Metagenome / Metatranscriptome Family F080858

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080858
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	102 residues
Representative Sequence	MPRFEELRQVLGQILQERPNCYWLYDQILNRLREVRPDILEGLEERDGKGYGRGGGEYYGPDSAIAHCLQDWPECVDVQYLSGRDLQIADIKADNDAMAIYRWIG
Number of Associated Samples	63
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.96 %
% of genes near scaffold ends (potentially truncated)	25.44 %
% of genes from short scaffolds (< 2000 bps)	57.89 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.895 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment (32.456 % of family members)
Environment Ontology (ENVO)	Unclassified (68.421 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Sediment (saline) (40.351 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.84% β-sheet: 15.79% Coil/Unstructured: 47.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.4.5.0: automated matches	d3cuqa1	3cuq	0.72179
a.4.5.11: Helicase DNA-binding domain	d1w5sa1	1w5s	0.68617
a.4.5.0: automated matches	d4lmya_	4lmy	0.68067
a.4.5.0: automated matches	d3mwma_	3mwm	0.66673
a.4.5.0: automated matches	d5nbca_	5nbc	0.66493

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00313	CSD	6.14
PF01145	Band_7	3.51
PF00076	RRM_1	3.51
PF00072	Response_reg	2.63
PF00464	SHMT	2.63
PF04055	Radical_SAM	1.75
PF00271	Helicase_C	1.75
PF05552	TM_helix	1.75
PF07638	Sigma70_ECF	0.88
PF01783	Ribosomal_L32p	0.88
PF00753	Lactamase_B	0.88
PF02810	SEC-C	0.88
PF13366	PDDEXK_3	0.88
PF00009	GTP_EFTU	0.88
PF07927	HicA_toxin	0.88
PF00884	Sulfatase	0.88
PF04545	Sigma70_r4	0.88
PF01527	HTH_Tnp_1	0.88
PF00216	Bac_DNA_binding	0.88
PF09285	Elong-fact-P_C	0.88
PF03358	FMN_red	0.88
PF13282	DUF4070	0.88
PF13683	rve_3	0.88
PF01012	ETF	0.88
PF01632	Ribosomal_L35p	0.88
PF00482	T2SSF	0.88
PF01408	GFO_IDH_MocA	0.88
PF02195	ParBc	0.88
PF00982	Glyco_transf_20	0.88
PF01609	DDE_Tnp_1	0.88
PF00270	DEAD	0.88
PF03060	NMO	0.88
PF01627	Hpt	0.88
PF00383	dCMP_cyt_deam_1	0.88
PF02050	FliJ	0.88
PF00472	RF-1	0.88
PF13191	AAA_16	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	2.63
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	2.63
COG2882	Flagellar biosynthesis chaperone FliJ	Cell motility [N]	2.63
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	1.75
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	1.75
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.88
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.88
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.88
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.88
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.88
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.88
COG2086	Electron transfer flavoprotein, alpha and beta subunits	Energy production and conversion [C]	0.88
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.88
COG2025	Electron transfer flavoprotein, alpha subunit FixB	Energy production and conversion [C]	0.88
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.88
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.88
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	0.88
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.88
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.88
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.88
COG0333	Ribosomal protein L32	Translation, ribosomal structure and biogenesis [J]	0.88
COG0291	Ribosomal protein L35	Translation, ribosomal structure and biogenesis [J]	0.88
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.77 %
Unclassified	root	N/A	41.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.77 %
Unclassified	root	N/A	41.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.89 %
Unclassified	root	N/A	41.23 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.23 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	26.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.88 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.23 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	25.44 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.88 %
Candidatus Latescibacteria	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.23 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	9.65 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	2.63 %
unclassified Candidatus Latescibacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria	0.88 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.23 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.63 %
Planctomycetes bacterium RBG_16_55_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_55_9	1.75 %
Planctomycetes bacterium RBG_13_50_24	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_50_24	1.75 %
Planctomycetes bacterium GWF2_50_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_50_10	1.75 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	1.75 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.88 %
Planctomycetes bacterium B3_Pla	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium B3_Pla	0.88 %
Planctomycetes bacterium GWF2_42_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_42_9	0.88 %
Ascomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.23 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.63 %
unclassified Phycisphaerales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales	1.75 %
Planctomycetes bacterium RBG_16_55_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_55_9	1.75 %
Planctomycetes bacterium RBG_13_50_24	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_50_24	1.75 %
Planctomycetes bacterium GWF2_50_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_50_10	1.75 %
saccharomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta	0.88 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.88 %
Planctomycetes bacterium B3_Pla	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium B3_Pla	0.88 %
Planctomycetes bacterium GWF2_42_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_42_9	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.23 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.63 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1.75 %
Planctomycetes bacterium RBG_16_55_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_55_9	1.75 %
Planctomycetes bacterium RBG_13_50_24	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_50_24	1.75 %
Planctomycetes bacterium GWF2_50_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_50_10	1.75 %
Pezizomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	0.88 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.88 %
Planctomycetes bacterium B3_Pla	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium B3_Pla	0.88 %
Planctomycetes bacterium GWF2_42_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_42_9	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.23 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.63 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1.75 %
Planctomycetes bacterium RBG_16_55_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_55_9	1.75 %
Planctomycetes bacterium RBG_13_50_24	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_50_24	1.75 %
Planctomycetes bacterium GWF2_50_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_50_10	1.75 %
leotiomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta	0.88 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.88 %
Planctomycetes bacterium B3_Pla	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium B3_Pla	0.88 %
Planctomycetes bacterium GWF2_42_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_42_9	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.23 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.63 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1.75 %
Planctomycetes bacterium RBG_16_55_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_55_9	1.75 %
Planctomycetes bacterium RBG_13_50_24	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_50_24	1.75 %
Planctomycetes bacterium GWF2_50_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_50_10	1.75 %
sordariomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta	0.88 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.88 %
Planctomycetes bacterium B3_Pla	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium B3_Pla	0.88 %
Planctomycetes bacterium GWF2_42_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_42_9	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.23 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.63 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1.75 %
Planctomycetes bacterium RBG_16_55_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_55_9	1.75 %
Planctomycetes bacterium RBG_13_50_24	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_50_24	1.75 %
Planctomycetes bacterium GWF2_50_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_50_10	1.75 %
Leotiomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes	0.88 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.88 %
Planctomycetes bacterium B3_Pla	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium B3_Pla	0.88 %
Planctomycetes bacterium GWF2_42_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_42_9	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.23 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.63 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1.75 %
Planctomycetes bacterium RBG_16_55_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_55_9	1.75 %
Planctomycetes bacterium RBG_13_50_24	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_50_24	1.75 %
Planctomycetes bacterium GWF2_50_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_50_10	1.75 %
Helotiales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales	0.88 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.88 %
Planctomycetes bacterium B3_Pla	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium B3_Pla	0.88 %
Planctomycetes bacterium GWF2_42_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_42_9	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.23 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.63 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1.75 %
Planctomycetes bacterium RBG_16_55_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_55_9	1.75 %
Planctomycetes bacterium RBG_13_50_24	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_50_24	1.75 %
Planctomycetes bacterium GWF2_50_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_50_10	1.75 %
Ploettnerulaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales → Ploettnerulaceae	0.88 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.88 %
Planctomycetes bacterium B3_Pla	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium B3_Pla	0.88 %
Planctomycetes bacterium GWF2_42_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_42_9	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.23 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.63 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1.75 %
Planctomycetes bacterium RBG_16_55_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_55_9	1.75 %
Planctomycetes bacterium RBG_13_50_24	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_50_24	1.75 %
Planctomycetes bacterium GWF2_50_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_50_10	1.75 %
Rhynchosporium	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales → Ploettnerulaceae → Rhynchosporium	0.88 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.88 %
Planctomycetes bacterium B3_Pla	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium B3_Pla	0.88 %
Planctomycetes bacterium GWF2_42_9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_42_9	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001751\|JGI2172J19969_10003726	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	6757	Open in IMG/M
3300001752\|JGI2173J19968_10016187	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_50_24	2675	Open in IMG/M
3300001753\|JGI2171J19970_10033158	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_42_9	2142	Open in IMG/M
3300001753\|JGI2171J19970_10047452	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_55_9	1700	Open in IMG/M
3300001854\|JGI24422J19971_10133328	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_50_10	1194	Open in IMG/M
3300001854\|JGI24422J19971_10306907	Not Available	630	Open in IMG/M
3300002053\|SMTZ23_10017259	All Organisms → cellular organisms → Bacteria	11465	Open in IMG/M
3300002053\|SMTZ23_10026712	All Organisms → cellular organisms → Bacteria	10372	Open in IMG/M
3300005613\|Ga0074649_1000275	All Organisms → cellular organisms → Bacteria	67707	Open in IMG/M
3300005782\|Ga0079367_1054119	Not Available	1705	Open in IMG/M
3300005782\|Ga0079367_1104530	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1147	Open in IMG/M
3300005823\|Ga0078745_1008838	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3718	Open in IMG/M
3300005832\|Ga0074469_11195656	Not Available	1071	Open in IMG/M
3300005832\|Ga0074469_11208139	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1187	Open in IMG/M
3300008516\|Ga0111033_1004542	All Organisms → cellular organisms → Bacteria	5293	Open in IMG/M
3300008516\|Ga0111033_1045730	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1810	Open in IMG/M
3300008516\|Ga0111033_1206189	All Organisms → cellular organisms → Bacteria → PVC group	1293	Open in IMG/M
3300008517\|Ga0111034_1043508	All Organisms → cellular organisms → Bacteria	2275	Open in IMG/M
3300009034\|Ga0115863_1021847	All Organisms → cellular organisms → Bacteria	8725	Open in IMG/M
3300009034\|Ga0115863_1049451	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	5419	Open in IMG/M
3300009034\|Ga0115863_1121131	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3233	Open in IMG/M
3300009034\|Ga0115863_1191313	Not Available	2471	Open in IMG/M
3300009034\|Ga0115863_1728628	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1109	Open in IMG/M
3300009034\|Ga0115863_1834945	Not Available	1022	Open in IMG/M
3300009034\|Ga0115863_1849357	Not Available	1012	Open in IMG/M
3300009488\|Ga0114925_10429670	Not Available	916	Open in IMG/M
3300009528\|Ga0114920_10103484	Not Available	1820	Open in IMG/M
3300009529\|Ga0114919_10908718	Not Available	594	Open in IMG/M
3300010302\|Ga0116202_10060948	All Organisms → cellular organisms → Bacteria → Proteobacteria	1917	Open in IMG/M
3300010997\|Ga0139324_1031517	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1093	Open in IMG/M
3300011118\|Ga0114922_10072389	All Organisms → cellular organisms → Bacteria	2974	Open in IMG/M
3300011118\|Ga0114922_10353219	Not Available	1223	Open in IMG/M
3300012931\|Ga0153915_13564825	Not Available	503	Open in IMG/M
3300012964\|Ga0153916_10140581	All Organisms → cellular organisms → Bacteria	2344	Open in IMG/M
3300012964\|Ga0153916_11623903	Not Available	721	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10073884	All Organisms → cellular organisms → Bacteria	2209	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10086820	All Organisms → cellular organisms → Bacteria	2213	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10448819	Not Available	831	Open in IMG/M
(restricted) 3300013133\|Ga0172362_10005615	All Organisms → cellular organisms → Bacteria	10855	Open in IMG/M
(restricted) 3300013133\|Ga0172362_10126968	Not Available	1899	Open in IMG/M
3300018018\|Ga0187886_1000914	All Organisms → cellular organisms → Bacteria	30136	Open in IMG/M
3300021351\|Ga0210365_10832853	Not Available	887	Open in IMG/M
3300022204\|Ga0224496_10123121	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1118	Open in IMG/M
3300022208\|Ga0224495_10014888	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3916	Open in IMG/M
3300022221\|Ga0224506_10054380	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium B3_Pla	2001	Open in IMG/M
3300022221\|Ga0224506_10070681	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1717	Open in IMG/M
3300022221\|Ga0224506_10486344	Not Available	537	Open in IMG/M
3300022556\|Ga0212121_10049871	All Organisms → cellular organisms → Bacteria	3478	Open in IMG/M
3300027814\|Ga0209742_10028039	All Organisms → cellular organisms → Bacteria	1866	Open in IMG/M
3300027888\|Ga0209635_10099957	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2377	Open in IMG/M
3300027888\|Ga0209635_10101723	All Organisms → cellular organisms → Bacteria	2355	Open in IMG/M
3300027888\|Ga0209635_10145946	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_13_50_24	1937	Open in IMG/M
3300027888\|Ga0209635_10349302	Not Available	1163	Open in IMG/M
3300027888\|Ga0209635_10712423	Not Available	732	Open in IMG/M
3300027888\|Ga0209635_10851801	Not Available	647	Open in IMG/M
3300027893\|Ga0209636_10015893	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	7661	Open in IMG/M
3300027893\|Ga0209636_10144428	Not Available	2242	Open in IMG/M
3300027893\|Ga0209636_10190953	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1889	Open in IMG/M
3300027893\|Ga0209636_10192963	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300027893\|Ga0209636_10206290	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1801	Open in IMG/M
3300027893\|Ga0209636_10291911	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium GWF2_50_10	1441	Open in IMG/M
3300027893\|Ga0209636_10391474	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1186	Open in IMG/M
3300027893\|Ga0209636_10465831	Not Available	1055	Open in IMG/M
3300027893\|Ga0209636_10492245	Not Available	1016	Open in IMG/M
3300027893\|Ga0209636_10579989	Not Available	907	Open in IMG/M
3300027893\|Ga0209636_10807946	Not Available	717	Open in IMG/M
3300027893\|Ga0209636_10900734	Not Available	663	Open in IMG/M
3300027901\|Ga0209427_10024353	Not Available	6234	Open in IMG/M
3300027901\|Ga0209427_10031198	All Organisms → cellular organisms → Bacteria	5359	Open in IMG/M
3300027901\|Ga0209427_10037520	All Organisms → cellular organisms → Bacteria	4781	Open in IMG/M
3300027901\|Ga0209427_10055366	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3754	Open in IMG/M
3300027901\|Ga0209427_10205604	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_55_9	1643	Open in IMG/M
3300027901\|Ga0209427_10206699	Not Available	1637	Open in IMG/M
3300027901\|Ga0209427_10265614	Not Available	1391	Open in IMG/M
3300027901\|Ga0209427_10334947	Not Available	1194	Open in IMG/M
3300027901\|Ga0209427_10341869	Not Available	1178	Open in IMG/M
3300027917\|Ga0209536_100290270	Not Available	2047	Open in IMG/M
3300027917\|Ga0209536_100474075	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300027917\|Ga0209536_103226906	Not Available	519	Open in IMG/M
3300030613\|Ga0299915_10024137	All Organisms → cellular organisms → Bacteria	4552	Open in IMG/M
3300030616\|Ga0272442_10072444	All Organisms → cellular organisms → Bacteria	3233	Open in IMG/M
3300030717\|Ga0307927_1036606	Not Available	656	Open in IMG/M
3300031255\|Ga0315554_1019714	Not Available	3058	Open in IMG/M
3300031278\|Ga0307431_1015162	All Organisms → cellular organisms → Bacteria	2849	Open in IMG/M
3300031281\|Ga0307420_1039774	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1750	Open in IMG/M
3300031357\|Ga0307435_1114698	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300031359\|Ga0307426_1257759	Not Available	569	Open in IMG/M
3300031364\|Ga0307445_10032245	All Organisms → cellular organisms → Bacteria	2237	Open in IMG/M
3300031365\|Ga0307443_1157183	Not Available	576	Open in IMG/M
3300031365\|Ga0307443_1167675	Not Available	550	Open in IMG/M
3300031379\|Ga0307434_1142019	Not Available	661	Open in IMG/M
3300031537\|Ga0307419_10318390	Not Available	551	Open in IMG/M
3300031539\|Ga0307380_10063931	All Organisms → cellular organisms → Bacteria	3960	Open in IMG/M
3300031539\|Ga0307380_10082945	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3366	Open in IMG/M
3300031539\|Ga0307380_11351345	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales → Ploettnerulaceae → Rhynchosporium	541	Open in IMG/M
3300031551\|Ga0315548_1002145	All Organisms → cellular organisms → Bacteria	15586	Open in IMG/M
3300031551\|Ga0315548_1014360	All Organisms → cellular organisms → Bacteria	4716	Open in IMG/M
3300031554\|Ga0315544_1011516	All Organisms → cellular organisms → Bacteria	4593	Open in IMG/M
3300031586\|Ga0315541_1118516	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300031624\|Ga0315545_1092226	Not Available	1399	Open in IMG/M
3300031643\|Ga0315533_1131447	Not Available	652	Open in IMG/M
3300031651\|Ga0315543_1103073	Not Available	933	Open in IMG/M
3300031652\|Ga0315553_10124891	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	1252	Open in IMG/M
3300031652\|Ga0315553_10304310	Not Available	662	Open in IMG/M
3300031654\|Ga0315549_1179756	Not Available	853	Open in IMG/M
3300031952\|Ga0315294_10094246	Not Available	3109	Open in IMG/M
3300032020\|Ga0315296_10002990	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	14283	Open in IMG/M
3300032020\|Ga0315296_10015993	All Organisms → cellular organisms → Bacteria	5510	Open in IMG/M
3300032046\|Ga0315289_10034306	All Organisms → cellular organisms → Bacteria	6555	Open in IMG/M
3300032062\|Ga0315551_10247546	Not Available	697	Open in IMG/M
3300032070\|Ga0315279_10002422	All Organisms → cellular organisms → Bacteria	28065	Open in IMG/M
3300032118\|Ga0315277_11722538	Not Available	524	Open in IMG/M
3300033489\|Ga0299912_10023555	All Organisms → cellular organisms → Bacteria	5312	Open in IMG/M
3300033991\|Ga0334965_0000082	All Organisms → cellular organisms → Bacteria	81075	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	94.74%
Terrestrial	Environmental → Terrestrial	5.26%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	75.44%
Freshwater	Environmental → Aquatic → Freshwater	16.67%
Soil	Environmental → Terrestrial → Soil	5.26%
Sediment	Environmental → Aquatic → Sediment	1.75%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.88%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	36.84%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	27.19%
Lake	Environmental → Aquatic → Freshwater → Lake	12.28%
Coastal	Environmental → Aquatic → Marine → Coastal	6.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.39%
Sediment	Environmental → Aquatic → Marine → Sediment	4.39%
Clay	Environmental → Terrestrial → Soil → Clay	3.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.75%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.88%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.88%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	36.84%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	18.42%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	10.53%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	7.89%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	6.14%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	4.39%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.51%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.63%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.88%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.88%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.88%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.88%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.88%

Habitat	Taxonomy	Distribution
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	32.46%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	10.53%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	10.53%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	7.89%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	6.14%
Sediment, Intertidal	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Sediment, Intertidal	6.14%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	4.39%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	4.39%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.51%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.63%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	1.75%
Marine Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Sediment	1.75%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.88%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.88%
Marine Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment	0.88%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001751	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32	Environmental	Open in IMG/M
3300001752	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30	Environmental	Open in IMG/M
3300001753	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-3-24_28	Environmental	Open in IMG/M
3300001854	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54	Environmental	Open in IMG/M
3300002053	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR_SMTZ	Environmental	Open in IMG/M
3300005613	Saline sediment microbial communities from Etoliko Lagoon, Greece - sediment	Environmental	Open in IMG/M
3300005782	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf, PM3	Environmental	Open in IMG/M
3300005823	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 75 cmbsf, MM2	Environmental	Open in IMG/M
3300005832	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBB	Environmental	Open in IMG/M
3300008516	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf. Combined Assembly of MM3PM3	Environmental	Open in IMG/M
3300008517	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 175 cmbsf. Combined Assembly of Gp0128389 and Gp0131431 MM4PM4	Environmental	Open in IMG/M
3300009034	Intertidal mud flat sediment archaeal communities from Garolim Bay, Chungcheongnam-do, Korea	Environmental	Open in IMG/M
3300009488	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG	Environmental	Open in IMG/M
3300009528	Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaG	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300010302	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 325m metaG	Environmental	Open in IMG/M
3300010997	ECM15MPS05_Aassembled -- Sediment microbial communities from coastal marsh in Port Sulphur, LA sequencing method A (2X250bp)	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013127 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cm	Environmental	Open in IMG/M
3300013130 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2	Environmental	Open in IMG/M
3300013133 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s1_kivu2a2	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300021351	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.637 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022204	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_8_1	Environmental	Open in IMG/M
3300022208	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_4_1	Environmental	Open in IMG/M
3300022221	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_8_1	Environmental	Open in IMG/M
3300022556	Kivu_combined assembly	Environmental	Open in IMG/M
3300027814	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-3-8_10 (SPAdes)	Environmental	Open in IMG/M
3300027888	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32 (SPAdes)	Environmental	Open in IMG/M
3300027893	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54 (SPAdes)	Environmental	Open in IMG/M
3300027901	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300030616	Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-Form-2O	Environmental	Open in IMG/M
3300030717	Metatranscriptome of soil microbial communities from Risofladan, Vaasa, Finland - UN-3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031255	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-70	Environmental	Open in IMG/M
3300031278	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-170	Environmental	Open in IMG/M
3300031281	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-40	Environmental	Open in IMG/M
3300031357	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-70	Environmental	Open in IMG/M
3300031359	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-40	Environmental	Open in IMG/M
3300031364	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-30	Environmental	Open in IMG/M
3300031365	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1601-220	Environmental	Open in IMG/M
3300031379	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-220	Environmental	Open in IMG/M
3300031537	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-30	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031551	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-110	Environmental	Open in IMG/M
3300031554	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-130	Environmental	Open in IMG/M
3300031586	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-190	Environmental	Open in IMG/M
3300031624	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-10	Environmental	Open in IMG/M
3300031643	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-30	Environmental	Open in IMG/M
3300031651	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-210	Environmental	Open in IMG/M
3300031652	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-40	Environmental	Open in IMG/M
3300031654	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-200	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300032020	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032062	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-90	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033991	Sediment microbial communities from Lake Vrana, Zadar, Croatia - 4 bact	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI2172J19969_100037262	3300001751	Marine Sediment	MPRFEELRQILGQILQESPNCYWLYDQILNRLRELRPDILEGLEERGGKSYGQGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQIADIKADNDTMAIYRWIG*
JGI2173J19968_100161876	3300001752	Marine Sediment	MPRFEELREILGEILQERPNCYWLCYQILNRLRERNPEILERLEQKYGTGYGRGGGDYYRPDSAIANCLQDWPECVDVQYLFGQDLRVGNIRAIDDTMGIYRWIGETER*
JGI2171J19970_100331583	3300001753	Marine Sediment	MARFEEFREALGQILQERPNCYWLGYQIVEMLRERNPEILEGLEKKFATSYGRGGGDYYXTDSAIAHCLQDWPERVDVQYLLGRDLQIGNVKASDEAITIYRWIG*
JGI2171J19970_100474521	3300001753	Marine Sediment	MPRFEELRQILGQILQESPNCYWLYDQILNRLRELRPDILEGLEERGGKSYGQGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQ
JGI24422J19971_101333284	3300001854	Marine Sediment	MPRFEELRKILGQILQESPNCYWLYDQILNRLRELRPDILEGLEERSDKGYGRGGGEYYGPNSAIAHCLRDWPECVDVQYLSGRDLQI
JGI24422J19971_103069072	3300001854	Marine Sediment	MPRFEELRQILGQILQESPNCYWLYDQILNRLRELRPDILEGLEERGGKSYGQGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQIADIKA
SMTZ23_1001725913	3300002053	Marine Sediment	MARFEEFREALGQILQERPNCYWLGYQIVEMLRERNPEILEGLEKKFATSYGRGGGDYYSTDSAIAHCLQDWPERVDVQYLLGRDLQIGNVKASDEAITIYRWIG*
SMTZ23_100267126	3300002053	Marine Sediment	MPRFEELREALGQILQERPNCFWLPYQIVNRLRERNPEILEVLEEKYSTSYGRGGGDYYSTDSAIAHCLQDWPESVDIQYLLGRDLQIGNVKAGDEAVTIYRWIG*
Ga0074649_100027546	3300005613	Saline Water And Sediment	MPRFEELRQILGQILQESPNCYWLYDQILNRLREVRPDILEGLEERGGKSYGHGGGEYYGPDHAIAHCLRDWPECVDVQYVLGRDLQIVDIKAENEAMAIYRWIG*
Ga0079367_10541193	3300005782	Marine Sediment	CYWLYDQILNRLREVRPDILEGLEERSSKSYGQGGGEYYGPDSAIAYCLRDWPECVEVQYLSGRDLQIADIKADKAAMAIYRWIG*
Ga0079367_11045302	3300005782	Marine Sediment	CYWLYDQILNRLREVRPDILEGFEERSGKSYGQGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRNLQIVDIKADNAAMAIYRWIG*
Ga0078745_10088383	3300005823	Marine Sediment	MPRFEEMREILGQILQESPHCYWLYDQILNRLREVRPDILEGLEERSSKSYGQGGGEYYGPDSAIAYCLRDWPECVEVQYLSGRDLQIADIKADKAAMAIYRWIG*
Ga0074469_111956564	3300005832	Sediment (Intertidal)	MPRFEEMREILGQILQESANCYWLYDQILNRLREVRPDILEGLEKRDGKSYGQGGGEYYGPDSTIAHCLRDWPECVDVQYLSGRDLQIADIKADNDAMAIYRWIGQT*
Ga0074469_112081393	3300005832	Sediment (Intertidal)	MPRFEELRQILGQILQESPNCYWLYDQILNRLREVRPDILEGLEERGDKGYGRGGGEYYGPDSTIAHCLRDWPECVDVQYLSGRDLQIADIKADNDAMAIYRWIGST*
Ga0111033_10045427	3300008516	Marine Sediment	MPRFEEFREAIGQILQEKPNCYWLPYQIVKLLRERNPEILEVLEKKFGTSYGRGGGDYYSTDSAIAHCLQDWPECVEVQYLLGQDLQIGDVKASDEAMTIYRWIG*
Ga0111033_10457301	3300008516	Marine Sediment	MPRFEELRQILGQILQESPNCYWLYDQILNRLREVRPDILEGFEERSGKSYGQGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRNLQIVDIKADNAAMAIYRWIG*
Ga0111033_12061892	3300008516	Marine Sediment	MPRFEEFREALGQILQEIPNCYCLPYQIVKRLREQNPEILEVLEEKYSTSYGRGGGEYYSTDSAIAHCLQDWPECVEVQYLLGRDLQIGDVKASDEAITIYRWIG*
Ga0111034_10435081	3300008517	Marine Sediment	MPRFEEFREAIGQILQEMPNCYWLPYQIVKLLREQNPEILEALEKKFSTSYGRGGGDYYSTDSAIAHCLQDWPECVEIQYLLGQDLQIGDVKAGDEAITIYRWIGQTKN*
Ga0115863_10218479	3300009034	Sediment, Intertidal	MARFEEFREALGQILQESPNCYWLSYQIVNRLRERNPEILEVLEEKYSTSYGRGGGDYYRPGSAIAHCLQDWPECVDVQYLFGRDLQIGDIRVPDETVAVYRWIG*
Ga0115863_10494517	3300009034	Sediment, Intertidal	MVSLDMLLEIKMPRFEELRQILGQILQESPNCYWLYDQILNRLREVCPDILEGLEERGGKAYGQGGGEYYGPDSAIAHCLRDWPERVDVQYLSGRDLQIADTKADNDAMAIYRWIG*
Ga0115863_11211314	3300009034	Sediment, Intertidal	MPRFEELRQILGQILQESPNCYWLYDQILNRLRELRPDILEGLEERGGKGYGRGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLHIADIKADNEAMAIYRWIG*
Ga0115863_11913134	3300009034	Sediment, Intertidal	MPRFEEFREALGQILQEMPNCYWLPYQIVKRLREQNPEILEVLEKKYSTSYGRGGGDYYSTDSAIAHCLQDWPEFVEVQYLLGRDLQIGDVKAGDEAITIYRWIG*
Ga0115863_17286281	3300009034	Sediment, Intertidal	MPRFEELRQVLGQILQESPNCYWLYDQILNRLREVRPDILEGLEERGGKGYGQGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQIADIKADNDAMAIYRWIG*
Ga0115863_18349451	3300009034	Sediment, Intertidal	MPRFEEFREALGQILQQRPNCYWLPYQIVELLRERNPEILEVLQKKFAASYGRGGGDYYSTDSAIAHCLQDWPECVDVQYLLGRDLRIGDVKANDEAITIYRWIG*
Ga0115863_18493571	3300009034	Sediment, Intertidal	NCYWLYDQILNRLREVRPDILEGLEERGGKGYGQGGGEYYGPDSAIAHCLRDWPECVDAQYLSGRDLQIADIKADNNAMAIYRWIG*
Ga0114925_104296702	3300009488	Deep Subsurface	VPKFEELRDVLGEILRERPDCYWLCYQILRRLEEVHPDVLERLRERYCTGHGQGGGAHYRPDSAIANCLSDWRECVDVQYLLGRNLQVGNARATDDLMGIYRWTGQT*
Ga0114920_101034842	3300009528	Deep Subsurface	MPRFEYLREPLGQILQIDTNCYWLCYQILNRLREMHPNILESLEAQYPGQGYGQGGGAHYRPDNAIAQCLTDWEDCVDVQYLRGDDLQIGDIRATNDGMGIYRWIG*
Ga0114919_109087181	3300009529	Deep Subsurface	MPRFEELREVLGQILQERPNCYWLCYQILNRLREQHPEILDGLEERYGTGYGRGGGAPYRPDSAIAQCLSDWPECVDVQYLFGRDLQIGDIRATDDRMGVYQWIS*
Ga0116202_100609482	3300010302	Anoxic Lake Water	MPRFEELRDVLGQILQERPNCYWLCSQILNRLRQLRPEIIEGLEKTDATGYSRGGGTYYRPDNAIAHCLCDWPECVDVQYLFGRDVQVGGVKAPDEAITVYRWIG*
Ga0139324_10315171	3300010997	Sediment	LREVLGQILQEKPNCYWLYDQILNRLREVRPDILEGLAERSDKGYGRGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQIADIKADNEAMAIYRWIG*
Ga0114922_100723894	3300011118	Deep Subsurface	MPRFDEFREALGQILQERPNCYWLPYQIVKRLRERNPEILEVLEKKYSTSYGRGGGDYYSTDSAIAHCLQDWPECVEVQYLLGRDLQICDVKAGDEAITIYRWIG*
Ga0114922_103532192	3300011118	Deep Subsurface	MPRFEELRDVLGQILQESPNCYWLCYQILNRLREVCPEILEGLEKRGGRGYGEGGGDYYRPDSAIAHCLCDWPECVDVRYLLGRDLQVGETRATDEAMTIYRWIGHTES*
Ga0153915_135648251	3300012931	Freshwater Wetlands	VPRFEELRDALGQILQERPNCYWLSYQIVNQLGERNPEILEGLEKKYGTGYIRGGGDYYRPDIAIAHCLQDWPECVDVQYIFGRDLQIGDLKATDDLMGIYRWIG*
Ga0153916_101405813	3300012964	Freshwater Wetlands	MPRFEELRDVLGQILQERPNCYWLCSQILNRLRELRPEIIEGLEKTDATGYSRGGGTYYRPDNAIAHCLCDWPECVDVQYLFGQDVQVGGVKAADEAIAVYRWIG*
Ga0153916_116239031	3300012964	Freshwater Wetlands	MPRFEEFREAIGQILQERPNCYWLPYQIVNRLRERNPEILEGLEKKFGTSYGRGGGDYYRPDIAIAHCLQDWPECVDVQYIFGRDLQIGDLKATDDLMGIYRWIG*
(restricted) Ga0172365_100738844	3300013127	Sediment	RKMPRFEELREVLGQILQERPNCYWLCSQILNRLRELRPEIIEGLEKTDATGYSRGGGTYYRPDNAIAHCLCDWPECVDVQYLFGRDVQVGGVKAPDEAITVYRWIG*
(restricted) Ga0172363_100868203	3300013130	Sediment	MPRFEELREVLGQILQERPNCYWLCSQILNRLRELRPEIIEGLEKTDATGYSRGGGTYYRPDNAIAHCLCDWPECVDVQYLFGRDVQVGGVKAPDEAITVYRWIG*
(restricted) Ga0172363_104488192	3300013130	Sediment	MPRFEELRDVLGQILQERPNCYWLCSQILNRLRQLRPEIIEGLEKTDATGYSRGGGTYYRPDNAIAHCLCDWPECVDVQYLFGQDVQVGGVKAADEAIAVYRWIG*
(restricted) Ga0172362_100056153	3300013133	Sediment	MPRFEELRDVLGQILQERPNCYWLCSQILNRLRELRPEIIEGLEKTDATGYSRGGGTYYRPDNAIAHCLCDWPECVDVQYLFGRDVQVGGVKAPDEAITVYRWIG*
(restricted) Ga0172362_101269684	3300013133	Sediment	MPRFEELRDVLGQILQERPNCYWLCSQILNRLRQLRPEIIEGLEKTDATGYSRGGGTYYRPDNAIAHCLCDWPERVDVQYLFGQDVQVGGIKATDEAIAVYRWIR*
Ga0187886_10009144	3300018018	Peatland	MPRFEELRQVLGQILQERPNCYWLYDQILNRLREVRPDILEGLEERDGKGYGRGGGEYYGPDSAIAHCLQDWPECVDVQYLSGRDLQIADIKADNDAMAIYRWIG
Ga0210365_108328532	3300021351	Estuarine	MPRFEELRQILGQILQESPNCYWLYNQILNRLREDRPDILEGLEERGGKDYGHGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQIADIKADNEAMAIYRWIG
Ga0224496_101231211	3300022204	Sediment	MPRFEELREALSQILQERQNCYWLCYQILNRLRERNPEILEDLERTYGTGYGRGGGSPYRPDSAIAHCPQDWPEFVEVRYLLGRDLRIGYIMASDDVMGIYR
Ga0224495_100148882	3300022208	Sediment	MPRFEELREILGQILQESPNCYLLYDQILNRLREERPDILEGLEERGDKGYGRGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQVVDIKAANDAMAIYRWIGST
Ga0224506_100543803	3300022221	Sediment	MRGLQNREYFIGEKMPRFDELRDVLGKILQERPNCYWLCYQILKRLRELYPEIVEGLEERCETGYSRGGGTFYRPDNAIAHCLQDWPECVDVQYLFGRDIQVGDIRVPDEAVAVYRWIG
Ga0224506_100706811	3300022221	Sediment	EKMPRFEELREALSQILQERQNCYWLCYQILNRLRERNPEILEDLERTYGTGYGRGGGSPYRPDSAIAHCPQDWPEFVEVRYLLGRDLRIGYIMASDDVMGIYR
Ga0224506_104863441	3300022221	Sediment	MPRFEELRQILGQILQESPNCYWLYGQILNRLREVHPDILEGLEERDGKSYGQGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQIADIKADNDAMAIYRWIG
Ga0212121_100498712	3300022556	Anoxic Lake Water	MPRFEELRDVLGQILQERPNCYWLCSQILNRLRQLRPEIIEGLEKTDATGYSRGGGTYYRPDNAIAHCLCDWPECVDVQYLFGRDVQVGGVKAPDEAITVYRWIG
Ga0209742_100280392	3300027814	Marine Sediment	MPRFEEMREILGQILQESPNCFWLYDQILNRLREVRPDILEGLVERGDKGYGRGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQVADIKVDKDAMAIYRWIGST
Ga0209635_100999573	3300027888	Marine Sediment	MARFEEFREALGQILQERPNCYWLGYQIVEMLRERNPEILEGLEKKFATSYGRGGGDYYSTDSAIAHCLQDWPERVDVQYLLGRDLQIGNVKASDEAITIYRWIG
Ga0209635_101017235	3300027888	Marine Sediment	MPRFEEFREPLGQILQERPNCFWLPYQIVKRLRELNPEILEVLEKKFGTSYGRGGGDYYSTDSAIAHCLQDWPECVEVQYLLGRDLQIGDVKASDEAITIYRWIG
Ga0209635_101459462	3300027888	Marine Sediment	LGEILQERPNCYWLCYQILNRLRERNPEILERLEQKYGTGYGRGGGDYYRPDSAIANCLQDWPECVDVQYLFGQDLRVGNIRAIDDTMGIYRWIGETER
Ga0209635_103493023	3300027888	Marine Sediment	VKVLRERNPEILEVLEGKYSTSYGRGGGDYYQTDIAVAHCLQDWPECVEVQYLLGRDLQIGDVKASDEAVTIYRWIGNAES
Ga0209635_107124231	3300027888	Marine Sediment	MPRFEELREALGQILQERPNCYWLCYQVLNRLRERNPEILERLEQKYGMGYGRGGGDYYRPDSAIAHCLQDWPECVDVQYLFGQDLRVGDIRATDDTMGIYRWIGDTES
Ga0209635_108518012	3300027888	Marine Sediment	RERNPEILEVLEKKFGTSYGRGGGDYYSTDSAIAHCLQDWPESVDIQYLLGRDLQIGNVKAGDEAVTIYRWIG
Ga0209636_100158931	3300027893	Marine Sediment	MPRFEELRQILGQILQESPNCYWLYDQILNRLREVRPDILEDLEERGDKGYGRGGGEYYGPESAIAHCLRDWPECVDVQYLSGRDLQIAD
Ga0209636_101444282	3300027893	Marine Sediment	MPRFEEMREILGQILQESPNCYWLYDQILNRLREVRPDILEGLEERSGKSYGQGGGEYYGPDSAISHCLRDWPECVDVQYLSGRDLQIADIKADNAAMAIYRWIG
Ga0209636_101909533	3300027893	Marine Sediment	MPRFEELRQILGQILQESPNCYWLYDQILNRLRELRPDILEGLEERGGKSYGQGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQIADIKADNDT
Ga0209636_101929632	3300027893	Marine Sediment	MPRFEELRKILGQILQESPNCYWLYDQILNRLRELRPDILEGLEERSDKGYGRGGGEYYGPNSAIAHCLRDWPECVDVQYLSGRDLQIADIKAGNDAMAIYRWIG
Ga0209636_102062903	3300027893	Marine Sediment	MSRFEEFREALGQILQERPNCYWLSYQIVNRLREQNPEILEGLEKKYGTSYGRGGGDYYSTGSAISHCLQDWPECVDVQYLFGRDLQIGDVRATDDLMAIYRWIG
Ga0209636_102919112	3300027893	Marine Sediment	MPRFEELRQTLGQILQESPNCYWLYDQILNRLREVRPDILEGLEERGGKSYGHGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQIADIKVDNDAMAIYRWIG
Ga0209636_103914741	3300027893	Marine Sediment	MPRFEELRDILGQILQERPNCYWLCYQILNRLKELYPEILERLEKKYGTGYGRGGGDYYRPDSAIAHCLQDWPECVDVQYLFGRDLQIGDIRATDDIMGIYRWIGDTEI
Ga0209636_104658312	3300027893	Marine Sediment	MPRFEELREALGQILQERPNCYWLCYQILNRLRERNPEILERLEQKYGMGYGRGGGDYYRPDSAIAHCLQDWPEGVDVQYLFGQDLRVGNIRATDDTMGIYRWIGETES
Ga0209636_104922451	3300027893	Marine Sediment	MPRFEEFREALGQILQEMPNCYWLPYQIVKRLRERNPEILEVLEKKYSTSYGRGGGDYYSTDSAIAHCLQDWPECVEVQYLLGRDLQIGDVKASDEAITIYRWIG
Ga0209636_105799892	3300027893	Marine Sediment	MPRFEELRQILGQILQESPNCYWLYDQILNRLREVRPDILEGLEERSGKSYGQGGGEYYGPDSSLAHCLRDWPECVDVQYLSGRDLQIADIKADNDAMAIYRWIG
Ga0209636_108079462	3300027893	Marine Sediment	MPRFEEFRETLGQILQESPNCYWLSYQIVNRLRERNPEILEVLEEKYSTSYGRGGGDYYMPGSAIAHCLQDWPECVDVQYLFGRDLQIGDIRVPDEAVAVYRWIG
Ga0209636_109007341	3300027893	Marine Sediment	MPRFEEFREAIGQILQESPNCYWLPYQIVNRLRERNPEILEGLEEKYSTSYGRGGGDYYSTGSAIAHCLQDWPECVEVQYLLGRDLQIGDVKAGDEAITIYRWIG
Ga0209427_100243533	3300027901	Marine Sediment	MPRFEELRQILGQILQESPNCYWLYDQILNRLREVRPDILEGLEKRGGKSYGHGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQIADVKAENEAMAIYRWIGKTQS
Ga0209427_100311984	3300027901	Marine Sediment	MPRFEELREVLGQILQERPNCYWPCYQILNRLRDLKPQILERLEQKYGTAYGRGGGDYYRPDSAIAHCLQDWPECVDVQYLFARGLQIGDIVASDDTMGIYRWIA
Ga0209427_100375201	3300027901	Marine Sediment	ILQESPNCYWLYDQILNRLREVRPDILEGLEERGGKSYGQGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQIADMKADNDVMAIYRWIG
Ga0209427_100553663	3300027901	Marine Sediment	MARFEEFREALGQILQERPNCYWLGYQIVEMLRERNPEILEGLEKKFATSYGRGGGDYYSTDSAIAHCLQDWPERVDVQYLLGRDVQIGNVKASDEAITIYRWIG
Ga0209427_102056041	3300027901	Marine Sediment	MPRFEELRQILGQILQESPNCYWLYDQILNRLRELRPDILEGLEERGGKSYGQGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQIADIKADNDTMAIYRWIG
Ga0209427_102066994	3300027901	Marine Sediment	MPRFEELRQILGQILQESPNCYWLYDQILNRLREVRPDILEGLEERGGKSYGHGGGEYYGPSSAIAHCLRDWPECVDVQYLSGRDLQI
Ga0209427_102656142	3300027901	Marine Sediment	MPRFDELREDLGQILQERPNCYWLCYQILNRLRERNPEILEVLEEKYSTAYGRGGGDYYSTDSAIEHCLQDWPECVEVQYLLGRDLQIGDARASEEATAIYRWIG
Ga0209427_103349472	3300027901	Marine Sediment	MPRFEEFREPLGQILQERPNCFWLPYQIVKRLRELNPEILEVLEKKFGTSYGRGGGDYYSTDSAIAHCLQDWPECVEVQYLLGRDLQIGDVKAGDEAITIYRWIG
Ga0209427_103418691	3300027901	Marine Sediment	MARFEEFREALGQILQESPNCYWLSYQIVNRLRERNPEILEVLEEKYSTSYGRGGGDYYMPGSAIAHCLQDWPECVDVQYLFGRDL
Ga0209536_1002902702	3300027917	Marine Sediment	MPRFEELRQILGQILQESPNCYYLYDQILNRLREERPDILEGLEERSDKGYGHGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQIADIKADNNVMAIYRWIG
Ga0209536_1004740752	3300027917	Marine Sediment	MPRFEELRQILGQILQESPNCYWLYDQILNRLREVRPDILEGLEKRGGKSYGHGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQIADVKAENEAMAIYRWIDKTQS
Ga0209536_1032269061	3300027917	Marine Sediment	MPRFEEMREILGQILQESANCYWLYDQILNRLREVRPDILDGLEKRDGKSYGQGGGEYYGPDSAIAHCLRDWPECVDIQYLSGRDLQVADIKADNDAMAIYRWIGST
Ga0299915_100241374	3300030613	Soil	MPRFEELRDVLGQILQERPNCYWLSSQILNRLRQVRPEIIEGLEKTCGTGYSRGGGTYYRPDNAIAHCLCDWPECVDVQYLFGQDVQVGGVKATDEAIAVYRWIR
Ga0272442_100724444	3300030616	Marine Sediment	MPRFEELRQILGQILQESPNCYWLYDQILNRLREERPGILEDLEERSDKSYGHGGGEYYGPDSAIAHCLGDWPECVDVQYFSGRDLQTADKKAENEAMAIYRWIG
Ga0307927_10366061	3300030717	Soil	MPRFEELRQILGQILQESPNCYWLYDQILNRLREVCPDILEGLEERGGKSYGQGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQIADIKADNDAMVIYRWIG
Ga0315554_10197142	3300031255	Salt Marsh Sediment	MPRFEEFREAIGQILQERLNCYWLPYQIVNRLRERNPEILEVLEKKFGTSYGRGGGDYYSTDSAIAHCLQDWPECVEVQYLLGRDLQIGDVKASDEAITIYRWIGQTKS
Ga0307431_10151624	3300031278	Salt Marsh	MPRFEEFREAIGQILQERPNYYWLPYQIVKLLRERNPEILEGLEKKFGTSYGRGGGDYYSTDSAIAHCLQDWPERVDIQYLLGQDLQIGDVKASDEAMTIYRWIG
Ga0307420_10397742	3300031281	Salt Marsh	MSRFEELRPILGQILQESPNCYWLYDQILNRLREVRPDILEGLEERDGKGYGQGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLKIADIKADDNYMAIYRWIG
Ga0307435_11146982	3300031357	Salt Marsh	MPRFEELREALGQILQESPNCYWLCDQILNRLRERCPEILEGLEEREDKGYGKGGGEYYRPDSAIAHCLRDWPECVDVQYLLGRNLQIGDVRATDEAMAIYRWIG
Ga0307426_12577591	3300031359	Salt Marsh	NCYWLYNQILNRLREERPDILEGLEERSGKDYGHGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLHIADIKADNEAMAIYRWIG
Ga0307445_100322452	3300031364	Salt Marsh	MPRFEELRQILGQILQESPNCYWLYNQILNRLREERPDILEGLEERSGKDYGHGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLHIADIKADNEAMAIYRWIG
Ga0307443_11571831	3300031365	Salt Marsh	MPRFEEFREAIGQILQENPNCYWLPYQIVKLLRERNPEILEGLEKKFGTSYGRGGGDYYSTDSAIAHCLQDWHECVEVQYLLGRDLQIGDVKASDEAVTIYRWIGKTES
Ga0307443_11676752	3300031365	Salt Marsh	MPRSEELREVLGQILQQKPNCYWLYNQVLNRLREVRPDILDGLEEIGSKGYGRGGGEYYRPDSAIAHCLQDWPECVDVQYLSGLDLQIADIKVDNDAIAIYRWIG
Ga0307434_11420191	3300031379	Salt Marsh	NYYWLPYQIVKLLRERNPEILEGLEKKFGTSYGRGGGDYYSTDSAIAHCLQDWPECVEVQYLLGRDLQIGDVKASDEAITIYRWIGQTKS
Ga0307419_103183901	3300031537	Salt Marsh	MPRFEEFQEAIGQILQERPNCYWLPYQITKLLRERNPEILEVLEKKFGTSYGRGGGDYYSTDSAIAHCLQDWPECVEVQYLLGRDLQIGD
Ga0307380_100639311	3300031539	Soil	VLGQILQESPNCYWLCYQILNRLRELHPEILDGLEARYGTGYGRDGGAPYRPDSAIAQSLSDWPECVDVQYLFGRDLQIGTIRATADTMGIYRWIG
Ga0307380_100829452	3300031539	Soil	MPRFEELRQILGQILQESPNCYWLYDQILNRLREVRPDILEGFEERSGKSYGQGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQIVDIKADNAAMAIYRWIG
Ga0307380_113513451	3300031539	Soil	MPRFEELREALGQILQESPNCYWLCDQILNRLRERCPEILEGLEEREGKGYGKGGGEYYRPDSAIAHCLRDWPECVDVQYLLGRDLQIGDVRVTDEAMAIYRWIG
Ga0315548_10021451	3300031551	Salt Marsh Sediment	MPRFEEFREAIGQILQENPNCYWLPYQIVKLLRERNPEILEGLEKKFGTSYGRGGGDYYSTDSAIAHCLQDWHECVEVQYLLGRDLQIGDVKASDEAVTIYRWIGKTE
Ga0315548_10143606	3300031551	Salt Marsh Sediment	MPRFEEFREALGQILQERPNCYWLSHQIVNQLRERNPEILEGLEKKYSTSYGRGGGDYYSTSSAIAHCLQDWPECVDVQYLFGRDLRIGNIKATDDLMGIYRWIS
Ga0315544_10115166	3300031554	Salt Marsh Sediment	VGYFLILQESPNCYWLYDQILNRLREVRPDILEGLEERGGKGYGHGDGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLQIADIKADNDAMAIYRWIG
Ga0315541_11185162	3300031586	Salt Marsh Sediment	MPRFEEFREAIGQILQERPNCYWLPYQIVKLLRERNPEILEVLEKKFGTSYGRGGGDYYSTDSAIAHCLQDWPECVEVQYLLGRDLQIGDVKASDEAITIYRWIG
Ga0315545_10922264	3300031624	Salt Marsh Sediment	MPRFEEFREALGQILQERPNCYWLSHQIVNQLRERNPEILEGLEKKYSTSYGRGGGDYYSTSSAIAHCLQDWPECVDVQYLFGRDLRIGNIKATD
Ga0315533_11314471	3300031643	Salt Marsh Sediment	MPRFEEFREAIGQILQERPNYYWLPYQIVKLLRERNPEILEGLEKKFGTSYGRGGGDYYSTDSAIAHCLQDWPERVDIQYLLGQDLQIGDVKASDEAMTIYRW
Ga0315543_11030731	3300031651	Salt Marsh Sediment	MPRFEEFREALGQILQERPNCYWLSHQIVNQLRERNPEILEGLEKKYSTSYGRGGGDYYSTSSAIAHCLQDWPECVDVQYLFGRDLRIGNIKATDDLMG
Ga0315553_101248912	3300031652	Salt Marsh Sediment	MSRFEELRPILGQILQESPNCYWLYDQILNRLREVRPDILEGLEERDGKGYGQGGGEYYGPDSAIAHCLRDWPECVDVQYLSGRDLKIADIKADD
Ga0315553_103043101	3300031652	Salt Marsh Sediment	MPRFEEFQEAIGQILQERPNCYWLPYQITKLLRERNPEILEVLEKKFGTSYGRGGGDYYSTDSAIAHCLQDWPECVEVQYLLGLDLQIGDVKASDEA
Ga0315549_11797562	3300031654	Salt Marsh Sediment	IVKLLRERNPEILEVLEKKFGTSYGRGGGDYYSTDSAIAHCLQDWPECVEVQYLLGRDLQIGDVKASDEAITIYRWIG
Ga0315294_100942463	3300031952	Sediment	MPRFEELREVLGQILQERPNCYWLCYQILNRLRELHPEILEELEKRYGTGYGQGGGAPYRPDSAIAHCLRDWPECVDVQCLFGRDLQIGDIRASDDVMVVYRWIC
Ga0315296_100029906	3300032020	Sediment	MPRFEELRDVLGQILQERPNCYWLSSQILNRLRQVRPEIIEGLEKTCGTGYSRGGGTYYRPDNAIAHCLCDWPERVDVQYLFGQDVQVGGVKATDEAVAVYRWIR
Ga0315296_100159934	3300032020	Sediment	MPRFEELRQVLGQILQEKPNCYWLYDQILNRLREVRPEILEGLEERGGKGYGQGGGEYYGPDSAIAHCLRDWPECVDVQYLLGQDLLIADIKASGEAMVIYRWIS
Ga0315289_100343061	3300032046	Sediment	MPRFEELREALGQILQERPNCYWLCYQILNRLRERNPEILERLEQKYGTGYGRGGGDYYRPDSAIAHCLQDWPECVDVQYLFGQDLRVGDIMASDDIMGIYRWIF
Ga0315551_102475461	3300032062	Salt Marsh Sediment	MPRFEEFREALGQILQEKPNCYWLSYQIINQLREQNPEILEGLEEKYSTSYGRGGGDYYSTDSAIAHCLQDWPECVEVQYLLGRDLQIGDVKASDEAVTIYRWIGKTES
Ga0315279_100024228	3300032070	Sediment	MPRFEELRDVLAQILQERPNCYCFSSQILNRLRELRPEIIEGLEKTDATGYSRGGGTYYRPHNAIAHCLCDWPECVDVQYLFGQDVQVGGVKTTDEAIAVYRWIG
Ga0315277_117225382	3300032118	Sediment	ILQERPNCYCLSSQILNRLRELRPEIIEGLEKTDATGYSRGGGTYYRPDNAIAHCLCDWPECVDVQYLFGQDVQVGGVKTSDEAIAVYRWIR
Ga0299912_100235553	3300033489	Soil	MPRFEEFREAMRQILQERPNCYWLPYQIVKLLRERNPEILEVLEKKFGTSYGRGGGDYYSTNSAIEHCLQDWPECVDIQYLLGRDLQIGDVKASDEAVTIYRWIGQTKS
Ga0334965_0000082_73172_73489	3300033991	Sediment	MARFEELRNVLRQILQERPNCYWLSSQILNRLRELRPEIVEGLEKRDATGYSRGGGTFYRPDNAIAHCLSDWPECVDVQYLFGQDVQVGGTRATDEAIAVYRWIG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters