Metagenome / Metatranscriptome Family F080238

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080238
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	37 residues
Representative Sequence	MEEKLTEFEKMLKELEKKPVPERTCNIDDENCESCSG
Number of Associated Samples	90
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	53.04 %
% of genes near scaffold ends (potentially truncated)	10.43 %
% of genes from short scaffolds (< 2000 bps)	52.17 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.783 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (23.478 % of family members)
Environment Ontology (ENVO)	Unclassified (70.435 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (79.130 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.92% β-sheet: 0.00% Coil/Unstructured: 83.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF08291	Peptidase_M15_3	29.57
PF13385	Laminin_G_3	6.09
PF01510	Amidase_2	4.35
PF04466	Terminase_3	3.48
PF04860	Phage_portal	1.74
PF00118	Cpn60_TCP1	0.87
PF00145	DNA_methylase	0.87
PF14550	Peptidase_S78_2	0.87
PF00534	Glycos_transf_1	0.87
PF03592	Terminase_2	0.87
PF00166	Cpn10	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1783	Phage terminase large subunit	Mobilome: prophages, transposons [X]	3.48
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.87
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.87
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.87
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
All Organisms	root	All Organisms	45.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
cellular organisms	root	All Organisms → cellular organisms	33.04 %
Viruses	superkingdom	All Organisms → Viruses	12.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	23.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	21.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.17 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.61 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	21.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.17 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.61 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	21.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.17 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.61 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	21.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.17 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.74 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.87 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	21.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.17 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.74 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.87 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	21.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.17 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.74 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.87 %
Crocinitomicaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	21.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.17 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.74 %
unclassified Crocinitomicaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae	0.87 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	21.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.17 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.74 %
Crocinitomicaceae bacterium TMED209	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	0.87 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918005\|contig00927	Not Available	836	Open in IMG/M
3300000101\|DelMOSum2010_c10001092	Not Available	22280	Open in IMG/M
3300000116\|DelMOSpr2010_c10001176	Not Available	16167	Open in IMG/M
3300000116\|DelMOSpr2010_c10079205	All Organisms → Viruses → Predicted Viral	1307	Open in IMG/M
3300000116\|DelMOSpr2010_c10119840	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	952	Open in IMG/M
3300000117\|DelMOWin2010_c10006883	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	6771	Open in IMG/M
3300000223\|LPjun09P410mDRAFT_1004091	Not Available	1402	Open in IMG/M
3300000928\|OpTDRAFT_10375548	Not Available	630	Open in IMG/M
3300001349\|JGI20160J14292_10000216	Not Available	54737	Open in IMG/M
3300001450\|JGI24006J15134_10001398	Not Available	13740	Open in IMG/M
3300001450\|JGI24006J15134_10006255	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	6131	Open in IMG/M
3300001450\|JGI24006J15134_10047619	All Organisms → cellular organisms → Bacteria	1774	Open in IMG/M
3300001460\|JGI24003J15210_10000940	Not Available	12617	Open in IMG/M
3300001589\|JGI24005J15628_10002958	All Organisms → cellular organisms → Bacteria	8680	Open in IMG/M
3300001833\|ACM24_1001283	All Organisms → cellular organisms → Bacteria	6162	Open in IMG/M
3300005735\|Ga0076923_146292	Not Available	1025	Open in IMG/M
3300005821\|Ga0078746_1008868	All Organisms → cellular organisms → Bacteria	2010	Open in IMG/M
3300005837\|Ga0078893_10448420	Not Available	32012	Open in IMG/M
3300006191\|Ga0075447_10065224	Not Available	1311	Open in IMG/M
3300006467\|Ga0099972_10166331	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	898	Open in IMG/M
3300006467\|Ga0099972_12886833	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	562	Open in IMG/M
3300006735\|Ga0098038_1000790	Not Available	13798	Open in IMG/M
3300006737\|Ga0098037_1001126	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	12435	Open in IMG/M
3300006737\|Ga0098037_1082986	Not Available	1123	Open in IMG/M
3300006737\|Ga0098037_1112702	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300006737\|Ga0098037_1251401	Not Available	567	Open in IMG/M
3300006752\|Ga0098048_1000504	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	18501	Open in IMG/M
3300006752\|Ga0098048_1002578	Not Available	7586	Open in IMG/M
3300006752\|Ga0098048_1044604	All Organisms → Viruses → Predicted Viral	1406	Open in IMG/M
3300006789\|Ga0098054_1001850	Not Available	10316	Open in IMG/M
3300006916\|Ga0070750_10001619	Not Available	12546	Open in IMG/M
3300006916\|Ga0070750_10016237	Not Available	3824	Open in IMG/M
3300006916\|Ga0070750_10038361	All Organisms → cellular organisms → Bacteria	2361	Open in IMG/M
3300006920\|Ga0070748_1010075	All Organisms → Viruses → Predicted Viral	4114	Open in IMG/M
3300006920\|Ga0070748_1070549	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300009086\|Ga0102812_10002057	Not Available	13681	Open in IMG/M
3300009086\|Ga0102812_10276827	Not Available	913	Open in IMG/M
3300009136\|Ga0118735_10006075	Not Available	4037	Open in IMG/M
3300009428\|Ga0114915_1098774	Not Available	871	Open in IMG/M
3300009467\|Ga0115565_10513991	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	537	Open in IMG/M
3300009507\|Ga0115572_10459995	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	708	Open in IMG/M
3300009550\|Ga0115013_10025435	All Organisms → Viruses → Predicted Viral	3171	Open in IMG/M
3300010153\|Ga0098059_1312362	Not Available	600	Open in IMG/M
3300010430\|Ga0118733_107792775	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	555	Open in IMG/M
3300011118\|Ga0114922_10137030	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2082	Open in IMG/M
3300011118\|Ga0114922_10252540	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	1478	Open in IMG/M
3300011126\|Ga0151654_1025146	Not Available	1639	Open in IMG/M
3300012952\|Ga0163180_10666409	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	799	Open in IMG/M
3300017697\|Ga0180120_10068540	All Organisms → Viruses → Predicted Viral	1576	Open in IMG/M
3300017708\|Ga0181369_1000585	Not Available	10250	Open in IMG/M
3300017714\|Ga0181412_1004309	All Organisms → Viruses → Predicted Viral	4814	Open in IMG/M
3300017720\|Ga0181383_1116587	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	717	Open in IMG/M
3300017726\|Ga0181381_1064920	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	788	Open in IMG/M
3300017732\|Ga0181415_1010289	Not Available	2230	Open in IMG/M
3300017738\|Ga0181428_1023288	All Organisms → Viruses → Predicted Viral	1434	Open in IMG/M
3300017756\|Ga0181382_1006299	All Organisms → Viruses → Predicted Viral	4352	Open in IMG/M
3300017768\|Ga0187220_1237859	Not Available	546	Open in IMG/M
3300017769\|Ga0187221_1117375	Not Available	804	Open in IMG/M
3300017782\|Ga0181380_1003680	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	6336	Open in IMG/M
3300019077\|Ga0188868_1000108	All Organisms → Viruses → Predicted Viral	2354	Open in IMG/M
3300019751\|Ga0194029_1054450	Not Available	663	Open in IMG/M
3300019756\|Ga0194023_1062066	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	751	Open in IMG/M
3300020385\|Ga0211677_10007963	Not Available	6099	Open in IMG/M
3300020420\|Ga0211580_10390098	Not Available	568	Open in IMG/M
3300020450\|Ga0211641_10151815	Not Available	1169	Open in IMG/M
3300021085\|Ga0206677_10027873	Not Available	3234	Open in IMG/M
3300021185\|Ga0206682_10052584	Not Available	2213	Open in IMG/M
3300021347\|Ga0213862_10064442	All Organisms → Viruses → Predicted Viral	1299	Open in IMG/M
3300021364\|Ga0213859_10112211	Not Available	1291	Open in IMG/M
3300021373\|Ga0213865_10000075	Not Available	58833	Open in IMG/M
3300021373\|Ga0213865_10023074	All Organisms → Viruses → Predicted Viral	3513	Open in IMG/M
3300021375\|Ga0213869_10000824	Not Available	24212	Open in IMG/M
3300022074\|Ga0224906_1134856	Not Available	706	Open in IMG/M
(restricted) 3300023112\|Ga0233411_10131031	Not Available	812	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10004958	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	5857	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10005783	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	5331	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10382110	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	629	Open in IMG/M
(restricted) 3300024062\|Ga0255039_10554671	Not Available	503	Open in IMG/M
3300024433\|Ga0209986_10319595	Not Available	729	Open in IMG/M
(restricted) 3300024519\|Ga0255046_10000863	Not Available	8424	Open in IMG/M
3300025026\|Ga0207879_101269	Not Available	2142	Open in IMG/M
3300025083\|Ga0208791_1000308	Not Available	24214	Open in IMG/M
3300025086\|Ga0208157_1001524	Not Available	10347	Open in IMG/M
3300025120\|Ga0209535_1012494	All Organisms → Viruses → Predicted Viral	4669	Open in IMG/M
3300025127\|Ga0209348_1021753	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2387	Open in IMG/M
3300025127\|Ga0209348_1053398	Not Available	1356	Open in IMG/M
3300025127\|Ga0209348_1078003	Not Available	1062	Open in IMG/M
3300025151\|Ga0209645_1017027	Not Available	2815	Open in IMG/M
3300025168\|Ga0209337_1005452	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	8677	Open in IMG/M
3300025276\|Ga0208814_1004658	Not Available	5422	Open in IMG/M
3300025276\|Ga0208814_1118885	Not Available	636	Open in IMG/M
3300025645\|Ga0208643_1123518	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	683	Open in IMG/M
3300025759\|Ga0208899_1003317	Not Available	10422	Open in IMG/M
3300025759\|Ga0208899_1035617	Not Available	2280	Open in IMG/M
3300025769\|Ga0208767_1116000	Not Available	1038	Open in IMG/M
3300025849\|Ga0209603_1000908	Not Available	33167	Open in IMG/M
3300025849\|Ga0209603_1172465	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	854	Open in IMG/M
3300025853\|Ga0208645_1026961	Not Available	3046	Open in IMG/M
3300026517\|Ga0228607_1090389	Not Available	769	Open in IMG/M
3300027506\|Ga0208973_1064621	Not Available	903	Open in IMG/M
3300027668\|Ga0209482_1000184	Not Available	54998	Open in IMG/M
3300027859\|Ga0209503_10060327	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1741	Open in IMG/M
(restricted) 3300027861\|Ga0233415_10685731	Not Available	501	Open in IMG/M
3300028008\|Ga0228674_1010330	Not Available	4312	Open in IMG/M
3300028128\|Ga0228645_1134788	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	544	Open in IMG/M
3300029293\|Ga0135211_1050433	Not Available	526	Open in IMG/M
3300029318\|Ga0185543_1028773	Not Available	1262	Open in IMG/M
3300029318\|Ga0185543_1029913	All Organisms → Viruses → Predicted Viral	1231	Open in IMG/M
3300029632\|Ga0135266_107470	Not Available	738	Open in IMG/M
3300031519\|Ga0307488_10063801	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	2796	Open in IMG/M
3300031519\|Ga0307488_10703366	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	571	Open in IMG/M
3300031569\|Ga0307489_10004421	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	9235	Open in IMG/M
3300031773\|Ga0315332_10466136	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300032373\|Ga0316204_10333525	All Organisms → Viruses → Predicted Viral	1167	Open in IMG/M
3300033742\|Ga0314858_135991	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	630	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	96.52%
Freshwater	Environmental → Aquatic → Freshwater	2.61%
Sediment	Environmental → Aquatic → Sediment	0.87%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	31.30%
Coastal	Environmental → Aquatic → Marine → Coastal	26.09%
Strait	Environmental → Aquatic → Marine → Strait	10.43%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.96%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	6.96%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.22%
Inlet	Environmental → Aquatic → Marine → Inlet	4.35%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.48%
River	Environmental → Aquatic → Freshwater → River	1.74%
Harbor	Environmental → Aquatic → Marine → Harbor	1.74%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	27.83%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	20.87%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	10.43%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.96%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	6.96%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	5.22%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.48%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	2.61%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.74%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.74%
Unclassified	Environmental → Aquatic → Marine → Harbor → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.87%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	23.48%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	10.43%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	8.70%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	6.96%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.09%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	4.35%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	4.35%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	3.48%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	2.61%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	2.61%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	2.61%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.61%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.74%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	1.74%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	1.74%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.74%
Marine Harbor	Environmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor	1.74%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.87%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.87%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.87%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.87%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	0.87%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.87%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.87%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.87%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.87%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.87%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.87%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.87%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.87%
Coastal Water And Sediment	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Coastal Water And Sediment	0.87%
Marine Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Sediment	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918005	Marine sediment microbial communities from Arctic Ocean, off the coast from Alaska - sample from high methane PC12-225-485cm	Environmental	Open in IMG/M
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300000223	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P4 10m	Environmental	Open in IMG/M
3300000928	Marine plume microbial communities from the Columbia River - 25 PSU	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300001833	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM24, ROCA_DNA012_0.2um_2l	Environmental	Open in IMG/M
3300005735	Seawater microbial communities from Vineyard Sound, MA, USA - control T0	Environmental	Open in IMG/M
3300005821	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf, PM1	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006191	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA	Environmental	Open in IMG/M
3300006467	Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009136	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 82 cmbsf	Environmental	Open in IMG/M
3300009428	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010430	Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300011126	Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, 0.02	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017726	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24	Environmental	Open in IMG/M
3300017732	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300019077	Metatranscriptome of marine microbial communities from Baltic Sea - GS695_0p8	Environmental	Open in IMG/M
3300019751	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MG	Environmental	Open in IMG/M
3300019756	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MG	Environmental	Open in IMG/M
3300020385	Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)	Environmental	Open in IMG/M
3300020420	Marine microbial communities from Tara Oceans - TARA_B100001248 (ERX556094-ERR599142)	Environmental	Open in IMG/M
3300020450	Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)	Environmental	Open in IMG/M
3300021085	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300021375	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300023112 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_2_MG	Environmental	Open in IMG/M
3300023210 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG	Environmental	Open in IMG/M
3300024062 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_1	Environmental	Open in IMG/M
3300024433	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)	Environmental	Open in IMG/M
3300024519 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27	Environmental	Open in IMG/M
3300025026	Marine viral communities from the Pacific Ocean - LP-24 (SPAdes)	Environmental	Open in IMG/M
3300025083	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025849	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300026517	Seawater microbial communities from Monterey Bay, California, United States - 8D	Environmental	Open in IMG/M
3300027506	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_66_BLW_10 (SPAdes)	Environmental	Open in IMG/M
3300027668	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)	Environmental	Open in IMG/M
3300027859	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027861 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MG	Environmental	Open in IMG/M
3300028008	Seawater microbial communities from Monterey Bay, California, United States - 1D_r	Environmental	Open in IMG/M
3300028128	Seawater microbial communities from Monterey Bay, California, United States - 57D	Environmental	Open in IMG/M
3300029293	Marine harbor viral communities from the Indian Ocean - SCH2	Environmental	Open in IMG/M
3300029318	Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289	Environmental	Open in IMG/M
3300029632	Marine harbor viral communities from the Pacific Ocean - SMB3	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031569	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2	Environmental	Open in IMG/M
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental	Open in IMG/M
3300032373	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 2	Environmental	Open in IMG/M
3300033742	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
ASHM485C_06207380	2140918005	Coastal Water And Sediment	MKEETEFEKMLKRLESQPVPERTCSINDDTCESCSG
DelMOSum2010_1000109239	3300000101	Marine	MKEKETEFEKMLRNLESKPVPERTCNIDDETCESCSG*
DelMOSpr2010_100011766	3300000116	Marine	MKEETEFEKMLKRLESQEVPERTCNIDDENCESCSG*
DelMOSpr2010_100792052	3300000116	Marine	MEEKLTEFEKMLRELENKAVPERTCNIDDENCESCSG*
DelMOSpr2010_101198402	3300000116	Marine	MEEKLTEFEKMLKELENKPVPERTCNIDDENCESCSG*
DelMOWin2010_100068833	3300000117	Marine	MEEKLTEFEKMLKELEKKPVPERTCNIDDENCESCSG*
LPjun09P410mDRAFT_10040913	3300000223	Marine	MEKKQSEFEKMLAELENKPVPERTCNIDDETCESCSG*
OpTDRAFT_103755481	3300000928	Freshwater And Marine	MTEETEFEKMLKKLQDKPVPERTCNIDDENCESCSG*
JGI20160J14292_1000021633	3300001349	Pelagic Marine	MEEKLTEFEKMLKELENKTVPERTCNIDDENCESCSG*
JGI24006J15134_1000139815	3300001450	Marine	MIEEKTEFQKMLERLESQAVPERTCSIDDETCESCSG*
JGI24006J15134_100062557	3300001450	Marine	MDNKETEFEKMLRELEKMPVPKRTCNIDDDNCESCSG*
JGI24006J15134_100476195	3300001450	Marine	MKEETEFEKMLKRLESETVPERTCSIDDENCESCSG*
JGI24003J15210_1000094025	3300001460	Marine	MEKKQSEFEKMLEQLENKPVPERTCNIDDETCESCSG*
JGI24005J15628_100029586	3300001589	Marine	MXEEKTEFXKMLERLESQAVPERTCSIDDETCESCSG*
ACM24_10012836	3300001833	Marine Plankton	MIEKKTEFEKMLERFEKEPVPERTCNIDDETCESCSG*
Ga0076923_1462922	3300005735	Marine	MTEEKTEFEKMLERLEKETVPERTCSIDDDNCESCSG*
Ga0078746_10088684	3300005821	Marine Sediment	MIEETEFEKMLKKLQDKPVPERTCNIDDENCESCSG*
Ga0078893_1044842037	3300005837	Marine Surface Water	MDKKETEFDKMLRELAKKEVPERQCSIDDEDCESCGA*
Ga0075447_100652244	3300006191	Marine	MKEDTEFEKMLKKLQDKPVPERTCNIDDENCESCSG*
Ga0099972_101663311	3300006467	Marine	MENKETEFEKMLRELEKMPVPERTCNIDDDNCESCSG*
Ga0099972_128868332	3300006467	Marine	MEEKLTEFEKMLKELENKEVPERTCNIDDENCESCSG*
Ga0098038_100079013	3300006735	Marine	MIEEKTEFEKMLEKLENKPVPERTCDINDETCESCSG*
Ga0098037_10011262	3300006737	Marine	MKNKETEFEKMLRELEKMPVPERTCNIDDDNCESCSG*
Ga0098037_10829863	3300006737	Marine	MIEEKTEFQKMLEKLENKPVPERTCDIHDETCESCSG*
Ga0098037_11127022	3300006737	Marine	MKEETEFEKMLKRLESQTVPERTCSIDDENCESCSG*
Ga0098037_12514012	3300006737	Marine	MIEEKSEFEKMLERLEKETVPERTCSIGDDNCESCSG*
Ga0098048_10005047	3300006752	Marine	MEEKLTEFEKMLKNLENKPVPERTCNIDDENCESCSG*
Ga0098048_10025789	3300006752	Marine	MIEEKSEFQKMLEKLENQPVPERTCSIDDENCESCSG*
Ga0098048_10446042	3300006752	Marine	MEEKLTEFEKMLKELENKAVPERTCNIDDENCESCSG*
Ga0098054_10018506	3300006789	Marine	MIEEKSEFQKMLEKLEKQPVPERTCSIDDENCESCSG*
Ga0070750_100016196	3300006916	Aqueous	MTEEKTEFEKMLEKLEKQPVPERTCSIDDENCESCSG*
Ga0070750_100162379	3300006916	Aqueous	MIEEKSEFEKMLERLEKQTVPERTCSIDDENCESCSG*
Ga0070750_100383612	3300006916	Aqueous	MQKKESEFDKMLRDLENKPVPERTCNIDDETCESCSG*
Ga0070748_10100752	3300006920	Aqueous	MDNKETEFEKMLRELEKMPVPERTCDIDDDNCESCSG*
Ga0070748_10705494	3300006920	Aqueous	MTEEKTEFQKMLEKLEKQPVPERTCSIDDENCESCSG*
Ga0102812_100020573	3300009086	Estuarine	MEKKQSEFEKMLAELENKPVPERTCNIDDETCKSCSG*
Ga0102812_102768274	3300009086	Estuarine	MIEEKSEFEKMLEKLEKQPVPERTCSIDDENCESCSG*
Ga0118735_100060756	3300009136	Marine Sediment	MTEEKTEFQKMLERLESQTVPERTCSIDDETCESCSG*
Ga0114915_10987742	3300009428	Deep Ocean	MKEETEFEKMLKRLESQAVPERTCSIDDENCESCSG*
Ga0115565_105139912	3300009467	Pelagic Marine	MEEKLTEFEKMLRELENKAVPDRTCNIDDENCESCSG*
Ga0115572_104599952	3300009507	Pelagic Marine	MEKKESEFDKMLRDLENKPVPERTCNIDDETCESCSG*
Ga0115013_100254353	3300009550	Marine	MEEKLTEFEKMLKELESKPVPERTCNIDDENCESCSG*
Ga0098059_13123622	3300010153	Marine	MIEEKSEFEKMLEKLEKEPVPARTCSIDDENCESCSG*
Ga0118733_1077927752	3300010430	Marine Sediment	KLTEFEKMLKELEKKPVPERTCNIDDENCESCSG*
Ga0114922_101370304	3300011118	Deep Subsurface	RGFIFRKMTEEKTEFEKMLERLEKETVPERTCSIDDDNCESCSG*
Ga0114922_102525403	3300011118	Deep Subsurface	MEKKQSEFEKMLEQLENKPVPERTCNIDDENCESCSG*
Ga0151654_10251462	3300011126	Marine	MIEEKSEFVIMLEMLESQPVPERTCSIDDENCESCSG*
Ga0163180_106664092	3300012952	Seawater	MEEKLTEFEKMLKELENKPVPQRTCNIDDENCESCSG*
Ga0180120_100685402	3300017697	Freshwater To Marine Saline Gradient	MEKKETEFDKMLRELEKMPVPERTCNIDDDNCESCSG
Ga0181369_10005857	3300017708	Marine	MIEEKTEFEKMLERLEKQTVPERTCSIDDENCESCSG
Ga0181412_10043093	3300017714	Seawater	MENKETEFEKMLRELEKMPVPERTCSIDDENCESCSG
Ga0181383_11165872	3300017720	Seawater	MEEKLTEFEKMLKELENKTVPQRTCNIDDENCESCSG
Ga0181381_10649202	3300017726	Seawater	MEEKLTEFEKMLKELENKPVPQRTCNIDDENCESCSG
Ga0181415_10102892	3300017732	Seawater	MIEEKTEFEKMLEKLEKKPVPERTCDIHDETCESCSG
Ga0181428_10232883	3300017738	Seawater	LTYLSKEKKSEFEKLLEELEKKKVPARQCNIDDNTCESCSG
Ga0181382_10062994	3300017756	Seawater	MEEKLTEFEKMLKELENKAVPKRTCNIDDENCESCSG
Ga0187220_12378591	3300017768	Seawater	KKDKSEFEKLLEEAEKKKVPVRQCNIEDTTCESCSG
Ga0187221_11173751	3300017769	Seawater	IYRRFIFRKMIEEKTEFQKMLERLESQSVPERTCSIDDETCESCSG
Ga0181380_10036803	3300017782	Seawater	MEEKLTEFEKMLKELENKTVPERTCNIDHENCESCSG
Ga0188868_10001083	3300019077	Freshwater Lake	MEEKLTEFEKMLRELENKVVPERTCNIDDENCESCSG
Ga0194029_10544502	3300019751	Freshwater	MIEEKSEFEKMLEKLEKEPVPERTCSIDDENCESCSG
Ga0194023_10620661	3300019756	Freshwater	MEEKLTEFEKMLRELENKAVPERTCNIDDENCESC
Ga0211677_100079637	3300020385	Marine	MIEEKSEFQKMLEKLEKQPVPERTCSIDDENCESCSG
Ga0211580_103900982	3300020420	Marine	YKSFIFTQMIEEKTEFQKMLEKLEKEPVPERTCNIDDETCESCSG
Ga0211641_101518154	3300020450	Marine	MIEEKTEFQKMLEKLENKPVPERTCNIHDETCESCSG
Ga0206677_100278734	3300021085	Seawater	MIEEKSEFEKMLEKLEKQPVPERTCSIDDENCESCSG
Ga0206682_100525844	3300021185	Seawater	MKEETEFEKMLKRLESQTVPERTCSIDDENCESCSG
Ga0213862_100644422	3300021347	Seawater	MKEKLTEFEKMLKELENKTVPERTCNIDDENCESCSG
Ga0213859_101122112	3300021364	Seawater	MTEKKTEFEKMLEKLEKEPVPERTCSIDDENCESCSG
Ga0213865_1000007558	3300021373	Seawater	MIEKKSEFEKMLEKLEKQTVPERTCSIDDENCESCSG
Ga0213865_100230742	3300021373	Seawater	MEEKLTEFEKMLKELENKAVPERTCNIDDENCESCSG
Ga0213869_1000082417	3300021375	Seawater	MKEETEFEKMLKRLESQEVPERTCNIDDENCESCSG
Ga0224906_11348561	3300022074	Seawater	IYRRFIFRKMIEEKTEFQKMLERLESQAVPERTCSIDDETCESCSG
(restricted) Ga0233411_101310312	3300023112	Seawater	MEKKQSEFEKMLAELENKPVPERTCNIDDETCESCSG
(restricted) Ga0233412_100049583	3300023210	Seawater	MEEKLTEFEKMLRELENKAVPERTCNIDDENCESCSG
(restricted) Ga0233412_100057832	3300023210	Seawater	MKEKETEFEKMLRNLESKPVPERTCNIDDETCESCSG
(restricted) Ga0233412_103821102	3300023210	Seawater	MENKETEFEKMLRELEKMPVPERTCNIDDDNCESCSG
(restricted) Ga0255039_105546712	3300024062	Seawater	MKEETEFEKMLKRLESETVPERTCSIDDENCESCSG
Ga0209986_103195953	3300024433	Deep Subsurface	MIEEKSEFEKMLERLEKETVPERTCSIGDDNCESCSG
(restricted) Ga0255046_100008636	3300024519	Seawater	MIEETEFEKMLKKLQDKPVPERTCNIDDENCESCSG
Ga0207879_1012695	3300025026	Marine	MIEEKTEFQKMLERLESQAVPERTCSIDDETCESCSG
Ga0208791_100030821	3300025083	Marine	MIEEKSEFQKMLEKLENQPVPERTCSIDDENCESCSG
Ga0208157_10015246	3300025086	Marine	MIEEKTEFEKMLEKLENKPVPERTCDINDETCESCSG
Ga0209535_10124942	3300025120	Marine	MEKKQSEFEKMLEQLENKPVPERTCNIDDETCESCSG
Ga0209348_10217534	3300025127	Marine	MIEEKTEFQKMLEKLENKPVPERTCDIHDETCESCSG
Ga0209348_10533982	3300025127	Marine	MIEEKTEFQKMLEKLEKEPVPERTCNIDDETCESCSG
Ga0209348_10780033	3300025127	Marine	MIEKKSEFEKMLEKLEKEPVPERTCNIDDENCESCSG
Ga0209645_10170272	3300025151	Marine	MTEEKTEFEKMLEKLEKTPVPERTCDIHDETCESCSG
Ga0209337_10054524	3300025168	Marine	MDNKETEFEKMLRELEKMPVPERTCNIDDDNCESCSG
Ga0208814_10046586	3300025276	Deep Ocean	MKEETEFEKMLKKLQDKPVPERTCNIDDENCESCSG
Ga0208814_11188852	3300025276	Deep Ocean	MKEETEFEKMLKRLESQAVPERTCSIDDENCESCSG
Ga0208643_11235182	3300025645	Aqueous	MDNKETEFEKMLRELEKMPVPERTCDIDDDNCESCSG
Ga0208899_100331711	3300025759	Aqueous	MTEEKTEFEKMLEKLEKQPVPERTCSIDDENCESCSG
Ga0208899_10356172	3300025759	Aqueous	MQKKESEFDKMLRDLENKPVPERTCNIDDETCESCSG
Ga0208767_11160003	3300025769	Aqueous	MIEEKSEFEKMLERLEKQTVPERTCSIDDENCESCSG
Ga0209603_100090819	3300025849	Pelagic Marine	MEEKLTEFEKMLKELENKPVPERTCNIDDENCESCSG
Ga0209603_11724652	3300025849	Pelagic Marine	MEKKESEFDKMLRDLENKPVPERTCNIDDETCESCSG
Ga0208645_10269615	3300025853	Aqueous	MTEEKTEFEKMLERLEKETVPERTCSIDDDNCESCSG
Ga0228607_10903892	3300026517	Seawater	MEKKQSEFEKMLEQLENKPVPERTCNIDDETCESCSGXKNLKIQN
Ga0208973_10646212	3300027506	Marine	MEKKQSEFEKMLAELENKPVPERTCNIDDETCESCSGXKNLKIQN
Ga0209482_100018447	3300027668	Marine	MKEDTEFEKMLKKLQDKPVPERTCNIDDENCESCSG
Ga0209503_100603272	3300027859	Marine	MEEKLTEFEKMLKELESKPVPERTCNIDDENCESCSG
(restricted) Ga0233415_106857311	3300027861	Seawater	FRKMIEETEFEKMLKKLQDKPVPERTCNIDDENCESCSG
Ga0228674_10103305	3300028008	Seawater	MIEEKSEFEKMLEKLEKEPVPARTCSIDDENCESCSG
Ga0228645_11347882	3300028128	Seawater	MEKKETEFEKMLRELEKMPVPERTCNIDDDNCESCSG
Ga0135211_10504332	3300029293	Marine Harbor	MEEKSEFEKMLEKLEKKPVPERTCNIDDENCESCSG
Ga0185543_10287732	3300029318	Marine	MIKEKTEFEKMLEKLEKTPVPERTCDIHDETCESCSG
Ga0185543_10299132	3300029318	Marine	MENKETEFEKMLRELEKMPVPKRTCNIDDDNCESCSG
Ga0135266_1074703	3300029632	Marine Harbor	MTEETEFEKMLKKLQDKPVPERTCNIDDENCESCSG
Ga0307488_100638012	3300031519	Sackhole Brine	MKEIETEFEKMLRNLESKPVPERTCNIDDDNCESCSG
Ga0307488_107033661	3300031519	Sackhole Brine	MKDKETEFEKMLRNLESKPVPERTCNIDDETCESCSG
Ga0307489_1000442110	3300031569	Sackhole Brine	MKDKETEFEKMLKNLESIPVPERTCNIDDNNCESCSG
Ga0315332_104661363	3300031773	Seawater	YLSKTKKTEFEKLLEELEKKPVPVRQCNIDDNNCESCSG
Ga0316204_103335252	3300032373	Microbial Mat	MKNKETEFEKMLRELEKMPVPERTCNIDEDNCESCSG
Ga0314858_135991_295_408	3300033742	Sea-Ice Brine	MEEKLTEFEKMLKELENKPIPERTCNIDDDNCESCSG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters