Metagenome / Metatranscriptome Family F080549

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F080549
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	134 residues
Representative Sequence	VAPKSKTAVQAGETEPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Number of Associated Samples	87
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.09 %
% of genes near scaffold ends (potentially truncated)	48.70 %
% of genes from short scaffolds (< 2000 bps)	82.61 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (56.522 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.652 % of family members)
Environment Ontology (ENVO)	Unclassified (20.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.826 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.35% β-sheet: 21.52% Coil/Unstructured: 60.13%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF03631	Virul_fac_BrkB	35.65
PF01557	FAA_hydrolase	9.57
PF08281	Sigma70_r4_2	4.35
PF13426	PAS_9	2.61
PF07730	HisKA_3	1.74
PF00072	Response_reg	0.87
PF06580	His_kinase	0.87
PF13618	Gluconate_2-dh3	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	35.65
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.74
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.74
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.74
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.74
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.87
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.52 %
Unclassified	root	N/A	43.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.52 %
Unclassified	root	N/A	43.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.52 %
Unclassified	root	N/A	43.48 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	53.91 %
Unclassified	root	N/A	43.48 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	53.91 %
Unclassified	root	N/A	43.48 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	53.91 %
Unclassified	root	N/A	43.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.48 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	19.13 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	2.61 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	2.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.48 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	19.13 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	2.61 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	2.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.48 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	19.13 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	2.61 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	2.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.48 %
Rhabdobacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Rhabdobacter	2.61 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	2.61 %
Segetibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Segetibacter	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.48 %
Rhabdobacter roseus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Rhabdobacter → Rhabdobacter roseus	2.61 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	2.61 %
Segetibacter koreensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Segetibacter → Segetibacter koreensis	0.87 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908043\|A2_c1_ConsensusfromContig17824	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	824	Open in IMG/M
3300000317\|WSSedL2TaDRAFT_1028400	Not Available	602	Open in IMG/M
3300000559\|F14TC_102815354	Not Available	548	Open in IMG/M
3300001213\|JGIcombinedJ13530_100570416	Not Available	1235	Open in IMG/M
3300001213\|JGIcombinedJ13530_102335567	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	946	Open in IMG/M
3300001664\|P5cmW16_1062524	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	630	Open in IMG/M
3300002090\|JGI24806J26614_1010906	Not Available	1355	Open in IMG/M
3300004092\|Ga0062389_100788912	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	1129	Open in IMG/M
3300004635\|Ga0062388_101260130	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	735	Open in IMG/M
3300005168\|Ga0066809_10176730	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	566	Open in IMG/M
3300005367\|Ga0070667_100424674	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	1212	Open in IMG/M
3300005439\|Ga0070711_101694523	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	554	Open in IMG/M
3300005526\|Ga0073909_10098718	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300005534\|Ga0070735_10951368	Not Available	503	Open in IMG/M
3300005538\|Ga0070731_10180381	Not Available	1402	Open in IMG/M
3300005610\|Ga0070763_10111319	Not Available	1392	Open in IMG/M
3300005646\|Ga0075040_1369653	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	525	Open in IMG/M
3300005944\|Ga0066788_10006056	Not Available	2459	Open in IMG/M
3300005944\|Ga0066788_10007989	All Organisms → cellular organisms → Bacteria	2186	Open in IMG/M
3300005944\|Ga0066788_10014976	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300005950\|Ga0066787_10046000	Not Available	828	Open in IMG/M
3300005952\|Ga0080026_10000187	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	14893	Open in IMG/M
3300005993\|Ga0080027_10001381	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	9864	Open in IMG/M
3300005993\|Ga0080027_10001737	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	8624	Open in IMG/M
3300006047\|Ga0075024_100202396	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	931	Open in IMG/M
3300006050\|Ga0075028_100157954	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1202	Open in IMG/M
3300006050\|Ga0075028_100953126	Not Available	531	Open in IMG/M
3300006057\|Ga0075026_100201491	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1047	Open in IMG/M
3300006059\|Ga0075017_100235038	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1336	Open in IMG/M
3300006086\|Ga0075019_10472958	Not Available	774	Open in IMG/M
3300006163\|Ga0070715_10455894	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	723	Open in IMG/M
3300006172\|Ga0075018_10233110	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Rhabdobacter → Rhabdobacter roseus	885	Open in IMG/M
3300006174\|Ga0075014_100844235	Not Available	544	Open in IMG/M
3300006176\|Ga0070765_100890765	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	841	Open in IMG/M
3300006354\|Ga0075021_10761573	Not Available	624	Open in IMG/M
3300009093\|Ga0105240_10727073	Not Available	1081	Open in IMG/M
3300010400\|Ga0134122_10025008	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4495	Open in IMG/M
3300012212\|Ga0150985_120159481	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Rhabdobacter → Rhabdobacter roseus	904	Open in IMG/M
3300012357\|Ga0137384_10766023	Not Available	782	Open in IMG/M
3300012924\|Ga0137413_10623374	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	810	Open in IMG/M
3300012924\|Ga0137413_11608972	Not Available	531	Open in IMG/M
3300013104\|Ga0157370_11509897	Not Available	604	Open in IMG/M
3300013105\|Ga0157369_10503895	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1252	Open in IMG/M
3300013296\|Ga0157374_10095900	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2837	Open in IMG/M
3300013306\|Ga0163162_10810313	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1053	Open in IMG/M
3300013503\|Ga0120127_10061971	Not Available	773	Open in IMG/M
3300013832\|Ga0120132_1058229	Not Available	759	Open in IMG/M
3300014322\|Ga0075355_1018800	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1379	Open in IMG/M
3300014968\|Ga0157379_10323173	Not Available	1409	Open in IMG/M
3300014968\|Ga0157379_11068460	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Rhabdobacter → Rhabdobacter roseus	772	Open in IMG/M
3300014969\|Ga0157376_10072106	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2937	Open in IMG/M
3300014969\|Ga0157376_10500229	Not Available	1194	Open in IMG/M
3300015242\|Ga0137412_10831495	Not Available	675	Open in IMG/M
3300018072\|Ga0184635_10371114	Not Available	546	Open in IMG/M
3300020021\|Ga0193726_1048360	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2038	Open in IMG/M
3300020021\|Ga0193726_1058910	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1812	Open in IMG/M
3300020062\|Ga0193724_1006150	Not Available	2576	Open in IMG/M
3300020579\|Ga0210407_10925044	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	668	Open in IMG/M
3300020581\|Ga0210399_10116396	Not Available	2194	Open in IMG/M
3300020581\|Ga0210399_10465834	Not Available	1052	Open in IMG/M
3300021180\|Ga0210396_10030313	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5002	Open in IMG/M
3300021403\|Ga0210397_10099754	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1959	Open in IMG/M
3300021403\|Ga0210397_10111673	Not Available	1862	Open in IMG/M
3300021403\|Ga0210397_11315656	Not Available	561	Open in IMG/M
3300021405\|Ga0210387_10073935	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2795	Open in IMG/M
3300021420\|Ga0210394_10286956	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1443	Open in IMG/M
3300021420\|Ga0210394_11677202	Not Available	533	Open in IMG/M
3300021432\|Ga0210384_10004467	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	15606	Open in IMG/M
3300021432\|Ga0210384_10289737	Not Available	1474	Open in IMG/M
3300021432\|Ga0210384_11705994	Not Available	535	Open in IMG/M
3300021445\|Ga0182009_10664416	Not Available	562	Open in IMG/M
3300021475\|Ga0210392_11436743	Not Available	516	Open in IMG/M
3300021478\|Ga0210402_10530378	Not Available	1093	Open in IMG/M
3300021478\|Ga0210402_10932167	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	795	Open in IMG/M
3300021479\|Ga0210410_11148204	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	668	Open in IMG/M
3300021855\|Ga0213854_1274208	Not Available	551	Open in IMG/M
3300025427\|Ga0208077_1006573	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1663	Open in IMG/M
3300025464\|Ga0208076_1024573	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1045	Open in IMG/M
3300025474\|Ga0208479_1011808	Not Available	1868	Open in IMG/M
3300025494\|Ga0207928_1048105	Not Available	812	Open in IMG/M
3300025505\|Ga0207929_1014534	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1488	Open in IMG/M
3300025527\|Ga0208714_1121014	Not Available	503	Open in IMG/M
3300025878\|Ga0209584_10000328	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	14272	Open in IMG/M
3300025913\|Ga0207695_10755613	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Segetibacter → Segetibacter koreensis	852	Open in IMG/M
3300025939\|Ga0207665_10382564	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1068	Open in IMG/M
3300025986\|Ga0207658_10381644	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1234	Open in IMG/M
3300026214\|Ga0209838_1000124	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	9132	Open in IMG/M
3300026214\|Ga0209838_1042003	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	665	Open in IMG/M
3300026215\|Ga0209849_1000917	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5416	Open in IMG/M
3300026215\|Ga0209849_1014569	Not Available	1301	Open in IMG/M
3300026281\|Ga0209863_10000148	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	43979	Open in IMG/M
3300026281\|Ga0209863_10009393	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3130	Open in IMG/M
3300026291\|Ga0209890_10023041	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2420	Open in IMG/M
3300027869\|Ga0209579_10507912	Not Available	654	Open in IMG/M
3300027894\|Ga0209068_10075225	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1750	Open in IMG/M
3300027894\|Ga0209068_10960910	Not Available	507	Open in IMG/M
3300027915\|Ga0209069_10157934	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1132	Open in IMG/M
3300029897\|Ga0247036_1024088	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1641	Open in IMG/M
3300030602\|Ga0210254_11404286	Not Available	526	Open in IMG/M
3300031057\|Ga0170834_102246303	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	854	Open in IMG/M
3300031057\|Ga0170834_108060566	Not Available	616	Open in IMG/M
3300031057\|Ga0170834_110689397	Not Available	556	Open in IMG/M
3300031122\|Ga0170822_14722687	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	684	Open in IMG/M
3300031122\|Ga0170822_16942590	Not Available	544	Open in IMG/M
3300031128\|Ga0170823_11325755	Not Available	681	Open in IMG/M
3300031128\|Ga0170823_13547206	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	581	Open in IMG/M
3300031231\|Ga0170824_107853925	Not Available	1139	Open in IMG/M
3300031231\|Ga0170824_112880974	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	813	Open in IMG/M
3300031446\|Ga0170820_11318469	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	726	Open in IMG/M
3300031446\|Ga0170820_14330329	Not Available	549	Open in IMG/M
3300031469\|Ga0170819_16349806	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	650	Open in IMG/M
3300031469\|Ga0170819_17542399	Not Available	584	Open in IMG/M
3300031474\|Ga0170818_108633689	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1155	Open in IMG/M
3300031474\|Ga0170818_112209221	Not Available	515	Open in IMG/M
3300033433\|Ga0326726_10196066	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1862	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.70%
Host-Associated	Host-Associated	11.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.30%
Aquatic	Environmental → Aquatic	17.39%
Plants	Host-Associated → Plants	11.30%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.43%
Sediment	Environmental → Aquatic → Sediment	11.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.57%
Freshwater	Environmental → Aquatic → Freshwater	3.48%
Marine	Environmental → Aquatic → Marine	2.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.74%
Peat	Environmental → Terrestrial → Peat	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.30%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.83%
Loam	Environmental → Terrestrial → Soil → Loam	5.22%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.74%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.87%
Ice	Environmental → Aquatic → Freshwater → Ice	0.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.04%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	13.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.30%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	9.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.83%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	2.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	13.04%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	10.43%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	7.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	6.09%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.48%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.48%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	3.48%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.61%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.61%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.74%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.74%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.87%
Cryconite	Environmental → Aquatic → Freshwater → Ice → Unclassified → Cryconite	0.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.87%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.87%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
3300000317	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site L2 Tule	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300002090	Soil microbial communities from Manhattan, Kansas, USA - Sample 200um MDA	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005646	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_057 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021855	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025494	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300029897	Cryconite microbial communities from ice sheet in Tasiilaq, Greenland - TAS_L-B2b	Environmental	Open in IMG/M
3300030602	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR018SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_c1_01073940	2124908043	Soil	IFTGNLNILPVAQKSKVAIQAKGSEPGAAKAAETKPPAKRKSAAKISVSKLFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRVPTEADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK
WSSedL2TaDRAFT_10284002	3300000317	Wetland	SRIPLNVQPVGHYGINGRLWLLRIRFSGVFTGFTFFAYIYMNLKFLPVAQKSKSKVAKAEAPRPEAIKSTDKNVPVKRKLSSRISVAKIFHEKEIPMAQIDKTNVDHHMAKKYLTKYLDRVPTEADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
F14TC_1028153541	3300000559	Soil	VAPKSKSISQAGESGPEPVKNKEIKLPVKRKSPAKISVSKIFHEKEIPMAQIERTNVDHHMAKKYLTKYLDRIPTEADIEKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKA
JGIcombinedJ13530_1005704162	3300001213	Wetland	VSKKSNEAVQSAETGPESVKPVKVKQPAKRKSPTKISSSSLFPEKEIPMAQIEKTNVDHHMAKKYLTQYLDRDPTPADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
JGIcombinedJ13530_1023355672	3300001213	Wetland	VAQKSKAALQGGETKPESVKAAEIKVPVKRKSPVKISISKIFPEKEIPMANIEKTNVDHHMAKKYLTKYLDRVPTEADIDKASIIKKSDSVSYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
P5cmW16_10625242	3300001664	Permafrost	NIFKVAQKSKSIQAAETIPEPLKTAEAKLPVKRKSATKISISKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRVPTDADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
JGI24806J26614_10109061	3300002090	Soil	AKATIKVPAKRKTSTKISTSKIFAEKEIPMAQIDKTNVDHHMAKKYLTQYLDRIPTQTDIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0062389_1007889122	3300004092	Bog Forest Soil	MVDGVARHWPIAVGRLTNIPKFNDRRILTANSQPRAASGHQLFYYPYIYPEPKHLIMARKSKTTDPAAGAVQAPTVKAEKKVPVKRKAADKISVSKIFTEKEIPMGQIEKTNVDHHMAKKYLTQYLDRVPTDADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
Ga0062388_1012601301	3300004635	Bog Forest Soil	SGHQLFYYPYIYPEPKHLIMARKSKTTDPAAGAVQAPTVKAEKKVPVKRKAADKISVSKIFTEKEIPMGQIEKTNVDHHMAKKYLTQYLDRVPTDADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
Ga0066809_101767301	3300005168	Soil	TGESDPEAVKPIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTPADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0070667_1004246742	3300005367	Switchgrass Rhizosphere	MPIFTGNINQLTVATKSKAAVQEGESAPEPLKSAEAKLPVKRKTAGKISVSKIFHEKEIPMAQIERTNVDHHMAKKYLTQYLDRDPTPADIDKATIIKKSDSISYLKYGGKMLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0070711_1016945231	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	KSKTADQTGETGPEAVKTIAAKPPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0073909_100987182	3300005526	Surface Soil	VPKKSKEAVLPAENAPVSPKPAKVKQPAKRKTAAKISSASLFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTPADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
Ga0070735_109513681	3300005534	Surface Soil	RPCFFNAYIYLNHKHSTVAPKSKTTVPTGETDPEAVKPIAAKLPAKRKTPAKISVSKIFPEKEIPMAQIERTNVDHHMAKKYLTKYLDRELTPADIEKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKTGKGIGVKMEFKPK*
Ga0070731_101803812	3300005538	Surface Soil	MAQKSKASVQTTDDKVTPAANAEPKVPAKRKTTAKISVSKIFPEKEIPMGQIEKTNVDHHMAKKYLTKYLDRIPTEADIEKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKSGKGIGVKMEFKPK*
Ga0070763_101113191	3300005610	Soil	MRIFTWNLNILTVAQKSKAAVQAGESNPGQAKEAEPKVPAKRKTSSRISVSKIFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRIPTQADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGI
Ga0075040_13696531	3300005646	Permafrost Soil	PKSKTPVQAAEPEPQIKAVKPKVPAKRKSPAKISVSKLFPEKEIPMAQIERTNVDHHMAKKYLTQYLDRIPTDADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
Ga0066788_100060562	3300005944	Soil	VAPKSKTAIPATETEPEAVKATAVKVPAKRKTSTKISVSKIFPEKEIPMAQIERTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0066788_100079894	3300005944	Soil	VAPKSKAAVQAGETEPEAVKAKEAKVPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTEADIDKTTIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
Ga0066788_100149762	3300005944	Soil	MKWHVITLRAFTKNAYIYPKPKHLTVAPKSKTPVQAAEPEPQIKAVKPKVPAKRKSPAKISVSKLFPEKEIPMAQIERTNVDHHMAKKYLTQYLDRIPTDADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
Ga0066787_100460001	3300005950	Soil	ATEVKVPGKRKSSAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRIPTEADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
Ga0080026_100001878	3300005952	Permafrost Soil	VAPKSKAAVQAVEAGPEAVKATEVKVPGKRKSSAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRIPTEADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
Ga0080027_100013814	3300005993	Prmafrost Soil	VAQKAKAAVKSAAASVTESKKEMEVKQEVSKPAVKRKTVPKISVSKLFPEKEIPMAQIEKTNVDHHMAKKYLTQYLERDLTPADIEKATIIKKSDSISYLKFGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0080027_100017379	3300005993	Prmafrost Soil	VAPKSKTAVQAAVTEQESAKPETKVPAKRKSPAKISVSKIFHEKEIPMAQIEKTNVDHHMAKKYLTKYLDRIPTPADIDKATIIKKSDSISYLKYGGKLLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
Ga0075024_1002023961	3300006047	Watersheds	TKAITAKVEETTPVAEKQVVKKVPVKRKSPAKISVSKLFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRIPTQADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
Ga0075028_1001579543	3300006050	Watersheds	VAPKSKTAAQPGETEPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDREPTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0075028_1009531261	3300006050	Watersheds	PGGGMLFTHEWAPKDPCGRRLYFAYIYRNLNFFPVSPKTKAITAKVEETTPVAEKQVVKKVPVKRKSPAKISVSKLFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRIPTQADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
Ga0075026_1002014912	3300006057	Watersheds	FTHEWAPKDPCGRRLYFAYIYRNLNFFPVSPKTKAITAKVEETTPVAEKQVVKKVPVKRKSPAKISVSKLFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRIPTQADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
Ga0075017_1002350382	3300006059	Watersheds	MSNLSQNERKTRIAFIMLIFTWNINQLPVAPKSKAVAQAAETAPESAKPASVKRPAKRRSPAKISSSSLFPEKEIPMAQIEKTNVDHHMAKKYLTQYLDRVPTPADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0075019_104729581	3300006086	Watersheds	PKRAAKRRSPIKINAPSLFPEREIPMAQIEKTNVDHHMAKKYLTQYLDRELTPADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0070715_104558942	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	SKRGLSRPCFFNAYIYLNHKHCTVAPKSKTTVPAGETDPEAVKPIAAKLPAKRKTPAKISVSKIFPEKEIPMAQIERTNVDHHMAKKYLTKYLDRELTPADIEKATIIRKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0075018_102331101	3300006172	Watersheds	GLSRPCFYYAYIYLNHKHFTVAPKSKTAAQPGETEPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDREPTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0075014_1008442351	3300006174	Watersheds	PKVPAKRKSPARKSASKIFPKKEIPMGQIEKTNVDHHMAKKYLTQYLDRIPTQADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
Ga0070765_1008907652	3300006176	Soil	MRIFTWNLNILTVAQKSKAAVQAGESNPGQAKEAEPKVPAKRKTSSRISVSKIFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRIPTQADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
Ga0075021_107615731	3300006354	Watersheds	MLIFTWNINQLPVAPKSKTVAQAGETGAESAKPASVKRPAKRRSPAKISSSSLFPEKEIPMAQIEKTNVDHHMAKKYLTQYLDRIPTPADIDKATIIKKSDSISYLKYGGKFLGTMTK
Ga0105240_107270731	3300009093	Corn Rhizosphere	HCTVAPKSKTTVPTVETDPEAVKPIAAKLPAKRKTPAKISVSKIFPEKEIPMAQIERTNVDHHMAKKYLTKYLDRELTPADIEKATIIRKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0134122_100250082	3300010400	Terrestrial Soil	VAPKSKSTPQAVETSPEQVKSKDVKVPVKRKSPTKISVSKIFHEKEIPMAQIEKTNVDHHMAKKYLTTYLDRIPTDADIEKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0150985_1201594811	3300012212	Avena Fatua Rhizosphere	PKSKTVLPDGETEPETVKPVVAKSPAKRKSPAKASLSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTPADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0137384_107660232	3300012357	Vadose Zone Soil	VAPKSKTAVQTGESDQEAVKPIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0137413_106233741	3300012924	Vadose Zone Soil	FTVAPKSKTAVQAGEPEPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0137413_116089721	3300012924	Vadose Zone Soil	VAPKSKTAIPATETEPEAVKAKAVKVPAKRKTSAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKFGGKFLGTMTKTIY
Ga0157370_115098971	3300013104	Corn Rhizosphere	VAPKSKTTVPAGETDPEAVKPIAAKLPAKRKTPAKISVSKIFPEKEIPMAQIERTNVDHHMAKKYLTKYLDRELTPADIEKATIIRKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0157369_105038953	3300013105	Corn Rhizosphere	VAPKSKTTVPTVETDPEAVKPIAAKLPAKRKTPAKISVSKIFPEKEIPMAQIERTNVDHHMAKKYLTKYLDRELTPADIEKATIIRKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0157374_100959001	3300013296	Miscanthus Rhizosphere	VAQKSKTADQTGETGPEAVKTIAAKPPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0163162_108103132	3300013306	Switchgrass Rhizosphere	MPIFTGNINQLTVATKSKAAVQEGESAPEPLKSAEAKLPVKRKTAGKISVSKIFHEKEIPMAQIERTNVDHHMAKKYLTQYLDRDPTPADIDKATIIKKSDSISYLKYGGKMLGTMTKTIYQTAEQKKAG
Ga0120127_100619713	3300013503	Permafrost	VAQKSKSIQAAETIPEPLKTAEAKLPVKRKSATKISISKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRVPTDADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVK
Ga0120132_10582292	3300013832	Permafrost	VAQKSKSIQAAETIPEPLKTAEAKLPVKRKSATKISISKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRVPTDADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
Ga0075355_10188001	3300014322	Natural And Restored Wetlands	RPEPVKAAETKVPAKRKSATKISVSKIFHEKEIPMAQIEKTNVDHHMAKKYLTKYLDRVPTDADIEKASIIKKSDSVSYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0157379_103231731	3300014968	Switchgrass Rhizosphere	KVKHPVKRKTAAKISSASLFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTPADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK*
Ga0157379_110684602	3300014968	Switchgrass Rhizosphere	VAPKSKTADQTGETGPEAVKTTAAKPPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0157376_100721062	3300014969	Miscanthus Rhizosphere	MLTMAQKSKAAGQVGEKEPEPAKEPIKVPVKRKASTKISISKIFPEKEIPMAQIAKTNVDHHMAKKYLTQYLDRVPTETDIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0157376_105002291	3300014969	Miscanthus Rhizosphere	VAPKSKSTPQAVETSPEPVKSKDVKVPVKRKSPAKISVSKIFHEKEIPMAQIEKTNVDHHMAKKYLTKYLDRIPTDADIEKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0137412_108314952	3300015242	Vadose Zone Soil	VAPKSKTAIPATETEPEAVKAKAVKVPAKRKTSAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKFGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK*
Ga0184635_103711142	3300018072	Groundwater Sediment	SEAFSGFAFFLPIFTWNLNTLTMAQKSKAAVQAGETEPDPAKGTTKVPVKRKSSTKISTSKIFAEKEIPMSQIDKTNVDHHMAKKYLTKYLDRIPTETDIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0193726_10483602	3300020021	Soil	VAPKSKTAIPATETEPEAVKATAVKVPAKRKTSTKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKFGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0193726_10589102	3300020021	Soil	VAPKSKAAVQAVEAGPEAVKATEVKVPAKRKSSAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRIPTDADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK
Ga0193724_10061505	3300020062	Soil	KHFTVAPKSKTAVQAGETEPEAVKSIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0210407_109250441	3300020579	Soil	PFCDCESKTLNCLLSGLSRPCFYYAYIYLNHKHFTVAPKSKTALQAVETEPEAIKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0210399_101163962	3300020581	Soil	LLSGLSRPCFYYAYIYLNHKHFTVAPKSKTALQSVETEPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0210399_104658341	3300020581	Soil	QKSKAAIQAGESKPVSAKQAEPKVPAKRKSPARISVSKIFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRIPTQADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK
Ga0210396_100303132	3300021180	Soil	MAQKSKASVQAPDDKLTPVANAEPKVPAKKKATAKISVSKIFPEKEIPMGQIEKTNVDHHMAKKYLTKYLDRIPTEADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKSGKGIGVKMEFKPK
Ga0210397_100997542	3300021403	Soil	VAQKSKAAVKVAEKEPETVKPTETKMPVKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTTYLDRIPTDADIDKATIIKKSDSISYLKYSGKFLGTMTKTIYQTPEQKKSGKGIGVKMEFKPK
Ga0210397_101116732	3300021403	Soil	VETEPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0210397_113156561	3300021403	Soil	RPCFYYAYIYLNHKHFTVAPKSKAAVPDGETEPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0210387_100739354	3300021405	Soil	VAQKLKAGIQAGESKPGSAKEAEPKVPVKRKSPARISVSKIFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRIPTEADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKSGKGIGVKMEFKPK
Ga0210394_102869562	3300021420	Soil	VAPKSKTALQAVETEPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0210394_116772021	3300021420	Soil	VAQKSKAAIQAGESMPVSAKQAEPKVPAKRKSPARISVSKIFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRIPTQADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK
Ga0210384_100044679	3300021432	Soil	MRIFTWNLNILTVAQKSKAAVQAGESNPGQAKEAEPKVPAKRKTSSRISVSKIFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRIPTQADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK
Ga0210384_102897371	3300021432	Soil	LSGLSRPCFYYAYIYLNHKHFTVAPKSKTALQAVETEPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0210384_117059941	3300021432	Soil	VAQKSKAGTQAGESKPGLTKEVEPKVPVKRKSPARISVSKIFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRIPTQADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKSGKGIGVKMEFKPK
Ga0182009_106644161	3300021445	Soil	HKHCTVAPKSKTTVPTVETDPEAVKPIAAKLPAKRKTPAKISVSKIFPEKEIPMAQIERTNVDHHMAKKYLTKYLDRELTPADIEKATIIRKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0210392_114367431	3300021475	Soil	YLNHKHFTVAPKSKTAIQAGETQPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0210402_105303781	3300021478	Soil	SDKLHGHPFCDCESKTLNCLLSGLSRPCFYYAYIYLNHKHFTVAPKSKTALQAVETEPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0210402_109321672	3300021478	Soil	VAQKSKAAIQAGESKPVSAKQAEPKVPAKRKSPARISVSKIFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRIPTQADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK
Ga0210410_111482041	3300021479	Soil	LNCLLSGLSRPCFYYAYIYLNHKHFTVAPKSKTALQAVETEPESVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0213854_12742081	3300021855	Watersheds	ALEPVKPVAPKRPAKRRSPTKIDAPSLFPEREIPMAQIEKTNVDHHMAKKYLTQYLDRIPTPADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0208077_10065733	3300025427	Arctic Peat Soil	VPQKTKAVARKDEPVPEPTKPAKVKLPAKRKSPAKISSTSLFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRIPTPADIDKATIIKKSDSISYLKFGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0208076_10245732	3300025464	Arctic Peat Soil	VAQKSKAAAPVVETKPEPTKKEPKVPVKRKSPAKISVSKIFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRTPTDADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK
Ga0208479_10118081	3300025474	Arctic Peat Soil	GACLLKLIFTGNLKLNTVPQKTKAVARKDEPVPEPTKPAKVKLPAKRKSPAKISSTSLFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRIPTPADIDKATIIKKSDSISYLKFGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0207928_10481051	3300025494	Arctic Peat Soil	MLIFTLNLNIXTVAQKSKAAAPVVETKPEPTKKEPKVPVKRKSPAKISVSKIFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRTPTDADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK
Ga0207929_10145342	3300025505	Arctic Peat Soil	VAQKPKAAVQTVETEPVSSKRALSKVSVKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTQYLDRIPTEADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK
Ga0208714_11210142	3300025527	Arctic Peat Soil	TGNLKLNTVPQKTKAVARKDEPVPEPTKPAKVKLPAKRKSPAKISSTSLFPEKEIPMAQIEKTNVDHHMAKKYLTQYLERIPTEADIEKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK
Ga0209584_100003289	3300025878	Arctic Peat Soil	MAEPVPEPKKPVTEKKPVKRKSPAKISSTSLFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRIPTPADIDKATIIKKSDSISYLKFGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0207695_107556132	3300025913	Corn Rhizosphere	VAPKSKTTVPTVETDPEAVKPIAAKLPAKRKTPAKISVSKIFPEKEIPMAQIERTNVDHHMAKKYLTKYLDRELTPADIEKATIIRKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0207665_103825641	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VAPKSKTTVPAGETDPEAVKPIAAKLPAKRKTPAKISVSKIFPEKEIPMAQIERTNVDHHMAKKYLTKYLDRELTPADIEKATIIRKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0207658_103816442	3300025986	Switchgrass Rhizosphere	MPIFTGNINQLTVATKSKAAVQEGESAPEPLKSAEAKLPVKRKTAGKISVSKIFHEKEIPMAQIERTNVDHHMAKKYLTQYLDRDPTPADIDKATIIKKSDSISYLKYGGKMLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0209838_100012411	3300026214	Soil	MKWHVITLRAFTKNAYIYPKPKHLTVAPKSKTPVQAAEPEPQIKAVKPKVPAKRKSPAKISVSKLFPEKEIPMAQIERTNVDHHMAKKYLTQYLDRIPTDADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK
Ga0209838_10420032	3300026214	Soil	AVKATEVKVPGKRKSSAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRIPTEADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK
Ga0209849_10009174	3300026215	Soil	VAPKSKTAIPATETEPEAVKATAVKVPAKRKTSTKISVSKIFPEKEIPMAQIERTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0209849_10145692	3300026215	Soil	VAPKSKAAVQAGETEPEAVKAKEAKVPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTEADIDKTTIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK
Ga0209863_1000014831	3300026281	Prmafrost Soil	VAPKSKTAVQAAVTEQESAKPETKVPAKRKSPAKISVSKIFHEKEIPMAQIEKTNVDHHMAKKYLTKYLDRIPTPADIDKATIIKKSDSISYLKYGGKLLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK
Ga0209863_100093933	3300026281	Prmafrost Soil	VAQKAKAAVKSAAASVTESKKEMEVKQEVSKPAVKRKTVPKISVSKLFPEKEIPMAQIEKTNVDHHMAKKYLTQYLERDLTPADIEKATIIKKSDSISYLKFGGKFLGTMTKTIYQTAE
Ga0209890_100230412	3300026291	Soil	VVEPVPEPKKPAREKLPAKRKSPAKISSSSIFPEKEIPMAQIQTTNVDHHMAKKYLTQYLNRIPTPADIDKATIIKKSDSISYLKFGGKFLGTMTKTIYQTAEQKKSGKGIGVKMEFKPK
Ga0209579_105079121	3300027869	Surface Soil	MAQKSKASVQTTDDKVTPAANAEPKVPAKRKTTAKISVSKIFPEKEIPMGQIEKTNVDHHMAKKYLTKYLDRIPTEADIEKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKSGKGIGVKMEFKPK
Ga0209068_100752252	3300027894	Watersheds	VAPKSKTAAQPGETEPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDREPTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0209068_109609101	3300027894	Watersheds	MLIFTWNINQLPVAPKSKTVAQAGETGAESAKPASVKRPAKRRSPAKISSSSLFPEKEIPMAQIEKTNVDHHMAKKYLTQYLDRIPTPADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKM
Ga0209069_101579342	3300027915	Watersheds	KTKAITAKVEETTPVAEKQVVKKVPVKRKSPAKISVSKLFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRIPTQADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK
Ga0247036_10240882	3300029897	Cryconite	VVQKAKTTTKKAVASSVEESKEVETKPVPAKPAVKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTQYLDRDPTPADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK
Ga0210254_114042861	3300030602	Soil	SAKQAEPKVPAKRKSPARISVSKIFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRIPTQADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKAGKGIGVKMEFKPK
Ga0170834_1022463032	3300031057	Forest Soil	KLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0170834_1080605662	3300031057	Forest Soil	MAQKSKAPVQATNDKLTPAVKAEPKVPAKRKTTAKISVSKIFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRVPTEADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKSGKGIGVKMEFKPK
Ga0170834_1106893971	3300031057	Forest Soil	MPIFTVNLNQLTLATKSKAAVQEGESAPEPVKSSEAKLPVKRKAASKISVSKIFHEKEIPMAQIERTNVDHHMAKKYLTQYLDRDPTPADIDKATIIKKSDSISYLKYGGKMLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0170822_147226871	3300031122	Forest Soil	WPCFYYAYIYLNHKHFTVAPKSKTAVQAGETQPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0170822_169425901	3300031122	Forest Soil	PFYYPYIYPEPKHITMAQKSKAPVQATNDKLTPAVKAEPKVPAKRKTTAKISVSKIFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRVPTEADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKSGKGIGVKMEFKPK
Ga0170823_113257552	3300031128	Forest Soil	VAPKSKTVVQAGETEPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0170823_135472062	3300031128	Forest Soil	QKSKAAARKDEPAPEAKKPPVVKQPVKRKSSTKLSVSSLFPEKEIPMAQIEKTNVDHHMAKKYLTQYLDRIPTQADIDKATIIKKSDSISYLKYGGKLLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0170824_1078539252	3300031231	Forest Soil	MDHLRSKVNHQRLGLIPEQSTIPFYYPYIYPEPKHITMAQKSKAPVQATNDKLTPAVKAEPKVPAKRKTTAKISVSKIFPEKEIPMGQIEKTNVDHHMAKKYLTQYLDRVPTEADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTPEQKKSGKGIGVKMEFKPK
Ga0170824_1128809741	3300031231	Forest Soil	VAPKSKTAVQAGETEPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0170820_113184691	3300031446	Forest Soil	KTLSFWLPSLSRPCFYYAYIYLNHKHFTVAPKSKTAVQAGETQPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0170820_143303291	3300031446	Forest Soil	WLPSLSRPCFYYAYIYLNHKHFTVAPKSKTAVQAGETLPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0170819_163498061	3300031469	Forest Soil	VAPKSKTAVQAGETQPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKREFKPK
Ga0170819_175423991	3300031469	Forest Soil	PKSKTVVQAGETEPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKKPVKAL
Ga0170818_1086336892	3300031474	Forest Soil	VAPKSKTAVQAGETQPEAVKTIAAKLPAKRKSPAKISVSKIFPEKEIPMAQIEKTNVDHHMAKKYLTKYLDRELTAADIDKATIIKKSDSISYLKYGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0170818_1122092212	3300031474	Forest Soil	RESKSVNLATKSKAAVQKGESAPEPVKSSEAKLPVKRKSAAKISVSKIFHEKEIPMAQIERTNVDHHMAKKYLTQYLDRDPTPADIDKATIIKKSDSISYLKYGGKMLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK
Ga0326726_101960662	3300033433	Peat Soil	LAQKSKTAGQAGETGPESTKPPGAKIPVKRKSAAKINSSKIFHEKEIPMAQIEKTNVDHHMAKKYLTKYLDRVPTDADIDKATIIKKSDSISYLKFGGKFLGTMTKTIYQTAEQKKAGKGIGVKMEFKPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080549

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences