Metagenome / Metatranscriptome Family F080416

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080416
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	85 residues
Representative Sequence	KTISTLRTSVGEFVFRQTPLGCYLELVVGNARWALGLFGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEQTP
Number of Associated Samples	106
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	65.22 %
% of genes from short scaffolds (< 2000 bps)	86.96 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.652 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.696 % of family members)
Environment Ontology (ENVO)	Unclassified (46.957 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.043 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.93% β-sheet: 26.13% Coil/Unstructured: 45.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00487	FA_desaturase	41.74
PF00152	tRNA-synt_2	2.61
PF02566	OsmC	2.61
PF03379	CcmB	0.87
PF01336	tRNA_anti-codon	0.87
PF00856	SET	0.87
PF12412	DUF3667	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	41.74
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	41.74
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	2.61
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	2.61
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	2.61
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	2.61
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	2.61
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	2.61
COG2386	ABC-type transport system involved in cytochrome c biogenesis, permease component	Posttranslational modification, protein turnover, chaperones [O]	0.87

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.65 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.65 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.65 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	92.17 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	92.17 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	84.35 %
Unclassified	root	N/A	4.35 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	3.48 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	84.35 %
Unclassified	root	N/A	4.35 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	3.48 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	84.35 %
Unclassified	root	N/A	4.35 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	3.48 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	84.35 %
Unclassified	root	N/A	4.35 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	3.48 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	84.35 %
Unclassified	root	N/A	4.35 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3.48 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|FZY7DQ102IC3J8	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
2170459003\|FZ032L002HKJI3	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
2170459006\|GBPF9FW01A7U1N	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
2189573004\|GZGWRS401EN41M	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
2189573004\|GZGWRS402IKY98	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300000956\|JGI10216J12902_109724532	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300005178\|Ga0066688_10408929	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	880	Open in IMG/M
3300005186\|Ga0066676_10143406	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1495	Open in IMG/M
3300005293\|Ga0065715_10026153	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1211	Open in IMG/M
3300005293\|Ga0065715_10069761	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300005294\|Ga0065705_10640503	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	683	Open in IMG/M
3300005328\|Ga0070676_10362149	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1000	Open in IMG/M
3300005328\|Ga0070676_11436697	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300005347\|Ga0070668_101474041	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	622	Open in IMG/M
3300005438\|Ga0070701_10049131	All Organisms → cellular organisms → Bacteria	2180	Open in IMG/M
3300005439\|Ga0070711_101940308	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300005467\|Ga0070706_101674438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300005507\|Ga0074259_10998585	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	958	Open in IMG/M
3300005549\|Ga0070704_100552116	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1007	Open in IMG/M
3300005555\|Ga0066692_10591266	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	698	Open in IMG/M
3300005564\|Ga0070664_101980981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300006173\|Ga0070716_100280575	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1149	Open in IMG/M
3300006871\|Ga0075434_100256198	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1768	Open in IMG/M
3300007076\|Ga0075435_102000692	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300009090\|Ga0099827_10944063	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	748	Open in IMG/M
3300009101\|Ga0105247_11624808	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300009553\|Ga0105249_11205380	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	828	Open in IMG/M
3300010159\|Ga0099796_10053883	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1404	Open in IMG/M
3300010323\|Ga0134086_10031274	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300010371\|Ga0134125_11377337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	769	Open in IMG/M
3300010373\|Ga0134128_13008141	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300010400\|Ga0134122_11493955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	694	Open in IMG/M
3300010403\|Ga0134123_10123939	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2097	Open in IMG/M
3300010999\|Ga0138505_100029433	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	742	Open in IMG/M
3300012198\|Ga0137364_10043665	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2950	Open in IMG/M
3300012200\|Ga0137382_10388491	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	982	Open in IMG/M
3300012202\|Ga0137363_11353495	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300012207\|Ga0137381_11414284	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300012208\|Ga0137376_11248380	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300012211\|Ga0137377_10882684	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	826	Open in IMG/M
3300012350\|Ga0137372_10300367	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1245	Open in IMG/M
3300012354\|Ga0137366_10360300	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1063	Open in IMG/M
3300012362\|Ga0137361_11065350	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	729	Open in IMG/M
3300012363\|Ga0137390_10773391	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	919	Open in IMG/M
3300012489\|Ga0157349_1002304	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1145	Open in IMG/M
3300012582\|Ga0137358_10152226	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1575	Open in IMG/M
3300012683\|Ga0137398_10848939	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300012904\|Ga0157282_10022920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1309	Open in IMG/M
3300012907\|Ga0157283_10063757	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	888	Open in IMG/M
3300012917\|Ga0137395_10236419	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1280	Open in IMG/M
3300012922\|Ga0137394_10196755	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1721	Open in IMG/M
3300012923\|Ga0137359_10633048	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	936	Open in IMG/M
3300012924\|Ga0137413_10956887	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	669	Open in IMG/M
3300012924\|Ga0137413_11391101	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300012929\|Ga0137404_11224629	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	691	Open in IMG/M
3300012930\|Ga0137407_11062854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	767	Open in IMG/M
3300012944\|Ga0137410_10537986	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	959	Open in IMG/M
3300012951\|Ga0164300_10165096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1052	Open in IMG/M
3300012951\|Ga0164300_10973391	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300012975\|Ga0134110_10046679	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1706	Open in IMG/M
3300012985\|Ga0164308_12051657	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300012988\|Ga0164306_11865201	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300012989\|Ga0164305_11617322	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300014968\|Ga0157379_12370696	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300014969\|Ga0157376_10570640	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1122	Open in IMG/M
3300015053\|Ga0137405_1084728	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1678	Open in IMG/M
3300015242\|Ga0137412_10013995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6491	Open in IMG/M
3300015245\|Ga0137409_10016804	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	7269	Open in IMG/M
3300015372\|Ga0132256_103924537	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300017659\|Ga0134083_10059405	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1454	Open in IMG/M
3300018000\|Ga0184604_10346651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300018061\|Ga0184619_10155750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1043	Open in IMG/M
3300018468\|Ga0066662_10582091	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1043	Open in IMG/M
3300019356\|Ga0173481_10503025	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300019789\|Ga0137408_1125432	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1682	Open in IMG/M
3300019789\|Ga0137408_1151438	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300019789\|Ga0137408_1312112	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	7418	Open in IMG/M
3300019870\|Ga0193746_1017287	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	746	Open in IMG/M
3300019877\|Ga0193722_1011373	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2269	Open in IMG/M
3300019883\|Ga0193725_1083588	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	773	Open in IMG/M
3300019886\|Ga0193727_1012613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3203	Open in IMG/M
3300020008\|Ga0193757_1021443	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300020170\|Ga0179594_10009982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2611	Open in IMG/M
3300021080\|Ga0210382_10296271	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	711	Open in IMG/M
3300021363\|Ga0193699_10182105	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	870	Open in IMG/M
3300021413\|Ga0193750_1077591	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300022756\|Ga0222622_10155671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1478	Open in IMG/M
3300025271\|Ga0207666_1004374	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1772	Open in IMG/M
3300025905\|Ga0207685_10671869	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300025910\|Ga0207684_10437651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1123	Open in IMG/M
3300025945\|Ga0207679_11377687	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300025945\|Ga0207679_12043739	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300026095\|Ga0207676_10489388	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1166	Open in IMG/M
3300026329\|Ga0209375_1219620	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	685	Open in IMG/M
3300026792\|Ga0207499_101075	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	812	Open in IMG/M
3300026933\|Ga0207578_1017277	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300027433\|Ga0207618_101536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300027461\|Ga0207601_101876	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300027903\|Ga0209488_10019093	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4976	Open in IMG/M
3300028811\|Ga0307292_10427734	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300030848\|Ga0075388_11401881	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300031128\|Ga0170823_10284831	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
3300031226\|Ga0307497_10391387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300031231\|Ga0170824_107999590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	673	Open in IMG/M
3300031943\|Ga0310885_10173032	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1049	Open in IMG/M
3300031962\|Ga0307479_11459614	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	642	Open in IMG/M
3300032000\|Ga0310903_10091018	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1278	Open in IMG/M
3300032075\|Ga0310890_11579769	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300032174\|Ga0307470_10930798	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	685	Open in IMG/M
3300032180\|Ga0307471_103040261	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	595	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.35%
Host-Associated	Host-Associated	15.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.87%
Plants	Host-Associated → Plants	15.65%
Aquatic	Environmental → Aquatic	3.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.48%
Sediment	Environmental → Aquatic → Sediment	2.61%
Freshwater	Environmental → Aquatic → Freshwater	0.87%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.91%
Loam	Environmental → Terrestrial → Soil → Loam	6.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.61%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.87%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	53.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.35%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.61%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.74%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.87%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.87%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005507	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019870	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020008	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026792	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3-12 (SPAdes)	Environmental	Open in IMG/M
3300026933	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10K4-12 (SPAdes)	Environmental	Open in IMG/M
3300027433	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A3w-11 (SPAdes)	Environmental	Open in IMG/M
3300027461	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE15-E (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_07413830	2170459002	Grass Soil	MSTLRTSVGEFVFRQTPLGCHLELVVGNVRWALGLYGTNEAAVRAMKNGRTGFRTWDALDRRTAGNQIGTLSRWNKGEQTA
E4A_00090450	2170459003	Grass Soil	MSTLRTSVGEFVFRQTPLGCHLELAVGNARWPLGLYGTNEAAVRALKNGRTGFRTWDALDRRTAANQIGTLSRWNKGEQTA
L01_04217250	2170459006	Grass Soil	QHHHRQIATPNKTMSTLRTSVGEFVFRQTPLGCHLELAVGNARWPLGLYGTNEAAVRALKNGRTGFRTWDALDRRTAANQIGTLSRWNKGEQTA
FG2_05253670	2189573004	Grass Soil	LRTSVGEFVFRQTPLGCHLELVVGNARWALGLYGTNEAAVLALKNGRTGFRTWDALDRRTAGDQIGTLSRWNKGEQTA
FG2_08237520	2189573004	Grass Soil	EFVFHQTPLGCHLELVVGNARWALGLYGTNEAAVRALKNGRTGFRTWDALDRRTAGNQIGTLSRWNKGEQTA
JGI10216J12902_1097245321	3300000956	Soil	GEFVFRQTPLGCHLELSVGNVRWTLGLYGTNEAALRALKNGRTGFRTWDALGRKTAAYQVGTLSRWNKCEQRRE*
Ga0066688_104089292	3300005178	Soil	SVGEFVFRQTPLGCYLELVVGSACWALGLYGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKAEQTP*
Ga0066676_101434061	3300005186	Soil	IASPNKTISTLRTSVGEFVFRQTSLGCYLELVVGNARWALGLFGTNEAAVRALKNGRTGFRTWDALGGKTAANQIGTLNRWNKGEQTP*
Ga0065715_100261531	3300005293	Miscanthus Rhizosphere	ANKTISTLRTSVGEFVFRQTPLGCYLDLVVGNVRWALGLFGTNDAAVRALKNGRTGFPTWDALRRKTAANQIGTLSRWNKVEQTL*
Ga0065715_100697612	3300005293	Miscanthus Rhizosphere	ASPNKTISTLRTSVGEFVFRQTPLGCHLDLVVGNVRWALGLYGTNEAALRALKNGRTGFRTWDALGHKTAANQIGTLSRWNKGEQTP*
Ga0065705_106405032	3300005294	Switchgrass Rhizosphere	MSTLRTSVGEFVFRQTPLGCHLELVVGNARWALGLYGTNEAAVRALKNGRTGFGTWDALDCRTAANQIGTLSRWNKGEQTA*
Ga0070676_103621491	3300005328	Miscanthus Rhizosphere	TISTLRTSVGEFVFRQTPLGCHLELVVGDARRALGLYGTNEAAVRALRNGRTGFHTWDALGRKTAANQIGMLSRWDKGEQTP*
Ga0070676_114366971	3300005328	Miscanthus Rhizosphere	ISTLRTSVGEFVFRQTPLGCHLELSVGNVRWALGLYGTNEAAVRALKNGRTGFRTWDALERKTAANQIGTLSRWNKGEQTA*
Ga0070668_1014740412	3300005347	Switchgrass Rhizosphere	FRQTPLGCYLELVVGNARWALGLYGTNEAAVRALRNGRTGFRTWDALGRKTAANQIGMLSRWDKGEQTP*
Ga0070701_100491314	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	KTISTLRTSVGEFVFRQTPLGCYLELVVGNARWALGLFGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEQTP*
Ga0070711_1019403082	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSTLRTSVGEFVFRQTPLGCHLELVVGEARWALGLYGTNEAAVRALKSGRTGFRTWDAMGRKTAANQIGTLSRWNK
Ga0070706_1016744382	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LRTSVGEFVFRQTPLGCYLELVVGNARWALGLYGTDEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEQTP*
Ga0074259_109985852	3300005507	Arabidopsis Rhizosphere	KTISTLRTSVGEFVFRQTPLGCHLELSVGNVRWALGLYGTNEAALRALKNGRTGFRTWDALERKTAANQIGTPSRWNNGEQTA*
Ga0070704_1005521162	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	KTISTLRTSVGEFVFRQTPLGCYLELVVGNVRWALGLFGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEETP*
Ga0066692_105912661	3300005555	Soil	MSLNHRQIASPNKTISTLRTSVGELVSRQTPLGYLELVAGNARWVLGLFGTDEAAICALRDGRTGFRTWDALGRKTAVNQISTLSRWNKDGQTP*
Ga0070664_1019809812	3300005564	Corn Rhizosphere	TISTLRTSVGEFVFRQTPLGCHLELVVGDARWALGLYGTNEAAVRALRNGRTGFHTWDALGRKTAANQIGMLSRWDKGEQTP*
Ga0070716_1002805751	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSTLRTSVGEFVFRQTPLGCHLELSVGNVRWALGLYGTNEAALRALKNGRTGFRTWDALDRRTTADQIGTVSRWNKAEQTA*
Ga0075434_1002561983	3300006871	Populus Rhizosphere	NQQIASPNKTISTLRTSVGEFVFRQTPVGCHLELVVGNARWALGLYGTNEAALRALKNGRTGFRTWDALERKTAANQIDVLSRWNKGEQTA*
Ga0075435_1020006922	3300007076	Populus Rhizosphere	RTSVGEFVFRQTPLGCHLELSVGNARWALGLYGTNEAAVRALKSGRTGFRTWDALGRKTAANQIGTLRRWNKGEQTP*
Ga0105251_101134732	3300009011	Switchgrass Rhizosphere	FRPTPLGCYLELVVCNARWALGLYGTDEAAVRALKNGRTGFRTWDALGHKTAANQIGTLSRWNKGEQTP*
Ga0099827_109440632	3300009090	Vadose Zone Soil	MSLNHRQIASPNKTISTLRTSVGEFVFRQTPLGCYLELVAGNARWALGLYGTNEAAVRALKNGRTGFRTWDALGGKTAANQIGTLNRWNKGEQTP*
Ga0105247_116248081	3300009101	Switchgrass Rhizosphere	SQHHHRQIASANKTISTLRTSVGEFVFRQTPLGCYLDLVVGNVRWALGLYGTNEAALRALKNGRTGFRTWDALGHKTAANQIGTLSRWNKGEQTP*
Ga0105249_112053801	3300009553	Switchgrass Rhizosphere	QHHHRQIASPNKTISTLRTSVGEFVFRQSPLGCHLELSVGNVRWALGLYGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEETP*
Ga0099796_100538832	3300010159	Vadose Zone Soil	MSLNHRQIARPNKTISTLRTSVGEFVFRQTPLGCYLELVAGNARWALGLYGTNEAAVRALKNGRTSFRTWDALGGKTAANQISTLSRWNKDGQTP*
Ga0134086_100312742	3300010323	Grasslands Soil	MSLNHRQIASPNKTISTLRTSVGEFVFRQTPLGCYLELVAGNARWALGLYGTNEAAVRALKNGRTGFRTWDALGGKTAANQIGTLG
Ga0134125_113773371	3300010371	Terrestrial Soil	LIASPNKTISTLRTSVGEFVFRQTLLGCHLEVSVGNVRWALGLYRTNEATVRALKNGRTGFRTWDALGRNTAANQIGTLSRWNKEETL*
Ga0134128_130081412	3300010373	Terrestrial Soil	STLRTSVGEFVFRQTSLGCYLELVVGNACWALGLYGTNEAAVRALKNGRTGLRTWDALGRKTAANQIGTLSRWNKGEQML*
Ga0134122_114939551	3300010400	Terrestrial Soil	RPIASPNEAISTLRTSVGEFVFRQTPLGCHLELSVGKGQWALGLYGTNEAAVRALKNGRTGFRTWDALGCKTAANQIGTLSRWNKGEQTP*
Ga0134123_101239394	3300010403	Terrestrial Soil	GEFVFRQTPLGCHLELVVGDARWALGLYGTNEAAVRALRNGRTGFRTWDALGRKTAANQIGMLSRWDKGEQTP*
Ga0138505_1000294332	3300010999	Soil	NKTISTLRTSVGEFVFRQTLLGCHLELILGNVRWALALYGTNEAAVRALKNGRTGFRMWDALGRKAAANQIGTLSRWNKGEQAA*
Ga0137364_100436654	3300012198	Vadose Zone Soil	MIASPNKTISTLRTSVGEFVFRQTSLGCYLELVVGNARWALGLYGTNEAAVRALKNGRTSFRTWDALGCKTAANQIGTLSRWNKGEQTP*
Ga0137382_103884912	3300012200	Vadose Zone Soil	MSLNHRQIANPNKTISTLRTSVGESVFRQTPLGCYLELVASNARRALGLHGTDEGVRALKDGRTGFRTWDALRRKTAVNQISTLSRWNKDGQTP*
Ga0137363_113534951	3300012202	Vadose Zone Soil	TLRTSVGEFVFRQTPLGCYLEVVVGSARWALGLYGTNEAAVRALKKGRTGFRTWDALGRKTAANQIGTLSRWNKSEQTP*
Ga0137362_112245362	3300012205	Vadose Zone Soil	FRQTPLGCYLELVAGNARWALGLFGTDEAAIRALKNGRTGFRTGHALGRKTAANQIGTLSRWNKGEHTR*
Ga0137381_114142842	3300012207	Vadose Zone Soil	MSLNHRQIASPNKTISTLRTSVGEFVFRQTPLGCYLELVAGNARWALGLYGTNEAAVRALKNGRTGFRTWDALGGKTAANQIGTLSRWNNGEQTP*
Ga0137376_112483802	3300012208	Vadose Zone Soil	GATQTGKKKLFPASSPMIASPNKTISTLRTSVGEFVFRQTSLGCYLELVVGNARWALGLYGTNEAAVRALKNGRTSFRTWDALGCKTAANQIGTLSRWNKGEQTP*
Ga0137377_108826842	3300012211	Vadose Zone Soil	MNPLAAIKMSSNHRQIASPNKTISTLRTSVGEFVSRQTPLGYLELVVGNARWVLGLFGTDEAAIRALKDGRTGFRTWNALGGKTAANQISRLSRWNKDGQTP*
Ga0137372_103003672	3300012350	Vadose Zone Soil	MIASPNKTISTLRTSVGEFVFRQTPLGCYLELVAGNARWVLGLFGTDEAAIRALKNGRTGFRTWDALGGKTAANQIGTLSRWNKDEQTP*
Ga0137366_103603002	3300012354	Vadose Zone Soil	MSLNHRQIASPNKTISTLRTSVGEFVFRQTPLGCYLELVAGNARWALGLFGTDEATVRALKNGRTGFRTWDALGGETAANQIGTLSRWNKGEQTP*
Ga0137361_110653501	3300012362	Vadose Zone Soil	MSLNHRQIASPNKTISTLRTSVGEFVFRQTPLGCYLELVVGNARWALGLYGTNEAAVRALKNGRTGFRTWYALGRKTAANQIGTLSRWNKGEQTP*
Ga0137390_107733912	3300012363	Vadose Zone Soil	MSLNHGQIASPNKTMSTLRTSVGEFVFRQTPLGCHLELVVGEARWALGLYGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGKLSRWNKGEQTA*
Ga0157349_10023041	3300012489	Unplanted Soil	RQIASPNRTISTLRTSVGEFVFRQTLLGCYLELVVGNARWALGLYETNEEAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEETP*
Ga0137358_101522262	3300012582	Vadose Zone Soil	MIASPNKTISTLRTSVGEFVFRQTSLGCYFELVVGNARWALGLYGTNEAAVRALKNGRTSFCTWDALGCKTAANQIGTLSRWNKGEQTP*
Ga0137398_108489391	3300012683	Vadose Zone Soil	MSLNHRQIASPIKTISTLRTSVGEFVFRQTPLGCYLELVAGNARWALGLCGTNEAAVRALKNGRTGFRTWDALGGKTAANQISTLSRWNKDGQTP*
Ga0157282_100229203	3300012904	Soil	SVGEFVFRQTLLGCYLELVVGNARWALGLYETNEEAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWKKAEQTP*
Ga0157283_100637571	3300012907	Soil	HHRQIASPNKTISTLRTSVGEFVFRQTPLGCHLELSVGNVRWALGLYGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEQTP*
Ga0137395_102364192	3300012917	Vadose Zone Soil	MSLNHRQIASPIKTISTLRTSVGEFVFRQTPLGCYLELVAGNARWALGLWGTNEAAVRALKNGRTGFRTWDALGGKTAANQISTLSRWNKDGQTP*
Ga0137394_101967552	3300012922	Vadose Zone Soil	MIASPNKTISTLRTSVGEFVFRQTTLGCYFELVVGTACWALGLYGTNEAAVRALKNGRTGFRTWHTLGRKTAGYQIGTLSRWNKGEQTP*
Ga0137359_106330482	3300012923	Vadose Zone Soil	MSLNHRQIASPNKTISTLRTSVGELVFRQTPLGCYLELVAGNARWAPGLCGTNEAAVRALKNGRTGFRTWDALGRKTAANQISTLSRWNKDGQTP*
Ga0137413_109568872	3300012924	Vadose Zone Soil	MSLNHRQIARPNKTISTLRMSVGEFVFRQTPLGCYLELVVDNARWALGLFGTNEAAVRALKNGRTGFRTWDALERKTAANQIGTLSRWNKGEQTA*
Ga0137413_113911011	3300012924	Vadose Zone Soil	MIASPNKTISTLRTSVGEFVFRQTSLGCYLELVVGNARWALGLFGTNEAAVRALKNGRTGFPTWDALGRRTAANQIGMLSRWNK
Ga0137419_115451322	3300012925	Vadose Zone Soil	VFRHTPLGCYLELVVGNVRRALGLFGTNEAAVRALKNGRTGFRTWDALGRKIAANQISTLSRWTKGEQTP*
Ga0137404_112246293	3300012929	Vadose Zone Soil	MIASPNKTISTLRTSVGEFVFRQTSLGCYLELVVGNARWALGLYGTNEATVRALKNGRTGFRTWDALERETAANQVDTPGRWNKGQQTS*
Ga0137407_110628542	3300012930	Vadose Zone Soil	LRTSLGEFVSRQTPLGCYLEPVAGIARWVLGLFGTDEAAIRALKNGRTGFRTWDALGDKTAANQIGTLSRWNKDGQTP*
Ga0137410_105379862	3300012944	Vadose Zone Soil	MIASPNKTISTLRTSVGEFVFRQTTLVCYFELVVGTACWALGLYGTNEAAVRALKNGRTGFRTWHTLGRKTAGYQIGTLSRWNKGEQTP*
Ga0164300_101650961	3300012951	Soil	HRQIASPNKTNSTLRTSVGEFVFRQTPLGCHLELVVGTARWALGLYGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEQTP*
Ga0164300_109733912	3300012951	Soil	VGEFVFRQTPLGCYLELVVGNARWILGLFGTNEAAVRALKNGRTGFRTWDALRRKTAANQIGTLSRWNKGEQTP*
Ga0134110_100466791	3300012975	Grasslands Soil	HHHRQIASPNKTISTLRTSVGEFVFRQTPLGCYLELVAGNARWALGLYGTNEAAVRALKNGRAGFRTWDALERRTAANQIDTLSRWNKGEQTA*
Ga0164308_120516572	3300012985	Soil	YFQHHHRQIASHNKTVSTLRTSVGEFVFRQTPLGCYLELVVGNARWVLGLFGTNEAAVRALKNGRTGFRTWDALGRKTAANQISTRSRWNKGEQTP*
Ga0164306_118652011	3300012988	Soil	NNAISTLRTSVGEFVFRQTPLGCYLELVIGNARWALGIYGTNEAAVRALKNGRTGFRTWDALGRKIAANQIGTLNRWNKSEQTP*
Ga0164305_116173221	3300012989	Soil	RAIASPNNAISTLRTSVGEFVFRQTPLGCYLELVIGNARWALGIYGTNEAAVRALKNGRTGFRTWDALGRKIAANQIGTLNRWNKSEQTP*
Ga0157379_123706962	3300014968	Switchgrass Rhizosphere	LRMSVGEFVFRQTSLGCYLELVVGSVRWALGLYGTNEAAVRALKNGRTGFRTWDALGHKTAANQIGMLGRWNKGQQTP*
Ga0157376_105706401	3300014969	Miscanthus Rhizosphere	ASPNKTISTLRTSVGEFVFRQTPLGCYLELVVGNARWALGLFGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEQML*
Ga0137405_10847281	3300015053	Vadose Zone Soil	LFPASSPMIASPNKTISTLRTSVGEFVFRQTSLGCYLELVVGNARWALGLYGTNEAAVRALKNGRTSFRTWDALGCKTAANQIGTLSRWNKGEQTP*
Ga0137412_100139952	3300015242	Vadose Zone Soil	MIASPNKTISTLRTSVGEFVFRQTSLGCYLELVVGNARWALGLYGTNEAAVRALKNGRTGFRTWHALGRKTAANQIGTLSRWNKGEQTP*
Ga0137409_100168048	3300015245	Vadose Zone Soil	MIASPNKTISTLRTSVGEFVFRQTPLGCYLELVVGDARWALGLFGTNEAAVRTLKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEQTP*
Ga0132256_1039245372	3300015372	Arabidopsis Rhizosphere	SQHHHRQIASPNKTISTLRTSVGEFVFRQTPLGCYLELVVGNARWALGLYGTNEAAVCALKDGRTGFRTWDALGRKTAANQIGTLSRWNKSEQTP*
Ga0134083_100594052	3300017659	Grasslands Soil	RTSVGEFVSRQTPLGCYLELVAGNARRALGLYGTDEAAVRALKNGRTGFCTWDALERKTAANQISTRSRWNKGGQTP
Ga0184604_103466512	3300018000	Groundwater Sediment	LRTSVGEFVFRQTPLGCYLELVVGSARWALGLFGTNEAALRALKNGRTGFRTWDALERKTAANQIGTLSRWNKGEQTA
Ga0184619_101557502	3300018061	Groundwater Sediment	MIASPNKTISTLRTSVGEFVFRQTPLGCYLELVVGNARWALGLFGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEQTA
Ga0066662_105820912	3300018468	Grasslands Soil	MNLNHRQIASPNKTISTLRTSVGEFVFRQTPLGCYLELVAGNARWALGLYGTNEATVRALENGRTGFRTWDALGRKTAANQISTLSRWNKDGQTP
Ga0173481_105030251	3300019356	Soil	ISTLRTSVGEFVFRQTPLGCHLELSVGNVRWALGLYGTNEAAVRALKNGRTGFRTWDALARGTAANQIGTLSRWNKGEQTA
Ga0137408_11254323	3300019789	Vadose Zone Soil	LRTSLGEFVSRQTPLGCYLEPVAGIARWVLGLFGTDEAAIRALKNGRTGFRTWDALGDKTAANQIGTLSRWNKDGQTP
Ga0137408_11514384	3300019789	Vadose Zone Soil	TISTLRTSVGEFVFRQTPLGCYLELVAGNACWVLGLFGTDEAAIRAPKKGRTGFRTWDALGGKNAANQIGTLSRWNKDGQTP
Ga0137408_13121122	3300019789	Vadose Zone Soil	LRTSVGEFVFRQTPLGCHLELSVGNVRWALGLYGTNEAALRALKNGRTGFRTWDALERKTAADQVGTLSRWNRGKQTA
Ga0193746_10172872	3300019870	Soil	QHHHRQIATANKTISTLRTSVGEFVFRQTPLGCYLELVVGNIRWALGLFGTNEAAVRALKSGRTGFRTWDALGRKTAANQIGTLSRWNKGEQTP
Ga0193722_10113731	3300019877	Soil	GEFVFRQTPLGCFLELVVGNARWALGLFGTNEAAVRALKNGRTGFRTSDALGRRTAANQIGTLSRWNKAEQTP
Ga0193725_10835881	3300019883	Soil	QHHHRQIASPNKTISTLRTSVGEFVFRQTPLGCYLELVVGNARWALGLFGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEQTP
Ga0193727_10126132	3300019886	Soil	MSTLRTSVGEFVFRQTPLGCHLELVVGNARWALGLYGTNEAAVCALRNGRTGFRTWDALDRRTAGNQIGTLSRCNKGQQTA
Ga0193757_10214432	3300020008	Soil	IASPNKTISTLRTSVGEFVFRQTPLGCYLELVVGNARWALGLFGTNEAAVRALKNGRTGFRTWDALGRKTAANQVSTLSRWNKGEQTP
Ga0179594_100099824	3300020170	Vadose Zone Soil	MIASPNKTISTLRTSVGEFVFRQTSLGCYLELVVGNARWALGLYGTNEAAVRALKNGRTSFCTWDALGCKTAANQIGTLSRWNKGEQTP
Ga0210382_102962712	3300021080	Groundwater Sediment	HHLRQIANPIKTISTLRTSVGEFVFRQTSLGCHLELVLGNVRWALGLYGTNEAAVRALKNGRTGFRMWDALERRTAATQIGTLSRWNKGEQTA
Ga0193699_101821052	3300021363	Soil	QIASANKTISTLRTSVGEFVFRQTPLGCYLELVVGNARWALGLFGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEQTQ
Ga0193750_10775912	3300021413	Soil	AIPNKTISTLRTSVGEFVFRQTPLGCYLELVVGNARWALGLFGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKAEQTP
Ga0222622_101556713	3300022756	Groundwater Sediment	MSTLRTSVGEFVFRQTPLGCHLELVVGNARWALGLYGTNEAAVRALKNGRTGFRTWDALDRRTAGNQIGTLSRWNKGEQTA
Ga0207666_10043743	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	IASPNKTISTLRTSVGEFVFRQTPLGCHLELSVGHVHWALGSYGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEETP
Ga0207685_106718692	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	TLRTSVGEFVFRQTPLGCYLELVVGNARWVLGLFGTNEAAVLALKNGRTGFRTWDALGRKTAANQIGTLNRWNKGEQTP
Ga0207684_104376512	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SVGEFVFRQTPLGCHLELSVGNVRWALGLYGTNEAAVRALKNGRTGFRTWDALERRTAATQIGYAEPLEQR
Ga0207679_113776872	3300025945	Corn Rhizosphere	QRALPTTISTLRTSVGEFVFRQAPLGCYLELVVGNARWALGLFGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEQML
Ga0207679_120437392	3300025945	Corn Rhizosphere	LRTSVGEFVFRQTPLGCHLELVVGDARWALGLYGTNEAAVRALRNGRTGFHTWDALGRKTAANQIGMLSRWDKGEQTP
Ga0207676_104893881	3300026095	Switchgrass Rhizosphere	HHHRQIASPNKTISTLRTSVGEFVFRQTPLGCHLELVVGDARRALGLYGTNEAAVRALRNGRTGFHTWDALGRKTAANQIGMLSRWDKGEQTP
Ga0209375_12196201	3300026329	Soil	RNQQIASPNKTISTLRTSVGEFVLRQTPVGCHLELVVGNARWALGLYGTNEAAVRALKNGRAGFRTWDALERRTAANQIDTLSRWNKGEQTA
Ga0207499_1010752	3300026792	Soil	SPNKTISTLRTSVGEFVFRQTPLGCYLELVVGNTRWALGLYGTNEAAVRALKNGRTGFRTWDALGGKTAANQIGTLSRWNKGEQTP
Ga0207578_10172772	3300026933	Soil	QIASPNKTISTLRTSVGEFVFRQTPLGCHLELSVGNARWALGLYGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGMLSRWDKGEQTP
Ga0207618_1015362	3300027433	Soil	ISTLRTSVGEFVFRQTPVGCYLELSVGNVRWALGLYGANEAAVRALKNGRTGFRTWDALERKTAANQIGTPSRWNKGEQTA
Ga0207601_1018762	3300027461	Soil	LRTSVGEFVFRQTQLGCYLELVVGNARWALGLFGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEQTA
Ga0209590_102183061	3300027882	Vadose Zone Soil	RQTPLGCYLELVAGNARWALGLYGTNEAAVRALKNGRTGFRTWRALGGKTAANQISTLSLWNKDGQTP
Ga0209488_100190933	3300027903	Vadose Zone Soil	MSLNHRQIARPNKTISTLRTSVGEFVFRQTPLGCYLELVAGNARWALGLYGTNEAAVRALKNGRTGFRTWHALGRKTAANQIGTLSRWNKGEQTP
Ga0307292_104277341	3300028811	Soil	VGEFVFRQTQLGCYLELVVGNVRWALGLFGTNEAALRALKNGRTGFRTWDALERKTAANQIGTLSQWNKGEQTA
Ga0075388_114018812	3300030848	Soil	HRQIASPNKTISTLRTSVGEFVFRQTPLGCYLELVVGNARWALGLFGTNEAAVRALKNGRTGFRKWDALGHKTAANQIGTLSRWNKGEQTP
Ga0170823_102848312	3300031128	Forest Soil	MSTLRTSVGEFVFRQTPLGCHLELSVGNVRWALGLYGTDEAALRALKNGRTGFRTWDALERKTAANQIGTLSRWNKGEQTA
Ga0307497_103913871	3300031226	Soil	ASPNNAISTLRTSVGEFVFRQTPLGCYLELVIGNARWALGIYGTNEAAVRALKNGRTGFRTWDALGRKIAANQIGTLNRWNKSEQTP
Ga0170824_1079995901	3300031231	Forest Soil	MSTLRTSVGAFVFRQTPLGCHLELVVGNGRWALGLYGTNEAAVRARKNGRTGFRTWDALDRRTAANQIGTLSR
Ga0170824_1147260691	3300031231	Forest Soil	FVFRQTPLGCYLELVVGNARWALGLFGTNEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEQTP
Ga0310885_101730322	3300031943	Soil	HRQIASPSKTISTLRTSVGEFVFRQTQLGCYLELVVGNARWALGLYGTNEAAVRALKNGRTGFRTWDTLGRKTAANQIGTLSRWNKGEQTA
Ga0307479_114596142	3300031962	Hardwood Forest Soil	HHRQVASPNKTISTLRTSVGEFVLRQTPVGCHLELVVGNARWALGLYGTNEAAVRALKNGRTGFRTWDALERKTAATQIGTLNRWNKGEQTA
Ga0310903_100910181	3300032000	Soil	HRQIASPSKTISTLRTSVGEFVFRQTQLGCYLELVVGNARWVLGLFGTNEAAVRALKNGRTGFRTWDSLGRKTAANQIGTLSRWNKGEQTP
Ga0310890_115797691	3300032075	Soil	ISTLRTSVGEFVFRETRLGCHLELVVGNARWALGLYGTNQAAVRALKNGRTGFRTWDALGRKTATNQIGTLSRWNKGEQTP
Ga0307470_109307981	3300032174	Hardwood Forest Soil	QITSPIKTISTLRTSVGEFVFRQTPLGCYLELVVGNARWALGLFGTDEAAVRALKNGRTGFRTWDALGRKTAANQIGTLSRWNKGEQTP
Ga0307471_1030402611	3300032180	Hardwood Forest Soil	SVGEFVFRETPLGCHLELSVGNVRWALGLFGTNEAALRALKNRRTGFRTWDALERKTAADQIGTLSRWNKDEQTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080416

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences