NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080280

Metagenome / Metatranscriptome Family F080280

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080280
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 90 residues
Representative Sequence FVYEIESKVRELRRANPPAEPSPAEQKENRKNNTSGQPEQRQDRNYSQEYNQPVLAALRNASPAVTVTTNRRFV
Number of Associated Samples 103
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.87 %
% of genes near scaffold ends (potentially truncated) 99.13 %
% of genes from short scaffolds (< 2000 bps) 83.48 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.130 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland
(17.391 % of family members)
Environment Ontology (ENVO) Unclassified
(51.304 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(37.391 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 13.73%    β-sheet: 0.00%    Coil/Unstructured: 86.27%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.23
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF00643zf-B_box 73.91
PF01618MotA_ExbB 1.74
PF13349DUF4097 1.74
PF05154TM2 0.87
PF13345Obsolete Pfam Family 0.87
PF14534DUF4440 0.87
PF07676PD40 0.87
PF05977MFS_3 0.87
PF12704MacB_PCD 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG2314Uncharacterized membrane protein YozV, TM2 domain, contains pTyrGeneral function prediction only [R] 0.87
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 0.87


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.13 %
UnclassifiedrootN/A0.87 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000567|JGI12270J11330_10299245All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis501Open in IMG/M
3300001632|JGI20235J16296_1009124All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300004139|Ga0058897_10963555All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300004471|Ga0068965_1232555All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter573Open in IMG/M
3300005602|Ga0070762_10038912All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2580Open in IMG/M
3300006176|Ga0070765_100051734All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3355Open in IMG/M
3300009088|Ga0099830_10076350All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2444Open in IMG/M
3300009518|Ga0116128_1148982All Organisms → cellular organisms → Bacteria → Acidobacteria670Open in IMG/M
3300009522|Ga0116218_1389609All Organisms → cellular organisms → Bacteria → Acidobacteria622Open in IMG/M
3300009548|Ga0116107_1034250All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1851Open in IMG/M
3300009616|Ga0116111_1033775All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1616Open in IMG/M
3300009616|Ga0116111_1164130All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300009624|Ga0116105_1159944All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300009630|Ga0116114_1082306All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui871Open in IMG/M
3300009639|Ga0116122_1017794All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus2587Open in IMG/M
3300009645|Ga0116106_1100787All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium934Open in IMG/M
3300009672|Ga0116215_1394135All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300009709|Ga0116227_11199845All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300009759|Ga0116101_1071852All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300009764|Ga0116134_1214927All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300009824|Ga0116219_10063765All Organisms → cellular organisms → Bacteria → Acidobacteria2170Open in IMG/M
3300009824|Ga0116219_10496608All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui675Open in IMG/M
3300009839|Ga0116223_10155052All Organisms → cellular organisms → Bacteria1420Open in IMG/M
3300009839|Ga0116223_10699189All Organisms → cellular organisms → Bacteria → Acidobacteria582Open in IMG/M
3300010379|Ga0136449_102612934All Organisms → cellular organisms → Bacteria → Acidobacteria720Open in IMG/M
3300011269|Ga0137392_11151613All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300012361|Ga0137360_10386720All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1177Open in IMG/M
3300012363|Ga0137390_10730744All Organisms → cellular organisms → Bacteria951Open in IMG/M
3300012582|Ga0137358_10260024All Organisms → cellular organisms → Bacteria1180Open in IMG/M
3300014151|Ga0181539_1128082All Organisms → cellular organisms → Bacteria → Acidobacteria1034Open in IMG/M
3300014151|Ga0181539_1134966All Organisms → cellular organisms → Bacteria → Acidobacteria998Open in IMG/M
3300014164|Ga0181532_10303531All Organisms → cellular organisms → Bacteria903Open in IMG/M
3300014165|Ga0181523_10084689All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1917Open in IMG/M
3300014168|Ga0181534_10931117All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300017925|Ga0187856_1081886All Organisms → cellular organisms → Bacteria → Acidobacteria1320Open in IMG/M
3300017925|Ga0187856_1085347All Organisms → cellular organisms → Bacteria → Acidobacteria1284Open in IMG/M
3300017934|Ga0187803_10067232All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1410Open in IMG/M
3300017935|Ga0187848_10273840All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300017946|Ga0187879_10379052All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium784Open in IMG/M
3300017946|Ga0187879_10532631All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae652Open in IMG/M
3300017946|Ga0187879_10635414All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300017996|Ga0187891_1306795All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300018002|Ga0187868_1042239All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2001Open in IMG/M
3300018005|Ga0187878_1367086All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300018006|Ga0187804_10050871All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1622Open in IMG/M
3300018006|Ga0187804_10130100All Organisms → cellular organisms → Bacteria1051Open in IMG/M
3300018014|Ga0187860_1295002Not Available630Open in IMG/M
3300018016|Ga0187880_1007168All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7766Open in IMG/M
3300018019|Ga0187874_10050013All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1944Open in IMG/M
3300018020|Ga0187861_10017865All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4374Open in IMG/M
3300018022|Ga0187864_10127511All Organisms → cellular organisms → Bacteria1286Open in IMG/M
3300018025|Ga0187885_10083592All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1572Open in IMG/M
3300018026|Ga0187857_10141969All Organisms → cellular organisms → Bacteria1145Open in IMG/M
3300018030|Ga0187869_10323075All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium741Open in IMG/M
3300018042|Ga0187871_10507272All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae668Open in IMG/M
3300018062|Ga0187784_11665208All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae505Open in IMG/M
3300018088|Ga0187771_10716312All Organisms → cellular organisms → Bacteria849Open in IMG/M
3300019082|Ga0187852_1015470All Organisms → cellular organisms → Bacteria → Acidobacteria3946Open in IMG/M
3300019270|Ga0181512_1663286All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300019877|Ga0193722_1115461All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300022721|Ga0242666_1207859All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300025412|Ga0208194_1062205All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae572Open in IMG/M
3300025442|Ga0208034_1044019All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300025477|Ga0208192_1029005All Organisms → cellular organisms → Bacteria → Acidobacteria1234Open in IMG/M
3300025496|Ga0208191_1011745All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2397Open in IMG/M
3300025500|Ga0208686_1070465All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium779Open in IMG/M
3300025507|Ga0208188_1005928All Organisms → cellular organisms → Bacteria → Acidobacteria4329Open in IMG/M
3300025507|Ga0208188_1102640All Organisms → cellular organisms → Bacteria → Acidobacteria643Open in IMG/M
3300025576|Ga0208820_1041129All Organisms → cellular organisms → Bacteria → Acidobacteria1346Open in IMG/M
3300025922|Ga0207646_11235257All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae654Open in IMG/M
3300026371|Ga0257179_1041518All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium585Open in IMG/M
3300026515|Ga0257158_1032441All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui922Open in IMG/M
3300027334|Ga0209529_1068376All Organisms → cellular organisms → Bacteria → Acidobacteria604Open in IMG/M
3300027521|Ga0209524_1015294All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1564Open in IMG/M
3300027546|Ga0208984_1017362All Organisms → cellular organisms → Bacteria1433Open in IMG/M
3300027565|Ga0209219_1036088All Organisms → cellular organisms → Bacteria1232Open in IMG/M
3300027625|Ga0208044_1124903All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae731Open in IMG/M
3300027648|Ga0209420_1183347All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300027862|Ga0209701_10062927All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2361Open in IMG/M
3300027875|Ga0209283_10776185All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300028090|Ga0255349_1045606All Organisms → cellular organisms → Bacteria → Acidobacteria907Open in IMG/M
3300028560|Ga0302144_10192287All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae660Open in IMG/M
3300028731|Ga0302301_1104680All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium724Open in IMG/M
3300028783|Ga0302279_10005383All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae14359Open in IMG/M
3300028874|Ga0302155_10365081All Organisms → cellular organisms → Bacteria → Acidobacteria618Open in IMG/M
3300029701|Ga0222748_1134894All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300029889|Ga0246001_1013586All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2694Open in IMG/M
3300029907|Ga0311329_10009981All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis8840Open in IMG/M
3300029919|Ga0302141_1045266All Organisms → cellular organisms → Bacteria → Acidobacteria1198Open in IMG/M
3300029945|Ga0311330_10502819All Organisms → cellular organisms → Bacteria → Acidobacteria975Open in IMG/M
3300029954|Ga0311331_10262953All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1880Open in IMG/M
3300029986|Ga0302188_10169336All Organisms → cellular organisms → Bacteria935Open in IMG/M
3300029986|Ga0302188_10474724All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300029990|Ga0311336_10799830All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300029992|Ga0302276_10179421All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300030041|Ga0302274_10221249All Organisms → cellular organisms → Bacteria → Acidobacteria921Open in IMG/M
3300030045|Ga0302282_1061601All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1670Open in IMG/M
3300030045|Ga0302282_1146217All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300030225|Ga0302196_10174239All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300030503|Ga0311370_10317163All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2006Open in IMG/M
3300030688|Ga0311345_10711035All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300030707|Ga0310038_10014768All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5033Open in IMG/M
3300030737|Ga0302310_10207971All Organisms → cellular organisms → Bacteria1140Open in IMG/M
3300030738|Ga0265462_11265210All Organisms → cellular organisms → Bacteria → Acidobacteria665Open in IMG/M
3300030740|Ga0265460_12152459All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300030760|Ga0265762_1089082All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300030855|Ga0075374_11438708All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300031469|Ga0170819_11698193All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300031524|Ga0302320_11602226All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae633Open in IMG/M
3300031788|Ga0302319_10059350All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6004Open in IMG/M
3300032160|Ga0311301_10100945All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5642Open in IMG/M
3300032160|Ga0311301_12607335All Organisms → cellular organisms → Bacteria → Acidobacteria560Open in IMG/M
3300033433|Ga0326726_10849207All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300033545|Ga0316214_1067514All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300033823|Ga0334837_122886All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland17.39%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland15.65%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog13.04%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil11.30%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.09%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil6.09%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog4.35%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.61%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen2.61%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.74%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.74%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.74%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.74%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.87%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.87%
PeatEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat0.87%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.87%
RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Roots0.87%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated0.87%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300001632Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001EnvironmentalOpen in IMG/M
3300004139Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004471Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009518Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150EnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009548Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100EnvironmentalOpen in IMG/M
3300009616Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100EnvironmentalOpen in IMG/M
3300009624Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10EnvironmentalOpen in IMG/M
3300009630Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40EnvironmentalOpen in IMG/M
3300009639Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40EnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009709Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009759Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10EnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300014151Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300017925Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017996Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40EnvironmentalOpen in IMG/M
3300018002Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40EnvironmentalOpen in IMG/M
3300018005Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018014Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40EnvironmentalOpen in IMG/M
3300018016Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40EnvironmentalOpen in IMG/M
3300018019Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150EnvironmentalOpen in IMG/M
3300018020Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100EnvironmentalOpen in IMG/M
3300018022Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40EnvironmentalOpen in IMG/M
3300018025Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100EnvironmentalOpen in IMG/M
3300018026Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100EnvironmentalOpen in IMG/M
3300018030Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300019082Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40EnvironmentalOpen in IMG/M
3300019270Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019877Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1EnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025412Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025442Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025477Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025496Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025500Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025507Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025576Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026371Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-BEnvironmentalOpen in IMG/M
3300026515Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-AEnvironmentalOpen in IMG/M
3300027334Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027521Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027546Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027625Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027648Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028090Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15EnvironmentalOpen in IMG/M
3300028560Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2EnvironmentalOpen in IMG/M
3300028731Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2EnvironmentalOpen in IMG/M
3300028783Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3EnvironmentalOpen in IMG/M
3300028874Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1EnvironmentalOpen in IMG/M
3300029701Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029889Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cmEnvironmentalOpen in IMG/M
3300029907I_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300029919Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2EnvironmentalOpen in IMG/M
3300029945I_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029954I_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029986Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1EnvironmentalOpen in IMG/M
3300029990I_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300029992Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3EnvironmentalOpen in IMG/M
3300030041Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1EnvironmentalOpen in IMG/M
3300030045Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3EnvironmentalOpen in IMG/M
3300030225Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_3EnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030688II_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030737Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2EnvironmentalOpen in IMG/M
3300030738Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assemblyEnvironmentalOpen in IMG/M
3300030740Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assemblyEnvironmentalOpen in IMG/M
3300030760Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030855Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033545Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4Host-AssociatedOpen in IMG/M
3300033823Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1029924523300000567Peatlands SoilNAVGVKAKDVAKIDLRPAAVRHAYNGAQIWVVQHYENIRFVYEIESKLRELKRANPPAEPPPAETKENRKNNTSGQPEQRQDRNYSREYSQPVLAALRDASPVAAATTNRRFV*
JGI20235J16296_100912413300001632Forest SoilQKQNRKNNGSGQSEHNSPDQKQDRNYSREYNQPVLAALRTGVGNASPALKVEMNATTNRRFV*
Ga0058897_1096355513300004139Forest SoilLKRANTPAEPAPKEQKENRKNNTSGQPDQRQDRNYSQEYNQPILAALRDAEPAVAVSHNATINRRFV*
Ga0068965_123255523300004471Peatlands SoilFFSFSLALNAVGVKAKDVAKIDLRPAAVRHAYNGAQIWVVQHYENIRFVYEIESKLRELKRANPPAEPPPAETKENRKNNTSGQPEQRQDRNYSQEYNQPVLAALRDASPAAVTAALTANINRRFV*
Ga0070762_1003891213300005602SoilLKRANTPDQPAPEEQKQNRKNNGSGQSEHNSPDQKQDRNYSREYNQPVLAALRTGVGNASPALKVEMNATTNRRFV*
Ga0070765_10005173413300006176SoilYDNIRFVYEIESKVRELKRANTPAEPAPKEQKDNRKNNTSGQPDQRQDRNYSREYNQPILAALRDAEPAVAVSRNATMNRRFV*
Ga0099830_1007635013300009088Vadose Zone SoilIESKVRELKRANTPAEPGPKEQKENRKNNTSGQPDQRQDRNYSREYNQPILAALRDAPPAVAVSFNATMNRRFV*
Ga0116128_114898223300009518PeatlandKYYDNIRFVYEIESKLRELKRANTPAEPGPEPPKENRKNNTSGQPEERQDRNYSQEYNQPVLAALRDGAPMTPVLRDGAGDASPAVTVTTNRRFV*
Ga0116218_138960923300009522Peatlands SoilKAKDVAKIDLRPAAVRHAYNGAQVWVVQHYENIRFVYEIESKLRELKRANPPAEPLPAEPKEHRKNDTSGQPEQRQDRNYSQEYSQPVLAALRDATPAAAATTNRRFV*
Ga0116107_103425013300009548PeatlandLRPAAIRHAYNDAQIRVVKYYDNIRFVYEIESKLRELKRANTPAEPGPAEQKENRKNNTSGQPDQRQDRNYSQEYNQPVLAALRAGAPITPVLGDGVGDAAPAVTVALTATTNRRFV*
Ga0116111_103377513300009616PeatlandNLRPAALRHAYNDAQIKIVKYYDNIRFVYEIESKVRELKRANTPAEPGPEEQKEKRKTNTSGQPDQRQDRNYSREYNQPVLAALRDAPPAMTVAVTAITNRRFV*
Ga0116111_116413013300009616PeatlandRFVYEIESKLRELKRANTPAEPGPEPPKENRKNNTSGQPEERQDRNYSQEYNQPVLAALRDGAPMTPVLRDGAGDASPAVTVTTNRRFV*
Ga0116105_115994423300009624PeatlandLRELKRTSTPAEPSPEEPKQNHKNDTSGQPDQRQDRNYSQDYNQPVLAALRSGVPIAPVLRDGIGNAPPAVTVAMNRRFV*
Ga0116114_108230623300009630PeatlandGMIFFSFSLALSAAGVKPKDVAKVSLRPAAIRHAYNDAQIRVVKYYDNIRFVYEIESKLRELKRANTPAEPGPAEQKENRKNNTSGQPDQRQDRNYSQEYNQPVLAALRAGAPITPVLRDGLGDAAPAVTVALTATTNRRFV*
Ga0116122_101779433300009639PeatlandKYYDNIRFVYEIESKLRELKRANTPAEPGPEPPKENRKNNNDTSGQPEQRQDRNYSQEYNQPVLAALRDATPAVTVAVTANTNRRFV*
Ga0116106_110078723300009645PeatlandRPAALRHAYNDAQIRVVKYYDNIRFVYEIESKLRELKRANTPAEPGPEPPKENRKNNNDTSGQPEQRQDRNYSQEYNQPVLAALRDATPAVTVAVTANTNRRFV*
Ga0116215_139413523300009672Peatlands SoilRFVYEIESKLRELKRANPPAEPPPAETKENRKNNTSGQPEQRQDRNYSREYSQPVLAALRTGAPITRVWRDGVGDASPAVAVTTNRRFV*
Ga0116227_1119984523300009709Host-AssociatedEIESKVRELKRANTPAEPAPSEQKDNRNKNNTSGQPEQRQDRNYSQDYSQPILAALQAGDPNTPFLRDGVRRAEPAVPVTTNRRFV*
Ga0116101_107185213300009759PeatlandVRELKRANTPAEPVPSEQKDNRNKNNTSGAPEQRQDRNYSQDYSQPILAALQAGDPNAPLLRDGVRRAKPAVPVTTNRRFV*
Ga0116134_121492723300009764PeatlandLALNAAGVKAKDVAKVDLRPAALRHAYNGAQVWVVQHYENIRFMYEIESKLRELKRANPPAEPLPAEPKENRKNNTSGQPEQRQDRNYSQEYSQPVLAALRDASPAAATAALTANINRRFV*
Ga0116219_1006376533300009824Peatlands SoilENIRFVYEIESKLRELKRANPPAEPPPAETKENRKNNTSGQPEQRQDRNYSREYSQPVLAALRDASPVAAATTNRRFV*
Ga0116219_1049660823300009824Peatlands SoilGMIFFSFSLALNAVGVKAKDVAKIDLRPAAVRHAYNGAQVWVVQHYENIRFVYEIESKLRELKRANPPAEPLPAEPKEHRKNDTSGQPEQRQDRNYSQEYSQPVLAALRDATPAAAATTNRRFV*
Ga0116223_1015505223300009839Peatlands SoilRFVYEIESKVRELKRANTPAEPGPEQPKENRKNNTSGQPEQRQDRNYSQEYSQPVLAALRTGAPITRVWRDGVGDASPAVAVTTNRRFV*
Ga0116223_1069918913300009839Peatlands SoilSDVAKVSLRPAALRHAYNDTQIKIVKYYDNIRFVYEIESKVRELKRANTPAEPGPEEQKENRKNNTSGQPDQRQDRNYSQEYNQPVLAALRNAPPAVPGTTNRRFV*
Ga0136449_10261293423300010379Peatlands SoilAVRHAYNGAQVWVVQHYENIRFVYEIESKLRELKRANPPAEPPPAETKENRKNNTSGQPEQRQDRNYSREYSQPVLAALRDASPVAAATTNRRFV*
Ga0137392_1115161323300011269Vadose Zone SoilRFVYEIESKVRELKRANTPAEPAPKEQKENRKNNTSGQPDHVSPDQRQDRNYSQEYNQPVLAALRDAPPAVAVSFNATMNRRFV*
Ga0137360_1038672013300012361Vadose Zone SoilLRPSALQHAYNDAQIKIVKYYDNIRFVYEIESKVRELKRANTPAEPAPKEQKENRKNNTSGQPDQRQDRNYSQEYKQPVLAALRDASPAVAVSSNATKNRRFV*
Ga0137390_1073074423300012363Vadose Zone SoilLKRANTPAEPAPKEQKENRKNNTSGQPDHVSPDQRQDRNYSQEYNQPVLAALRDAPPAVAVSFNATMNRRFV*
Ga0137358_1026002413300012582Vadose Zone SoilIRFVYEIESKVRELKRANTPAEPAPKEQKENRKNNTSGQPDQRQDRNYSQEYNQPILAALRDAEPAVAASHNATMNRRFV*
Ga0181539_112808223300014151BogKYYDNIRFVYEIESKLRELKRANTPAEPGPAEQKENRKNNTSGQPDQRQDRNYSQEYNQPVLAALRAGAPITPVLRDGLGDAAPAVTVALTATTNRRFV*
Ga0181539_113496623300014151BogKYYDNIRFVYEIESKLRELKRANTPAEPGPAEQKENRKNNTSGQPDQRQDRNYSQEYNQPVLAALRAGAPITPVLGDGVGDAAPAVTVALTATTNRRFV*
Ga0181532_1030353123300014164BogKLRELKRANPPAEPLPAEPKENRKNNTSGQPDQRQDRNYSQEYNQPVLAALRDVSPAVTATTNRRFV*
Ga0181523_1008468933300014165BogFVYEIESKVRELRRANPPAEPSPAEQKENRKNNTSGQPEQRQDRNYSQEYNQPVLAALRNASPAVTVTTNRRFV*
Ga0181534_1093111723300014168BogVRELKRANTPAEPAEQKQNPKDNTSGQPEQRQDRNYSQDYNQTVFAALREAPPAVSTTTNRRSV*
Ga0187856_108188613300017925PeatlandKYYDNIRFVYEIESKLRELKRANTPAEPGPAEQKENRKNNTSGQPDQRQDRNYSQEYNQPVLAALRAGAPITPVLRDGLGDAAPAVTVALTATTNRRFV
Ga0187856_108534713300017925PeatlandKYYDNIRFVYEIESKLRELKRANTPAEPGPAEQKENRKNNTSGQPDQRQDRNYSQEYNQPVLAALRAGAPITPVLGDGVGDAAPAVTVALTATTNRRFV
Ga0187803_1006723223300017934Freshwater SedimentSFSLALNAAGVKPSDVAKVGLRPAALRHAYNDAQIKIVKYYDNIRFVYEIESKLRELKRANPPAEPPPVEPKENRKNNTSGQPEQRQDRNYSREYNQPVLAALGDATPAAAATTNRRFV
Ga0187848_1027384023300017935PeatlandVRELKRANTPAAPGPEYQNNEPKENRKNDTSGQPEERQDRNYSQEYNQPVLAALRDGAPITPVLRDAVASAPPAATVALTATSTATFAATMNRRLV
Ga0187879_1037905223300017946PeatlandFVYEIESKMRELKRANPPAEPGPEEPKPNHKNDTSGQPDQRQDRNYSQEYNQPVLAALRDTSPAVTAASTTTINRRFV
Ga0187879_1053263113300017946PeatlandLRPAALRHAYNDAQIKVVKFYDNIRFVYEIESKVRELKRANAPAETAPSEPKERKNNDTSGQPDQRQDRNYSQEYNQPMLAALNGPPAVTRTTNRRLV
Ga0187879_1063541413300017946PeatlandSKLRELKRANPPAEPLPAEPKENRKNNTSGQPEQRQDRNYSQEYSQPVLAALRDASPAAETAALTANINRRFV
Ga0187891_130679513300017996PeatlandIRFVYEIESKLRELKRANTPAEPGPAEQKENRKNNTSGQPDQRQDRNYSQEYNQPVLAALRAGAPITPVLRDGLGDAAPAVTVALTATTNRRFV
Ga0187868_104223933300018002PeatlandVKYYDNIRFVYEIESKLRELKRANTPAEPGPEPPKENRKNNTSGQPEERQDRNYSQEYNQPVLAALRDGAPMTPVLRDGAGDASPAVTVTTNRRFV
Ga0187878_136708613300018005PeatlandYYDNIRFVYEIESKLRELKRANTPAEPSPEPPKENRKNNTSGQPEERQDRNYSQEYNQPVLAALRDGAPMTSVLRDGAGDASPAVTVTTNRRFV
Ga0187804_1005087113300018006Freshwater SedimentVRELKRANTPAEPGPEEQKEKRKNNTSGQPDQRQDRNYSREYNQPVLAALQAGAPITPVLRDGVGDAPPAMTVAVNATTNRRFV
Ga0187804_1013010023300018006Freshwater SedimentVYEIESKVRELKRANTPAEPGPPEQRQDRKNDTSGQPDQRQDRNYSQEYNQPMLAALRDASPAVTVTTNRRFV
Ga0187860_129500213300018014PeatlandSKLRELKRANTPAEPGPEPPKENRKNNTSGQPEERQDRNYSQEYNQPVLAALRDGAPMTPVLRDGAGDASPAVTVTTNRRFV
Ga0187880_100716813300018016PeatlandFVYEIESKLRELKRANTPAEPGPEPPKENRKNNTSGQPEERQDRNYSQEYNQPVLAALRDGAPMTPVLRDGAGDASPAVTVTTNRRFV
Ga0187874_1005001333300018019PeatlandFVYEIESKLRELKRANTPAEPSPEPPKENRKNNTSGQPEERQDRNYSQEYNQPVLAALRDGAPMTPVLRDGAGDASPAVTVTTNRRFV
Ga0187861_1001786513300018020PeatlandDLRPAALRHAYNDAQIKIVKYYDNIRFVYEIESKLRELKRANTPAEPGPAEQKENRKNDTSGQPDQRQDRNYSQEYNQPVLAALRAGAPITPVLGDGVGDAAPAVTVALTATTNRRFV
Ga0187864_1012751123300018022PeatlandFVYEIESKLRELKRANTPAEPGPAEQKENRKNNTSGQPDQRQDRNYSQEYNQPVLAALRAGAPITPVLRDGLGDAAPAVTVALTATTNRRFV
Ga0187885_1008359233300018025PeatlandQHYENVRFVYEIESKLHELKRANPPAEPLPAEPKENRKNNTSGQPEQRQDRNYSQEYNQPVLAALRDVSPAVTATTNRRFV
Ga0187857_1014196913300018026PeatlandSKLRELKRANTPAEPGPEPPKENRKNNNDTSGQPEQRQDRNYSQEYNQPVLAALRDATPAVTVAVTANTNRRFV
Ga0187869_1032307513300018030PeatlandNIRFVYEIESKVRELKRASTPAEPGPEYQKNEQKENRKNDTSGQPDQRQDRNYSQDYHEPVLAALRNASPAVTVAVTATTNRRFV
Ga0187871_1050727223300018042PeatlandGMIFFSFSLALSIAGVKPADVAKVDLRPAALRHAYNDAQIKVVKFYDNIRFVYEIESKVRELKRANAPAETAPSEPKERKNNDTSGQPDQRQDRNYSQEYNQPMLAALHGPPAVTRTTNRRLI
Ga0187784_1166520823300018062Tropical PeatlandKDVGKIDLRPAAVRHAYNGAQVWVVQHYENIRFVYEIESKVRELKRANPPVEAPPAETKENRKNNTSGQPEQRQDRNYSREYNQPVLAALRDASPVVAAATNRRFV
Ga0187771_1071631223300018088Tropical PeatlandFVYEIESKLRELKRANPPAEAPPAETKENRKNNTSGQPEQRQDRNYSREYNQPVLAALRDASPVAAATTNRRFV
Ga0187852_101547053300019082PeatlandRFVYEIESKLRELKRANTPAEPGPEPPKENRKNNNDTSGQPEQRQDRNYSQEYNQPVLAALRDATPAVTVAVTANTNRRFV
Ga0181512_166328613300019270PeatlandYYDNIRFVYEIESKVRELKRANTPAEPAPSEQKDNRNENNTSGQPEQRQDRNYSQDYSQPILAALQAGDPNAPLLRDGVRRANLPCL
Ga0193722_111546113300019877SoilELKRANTPADSNTEERKDNRKNNTSGQPEQRQDRNYSQEYNQPVLAALRSGAPVERSLLDGIGDAPPAVRGTTNRRFV
Ga0242666_120785923300022721SoilPEEQKQNRKNNGSGQSEHNSPDQKQDRNYSREYNQPVLAALRTGVGNASPALKVEMNATTNRRFV
Ga0208194_106220513300025412PeatlandDVAKVSLRPAVVRHAYNDAQIKVVQYYDNIRFVYEIESKVRELKRANTPAEPAEQKQNPKDNTSGQPEQRQDRNYSQDYNQPVFAALREAPPAVSTTTNRRSV
Ga0208034_104401923300025442PeatlandYEIESKVRELKRANTPAEPGPEEQKEKRKTNTSGQPDQRQDRNYSREYNQPVLAALRDAPPAMTVAVTAITNRRFV
Ga0208192_102900513300025477PeatlandIRHAYNDAQIRVVKYYDNIRFVYEIESKLRELKRANTPAEPGPAEQKENRKNNTSGQPDQRQDRNYSQEYNQPVLAALRAGAPITPVLGDGVGDAAPAVTVALTATTNRRFV
Ga0208191_101174513300025496PeatlandVVKYYDNIRFVYEIESKLRELKRANTPAEPGPEPPKENRKNNNDTSGQPEQRQDRNYSQEYNQPVLAALRDATPAVTVAVTANTNRRFV
Ga0208686_107046523300025500PeatlandNTPAEPGPEPPKENRKNNNDTSGQPEQRQDRNYSQEYNQPVLAALRDATPAVTVAVTANTNRRFV
Ga0208188_100592813300025507PeatlandVKYYDNIRFVYEIESKLRELKRANTPAEPGPAEQKENRKNNTSGQPDQRQDRNYSQEYNQPVLAALRAGAPITPVLGDGVGDAAPAVTVALTATTNRRFV
Ga0208188_110264013300025507PeatlandVKYYDNIRFVYEIESKLRELKRANTPAEPGPAEQKENRKNNTSGQPDQRQDRNYSQEYNQPVLAALRAGAPITPVLRDGLGDAAPAVTVALTATTNRRFV
Ga0208820_104112913300025576PeatlandPAALRHAYNDAQIRVVKYYDNIRFVYEIESKLRELKRANTPAEPGPAEQKENRKNNTSGQPDQRQDRNYSQEYNQPVLAALRAGAPITPVLRDGLGDAAPAVTVALTATTNRRFV
Ga0207646_1123525723300025922Corn, Switchgrass And Miscanthus RhizosphereVVKYYDNIRFVYEIESKVRELKRANTPAEPAPKEQKENRKNNTSGQPDQRQDRNYSREYNQPVLAALRDGAPITPVLRDGVGDAPPTVAVSFNATMNRRFV
Ga0257179_104151813300026371SoilYYDNIRFVYEIESKVRELKRANTPAEPAPKEQKENRKNNTSGQPDQRQDRNYSREYNQPILAALRDAEPAVAVSHNATMNRRFV
Ga0257158_103244123300026515SoilVAKVNLRPSALRHAYNDAQIKVVKFYDNIRFVYEIESKVRELKRANTPAEPAPKEQKENRKNNTSGQPDQRQDRNYSREYNQPILAALRDAEPAVAVSHHATMNRRFV
Ga0209529_106837623300027334Forest SoilALRHAYNDAQIKVVKFYDNIRFVYEIESKVRELKRANTPAENAPSEPKERKNNNDTSGQPDQRQDRNYSQEYNQPMLAALHGPPAVTRTTNRRLV
Ga0209524_101529433300027521Forest SoilESKVRELKRANTPAEPAPKEQKENRKNNTSGQPDQRQDRNYSREYNQPILAALRDAEPAVAVSHNATMNRRFV
Ga0208984_101736213300027546Forest SoilIRFVYEIESKVREMKRANTPAEPAPKEQKENRKNNTSGQPDHGSPDQRQDRNYSREYNQPVLAALRDGVPITPVLRDGVRDAPPAVAVSFNATMNRRFV
Ga0209219_103608813300027565Forest SoilKVRELKRANTPAEPAPKEQKENRKNNTSGQPDHVGPDQRQDRNYSREYNQPVLAALRDAPPAVAVSFNATMNRRFV
Ga0208044_112490313300027625Peatlands SoilLNAVGVKAKDVAKIDLRPAAVRHAYNGAQVWVVQHYENIRFVYEIESKLRELKRANPPAEPPPAETKENRKNNTSGQPEQRQDRNYSREYSQPVLAALRDASPVAAATTNRRFV
Ga0209420_118334713300027648Forest SoilYDNIHFVYEIESKLRELKRANTPDEPAPAEQQKDNHKNNTSGQPDQKQDRNYSGEYNQPILAALRTGIPIARALRDEVENFSPAVSGNTNRRFV
Ga0209701_1006292733300027862Vadose Zone SoilRANTPAEPGPKEQKENRKNNTSGQPDQRQDRNYSREYNQPILAALRDGAPITPVLRDGVGDAPPAVAVSFNATMNRRFV
Ga0209283_1077618513300027875Vadose Zone SoilFVYEIESKVRELKRANTPAEPGPEQPKENRKNNTSGQPGHGRQDQRQDRNYSQEYNQPVLAALRDAPPAVAVTKNRRFV
Ga0255349_104560623300028090SoilVVRHAYNDAQIKVVQYYDNIRFVYEIESKVRELKRANTPAEPAEQKQNPKNNTSGQPEQRQDRNYSQDYNQPVFAALREAPPAVSTTTNRRSV
Ga0302144_1019228713300028560BogDLRPSALRHAYNDAQIKVVQYYDNIRFVYEIESKVRELKRANTPAEPVPSEQKDNRNKNNTSGAPEQRQDRNYSQDYSQPILAALQAGDPNAPLLRDGVRRAKPAVPVTTNRRFV
Ga0302301_110468023300028731PalsaYDNIRFVYEIESKLRELKRANTPAEPGPAAEPKQNHKNDTSGQPDQRQDRNYSQEYNQPVLAALRDASPAAMVTLTATGNRRFV
Ga0302279_10005383113300028783BogVYEIESKVRELKRANTPAEPAEQKQNPKDNTSGQPEQRQDRNYSQDYNQPVFAALREAPPAVSTTTNRRSV
Ga0302155_1036508123300028874BogKVVQYYDNIRFVYEIESKVRELKRANTPAEPVPSEQKDNRNKNNTSGAPEQRQDRNYSQDYSQPILAALQAGDPNAPLLRDGVRRAKPAVPVTTNRRFV
Ga0222748_113489423300029701SoilYYDNIRFVYEIESKVRELKRANTPAEPAPKEQKDNRKNNTSGQPDQRQDRNYSQEYNQPIFAALRDAEPAAAVSHHATMNRRFV
Ga0246001_101358613300029889PeatLKRANPPAEPLPAEPKENRKNNTSGQPDQRQDRNYSQEYNQPVLAALRDVSPAVTATTNRRFV
Ga0311329_1000998163300029907BogRPAVVRHAYNDAQIKVVQYYDNIRFVYEIESKVRELKRANTPAEPAEQKQNPKNNTSGQPEQRQDRNYSQDYNQPVFAALREAPPAVSTTTNRRSV
Ga0302141_104526613300029919BogAQIKVVQYYDNIRFVYEIESKVRELKRANTPAEPAEQKQNPKNNTSGQPEQRQDRNYSQDYNQPVFAALREAPPAVSTTTNRRSV
Ga0311330_1050281913300029945BogRPAVVRHAYNDAQIKVVQYYDNIRFVYEIESKVRELKRANTPAEPAEQKQNPKDNTSGQPEQRQDRNYSQDYNQPVFAALREAPPAVSTTTNRRSV
Ga0311331_1026295333300029954BogESKVRELKRANTPAEPGASEQKDNRNKSNTSGQPEQRQDRNYSQEYSQPIMAALRGAKPAVPETTNRRYV
Ga0302188_1016933623300029986BogSKVRELKRANTPAEPAEQKQNPKNNTSGQPEQRQDRNYSQDYNQPVFAALREAPPAVSTTTNRRSV
Ga0302188_1047472423300029986BogYDNIRFVYEIESKVRELKRANTPAEPAPSEQKDNRNKNNTSGQPEQRQDRNYSQDYSQPTLAALQAGDPNSPILRDGVRRAEPAVPVTTNRRFV
Ga0311336_1079983023300029990FenVYEIESKVRELKRANTPAEPGPEPQKENRKNNTSGQPEQRQDRNYSQEYNQPVLAALRDAPPVTVTTNRRFV
Ga0302276_1017942123300029992BogIRFVYEIESKVRELKRANTPAEPAEQKQNPKDNTSGQPEQRQDRNYSQDYNQPVFAALREAPPAVSTTTNRRSV
Ga0302274_1022124923300030041BogIKVVQYYDNIRFVYEIESKVRELKRANTPAEPVPSEQKDNRNKNNTSGAPEQRQDRNYSQDYSQPILAALQAGDPNAPLLRDGVRRAKPAVPVTTNRRFV
Ga0302282_106160133300030045FenRFVYEIESKVRELKRANTPAEPAEQKQNPKNNTSGQPEQRQDRNYSQDYNQPVFAALREAPPAVSTTTNRRSV
Ga0302282_114621723300030045FenFESKVRELKRANTPAEPGASEQKDNRNKSNTSGQPEQRQDRNYSQEYSQPIMAALRGAKPAVPETTNRRYV
Ga0302196_1017423923300030225BogIRFVYEIESKVRELKRANTPAEPAEQKQNPKNNTSGQPEQRQDRNYSQDYNQPVFAALREAPPAVSTTTNRRSV
Ga0311370_1031716313300030503PalsaALRHAYNDAQIKVVQYYDNIRFVYEIESKLRELKRANTPAEPGPAPQKENPKNNTSGQPEQRQDRNYSQEYNQPVLAALRGGVGNASPAVTATTNRRFV
Ga0311345_1071103523300030688BogIESKVRELKRANTPAEPAPSEQKDNRNKNNTSGQPEQRQDRNYSQDYSQPTLAALQAGDPNSPILRDGVRRAEPAVPVTTNRRFV
Ga0310038_1001476863300030707Peatlands SoilYEIESKLRELKRANPPAEPLPAEPKEHRKNDTSGQPEQRQDRNYSQEYSQPVLAALRDATPAAAATTNRRFV
Ga0302310_1020797123300030737PalsaIRFVYEIESKLRELKRANTPAEPGPAPQKENPKNNTSGQPEQRQDRNYSQEYNQPVLAALRGGVGNASPAVTATTNRRFV
Ga0265462_1126521013300030738SoilVKYYDNIRFVYEIESKLRELKRSNTPAEPGPVEQPKDNRKNNTSGQPDNGRPDQRQDLNYSQEYNQPVLAALRSGASITLVMRDGVGNALPAVTVTTNRRFV
Ga0265460_1215245913300030740SoilANTPAEPGPAPQKENPKNNTSGQPEQRQDRNYSQEYNQPVLAALRDGVGNASVTATTNRRLV
Ga0265762_108908223300030760SoilVYEIESKVRELKRANTPAENAPSEPKERKNNNDTSGQPDQRQDRNYSQEYNQPMLAALHGPPAVTRTTNRRLV
Ga0075374_1143870813300030855SoilVKYYDNIRFVYEIESKVRELKRANTPAEPAPKEQKDNRKNNTSGQPDQSSPNQRQDRNYSREYNQPILAALRDAEPAVAVSHNATMNRRFV
Ga0170819_1169819313300031469Forest SoilEIESKVRELKRANTPAEPAPKEQKDNRKNNTSGQPDQSSPNQRQDRNYSREYNQPILAALRDAEPAVAVSHNATMNRRFV
Ga0302320_1160222623300031524BogVAKVDLRPSALRHAYNDAQIKVVQYYDNIRFVYEIESKVRELKRANTPAEPVPSEQKDNRNKNNTSGAPEQRQDRNYSQDYSQPILAALQAGDPNAPLLRDGVRRAKPAVPVTTNRRFV
Ga0302319_1005935053300031788BogKVVQYYDNIRFVYEIESKVRELKRANTPAEPVPSEQKDNRNKNNTSGAPEQRQDRNYSQDYSQPILAALQAGDPNAPLLRDGARRAKPAVPVTTNRRFV
Ga0311301_1010094563300032160Peatlands SoilAAVRHAYNGAQVWVVQHYENIRFVYEIESKLRELKRANPPAEPPPAETKENRKNNTSGQPEQRQDRNYSREYSQPVLAALRDASPVAAATTNRRFV
Ga0311301_1260733513300032160Peatlands SoilAAVRHAYNGAQVWVVQHYENIRFVYEIESKLRELKRANPPAEPLPAEPKENRKNNTSGQPEQRQDRNYSQEYNQPVLAALRDASPAAAATTNRRFV
Ga0326726_1084920723300033433Peat SoilEIESKVREIKRATQPAEPAAEPPKENPKNNTSGQPDQRQDRNYSRDENQPVLAALPDADAPPAVARTMNRRFV
Ga0316214_106751423300033545RootsELKRANTPDQPVPAEQQKDNHKNDTSGQPDQKQDRNYSGEYNQPVLAALRTGVPIAPLLRAGAANSPAVTVTTNRRFV
Ga0334837_122886_1_4143300033823SoilSFSLALSAAGVKPKDVAKVSLRPAAIRHAYNDAQIRVVKYYDNIRFVYEIESKLRELKRANTPAEPGPAEQKENRKNNTSGQPDQRQDRNYSQEYNQPVLAALRAGAPITPVLGDGVGDAAPAVTVALTATTNRRFV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.