Metagenome / Metatranscriptome Family F080806

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080806
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	65 residues
Representative Sequence	MHHIDTAATGAIGFTAPIAAAAISLDPTLDLELRVASMIIGILVGLASFAKLAYDLYADHKNRNK
Number of Associated Samples	79
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.46 %
% of genes near scaffold ends (potentially truncated)	21.93 %
% of genes from short scaffolds (< 2000 bps)	54.39 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.281 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (67.544 % of family members)
Environment Ontology (ENVO)	Unclassified (85.088 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (86.842 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.52% β-sheet: 0.00% Coil/Unstructured: 35.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF13385	Laminin_G_3	9.65
PF05838	Glyco_hydro_108	8.77
PF12850	Metallophos_2	6.14
PF04404	ERF	4.39
PF09374	PG_binding_3	3.51
PF08241	Methyltransf_11	1.75
PF02945	Endonuclease_7	1.75
PF01844	HNH	1.75
PF03796	DnaB_C	0.88
PF10926	DUF2800	0.88
PF05050	Methyltransf_21	0.88
PF00149	Metallophos	0.88
PF13535	ATP-grasp_4	0.88
PF13884	Peptidase_S74	0.88
PF03592	Terminase_2	0.88
PF02274	ADI	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG3926	Lysozyme family protein	General function prediction only [R]	8.77
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.88
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.88
COG1834	N-Dimethylarginine dimethylaminohydrolase	Amino acid transport and metabolism [E]	0.88
COG2235	Arginine deiminase	Amino acid transport and metabolism [E]	0.88
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.88
COG4874	Uncharacterized conserved protein	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.28 %
All Organisms	root	All Organisms	37.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.28 %
cellular organisms	root	All Organisms → cellular organisms	34.21 %
Viruses	superkingdom	All Organisms → Viruses	3.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.28 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.33 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.63 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.28 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.44 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.63 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.28 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	25.44 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.63 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.28 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	25.44 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.63 %
Methylacidiphilae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae	0.88 %
Candidatus Peregrinibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Peregrinibacteria	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.28 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	25.44 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	2.63 %
Candidatus Peribacteria	class	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Peregrinibacteria → Candidatus Peribacteria	0.88 %
Methylacidiphilales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.28 %
Aphanizomenonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae	25.44 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.63 %
Candidatus Peribacterales	order	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Peregrinibacteria → Candidatus Peribacteria → Candidatus Peribacterales	0.88 %
Methylacidiphilaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.28 %
Aphanizomenon	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon	25.44 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.63 %
Candidatus Peribacteraceae	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Peregrinibacteria → Candidatus Peribacteria → Candidatus Peribacterales → Candidatus Peribacteraceae	0.88 %
Methylacidiphilum	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Methylacidiphilum	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.28 %
Aphanizomenon flos-aquae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae	25.44 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.63 %
unclassified Candidatus Peribacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Peregrinibacteria → Candidatus Peribacteria → Candidatus Peribacterales → Candidatus Peribacteraceae → unclassified Candidatus Peribacteraceae	0.88 %
Methylacidiphilum kamchatkense	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Methylacidiphilum → Methylacidiphilum kamchatkense	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.28 %
Aphanizomenon flos-aquae WA102	isolate	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	25.44 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.63 %
Methylacidiphilum kamchatkense Kam1	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Methylacidiphilum → Methylacidiphilum kamchatkense → Methylacidiphilum kamchatkense Kam1	0.88 %
Candidatus Peribacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Peregrinibacteria → Candidatus Peribacteria → Candidatus Peribacterales → Candidatus Peribacteraceae → unclassified Candidatus Peribacteraceae → Candidatus Peribacteraceae bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000439\|TBL_comb48_EPIDRAFT_1043159	Not Available	1703	Open in IMG/M
3300002092\|JGI24218J26658_1001054	All Organisms → cellular organisms → Bacteria	9658	Open in IMG/M
3300002930\|Water_100004	Not Available	66257	Open in IMG/M
3300002930\|Water_102217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	3392	Open in IMG/M
3300003800\|Ga0007860_1000003	Not Available	34646	Open in IMG/M
3300003800\|Ga0007860_1001661	All Organisms → cellular organisms → Archaea	2105	Open in IMG/M
3300003802\|Ga0007840_1001638	Not Available	1398	Open in IMG/M
3300003806\|Ga0007864_1004768	Not Available	1194	Open in IMG/M
3300003808\|Ga0007844_1000007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	23006	Open in IMG/M
3300003808\|Ga0007844_1010452	Not Available	624	Open in IMG/M
3300003812\|Ga0007861_1010428	Not Available	849	Open in IMG/M
3300003812\|Ga0007861_1020346	Not Available	564	Open in IMG/M
3300003814\|Ga0007877_1000142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	13944	Open in IMG/M
3300003815\|Ga0007856_1000016	Not Available	17568	Open in IMG/M
3300003815\|Ga0007856_1006123	Not Available	869	Open in IMG/M
3300003818\|Ga0007841_101445	Not Available	614	Open in IMG/M
3300003820\|Ga0007863_1020908	Not Available	556	Open in IMG/M
3300003823\|Ga0007875_1039552	Not Available	503	Open in IMG/M
3300003943\|Ga0007808_1000002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	8057	Open in IMG/M
3300003943\|Ga0007808_1008443	Not Available	523	Open in IMG/M
3300004448\|Ga0065861_1164838	Not Available	877	Open in IMG/M
3300004460\|Ga0066222_1178297	Not Available	588	Open in IMG/M
3300004460\|Ga0066222_1178304	Not Available	875	Open in IMG/M
3300004461\|Ga0066223_1093731	Not Available	1308	Open in IMG/M
3300004461\|Ga0066223_1093732	Not Available	2927	Open in IMG/M
3300004461\|Ga0066223_1381015	Not Available	684	Open in IMG/M
3300004687\|Ga0065174_1053556	Not Available	762	Open in IMG/M
3300004689\|Ga0065172_1010143	Not Available	645	Open in IMG/M
3300004690\|Ga0065175_1004145	Not Available	987	Open in IMG/M
3300004777\|Ga0007827_10117761	Not Available	594	Open in IMG/M
3300004777\|Ga0007827_10118359	Not Available	593	Open in IMG/M
3300004806\|Ga0007854_10054640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1961	Open in IMG/M
3300004806\|Ga0007854_10178768	Not Available	917	Open in IMG/M
3300004807\|Ga0007809_10024064	Not Available	2117	Open in IMG/M
3300004807\|Ga0007809_10250784	Not Available	502	Open in IMG/M
3300006072\|Ga0007881_1123183	Not Available	640	Open in IMG/M
3300006104\|Ga0007882_10120408	Not Available	956	Open in IMG/M
3300006105\|Ga0007819_1006133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	3266	Open in IMG/M
3300006107\|Ga0007836_1000209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	14254	Open in IMG/M
3300006108\|Ga0007862_1010887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	2115	Open in IMG/M
3300006118\|Ga0007859_1020228	Not Available	1468	Open in IMG/M
3300006118\|Ga0007859_1093562	Not Available	602	Open in IMG/M
3300006119\|Ga0007866_1034469	Not Available	994	Open in IMG/M
3300006121\|Ga0007824_1111331	Not Available	514	Open in IMG/M
3300006122\|Ga0007837_1028846	Not Available	942	Open in IMG/M
3300006122\|Ga0007837_1075411	Not Available	569	Open in IMG/M
3300006123\|Ga0007852_1107757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	616	Open in IMG/M
3300006123\|Ga0007852_1130271	Not Available	544	Open in IMG/M
3300006128\|Ga0007828_1001310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	5858	Open in IMG/M
3300006128\|Ga0007828_1028783	Not Available	1161	Open in IMG/M
3300009154\|Ga0114963_10001380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	16766	Open in IMG/M
3300009154\|Ga0114963_10021988	Not Available	4244	Open in IMG/M
3300009154\|Ga0114963_10026603	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3831	Open in IMG/M
3300010157\|Ga0114964_10160597	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Methylacidiphilum → Methylacidiphilum kamchatkense → Methylacidiphilum kamchatkense Kam1	1089	Open in IMG/M
3300010885\|Ga0133913_10416752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	3549	Open in IMG/M
3300010885\|Ga0133913_11609051	Not Available	1639	Open in IMG/M
3300012691\|Ga0157569_1087021	Not Available	984	Open in IMG/M
3300012697\|Ga0157578_1046868	Not Available	574	Open in IMG/M
3300013286\|Ga0136641_1000057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	42525	Open in IMG/M
3300013286\|Ga0136641_1152269	Not Available	625	Open in IMG/M
3300016692\|Ga0180040_1022301	Not Available	520	Open in IMG/M
3300020164\|Ga0194037_1045187	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300021131\|Ga0214206_1000016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	42628	Open in IMG/M
3300021131\|Ga0214206_1003408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	3031	Open in IMG/M
3300022591\|Ga0236341_1002829	Not Available	8554	Open in IMG/M
3300025330\|Ga0208615_100002	All Organisms → cellular organisms → Bacteria	14469	Open in IMG/M
3300025330\|Ga0208615_102635	Not Available	754	Open in IMG/M
3300025336\|Ga0208619_103821	Not Available	1089	Open in IMG/M
3300025337\|Ga0208252_100016	Not Available	31297	Open in IMG/M
3300025337\|Ga0208252_100914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	3218	Open in IMG/M
3300025339\|Ga0208502_1000087	All Organisms → cellular organisms → Bacteria	9658	Open in IMG/M
3300025340\|Ga0208866_1000017	All Organisms → cellular organisms → Bacteria	10372	Open in IMG/M
3300025346\|Ga0208737_1000155	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3278	Open in IMG/M
3300025346\|Ga0208737_1000652	Not Available	1820	Open in IMG/M
3300025355\|Ga0208254_1000650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Peregrinibacteria → Candidatus Peribacteria → Candidatus Peribacterales → Candidatus Peribacteraceae → unclassified Candidatus Peribacteraceae → Candidatus Peribacteraceae bacterium	3415	Open in IMG/M
3300025356\|Ga0208870_1000012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	44914	Open in IMG/M
3300025365\|Ga0208621_1020995	Not Available	749	Open in IMG/M
3300025366\|Ga0208505_1000021	Not Available	55371	Open in IMG/M
3300025372\|Ga0207957_1000096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	20962	Open in IMG/M
3300025372\|Ga0207957_1000763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7206	Open in IMG/M
3300025379\|Ga0208738_1002815	Not Available	3561	Open in IMG/M
3300025382\|Ga0208256_1006381	Not Available	1992	Open in IMG/M
3300025385\|Ga0207956_1010165	Not Available	1428	Open in IMG/M
3300025387\|Ga0207959_1003891	Not Available	3012	Open in IMG/M
3300025389\|Ga0208257_1009621	Not Available	1642	Open in IMG/M
3300025392\|Ga0208380_1012753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1468	Open in IMG/M
3300025399\|Ga0208107_1090308	Not Available	506	Open in IMG/M
3300025405\|Ga0208381_1000343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	17136	Open in IMG/M
3300025410\|Ga0208875_1003063	All Organisms → Viruses → Predicted Viral	3587	Open in IMG/M
3300025415\|Ga0208868_1000027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	45272	Open in IMG/M
3300025417\|Ga0208616_1000689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	8463	Open in IMG/M
3300025417\|Ga0208616_1052283	Not Available	586	Open in IMG/M
3300025421\|Ga0207958_1000550	Not Available	11344	Open in IMG/M
3300025421\|Ga0207958_1006030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	2378	Open in IMG/M
3300025421\|Ga0207958_1026748	Not Available	917	Open in IMG/M
3300025424\|Ga0208617_1005778	Not Available	2899	Open in IMG/M
3300025426\|Ga0208739_1000459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	12110	Open in IMG/M
3300025598\|Ga0208379_1018354	Not Available	2004	Open in IMG/M
3300025598\|Ga0208379_1073775	Not Available	847	Open in IMG/M
3300025778\|Ga0208388_1025798	Not Available	915	Open in IMG/M
3300025781\|Ga0208386_1018767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1071	Open in IMG/M
3300027741\|Ga0209085_1004755	Not Available	7236	Open in IMG/M
3300027741\|Ga0209085_1092471	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1341	Open in IMG/M
3300027777\|Ga0209829_10028410	All Organisms → cellular organisms → Bacteria	3181	Open in IMG/M
3300027782\|Ga0209500_10212206	Not Available	867	Open in IMG/M
3300027896\|Ga0209777_10104489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	2408	Open in IMG/M
3300027896\|Ga0209777_10294473	Not Available	1257	Open in IMG/M
3300027896\|Ga0209777_10363264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1099	Open in IMG/M
3300027896\|Ga0209777_10550037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	843	Open in IMG/M
3300027896\|Ga0209777_10806562	Not Available	658	Open in IMG/M
3300031813\|Ga0316217_10023204	Not Available	4194	Open in IMG/M
3300032677\|Ga0316227_1000686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	44645	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	92.98%
Marine	Environmental → Aquatic → Marine	7.02%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	77.19%
Lake	Environmental → Aquatic → Freshwater → Lake	15.79%
Coastal	Environmental → Aquatic → Marine → Coastal	5.26%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	68.42%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	15.79%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.26%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	4.39%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.63%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.75%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.75%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	67.54%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	8.77%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	5.26%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	4.39%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.51%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.63%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.63%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	1.75%
Estuary Water	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water	1.75%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	0.88%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002930	Estuary water microbial communities from Pearl Estuary, Zhujiang, China	Environmental	Open in IMG/M
3300003800	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jul08	Environmental	Open in IMG/M
3300003802	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Oct07	Environmental	Open in IMG/M
3300003806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07	Environmental	Open in IMG/M
3300003808	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Aug07	Environmental	Open in IMG/M
3300003812	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08	Environmental	Open in IMG/M
3300003814	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09	Environmental	Open in IMG/M
3300003815	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07	Environmental	Open in IMG/M
3300003818	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Jul07	Environmental	Open in IMG/M
3300003820	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07	Environmental	Open in IMG/M
3300003823	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Aug09	Environmental	Open in IMG/M
3300003943	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Aug07	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300004687	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul08 (version 2)	Environmental	Open in IMG/M
3300004689	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE20Aug07 (version 2)	Environmental	Open in IMG/M
3300004690	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Jul07 (version 2)	Environmental	Open in IMG/M
3300004777	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Jul07	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006104	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1	Environmental	Open in IMG/M
3300006105	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09	Environmental	Open in IMG/M
3300006107	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Oct07	Environmental	Open in IMG/M
3300006108	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07	Environmental	Open in IMG/M
3300006118	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul07	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006121	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE05Oct08	Environmental	Open in IMG/M
3300006122	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE31Jul07	Environmental	Open in IMG/M
3300006123	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH28Sep08	Environmental	Open in IMG/M
3300006128	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012691	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES070 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012693	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES075 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012697	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES082 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013286	Freshwater microbial communities from Elizabeth Lake, Yosemite National Park, California, USA - 13020-23Y	Environmental	Open in IMG/M
3300016692	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES100 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020164	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L304-6m	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300022591	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Summer S2	Environmental	Open in IMG/M
3300025330	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE12Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025336	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025337	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025339	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025340	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE20Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025346	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025355	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025356	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025365	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH26May08 (SPAdes)	Environmental	Open in IMG/M
3300025366	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025382	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025385	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025387	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025389	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025392	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025399	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025405	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE13Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025410	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08 (SPAdes)	Environmental	Open in IMG/M
3300025415	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025417	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025421	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025424	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Nov07 (SPAdes)	Environmental	Open in IMG/M
3300025426	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025598	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025778	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025781	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300032677	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18019	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TBL_comb48_EPIDRAFT_10431592	3300000439	Freshwater	MIHHLDTAATGAIGFTAPIAAATISLDPTLDLELRVTSMIIGILVGLASFAKLAYDIWDDHRKREK*
JGI24218J26658_10010545	3300002092	Lentic	MHHLNTAATGAIGFTTPLAAAAISLDPMLDLELRVVSMVIGILVGLASFAKLAYDLYADHKNRNK*
Water_10000424	3300002930	Estuary Water	MVHHIDTAATGAIGMTAPLAAAAISLDPMIDLELRIASMVIGIFVGLASFAKLLYDLYKDHKNRNK*
Water_1022173	3300002930	Estuary Water	MHHLNTATTGAIGFTTPLAAAAISLDPMLDLELRVVSMVIGILVGLASFAKLAYDLYADHKNRNK*
Ga0007860_100000346	3300003800	Freshwater	MHHIDTAATGAIGMTAPIAAAAISFDPTLDLELRIISMAIGIFVGLASFAKLAYDLYADHKNRKK*
Ga0007860_10016612	3300003800	Freshwater	MMHHFDTAATGAIGMTAPLAAAAISLDPMLDLELRLASMVIGILVGLASFAKLAYDLYADHKNRNK*
Ga0007840_10016383	3300003802	Freshwater	MIHHTDTIMTGFVGTTAPIAAATISLDPALDLELRVLSLLIGIFVGIASFAKLIYDIWADHRSRNK*
Ga0007864_10047685	3300003806	Freshwater	TAATGAIGFTAPIAAAAISLDPTLDLELRLASMVIGILVGLASFAKLAYDLYADHKNRNK
Ga0007844_100000713	3300003808	Freshwater	MMHHFDTAATGAIGFTAPVAAAAISLDPMLDLELRVASLIIGILVGIASFSKLIYDIWADHKARSKK*
Ga0007844_10104521	3300003808	Freshwater	TGAIGFTAPIAAATISLDPTLDLELRVLSLIIGIFVGVASFAKLIYDIWADHKNRNRK*
Ga0007861_10104282	3300003812	Freshwater	MHHFDTAATGAIGFTAPVAAAAISLDPMLDLELRVASLIIGILVGIASFSKLIYDIWADHKARSKK*
Ga0007861_10203461	3300003812	Freshwater	MTPHIDTAATGAIGFTAPIAAATISLDPTLDLELRVLSLIIGIFVGXASFAKLXYDIWADHKNRNRKKPHTSLQ
Ga0007877_10001425	3300003814	Freshwater	MIHHTDTVLTGFIGTTAPLAAATISLDPALDLELRILSLVIGIFVGLASFAKLIYDIWADHKNRNK*
Ga0007856_100001615	3300003815	Freshwater	MVHHLDTAATGAIGFAAPIAAATLSLDATLDLEMRIASMAVGILVGLASFAKLCYDIWADHKNREK*
Ga0007856_10061232	3300003815	Freshwater	MMHHFDTAATGAIGFTAPVAAAAISLDPMLDFELRLASLLIGILVGIISFAKLCYDLYADHKNRNK*
Ga0007841_1014452	3300003818	Freshwater	MQHLNTAATGVIGFTTPLAAATLSLDPNLDLELRVASMVIGIVVGILSLIKLVCDFVSDRKEKQ*
Ga0007863_10209082	3300003820	Freshwater	MHHFDTAATGAIGFTAPVAAAAISLDPMLDFELRLASLLIGILVGIISFAKLCYDLYADHKNRNK*
Ga0007875_10395521	3300003823	Freshwater	LVMHHIDTAATGAIGFTAPIAAAAISLDPTLDLELRLASMVIGILVGLASFAKLAYDLYADHKNRNK*
Ga0007808_100000215	3300003943	Freshwater	MVHHIDTAATGAIGFTAPIAAATLSLDPTLDLEMRIASMVIGILVGLASFAKLCYDIWADHKNREK*
Ga0007808_10084432	3300003943	Freshwater	MAPHIDTAATGAIGFTAPIAAATISLDPALDLELRVLSLIIGIFVGVASFAKLIYDIWADHKNRNRKKPHTSLQ
Ga0065861_11648382	3300004448	Marine	MIHHIDTAATGAIGFTAPIAAAAISLDPMIDLELRLASMIIGILVGLASFAKLAYDLYADHKNRNK*
Ga0066222_11782972	3300004460	Marine	MINHIDSAATGAIGFTAPIAAAAISLDPTLDLELRLASMVIGILVGLASFAKLAYDLYADHKNRNK*
Ga0066222_11783043	3300004460	Marine	MFHHSETLLTGAIGTTAPIAAAAISLDPMLDLELRLASMVIGILVGLASFAKLAYDLYADHKNRSK*
Ga0066223_10937312	3300004461	Marine	MMHHFDTAATGAIGFTTPIAAAAISLDPMLDLELRLASLIIGIFVGLASFAKICYDIYKDHKKRNK*
Ga0066223_10937321	3300004461	Marine	MMHHFDTAATGAIGFTTPIAAAAISLDPMLDLELRLVSLIIGIFVGLASFSKICYDKILKERRKNK*
Ga0066223_13810151	3300004461	Marine	MMHHIDTAATGAIGFTAPIAAAAISLDPMLDLELRLASMIIGILVGLASFAKLAYDLYADHKNRNK*
Ga0065174_10535562	3300004687	Freshwater	MHHIDTAATGAIGFTAPIAAAAISLDPTLDLELRLASMVIGILVGLASFAKLAYDLYADHKNRNK*
Ga0065172_10101432	3300004689	Freshwater	MAPHIDTAATGAIGFTAPIAAATISLDPALDLELRVLSLIIGIFVGIASFAKLVYDIWADHKNRNRK*
Ga0065175_10041452	3300004690	Freshwater	MHHIDTAATGAIGFTAPIAAAAISLDPTLDLELRVASMIIGILVGLASFAKLAYDLYADHKNRNK*
Ga0007827_101177612	3300004777	Freshwater	MTPHIDTAATGAIGFTAPIAAATISLDPALDLELRVLSLIIGIFVGIASFAKLVYDIWADHKNRNRK*
Ga0007827_101183592	3300004777	Freshwater	MHHFDTAATGAIGFTAPVAAAAISLDPMLDFELRLASLLIGILVGIISFAKLCYDLYAD
Ga0007854_100546402	3300004806	Freshwater	MHHIDTATTGAIGMTAPIAAAAISLDPTLDLELRIVSMIIGIFVGLASFAKLAYDLYADHKNRNK*
Ga0007854_101787682	3300004806	Freshwater	MHHFDTAATGAIGMTAPLAAAAISLDPMLDLELRLASMVIGILVGLASFAKLAYDLYADHKNRNK*
Ga0007809_100240641	3300004807	Freshwater	MTPHIDTAATGAIGFTAPIAAATISLDPTLDLELRVLSLIIGIFVGVASFAKLIYDIWADHKNRNRK*
Ga0007809_102507842	3300004807	Freshwater	MAPHIDTAATGAIGFTTPIVAATISLDPALDLELRVLSLIIGIFVGVASFAKLVYDIWADHKNRNRK*
Ga0007881_11231831	3300006072	Freshwater	MHHIDTAATGAIGFTAPMAAAAISLDPMLDLELRVASMIIGILVGLASFAKLAYDLY
Ga0007882_101204083	3300006104	Freshwater	MMHHLDTAATGAIGFTAPMAAAAISLDPMLDLELRVASMIIGILVGLASFAKLAYDLYADHKNRNK*
Ga0007819_10061334	3300006105	Freshwater	MMHHIDTAATGAIGMTAPLAAAAISLDPMLDLELRVASMVIGILVGLASFAKLAYDLYADHKNRNK*
Ga0007836_100020917	3300006107	Freshwater	MTGFVGTTAPIAAATISLDPALDLELRVLSLLIGIFVGIASFAKLIYDIWADHRSRNK*
Ga0007862_10108873	3300006108	Freshwater	MIHHTDTVLTGFIGTTTPLAAATISLDPALDLELRILSLVIGIFVGLASFAKLIYDIWADHRNRSQK*
Ga0007859_100046710	3300006118	Freshwater	MTAPLAAATISLDPSLDLELRIVSMVIGIFVGIASFAKLIYDIWADHNDRNQK*
Ga0007859_10202283	3300006118	Freshwater	MMHHLDTAATGAIGFTAPIAAAAISLDPMLDLELRVASMIIGILVGLASFAKLAYDLYADHKNRNK*
Ga0007859_10935622	3300006118	Freshwater	LLDSYQNIHNKVMVHHLDTAATGAIGFAAPIAAATLSLDATLDLEMRIASMAVGILVGLASFAKLCYDIWADHKNREK*
Ga0007866_10344693	3300006119	Freshwater	MAPHIDTATTGAIGFATPIAAATLSLDPSLDLELRVLSLLIGIFVGIASFAKLVYDIWADHKNRTRK*
Ga0007824_11113312	3300006121	Freshwater	MVHHLDTAATGAIGFTTPIAAAAISLDPMLDFELRLASLLIGILVGIISFAKLCYDLWADHKNRN
Ga0007837_10288462	3300006122	Freshwater	MAPHIDTAATGAIGFTAPIAAATISLDPALDLELRVLSLIIGIFVGVASFAKLIYDIWADHKNRNRK*
Ga0007837_10754112	3300006122	Freshwater	IDTAATGAIGFTAPIAAATISLDPALDLELRVLSLIIGIFVGIASFAKLVYDIWADHKNRTRK*
Ga0007852_11077571	3300006123	Freshwater	MHHIDTATTGAIGMTVPIAAAAISLDPTLDLELRIVSMIIGILVGLASFAKLVYDLYKDHQNRNK*
Ga0007852_11302712	3300006123	Freshwater	MVHHLDTAATGAIGFTTPIAAAAISLDPMLDFELRLASLLIGILVGIISFAKLCYDLWADHKNRNK*
Ga0007828_10013102	3300006128	Freshwater	MMHHIDTAATGAIGFTAPVAAAAISLDPMLDFELRLASLLIGILVGIISFAKLCYDLYADHKNRNK*
Ga0007828_10287831	3300006128	Freshwater	ATGFVGMTAPLAAATISLDPSLDLELRIVSMVIGIFVGIASFAKLIYDIWADHNDRNQK*
Ga0114963_100013809	3300009154	Freshwater Lake	MVHHVDTAATGAVGMTAPLAAATLSLDPTLDLELRIISMVIGIFVGLASFAKLVYDIWYDHKNKK*
Ga0114963_100219884	3300009154	Freshwater Lake	MHHFDTAATGIIGFTTPIAAAAISLDPMLDFELRLASLIIGIFVGIASFAKLIYDIRADHKYRNKK*
Ga0114963_100266034	3300009154	Freshwater Lake	MTPHIDTAATGMIGFTTPIAAAAISLDPMLDLELRVASLIIGILVGLASFSKLIYDIWADHKNRNK*
Ga0114964_101605974	3300010157	Freshwater Lake	HHFDTAATGIIGFTTPIAAAAISLDPMLDFELRLASLIIGIFVGIASFAKLIYDIWADRKYRNKK*
Ga0133913_104167522	3300010885	Freshwater Lake	MHHIDTATTGAIGMTAPIAAAAISLDPTLDLELRIISMIIGILVGLASFAKLVYDLYKDHQNRNK*
Ga0133913_116090512	3300010885	Freshwater Lake	MVVDFFKFPSSKKMHHIDTAATGAIGFTAPLAAAAISFDPTLDLELRVTSMLIGICVGLASLAKLVYDIYADHMARNKK*
Ga0157569_10870213	3300012691	Freshwater	MMHHLDTAATGAIGFTAPIAAAAISLDPMLDLELRVASMIIGILVGLASFAKLAYDLYAD
Ga0157573_10229661	3300012693	Freshwater	MMHHLDTAATGAIGFTAPIAAAAISLDPMLDLELRVASMIIGILVGLASFAKLA
Ga0157578_10468682	3300012697	Freshwater	MMHHLDTAATGAIGFTAPIAAAAISLDPMLDLELRVASMIIGILVGLASFAKLAYDLYADHKNR
Ga0136641_100005736	3300013286	Freshwater	MHHLDTAATGAIGFTAPIAAAAISLDPMLDLELRVASMVIGILVGLASFAKLAYDLYADHKNRNK*
Ga0136641_11522692	3300013286	Freshwater	DTAATGAIGMTAPIAAAAISLDPMIDLELRVASMVIGILVGLASFAKLAYDLYADHKNRNK*
Ga0180040_10223011	3300016692	Freshwater	MMHHLDTAATGAIGFTAPIAAAAISLDPMLDLELRVASMIIGILVGLASFAKLAYDLYADHKNRNK
Ga0194037_10451873	3300020164	Anoxic Zone Freshwater	MFHHTDTIFTGAIGSSAPIAAVTLSFDPALDLELRIISLVIGIFVGLVSLGKLIYDIWSNHKKKSEK
Ga0214206_100001655	3300021131	Freshwater	MIHHLDTAATGAIGFTAPIAAATISLDPTLDLELRVTSMIIGILVGLASFAKLAYDIWDDHRKREK
Ga0214206_10034086	3300021131	Freshwater	MMHHIDTAATGAIGMTAPLAAAAISLDPMLDLELRVASMVIGILVGLASFAKLAYDLYADHKNRNK
Ga0236341_10028295	3300022591	Freshwater	MMHHLDTAATGAIGFTAPIAAAAISLDPMLDLELRVTSMIIGILVGLASFAKLAYDLYADHKNRNK
Ga0208615_10000215	3300025330	Freshwater	MTPHIDTAATGAIGFTAPIAAATISLDPTLDLELRVLSLIIGIFVGVASFAKLIYDIWADHKNRNRK
Ga0208615_1026352	3300025330	Freshwater	MHHIDTAATGAIGFTAPIAAAAISLDPTLDLELRVASMIIGILVGLASFAKLAYDLYADHKNRNK
Ga0208619_1038213	3300025336	Freshwater	MQHLNTAATGVIGFTTPLAAATLSLDPNLDLELRVASMVIGIVVGILSLIKLVCDFVSDRKEKQ
Ga0208252_10001615	3300025337	Freshwater	MVHHLDTAATGAIGFAAPIAAATLSLDATLDLEMRIASMAVGILVGLASFAKLCYDIWADHKNREK
Ga0208252_1009146	3300025337	Freshwater	MMHHFDTAATGAIGFTTPIVAATISLDPALDLELRVLSLIIGIFVGVASFAKLIYDIWADHKNRNRK
Ga0208502_100008716	3300025339	Freshwater	MTPHIDTAATGAIGFTAPIAAATISLDPALDLELRVLSLIIGIFVGIASFAKLVYDIWADHKNRNRK
Ga0208866_10000177	3300025340	Freshwater	MMHHFDTAATGAIGMTAPLAAAAISLDPMLDLELRLASMVIGILVGLASFAKLAYDLYADHKNRNK
Ga0208737_10001557	3300025346	Freshwater	MAPHIDTAATGAIGFTAPIAAATISLDPALDLELRVLSLIIGIFVGVASFAKLIYDIWADHKNRNRK
Ga0208737_10006526	3300025346	Freshwater	MVHHIDTAATGAIGFTAPIAAATLSLDPTLDLEMRIASMVIGILVGLASFAKLCYDIWSDHKNREK
Ga0208254_10006507	3300025355	Freshwater	MTPHIDTAATGAIGFTAPIAAATISLDPALDLELRVLSLIIGIFVGVASFAKLIYDIWADHKNRNRK
Ga0208870_100001219	3300025356	Freshwater	MMHHFDTAATGAIGFTAPVAAAAISLDPMLDLELRVASLIIGILVGIASFSKLIYDIWADHKARSKK
Ga0208621_10209952	3300025365	Freshwater	MIHHTDTIMTGFVGTTAPIAAATISLDPALDLELRVLSLLIGIFVGIASFAKLIYDIWADHRSRNK
Ga0208505_100002117	3300025366	Freshwater	MHHIDTAATGAIGMTAPIAAAAISFDPTLDLELRIISMAIGIFVGLASFAKLAYDLYADHKNRKK
Ga0207957_100009632	3300025372	Freshwater	MMHHFDTAATGAIGFTAPVAAAAISLDPMLDFELRLASLLIGILVGIISFAKLCYDLYADHKNRNK
Ga0207957_100076310	3300025372	Freshwater	MVHHLDTAVTGAVGCTAPIAAATLSLDPALDFEMRIASMMIGILVGLASFSKLCYDIWADHNKREK
Ga0208738_10028152	3300025379	Freshwater	MIHHTDTVLTGFIGTTAPLAAATISLDPALDLELRILSLVIGIFVGLASFAKLIYDIWADHKNRNK
Ga0208256_10063813	3300025382	Freshwater	MHHIDTAATGAIGFTAPIAAAAISLDPTLDLELRLASMVIGILVGLASFAKLAYDLYADHKNRNK
Ga0207956_10101655	3300025385	Freshwater	MTPHIDTAATGAIGFTAPIAAATISLDPALDLELRVLSLIIGIFVGIASFAKLVYDI
Ga0207959_10038917	3300025387	Freshwater	MVHHIDTAATGAIGFTAPIAAATLSLDPTLDLEMRIASMVIGILVGLASFAKLCYDIWADHKNREK
Ga0208257_10096214	3300025389	Freshwater	MHHFDTAATGAIGFTAPVAAAAISLDPMLDFELRLASLLIGILVGIISFAKLCYDLYADHKNRNK
Ga0208380_10127534	3300025392	Freshwater	MHHIDTAATGMIGFTTPIAAAAISLDPMLDLELRVASLVIGILVGIASFSKLIYDIWADHKARSKK
Ga0208107_10903082	3300025399	Freshwater	MIHHIDTAATGAIGFTAPIAAAAISLDPTLDLELRLASMVIGILVGLASFAKLAYDLYADHKNRNK
Ga0208381_10003431	3300025405	Freshwater	DTAATGAIGFTAPMAAAAISLDPMLDLELRVASMIIGILVGLASFAKLAYDLYADHKNRN
Ga0208875_10030638	3300025410	Freshwater	MHHIDTATTGAIGMTAPIAAAAISLDPTLDLELRIVSMIIGIFVGLASFAKLAYDLYADHKNRNK
Ga0208868_100002722	3300025415	Freshwater	MTGFVGTTAPIAAATISLDPALDLELRVLSLLIGIFVGIASFAKLIYDIWADHRSRNK
Ga0208616_10006897	3300025417	Freshwater	MMHHIDTAATGAIGFTAPVAAAAISLDPMLDFELRLASLLIGILVGIISFAKLCYDLYADHKNRNK
Ga0208616_10522833	3300025417	Freshwater	HHIDTAATGAIGFTAPIAAAAISLDPTLDLELRLASMVIGILVGLASFAKLAYDLYADHKNRNK
Ga0207958_100055010	3300025421	Freshwater	MTAPLAAATISLDPSLDLELRIVSMVIGIFVGIASFAKLIYDIWADHNDRNQK
Ga0207958_10060301	3300025421	Freshwater	HLDTAATGAIGFAAPIAAATLSLDATLDLEMRIASMAVGILVGLASFAKLCYDIWADHKNREK
Ga0207958_10267483	3300025421	Freshwater	ATGAIGFTAPIAAATISLDPTLDLELRVLSLIIGIFVGVASFAKLIYDIWADHKNRNRK
Ga0208617_10057786	3300025424	Freshwater	HIDTAATGAIGFTAPIAAAAISLDPTLDLELRLASMVIGILVGLASFAKLAYDLYADHKNRNK
Ga0208739_100045923	3300025426	Freshwater	MHHIDTAATGAIGFTAPMAAAAISLDPMLDLELRVASMIIGILVGLASFAKLAYDLYADHKNRNK
Ga0208379_10183546	3300025598	Freshwater	MTPHIDTAATGAIGFTAPIAAATISLDPTLDLELRVLSLIIGIFVGVASFAKLIYDIW
Ga0208379_10737753	3300025598	Freshwater	MVHHLDTAATGAIGFAAPIAAATLSLDATLDLEMRIASMAVGILVGLASFAKLCYDIWADHKNR
Ga0208388_10257983	3300025778	Freshwater	MAPHIDTATTGAIGFATPIAAATLSLDPSLDLELRVLSLLIGIFVGIASFAKLVYDIWADHKNRTRK
Ga0208386_10187674	3300025781	Freshwater	HHIDTAATGAIGMTAPLAAAAISLDPMLDLELRLASMVIGILVGLASFAKLAYDLYADHKNRNK
Ga0209085_100475515	3300027741	Freshwater Lake	MVHHVDTAATGAVGMTAPLAAATLSLDPTLDLELRIISMVIGIFVGLASFAKLVYDIWYDHKNKK
Ga0209085_10924714	3300027741	Freshwater Lake	MTPHIDTAATGMIGFTTPIAAAAISLDPMLDLELRVASLIIGILVGLASFSKLIYDIWADHKNRNK
Ga0209829_100284104	3300027777	Freshwater Lake	MHHIDTAATGAIGFTAPLAAAAISFDPTLDLELRVTSMLIGICVGLASLAKLVYDIYADHMARNKK
Ga0209500_102122062	3300027782	Freshwater Lake	MQHIDTAATGAIGMTAPLAAAAISLDPMLDLELRIISMCIGILVGLASLSKLVYDLWADHKSRNKK
Ga0209777_101044892	3300027896	Freshwater Lake Sediment	MHHIDTATTGAIGMTAPIAAAAISLDPTLDLELRIVSMIIGILVGLASFAKLAYDLYADHKNRNK
Ga0209777_102944735	3300027896	Freshwater Lake Sediment	MAPHIDTATTGAIGFTTPIVAATISLDPALDLELRVLSLIIGIFVGIASFAKLVYDIWAD
Ga0209777_103632644	3300027896	Freshwater Lake Sediment	TDTAITGAIGFTAPIAAATISLDPALDLELRIISMVIGIFVGLASFCKLIYDIWADHRNRNK
Ga0209777_105500372	3300027896	Freshwater Lake Sediment	MHHIDTATTGAIGMTAPIAAAAISLDPTLDLELRIISMIIGILVGLASFAKLVYDLYKDHQNRNK
Ga0209777_108065621	3300027896	Freshwater Lake Sediment	GFTAPIAAATISLDPALDLELRVLSLIIGIFVGIASFAKLVYDIWADHKNRNRK
Ga0316217_100232047	3300031813	Freshwater	MMHHLDTAATGAIGFTAPIAAATISLDPTLDLELRVTSMIIGILVGLASFAKLAYDIWDDHRKREK
Ga0316227_10006864	3300032677	Freshwater	MHHLDTAATGAIGFTAPIAAAAISLDPMLDLELRVASMIIGILVGLASFAKLAYDLYADHKNRNK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080806

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences