981	3300005334	Miscanthus Rhizosphere	ETICGPEDLNGIELAGRIFKHYRALPLPLWWPAVSISLKTLQKLGWAIVKPDQLTRLTGDKTGNAASRALTSEELRRFPAN*
Ga0070692_103080741	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	LSGMELANRIAKHHRALPLPLWWPAVSLSLKALDKLGLRIVKPDQLPRLIGEKTGTASSANATPKSVRRFL*
Ga0070659_1011571912	3300005366	Corn Rhizosphere	TKLAAELIQQHQDGIRIETVCGPENLNGIELASRIAKRHRAIPLLLWWPAVAVGLKTLHKLGFAIVKPDQLTRLTVKKTGSTANTRKGLRPFLSKS*
Ga0070705_1008300111	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VCGPEDLSGLALALRIGKRYRAIPLPLWWPMVSVGLKGLHKIGFDVVRPDQLRRLLGEKTGTAASAKISRDGAKRFLLR*
Ga0070705_1016340032	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	FTTLAAELIQQHQNGVRIETMCGPEDLSGIDLALRIGKRYHALPLPLWWPAVAVGLKALHKIGIAIVKPDQLTRLTGAKTGNAQNSKTRRFLES*
Ga0070694_1009940371	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	QFGVRIETVCGPEDLSGVDLALRISERYRAVPLPMWWPAVAVSLKALHKIGIAIVKPDQLTRLIGEKTGTAASATTSPRETVRRFLQN*
Ga0070694_1011220351	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	NDGIRIETVCGPEDLNGLALASRISKRYRALPVPLWWQAVTIGLRALHKLGFAIVKPDQLTRLISKKTGTSNSANTPRSLRRFLTD*
Ga0070707_1008453202	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	CGPEDLSGMVLAYRIGKRYRALPLPLWWPAVTVFLKALHKFGFAIVKPDQLTRLVGEKTGTAASAKSTGGARRFLAS*
Ga0070699_1001047882	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	AVELIQQHNTGVRIETICGPEDLNGIELAGRIFKHYRALPLPLWWPAVSISLKTLQKLGWAIVKPDQLTRLTGDKTGNAASRALTSEELRRFPAN*
Ga0070695_1001579981	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	GVTIENVCGPEDLNGVELAQRIAKRYRALPVPLWWPAAAISLKVLHALGFSIIKPDQLSRLVGEKTATAGSAKRNSEGVKHFA*
Ga0070696_1005987761	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	HVDDFSRLTAELIREHDDGIRIETVCGPEDLNGLALASRISKRYRALPVPLWWQAVTIGLRALHKLGFAIVKPDQLTRLISKKTGTSNSPNTPRSLRRFLTD*
Ga0070696_1006353551	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	QFAPMHVDDFTRLAVKLIQQHNTGVRIETICGPEDLNGIELAGRIFKHYRALPLPLWWPAVSISLKTLQKLGWAIVKPDQLTRLTGDKTGNAASRALTSEELRRFPAN*
Ga0070696_1015630571	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	EDLSGMRLACRICKRYWAVPVPLWWPAFAICLQALNKLGFAIVKPDQLPRLVCDKTATAKSAKAREKSRAFLID*
Ga0070664_1018010781	3300005564	Corn Rhizosphere	LAVKLIQQHNTGVRIETICGPEDLNGIELAGRIFKHYRALPLPLWWPAVSISLKTLQKLGWAIVKPDQLTRLTGDKTGNAASGDLTSEELRRFPAN*
Ga0068857_1006273871	3300005577	Corn Rhizosphere	FSHLAAELIQQHRNGVRIETICGPEDLNGMVLAYRIGKSYRALPLPLWWPAVAVGLNALHKFGFAIVKPDQLARLVGEKTGTAASTKTNRNAARRFPAN*
Ga0068857_1018793192	3300005577	Corn Rhizosphere	TVCGPEDLNGIELARRIGKRYRAVPLPLWWPAVALNLRVLHKIGFDIVKPDQLTRLIGAKTGTAASAENAPTWVRSFPEP*
Ga0068859_1000880944	3300005617	Switchgrass Rhizosphere	GVKIVNVCGPEDLSGMELANRIAKHHRALPLPLWWPAVSLSLKALDKLGLRIVKPDQLPRLIGEKTGTASSANATPKSLRRFL*
Ga0068859_1004488151	3300005617	Switchgrass Rhizosphere	RIETICGPEDLNGIELAQRISKHYRALPLPLWWPAVSISLKTLQKLGWAIVKPDQLTRLTGSKTGNAASRDLTSEELRRFPAN*
Ga0068859_1005416852	3300005617	Switchgrass Rhizosphere	IRIETVCGPEDLTGIALASRIGKHYRALPFPLWWPAVAVSLKLLHKLGFAIVKPDQLTRLTGEKTGNATALERD*
Ga0068859_1022923291	3300005617	Switchgrass Rhizosphere	VDDFTTLAAELIQQHDKGLRIETMCGPEDLSGVDLAMRISKYYRAVPLPMWWPAVALGLKVLHRVGIGIVKPDQLTRLTSKKTRAAESSTRSARRFLAN*
Ga0068864_1020342051	3300005618	Switchgrass Rhizosphere	GIELANRIAKHHRALPLPLWWPALAVCLKVVDKLGLRIVKPDQLPRLVGEKTGTAGSANSTPKGMRRFL*
Ga0068863_1004190532	3300005841	Switchgrass Rhizosphere	FAPMHVDDFTRLAAELIQQHHNGVRIETVCGPEDLNGIDLALRISKRYHAVPLPMWWPAATVALKALHALGFAIVKPDQLTRLIGEKTGTTSNTTNVKRFLID*
Ga0068860_1004216233	3300005843	Switchgrass Rhizosphere	CGPEDLSGIELANRIAKRHRALPLPLWWPALAVCLKALDKLGLRIVKPDQLPRLVGEKTGTAGGANSTPKGIRRFL*
Ga0097621_1002266312	3300006237	Miscanthus Rhizosphere	QSGVRIETMCGPEDLSGIDLASRISKRYRAVPLPMWWPAVAVSLKVLHAIGFTIVKPDQLTRLIGEKTGTAETNSRELRRFLTD*
Ga0075421_1001918194	3300006845	Populus Rhizosphere	DLSGMELANRIGKRYRAVALPVWWPAVSVGLKVLHKIGFEIVKPDQLTRLIGEKTGTAKSARNGLRRFPAD*
Ga0075420_1009094321	3300006853	Populus Rhizosphere	LIWKHHDGVRIETVCGPEDLNGLDLAYRISKRYHAVPVPLWWPAVALSLKALRKIGLPVVKPDQLTRLISKKTGTSNNANITPKPVRRFLTD*
Ga0075420_1011415181	3300006853	Populus Rhizosphere	GELIQQQREGVGIENMCGPEDLNGLVLAKRISKRYRAIPLPVWWPVAAVCLRALHKLGLDIVKPDQLTRLVGEKTGTAQSARSVRRFLAN*
Ga0075425_1006067812	3300006854	Populus Rhizosphere	SRHAAELIQQHHNGVKIESVCGPEDLNGLVLAYRICKHYRAVPLPLWWPAVALCLKASHKLGFAIVKPDQLTRLISEKTGNAKSARTTREGVRRFLAN*
Ga0075429_1008746772	3300006880	Populus Rhizosphere	LIQQQRNGIRIETMCGPEDLTGIALARRVARRYRALPLPLWWPAVAVGLKALHKIGFAVVEPDQLTRVIGEKTGTAASGKTAPDTLRRFPEN*
Ga0075424_1009938331	3300006904	Populus Rhizosphere	AGVRIETVCGPEDLNGIELARRIGKRYSAVPLPLWWPAVALSLKVLHKIGFDLVKPDQLTRLIGAKTGTAASAGNTPKWVRSFPEP*
Ga0075419_100642422	3300006969	Populus Rhizosphere	PMHVDDFSRLAAELIQQQRNGIRIETMCGPEDLTGIALARRVARRYRALPLPLWWPAVAVGLKALHKIGFAVVKPDQLTRLIGEKTGTAASGKTAPDTLRRFPEN*
Ga0075419_101569071	3300006969	Populus Rhizosphere	DDFSRLAAELIQQQRNGITIETMCGPEDLTGIALAQRIAKRYRAVPLPLWWPAVAVGLKALHKIGFAVVKPDQLTRLIGEKTGTAASAKTFPARRFLEN*
Ga0105251_101920741	3300009011	Switchgrass Rhizosphere	HQSGVRIETMCGPEDLSGIDVASRISKRYRAVPLPMWWPAVAVSLKVLHAIGFTIVKPDQLTRLIGEKTGTADPMSNSGKAKRFQIERVIDKTPEP*
Ga0075418_121819072	3300009100	Populus Rhizosphere	GVRIETVCGPEDLNGLDLASRISKRYRAVPVPLWWPSVSIGLKALQKIGLRIVKPDQLTRLVSKKTGTAVSAKTTLDAARRFLAD*
Ga0105247_103831461	3300009101	Switchgrass Rhizosphere	ETICGPEDLNGLVLASRIAKHHRALPLPLWWPAVNLGLKVLHKLGFTIVKPDQLTRLVGEKTGTAAGTKSTTDVRRFLAN*
Ga0105247_104743731	3300009101	Switchgrass Rhizosphere	NNGLRIETICGPEDLNGIELAQRISKHYRALPLPLWWPAVSFTLKTLQKLGWAIVKPDQLTRLTGAKTGNAASRDLTSEELRRFPAN*
Ga0105247_109455782	3300009101	Switchgrass Rhizosphere	AVELIQQHNTGVRIETICGPEDLNGIELAQRIFKHYRALPLPLWWPAVSISLKTLQKLGWAIVKPDQLTRLTGSKTGNAASRDLTSEELRRFPAN*
Ga0114129_123849502	3300009147	Populus Rhizosphere	PLHVDDFSTIAAELIRQHDDGVRIENLCGPEDLNGIVLAYRIGKRYHAVPLPLWWPAVSVCLKALHKTGFEIVKPDQLTRLIGEKTGTAASARTTNRELRRFLAE*
Ga0105243_103611531	3300009148	Miscanthus Rhizosphere	QHHDGTRIENMFGPEDLSGMRLACRICKRYWAVPVPLWWPAFAICLQALNKLGFAIVKPDQLPRLVCDKTATAKSAKAREKSRAFLID*
Ga0105243_113798132	3300009148	Miscanthus Rhizosphere	CGPEDLNGLALASRIAKRHRALPLPLWWPAVSVGLKVLHKLGFTVVKPDQLTRLTGSKTATAASATTTQLFSRRLRRLV*
Ga0075423_110321782	3300009162	Populus Rhizosphere	LNGVVLAQRISKAYRAVPLPLWWSAAAVCLKALHRIGFAFVKPDQLTRLTGEKTGTAASAKISLARMRRFF*
Ga0075423_128208471	3300009162	Populus Rhizosphere	IENVCGPEDLNGMDLAYRIGKRYRALPLPMWWPAVALGLKALHKIGFAIVKPDQLTRLVSEKTGTAKTSSTGVKHFPAE*
Ga0105241_109042951	3300009174	Corn Rhizosphere	MHVDDFTRLTAELIQQHNNGLRIETICGPEDLSGMALAARIAKHHRALPLPLWWPAVSISLRVLHKLGFAIVKPDQLTRLTGDKTGNAASRDLTSEELRRFPAN*
Ga0105248_112961141	3300009177	Switchgrass Rhizosphere	ILQHRNGARIETMCGPEDLSGMVLAYRIGKRYRAVPLPLWWPAVAVGLKALHAFGVAIVKPDQLTRLVGEKTGTAASTKTTRDTVKRFPAD*
Ga0105248_126904311	3300009177	Switchgrass Rhizosphere	HVDDFTRLAVKLIQQHNTGVRIETICGPEDLNGIELAGRISKHYRALPLPLWWPAVSISLKTLQKLGWAIVKPDQLTRLTGDKTGNAASRALTSEELRRFPAN*
Ga0105248_132260051	3300009177	Switchgrass Rhizosphere	MHVDDFTRLAAKLIQQHHNGVRIETVCGPEDLNGIDLALRISKRYHAVPLPMWWPAATVALKALHALGFAIVKPDQLTRLIGEKTGTTSNTTNVKRFLID*
Ga0105238_105851852	3300009551	Corn Rhizosphere	QQHNNGIKIETICGPEDLNGLALASRIAKHHRALPLPLWWPIVAVGLKTLHKLGFTIVKPDQLTRLTGEKTGTANSTTSLRRFPAN*
Ga0126307_108602411	3300009789	Serpentine Soil	ETMCGPEDLTGMVLASRIAKRYRALSLPLWWPALAVGLKALQNVGFAIVKPDQLTRLIGEKTATAATAGTRREGVRRFP*
Ga0126305_108536182	3300010036	Serpentine Soil	AAELIQQHNAGVRIETVSGPEDLTGLALASRIAKQYRAVPVPLWWPAVAVCLKALHKIGFEIVKPDQLTRLTSKKTETAASATTTRERVRRFPAN*
Ga0126304_109078901	3300010037	Serpentine Soil	HQDGVRIENVCGPEDLNGMVLAYRICKRYGAVPLPLWWPAVAVGLKALHKLGFPIVKPDQLTRLISEKTGTAESATPAAVRRFLSN*
Ga0126314_113233881	3300010042	Serpentine Soil	QHDNGVRIESVCGPEDLSGMELAYRIGKRNRAVPLPLWWPAVAVCLKALHKIGFAIVKPDQLPRWIGEKTGTAKSAKTTHEEGKRFLAS*
Ga0126310_113756011	3300010044	Serpentine Soil	QQHDEGVRVENVCGPEDLNGIVLAYRIGKRYRAVPLPLWWPAVAVCLRALHKLGFEVVKPDQLTRLISEKTGTAQSAGTPRTARFLES*
Ga0126382_117412981	3300010047	Tropical Forest Soil	SRLAADLIQQHHSGVRIENMCGPEDLNGMELAQRISKRYRALPLPVWWPVVAIGLKTLHKIGVAVVKPDQLTRLTGAKTGTAASANTTTANLHGGFPR*
Ga0134124_101944973	3300010397	Terrestrial Soil	GIELARRIGKRYRAVSLPLWWPAVALSLKVLHKMGFDIVKPDQLTSLIGAKTGTAASAGNTPEWVRSFPEP*
Ga0134124_114013681	3300010397	Terrestrial Soil	VAQLIQQHDQGVRIETVCGPEDLSGIALAARIGKRYRALPLPLWWPMVSMGLKALHKIGVDVVKPDQLTRAVSEKTATAQSSKTDGSGLRRFLTVE*
Ga0134124_132191021	3300010397	Terrestrial Soil	ELIQQHDDGVRIETVCGPEDLNANELAQRIAKRHRAVPLPLWWPALAVSLKALHKIGFSIVKPDQLTRLTAAKTGTAASASEKIRRFPAN*
Ga0134123_100374675	3300010403	Terrestrial Soil	VRIVTVCGPEDLSGTDLALRISKRYRAVPLPMWWPVVSVSLKALHKLGIEIVKPDQLTRLIGEKTGTAQTNSPRKLISFL*
Ga0134123_134893661	3300010403	Terrestrial Soil	VRIETICGPEDLNGIELAGRISKHYRALPLPLWWPAVSISLKTLQKLGWAIVKPDQLTRLTGDKTGNAASRALTSEELRRFPAN*
Ga0164301_102019821	3300012960	Soil	DDGVTIENVCGPEDLNGVELAQRIAKRYRALPVPLWWPAAAISLKVLHVLGFAIVKPDQLSRLVGEKTATAGSAKRNSEGVKHFA*
Ga0164304_117293102	3300012986	Soil	LELAYRIAKRYRALPLILWWPALALFLKALNKLGLGIVKPDQLQRLVSEKTGTATSAKKPRERFRRFLRTDHR*
Ga0164307_116159961	3300012987	Soil	HDGVRIETLCGPEDLNGMVLAYRICKRYRAVPLPLWWPALAVSLKALHKLGFAIVKPDQLTRLVSEKTGTATSAKTAREAVRRFLAN*
Ga0157373_104953542	3300013100	Corn Rhizosphere	HVDDFTRLAVELIQQHNTGVRIETICGPEDLNGIELAGRISKHYRALPLPLWWPAVSISLKTLQKLGWAIVKPDQLTRLTGDKTGNAASRALTSEELRRFPAN*
Ga0157374_125534531	3300013296	Miscanthus Rhizosphere	LKLAYRIAKRYRAVPLILWWPALAVFLKALNKLGLEVVKPDQLQRLVSEKTGTAASATKPREWFRRFPAD*
Ga0157378_113822601	3300013297	Miscanthus Rhizosphere	IQQHTHGVRIETICGPEDLNGLTLASRIAKRHRALPLPLWWPAVAVGLKALHKLGFEIVKPDQLTRLTGSKTGNAVSAKTVREEARRFSAD*
Ga0163162_108444161	3300013306	Switchgrass Rhizosphere	IELAKRIAKHHRALPLPLWWPALAVCLKAVDKLGLRIVKPDQLPRLVGEKTGTAGGANSTPKGIRRFL*
Ga0157372_121228121	3300013307	Corn Rhizosphere	SGIRLAWRISKRYRAVPLPMWWPVVSITLKALHKIGFEIVKPDQLTRLISEKTGTAETASNTPRKLISFL*
Ga0157375_116573712	3300013308	Miscanthus Rhizosphere	YDFCRVAAELIHEHQTGVRIETVCGPEDLSGTDLALRISKRYRAVPLPMWWPVVSVSLKALHKLGIEIVKPDQLTRLIGEKTGTAQTNSPRKLISFL*
Ga0163163_104384552	3300014325	Switchgrass Rhizosphere	RIETICGPEDLSGMALAARIAKHYRALPLPLWWPAVSITLKTLQKLGWAIVKPDQLTRLTGAKTGNAASRDLTSEELRRFPAN*
Ga0163163_125792851	3300014325	Switchgrass Rhizosphere	MHVDDFTTLAAELIQQHDKGLRIETMCGPEDLSGVDLAMRISKYYRAVPLPMWWPAVALGLKVLHRVGIGIVKPDQLTRLTSKKTRAAESSTRSARRFLAN*
Ga0157380_124985721	3300014326	Switchgrass Rhizosphere	CGPEDLSGMVVASRISTQYRAIPLPLWWPAVAVALKALHKIGFGIVKPDQLTRLTSKKTGTAASATSLERGRCFPAG*
Ga0157377_105457101	3300014745	Miscanthus Rhizosphere	ELIQQQDSGIRIETICGPEDISGMVLASRIAKYHRALPLPLWWPAVNVGLKLLQQIGFAVVKPDQLTRLTGRKTGTAASAGSMRDGVRRFPAN*
Ga0132256_1010127871	3300015372	Arabidopsis Rhizosphere	DDFSRLVAELIQQHVDGVRIENVCGPEDLNGVVLAQRISKAYGAVPLPLWWPAAAVCLKALHRIGFAVVKPDQLTRLISEKTGTAASARITHAEMRRFL*
Ga0132256_1029405962	3300015372	Arabidopsis Rhizosphere	IQLALRMGKRYRAVPLPLWWPAVALSLKVLHKMGFDIVKPDQLARLIGAKTGTAASAGNTPKWVRSFPEP*
Ga0132257_1007738892	3300015373	Arabidopsis Rhizosphere	IAAEMIRQHHDGVRIETICGPEDLTGLVVARRIAKHYRAVPLPLWWPAVTIGARALHWLGFDVVKPDQLARSVGEKTGTAASDNLNREQLRGFFVDVDK*
Ga0132255_1038136891	3300015374	Arabidopsis Rhizosphere	ELIQQDNAGVRIVNVCGPEDLSGIALAYRISKRYRAIPLPLWWPALSVGLKALQRLGFSIVKPDQLPRLIGEKTGTAASSKIGRDTLKRFPAN*
Ga0163161_116841101	3300017792	Switchgrass Rhizosphere	ETICGPEDLNGIELAQRISKHYRALPLPLWWPAVSISLKTLQKLGWAIVKPDQLTRLTGDKTGTASNRALTSEGLRRFPAK
Ga0190274_124461531	3300018476	Soil	PMHVDDFTKLTAELIQQHNNGIRIETVCGPEDLNGIALASRLAKRYRALPLPLWWPIVNVGLKALQQIGFAVVKPDQLTRLTGEKTGTAASATVTRAGIKRFPAN
Ga0207713_11741891	3300025735	Switchgrass Rhizosphere	DLIQQHQSGVRIETMCGPEDLSGIDVASRISKRYRAVPLPMWWPAVAVSLKVLHAIGFTIVKPDQLTRLIGEKTGTADPMSNSGKAKRFQIERVIDKTPEP
Ga0207710_100392071	3300025900	Switchgrass Rhizosphere	RIETICGPEDLSGIDLALRISKRYRAVPLPMWWPAVALGLKALHKIGITIVKPDQLTRLIGVKTGAAASATNTPKWVRVFLTTDYTN
Ga0207654_103974502	3300025911	Corn Rhizosphere	QFAPMHVDDFTRLAVELIQQHNTGVRIETICGPEDLNGIELAGRISKHYRALPLPLWWPAVSISLKTLQKLGWAIVKPDQLTRLTGDKTGNAASRALTSEELRRFPAN
Ga0207654_114113551	3300025911	Corn Rhizosphere	GPEDLNGLALASRIAKRQRALPLPLWWPAVSVGLKVLHKLGFTVVKPDQLTRLTGSKTATAASATTTQLFIHRLRRLV
Ga0207662_103152082	3300025918	Switchgrass Rhizosphere	SVLAAELIQQHHEGVKIVNVCGPEDLSGMELANRIAKHHRALPLPLWWPAVPLSLKALDKLGLRIVKPDQLPRLIGEKTGTASSANATPKSVRRFL
Ga0207646_109665132	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	DGVRIENVCGPEDLSGMVLAYRIGKRYRALPLPLWWPAVTVFLKALHKFGFAIVKPDQLTRLVGEKTGTAASAKSTGGARRFLAS
Ga0207694_103610611	3300025924	Corn Rhizosphere	QQHNNGIKIETICGPEDLNGLALASRIAKHHRALPLPLWWPIVAVGLKTLHKLGFTIVKPDQLTRLTGEKTGTANSTTSLRRFPAN
Ga0207687_111960672	3300025927	Miscanthus Rhizosphere	SGLALASRIAKLHRALPLPLWWPAVAVGLKALHKLGFRIVKPDQLTRLTGKKTGTAASAKTTHRSQLLGQS
Ga0207686_100729962	3300025934	Miscanthus Rhizosphere	QFAPMHVDDFTRLAVELIQQHNTGVRIETICGPEDLNGIELAGRISKHYRALPLPLWWPAVSISLRTLQKLGWAIVKPDQLTRLTGDKTGNAASRALTSEELRRFPAN
Ga0207709_113455601	3300025935	Miscanthus Rhizosphere	IETVCGPEDLNGFKLASRIAKRHRALPVPLWWPAVAVSLKTLNAIGFAIVKPDQLTRLVGKKTGTAASGENWSSREQL
Ga0207711_106454552	3300025941	Switchgrass Rhizosphere	NGVRIETICGPEDLSGLALASRIAKLHRALPLPLWWPAVAVGLKALHKLGFRIVKPDQLTRLTGKKTGTAASAKTTHRSQLLGQS
Ga0207689_106167662	3300025942	Miscanthus Rhizosphere	NGLRIETICGPEDLNGIELAQRISKHYRALPLPLWWPAVSISLKTLQKLGWAIVKPDQLTRLTGNKTGNAASRDLTSEELRRFPAN
Ga0207689_115573441	3300025942	Miscanthus Rhizosphere	PLHVDDFSALAAELILQHRNGVRIETMCGPEDLTGMVLAYRIGKRYRAVPLPVWWPVVSVGLKALHKLGIDVVKPDQLTRLTGEKTGSAKTNRDGLRRFPAD
Ga0207679_108518111	3300025945	Corn Rhizosphere	QQHDSGIRIETICGPEDLSGIVLASRIAKRHNAIPLPLWWPAVAVGLKLLHKLGFTLIKPDQLARLTGEKTGNAARGDLTSQESKRFPAN
Ga0207651_102053912	3300025960	Switchgrass Rhizosphere	TKLAAELIQQHQDGIRVETVCGPEDLSGLTLASRIAKRHRAIPLLLWWPAVAVGLKALRKLGFAIVKPDQLTRLTVKKTGSTANTRKGLRPFLSQS
Ga0207676_103641751	3300026095	Switchgrass Rhizosphere	DFTKLTAELIQQHDEGVRIETMCGPEVLNGKELAQRIAKYHHAFRLPLWWPALSVTLKVLHKIGLSIVKPDQLTRLTAAKTGSAAGTKTTTQVRRFPAN
Ga0207674_122711511	3300026116	Corn Rhizosphere	IVNVCGPEDLSGMELANRIAKHHRALPLPLWWPAVSLSLKALDKLGLRIVKPDQLPRLIGEKTGTASSANATPKSVRRFL
Ga0209382_104743971	3300027909	Populus Rhizosphere	DLSGMELANRIGKRYRAVALPVWWPAVSVGLKVLHKIGFEIVKPDQLTRLIGEKTGTAKSARNGLRRFPAD
Ga0268264_125119502	3300028381	Switchgrass Rhizosphere	MHVDDFTTLAAELIQQHDKGLRIETMCGPEDLSGVDLAMRISKYYRAVPLPMWWPAVALGLKVLHRVGIGIVKPDQLTRLTSKKTRAAESSTRSARRFLAN
Ga0268240_102019561	3300030496	Soil	PMHVDDFSKLAAQLIQQHDNGVRIETVCGPEDLSGMELASRIGKRYRAVALPVWWPAVSVGLKALHKIGIDVVKPDQLTRLIGEKTGTAKNARNGLKRFPAD
Ga0307415_1010588781	3300032126	Rhizosphere	VSIHTEGVRIETVCGPEDLNGLALASRISKRYRALPVPLWWPAVALGLKALHKIGFTVVKPDQLTRLVAEKTGTANTTSNSVRRFPTD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081483

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences