Metagenome / Metatranscriptome Family F080133

Basic Information
Family ID	F080133
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	40 residues
Representative Sequence	TVTVTHWLGKHRSAMLPAGTELVMELSRPMTMTAASSGQ
Number of Associated Samples	103
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.88 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	86.09 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Most Common Taxonomy
Group	Bacteria (88.696 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (11.304 % of family members)
Environment Ontology (ENVO)	Unclassified (26.957 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.043 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.43% β-sheet: 0.00% Coil/Unstructured: 86.57%
Feature Viewer

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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF03065	Glyco_hydro_57	21.74
PF07238	PilZ	6.96
PF12787	EcsC	1.74
PF01436	NHL	1.74
PF04519	Bactofilin	0.87
PF03781	FGE-sulfatase	0.87
PF02922	CBM_48	0.87
PF01478	Peptidase_A24	0.87
PF13353	Fer4_12	0.87
PF00326	Peptidase_S9	0.87
PF01513	NAD_kinase	0.87
PF08281	Sigma70_r4_2	0.87
PF00583	Acetyltransf_1	0.87
PF13650	Asp_protease_2	0.87
PF13847	Methyltransf_31	0.87
PF13305	TetR_C_33	0.87
PF00551	Formyl_trans_N	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.87
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.70 %
Unclassified	root	N/A	11.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.70 %
Unclassified	root	N/A	11.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.70 %
Unclassified	root	N/A	11.30 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	79.13 %
Unclassified	root	N/A	11.30 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	33.91 %
Unclassified	root	N/A	11.30 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.91 %
Unclassified	root	N/A	11.30 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.35 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.61 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.91 %
Unclassified	root	N/A	11.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.35 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	2.61 %
Chloroflexi bacterium 13_1_20CM_2_59_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	0.87 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.91 %
Unclassified	root	N/A	11.30 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	2.61 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Chloroflexi bacterium 13_1_20CM_2_59_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.91 %
Unclassified	root	N/A	11.30 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	2.61 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	1.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Chloroflexi bacterium 13_1_20CM_2_59_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.91 %
Unclassified	root	N/A	11.30 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	2.61 %
Granulicella sp. WH15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. WH15	1.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Chloroflexi bacterium 13_1_20CM_2_59_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000953\|JGI11615J12901_10275546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1763	Open in IMG/M
3300001661\|JGI12053J15887_10630878	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	509	Open in IMG/M
3300002245\|JGIcombinedJ26739_101490191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	571	Open in IMG/M
3300002560\|JGI25383J37093_10016983	All Organisms → cellular organisms → Bacteria	2422	Open in IMG/M
3300004092\|Ga0062389_100761135	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1146	Open in IMG/M
3300005332\|Ga0066388_103049375	All Organisms → cellular organisms → Bacteria → Acidobacteria	856	Open in IMG/M
3300005338\|Ga0068868_101272604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300005354\|Ga0070675_100121358	All Organisms → cellular organisms → Bacteria → Acidobacteria	2221	Open in IMG/M
3300005531\|Ga0070738_10004133	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17886	Open in IMG/M
3300005542\|Ga0070732_10620568	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300005559\|Ga0066700_11105314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300005561\|Ga0066699_10846116	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300005591\|Ga0070761_10214235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1144	Open in IMG/M
3300005895\|Ga0075277_1052596	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	633	Open in IMG/M
3300006162\|Ga0075030_100078802	All Organisms → cellular organisms → Bacteria → Acidobacteria	2705	Open in IMG/M
3300006354\|Ga0075021_10252279	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1086	Open in IMG/M
3300006800\|Ga0066660_10275891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1329	Open in IMG/M
3300006914\|Ga0075436_100430135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300009089\|Ga0099828_10140846	All Organisms → cellular organisms → Bacteria → Acidobacteria	2124	Open in IMG/M
3300009098\|Ga0105245_11046113	All Organisms → cellular organisms → Bacteria → Acidobacteria	862	Open in IMG/M
3300009518\|Ga0116128_1073315	All Organisms → cellular organisms → Bacteria → Acidobacteria	1042	Open in IMG/M
3300009522\|Ga0116218_1434900	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300009525\|Ga0116220_10513970	Not Available	544	Open in IMG/M
3300009630\|Ga0116114_1027824	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. WH15	1670	Open in IMG/M
3300009643\|Ga0116110_1043858	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. WH15	1626	Open in IMG/M
3300009645\|Ga0116106_1052113	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300009839\|Ga0116223_10646611	Not Available	609	Open in IMG/M
3300010048\|Ga0126373_10681567	All Organisms → cellular organisms → Bacteria → Acidobacteria	1085	Open in IMG/M
3300010303\|Ga0134082_10308307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300010337\|Ga0134062_10131805	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300010358\|Ga0126370_11388702	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300010360\|Ga0126372_10193551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1684	Open in IMG/M
3300010379\|Ga0136449_103184280	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300010391\|Ga0136847_11437673	Not Available	503	Open in IMG/M
3300010400\|Ga0134122_10195151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1676	Open in IMG/M
3300011271\|Ga0137393_10177866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1788	Open in IMG/M
3300012189\|Ga0137388_10166373	All Organisms → cellular organisms → Bacteria	1966	Open in IMG/M
3300012189\|Ga0137388_10399204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1273	Open in IMG/M
3300012349\|Ga0137387_10873008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300012361\|Ga0137360_11292076	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300012582\|Ga0137358_11082813	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300012683\|Ga0137398_10741822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300012685\|Ga0137397_10931363	Not Available	643	Open in IMG/M
3300012685\|Ga0137397_11336346	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	507	Open in IMG/M
3300012930\|Ga0137407_10581038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1051	Open in IMG/M
3300012931\|Ga0153915_11024817	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300012988\|Ga0164306_11962129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300014159\|Ga0181530_10652451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300014325\|Ga0163163_10114935	All Organisms → cellular organisms → Bacteria	2723	Open in IMG/M
3300015373\|Ga0132257_102335233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300016422\|Ga0182039_10145988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1825	Open in IMG/M
3300017938\|Ga0187854_10100361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1358	Open in IMG/M
3300017938\|Ga0187854_10139198	All Organisms → cellular organisms → Bacteria → Acidobacteria	1109	Open in IMG/M
3300017940\|Ga0187853_10172467	All Organisms → cellular organisms → Bacteria → Acidobacteria	1025	Open in IMG/M
3300017943\|Ga0187819_10135494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1468	Open in IMG/M
3300017966\|Ga0187776_10985873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300017966\|Ga0187776_11373378	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300017970\|Ga0187783_10018056	All Organisms → cellular organisms → Bacteria	5213	Open in IMG/M
3300017975\|Ga0187782_10112746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2006	Open in IMG/M
3300017975\|Ga0187782_10339124	All Organisms → cellular organisms → Bacteria → Acidobacteria	1137	Open in IMG/M
3300018009\|Ga0187884_10042078	All Organisms → cellular organisms → Bacteria → Acidobacteria	2184	Open in IMG/M
3300018019\|Ga0187874_10395308	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300018034\|Ga0187863_10096496	All Organisms → cellular organisms → Bacteria → Acidobacteria	1658	Open in IMG/M
3300018038\|Ga0187855_10134009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1483	Open in IMG/M
3300018042\|Ga0187871_10087191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1812	Open in IMG/M
3300018042\|Ga0187871_10639090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	591	Open in IMG/M
3300018044\|Ga0187890_10317596	Not Available	874	Open in IMG/M
3300018060\|Ga0187765_10812556	Not Available	625	Open in IMG/M
3300018085\|Ga0187772_10189056	Not Available	1379	Open in IMG/M
3300018090\|Ga0187770_11577672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300018412\|Ga0194136_1244725	Not Available	655	Open in IMG/M
3300018482\|Ga0066669_11547499	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300019787\|Ga0182031_1068414	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300020580\|Ga0210403_11381261	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300020581\|Ga0210399_10045857	All Organisms → cellular organisms → Bacteria → Acidobacteria	3506	Open in IMG/M
3300020581\|Ga0210399_10240941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1507	Open in IMG/M
3300021180\|Ga0210396_10891769	Not Available	759	Open in IMG/M
3300021420\|Ga0210394_11112710	Not Available	681	Open in IMG/M
3300021477\|Ga0210398_11018573	Not Available	660	Open in IMG/M
3300021478\|Ga0210402_11918217	Not Available	518	Open in IMG/M
3300021478\|Ga0210402_11963202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	511	Open in IMG/M
3300021479\|Ga0210410_10621898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	958	Open in IMG/M
3300021560\|Ga0126371_10031685	All Organisms → cellular organisms → Bacteria	4955	Open in IMG/M
3300022521\|Ga0224541_1015575	All Organisms → cellular organisms → Bacteria → Acidobacteria	818	Open in IMG/M
3300025507\|Ga0208188_1132838	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300025553\|Ga0208080_1092121	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300025922\|Ga0207646_10919869	All Organisms → cellular organisms → Bacteria → Acidobacteria	775	Open in IMG/M
3300025988\|Ga0208141_1020342	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300026078\|Ga0207702_10209095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1813	Open in IMG/M
3300026078\|Ga0207702_12432675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300027545\|Ga0209008_1115484	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300027692\|Ga0209530_1025525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1774	Open in IMG/M
3300027853\|Ga0209274_10112436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1351	Open in IMG/M
3300027853\|Ga0209274_10500721	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300027875\|Ga0209283_10083112	All Organisms → cellular organisms → Bacteria → Acidobacteria	2077	Open in IMG/M
3300027911\|Ga0209698_10083322	All Organisms → cellular organisms → Bacteria → Acidobacteria	2708	Open in IMG/M
3300028047\|Ga0209526_10336724	All Organisms → cellular organisms → Bacteria → Acidobacteria	1014	Open in IMG/M
3300028562\|Ga0302151_10044053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1614	Open in IMG/M
3300028572\|Ga0302152_10125314	All Organisms → cellular organisms → Bacteria → Acidobacteria	815	Open in IMG/M
3300028650\|Ga0302170_10114432	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300028748\|Ga0302156_10136529	All Organisms → cellular organisms → Bacteria → Acidobacteria	1205	Open in IMG/M
3300029636\|Ga0222749_10487643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300030524\|Ga0311357_10371362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1356	Open in IMG/M
3300030524\|Ga0311357_10481767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1158	Open in IMG/M
3300031708\|Ga0310686_119253950	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300031718\|Ga0307474_10192308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1551	Open in IMG/M
3300031912\|Ga0306921_11185248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300031947\|Ga0310909_11266374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300032261\|Ga0306920_102266905	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300032892\|Ga0335081_10174835	All Organisms → cellular organisms → Bacteria → Acidobacteria	3020	Open in IMG/M
3300033134\|Ga0335073_10121982	All Organisms → cellular organisms → Bacteria	3339	Open in IMG/M
3300033158\|Ga0335077_10705927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1038	Open in IMG/M
3300033433\|Ga0326726_11472010	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300033808\|Ga0314867_047731	All Organisms → cellular organisms → Bacteria → Acidobacteria	1003	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.04%
Host-Associated	Host-Associated	6.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.17%
Aquatic	Environmental → Aquatic	20.87%
Plants	Host-Associated → Plants	6.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.22%
Freshwater	Environmental → Aquatic → Freshwater	18.26%
Peat	Environmental → Terrestrial → Peat	6.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.48%
Sediment	Environmental → Aquatic → Sediment	2.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.61%
Roots	Host-Associated → Plants → Roots	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.04%
Loam	Environmental → Terrestrial → Soil → Loam	8.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.74%
Lake	Environmental → Aquatic → Freshwater → Lake	0.87%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.04%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.74%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.87%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.87%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.70%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.48%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.48%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.61%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.74%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.74%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.87%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.87%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.87%
Watersheds	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Watersheds	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.87%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.87%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.87%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.87%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018412	Freshwater microbial communities from Pennsylvania, USA, analyzing microbe dynamics in response to fracking - TARM_MetaG_T3A_14	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300025553	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025988	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028650	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_1	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080133

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11615J12901_102755462	3300000953	Soil	GGTIGVTATVAHWLGKRRSAALPSGTELLLELNRPLELGAATTGQ*
JGI12053J15887_106308782	3300001661	Forest Soil	VGGLVGATATVSHWLGKHRSATLPAGTELTLELDRPLMMSSPGVGQ*
JGIcombinedJ26739_1014901911	3300002245	Forest Soil	ATATVSHWLGKHRSATLPAGTELTLELDRPLMMSSPSVGQ*
JGI25383J37093_100169833	3300002560	Grasslands Soil	IGATATVAHWLGKRRSAMLPAGTELTMELSRPLAMTAASGGQ*
Ga0062389_1007611353	3300004092	Bog Forest Soil	GGAVGATITVTHWLSKHRSAMLPAGTELVMELSRPLTMTATSAAGGQ*
Ga0066388_1030493752	3300005332	Tropical Forest Soil	ASTHWLVQRRSAVLRSGTQLMMELSRPMTMSTTAAGAGQ*
Ga0068868_1012726043	3300005338	Miscanthus Rhizosphere	TIGVTATVAHWLGKRRSAALPSGTELLLELNRPLELGAATTGQ*
Ga0070675_1001213582	3300005354	Miscanthus Rhizosphere	VGATLTVAHWLGKKRSAVLPSGTELMMELSRPLAMTAETGGQ*
Ga0070738_100041331	3300005531	Surface Soil	VGATVTTAHWLMKHNSAYLPAGTELVMELDRPLEMAPASGGQ*
Ga0070732_106205681	3300005542	Surface Soil	AHWLGKKNSAMLPAGTELVMELSRPLAMTAANGGQ*
Ga0066700_111053141	3300005559	Soil	VAHWLGKRRSAVLPAGTELVMELSRPMAMTAAGGGGQ*
Ga0066699_108461161	3300005561	Soil	HWLSKHRSAMLPAGTELVMELSRPMALTAASAGQ*
Ga0070761_102142352	3300005591	Soil	GLVGATVTVTHWLSKHRSAMLPAGTELVMELNRPMTMTTAIASSGQ*
Ga0075277_10525962	3300005895	Rice Paddy Soil	VLIGGAIGATATITHWLARHRSAMIPAGTELVMELNRPVTLNAAASGGK*
Ga0075030_1000788021	3300006162	Watersheds	VAHWLGKHRSAMLPAGTELVMELSRPMTMTWANSGQ*
Ga0075021_102522792	3300006354	Watersheds	GGIGATLTVAHWLGKKRSAVLPSGTELMMELSRPLAMTAETAGQ*
Ga0066660_102758911	3300006800	Soil	TVAHWLGKHRSAMLPAGTELVMELNRPMTMTVASGGQ*
Ga0075436_1004301352	3300006914	Populus Rhizosphere	TVAHWLGKKRSAVLPSGTELMMELSRPLAMTAETGGQ*
Ga0099828_101408461	3300009089	Vadose Zone Soil	TVAHWLSKHRSAMLPAGTELVMELSRPMALTAASSGQ*
Ga0105245_110461131	3300009098	Miscanthus Rhizosphere	GAGATTTRWLVKHRSAVIPAGTELMMELSRPMEMGTTPSGQ*
Ga0116128_10733152	3300009518	Peatland	TVTVTHWLGKHRSAMLPAGTELVMELSRPMTMTAASSGQ*
Ga0116218_14349002	3300009522	Peatlands Soil	VTVTHWLAKHRSAMLPAGTELVMELNRPMTMTSASSGQ*
Ga0116220_105139701	3300009525	Peatlands Soil	SIAATGTFVHWLTKRKSAVLPKGTELVMELNRPMAMTAASGGE*
Ga0116114_10278241	3300009630	Peatland	TVTHWLGKHRSAMLPAGTELVMELSRPMTMTVAVASSGQ*
Ga0116110_10438581	3300009643	Peatland	ATVTVTHWLGKHRSAMLPAGTELVMELSRPMTMTVAVASSGQ*
Ga0116106_10521133	3300009645	Peatland	VTHWLGKHRSAMLPAGTELVMELSRPMTMTVAVASSGQ*
Ga0116223_106466112	3300009839	Peatlands Soil	TFVHWLTKRKSAVLPKGTELVMELNRPMAMTAASGGE*
Ga0126373_106815672	3300010048	Tropical Forest Soil	VIGATATVTHWLSKHRSAMLPAGTELVMELSRLMVMTTAD*
Ga0134082_103083071	3300010303	Grasslands Soil	GATLTVAHWLGKRRSAMLPAGTELTMEFSRPLAMTATSGGQ*
Ga0134062_101318052	3300010337	Grasslands Soil	HWLGKKRSAMLPAGTELLMELSRPLSMDVVKGGQ*
Ga0126370_113887022	3300010358	Tropical Forest Soil	GATATVTHWLSKHRSAMLPAGTELVMELSRPMVMTAPAGQ*
Ga0126372_101935512	3300010360	Tropical Forest Soil	TATLAHWLGKHRSAVLPAGTELVMEISHPMTLSAATTGR*
Ga0136449_1031842802	3300010379	Peatlands Soil	FLIGGAVGATVTVTHWLAKHRSAMLPAGTELVMELNRPMTMTSASSGQ*
Ga0136847_114376732	3300010391	Freshwater Sediment	TVAHWLSKHKSAELPAGSEIVMELNRPMSLSASSSGK*
Ga0134122_101951512	3300010400	Terrestrial Soil	GAVGATLTVAHWLGKKRSAVLPSGTELMMELSRPLAMTAETGGQ*
Ga0137393_101778661	3300011271	Vadose Zone Soil	AIGATATVAHWLGKHRSAMLPAGTELVMELNRPMTMTGASGGQ*
Ga0137388_101663731	3300012189	Vadose Zone Soil	ATVTVAHWLGKHRSAMLPAGTELVMELNRPMTMTGASSGQ*
Ga0137388_103992041	3300012189	Vadose Zone Soil	TVAHWLAKHRSAMLPAGTVLEMELSRPMALTAASAGQ*
Ga0137387_108730081	3300012349	Vadose Zone Soil	TVAHWLGKRRSAVLPAGTELVMELSRPMAMTAAGGGGR*
Ga0137360_112920761	3300012361	Vadose Zone Soil	IGGAIGATATVAHWLGKHRSAMLPAGTELVMELNRPMTMTMTVASGGQ*
Ga0137358_100453504	3300012582	Vadose Zone Soil	LIGGAIGATATVAHWLGKHRSAMLPAGTELVMELNRPMTMTGTSGGQ*
Ga0137358_110828132	3300012582	Vadose Zone Soil	LIGGAIGATATVAHWLGKHRSAMLPAGTELVMELNRPMTMTMTVASGGQ*
Ga0137398_107418221	3300012683	Vadose Zone Soil	HWLGKKRSAVLPSGTELMMELSRPLAMTAESGGQ*
Ga0137397_109313631	3300012685	Vadose Zone Soil	TIHWLTKHHSAILPAGTELVMELSRPMEMSAAVSNGE*
Ga0137397_113363461	3300012685	Vadose Zone Soil	GATATIAHWLSKHKSAMIPAGTELVMELSRPMTLSAAGAGK*
Ga0137407_105810381	3300012930	Vadose Zone Soil	TLTVAHWLGKRRSAVLPSGTELMMELSRPLEMTPEAGGQ*
Ga0153915_110248171	3300012931	Freshwater Wetlands	TVAHWLTKRHEAELPAGSEITMELSRPMAMTGAGK*
Ga0164306_119621291	3300012988	Soil	GGVGATLTVAHWLGKKRGAVLPSGTELTMELSRPLAMTADTGGQ*
Ga0181530_106524512	3300014159	Bog	HWLGKHRSAMLPAGTELVMELSRPMTMTVAVASSGQ*
Ga0163163_101149353	3300014325	Switchgrass Rhizosphere	HWLTKRRTAMLPPGTELVMELNRPMTLSSASSGQ*
Ga0132257_1023352331	3300015373	Arabidopsis Rhizosphere	LTVAHWLGKKRSAVLPSGTELTMELSRPLAMTAESGGQ*
Ga0182039_101459882	3300016422	Soil	IGGAIGASATVVHWMSKKKYASLPAGTELTMELSRPLEMKQASAGK
Ga0187854_101003612	3300017938	Peatland	TVTVTHWLGKHRSAMLPAGTELVMELSRPMTMTSAVASSGQ
Ga0187854_101391982	3300017938	Peatland	WLGKHRSAMLPAGTELVMELSRPMTMNVVVASSGQ
Ga0187853_101724672	3300017940	Peatland	ATVTVTHWLGKHRSAMLPAGTEIVMELSRPMTMTVAVASSGQ
Ga0187819_101354941	3300017943	Freshwater Sediment	THWLGKHRSAMLPAGTELVMELSRPMTMTVVVASSGQ
Ga0187776_109858732	3300017966	Tropical Peatland	AHWLGKHRSAEIPAGTELMLELSRPLAMTAAAAGQ
Ga0187776_113733782	3300017966	Tropical Peatland	AHWLGKHRSATLPAGTELVMELSRPMTMSAAGGGK
Ga0187783_100180561	3300017970	Tropical Peatland	TITVAHWLGKHRSATLPAGTELVMELNRPLTMTSPAAGQ
Ga0187782_101127462	3300017975	Tropical Peatland	TATVAHWLSKHNSAMLPAGTELDMELSRPLVMTAPAAGQ
Ga0187782_103391242	3300017975	Tropical Peatland	TATVTHWLSKHNSAMLPAGTELDMELSRPLVMTAAAAGQ
Ga0187884_100420781	3300018009	Peatland	THWLGKHRSAMLPAGTELVMELSRPMTMTSASTGQ
Ga0187874_103953081	3300018019	Peatland	VTVGHWMGKKNSATLPAGTELVMELSRPLEMTAATGGQ
Ga0187863_100964961	3300018034	Peatland	IGATVTVAHWLSKHNSAFLPAGTELVMELDRPLEMSPATGGQ
Ga0187855_101340093	3300018038	Peatland	ATVTVTHWLGKHRSAMLPAGTELVMELNRPMTMTMTVASGGQ
Ga0187871_100871912	3300018042	Peatland	TVTHWLGKHRSAMLPAGTELVMELSRPMTMTVAVASSGQ
Ga0187871_106390901	3300018042	Peatland	GAVGATVTVAHWLGKHRSAMLPAGTELVMELNRPMTMSVAVASSGQ
Ga0187890_103175961	3300018044	Peatland	GAVGAAVTVAHWLGKHRSAMLPAGTELVMELNRPMTMTTTAAGGQ
Ga0187765_108125562	3300018060	Tropical Peatland	VAHWLGKKNSAMLPAGTELVMELSRPLEMAPATTGGQ
Ga0187772_101890561	3300018085	Tropical Peatland	ATITVSHWLGKHRSAMLPAGTELVMELSRPMTMTTAVAGSGQ
Ga0187770_115776722	3300018090	Tropical Peatland	TVAVAHWLGKKNSATLPAGTELVMELSRPMDMSAATGGQ
Ga0194136_12447251	3300018412	Watersheds	ITHWLAKHRSAMLPAGTELVMELNRPMVMSPNSGQ
Ga0066669_115474991	3300018482	Grasslands Soil	GAGATVTHWLSKHRSTTLPAGTQLVMELNRPMVMSPNSGQ
Ga0182031_10684141	3300019787	Bog	MIGATVTVTHWLGKHRSATLPAGTELVMELNRPMTMSTASSGQ
Ga0210403_113812612	3300020580	Soil	ATVTHWLSKKNSAVLPAGTELVMELSRPLEMTAAATGGQ
Ga0210399_100458573	3300020581	Soil	ATVTVAHWLGKHRSAMLPAGTELVMELNRPMTMTVASGGQ
Ga0210399_102409411	3300020581	Soil	GVGATLTVAHWLGKRRSAALPSGTELMIELSRPLAMTPETAGQ
Ga0210396_108917693	3300021180	Soil	IGATIGATATVARWLGKRNSAELPAGTQLVMELSRPLEMTAATGGQ
Ga0210394_111127102	3300021420	Soil	THWLVKKNSATLPAGTLLTMELSRPLAMTPAPSAPGN
Ga0210398_110185732	3300021477	Soil	IGATVTITHWLGKHRSAMLPAGTELVMELSRPMTMTTVVASTGQ
Ga0210402_119182171	3300021478	Soil	GASATVTHWLIKKNSATLPAGTLLTMELSRPLAMTPAPSAPGN
Ga0210402_119632021	3300021478	Soil	VIGGAIGATATVVHWLGKKKSATLLAGTELVMELNRPLEMAPAAAGQ
Ga0210410_106218983	3300021479	Soil	TATVAHWLGKKNSTALPAGTTLVMALSRPLEMTADTGGQ
Ga0126371_100316854	3300021560	Tropical Forest Soil	TTAHWLSKRNSAALPSGTELVMELSRSMTIGAAAPESGQ
Ga0224541_10155751	3300022521	Soil	GGAIGATVTVTHWLGKHRSAMLPAGTELVMELNRPMTMTTTVASAGQ
Ga0208188_11328381	3300025507	Peatland	GAVGATVTVTHWLGKHRSAMLPAGTELVMELSRPMTMTAASSGQ
Ga0208080_10921212	3300025553	Arctic Peat Soil	VGATATVTHWLAKHRSAMLPAGTELVMELNRPMTMTSASTGQ
Ga0207646_109198691	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ATATVAHWLGKHRSAVLPAGTELVMELNRPVTMTMTSASGGQ
Ga0208141_10203421	3300025988	Rice Paddy Soil	VLIGGAIGATATITHWLARHRSAMIPAGTELVMELNRPVTLNAAASGGK
Ga0207702_102090952	3300026078	Corn Rhizosphere	GATATITHWLTKRRTAMLPPGTELVMELNRPMTLSSASSGQ
Ga0207702_124326751	3300026078	Corn Rhizosphere	TVAHWLGKKRSAVLPSGTELMMELSRPLAMTAETGGQ
Ga0209008_11154842	3300027545	Forest Soil	VTVSHWLGKHRSASLPAGTELVMELNRPMVMTSAVAGQ
Ga0209530_10255251	3300027692	Forest Soil	GAVGATVTVAHWLGKHRSAMLPAGTEMVMELNRPMMMSVAAPSNGQ
Ga0209274_101124362	3300027853	Soil	ITVSHWLGKHRSAALPAGTELVMELSRPMTMTAASSGQ
Ga0209274_105007211	3300027853	Soil	GLVGATVTVTHWLSKHRSAMLPAGTELVMELNRPMTMTTAIASSGQ
Ga0209283_100831121	3300027875	Vadose Zone Soil	TVAHWLSKHRSAMLPAGTELVMELSRPMALTAASSGQ
Ga0209698_100833223	3300027911	Watersheds	VAHWLGKHRSAMLPAGTELVMELSRPMTMTWANSGQ
Ga0209526_103367241	3300028047	Forest Soil	SHWLGKHRSATLPAGTELTLELDRPLMMSSPSVGQ
Ga0302151_100440531	3300028562	Bog	THWLGKHRSATLPAGTELVMELNRPMTMSTASSGQ
Ga0302152_101253142	3300028572	Bog	VTVAHWLGKHRSGMLPAGTELVMELNRPMTMTMTTASAVGGQ
Ga0302170_101144322	3300028650	Fen	VTVTHWLAKHRSATLPAGTELVMELSRPMVMNQVAGQ
Ga0302156_101365293	3300028748	Bog	GAVGATVTVAHWLGKHRSAMLPAGTELVMELNRPMTMTTTAAGGQ
Ga0222749_104876431	3300029636	Soil	IGATVTVAHWLGKKRGAMLPSGTELMMELSRPLAMTAEASGQ
Ga0311357_103713622	3300030524	Palsa	IGGLVGATVTVTHWLSKHRSAMLPAGTELVMELNRPMTMTTAIASSGQ
Ga0311357_104817672	3300030524	Palsa	GATITVTHWLGKHRSAMLPAGTELTMELNRPMTMTTTVASTGQ
Ga0310686_1192539501	3300031708	Soil	ATVTVAHWLGKHRSAMLPAGTELVMELNRPMTMTTVVASSGQ
Ga0307474_101923081	3300031718	Hardwood Forest Soil	GGAVGATATVAHWMGKKNSAALPAGTELVMELSRPLAMTAATGGQ
Ga0306921_111852482	3300031912	Soil	TVAHWMSKKKYASLPAGTELTMELSRPLEMKQASAGQ
Ga0310909_112663742	3300031947	Soil	GGAIGASATVAHWMSKKKYASLPAGTELVMELSRPMEMKEAPAGQ
Ga0306920_1022669052	3300032261	Soil	THWLAKHRSATLPAGTELTMELSRPMTLTAASGGQ
Ga0335081_101748354	3300032892	Soil	TAAIAYWLSKRNSAVLPAGTELVMEVERPLAMTPPTTGQ
Ga0335073_101219821	3300033134	Soil	GATATVSHWLGKHRSATLPAGTELVMELNRPMTMTSVAAGQ
Ga0335077_107059271	3300033158	Soil	AHWLGKKRSTELPAGTELDMELTRPLTMTAASAGQ
Ga0326726_114720102	3300033433	Peat Soil	IGGAVGATATVVHWLGRHKSAMLPAGTELVVELNRPMTLSAAGE
Ga0314867_047731_892_1002	3300033808	Peatland	AHWLGKKNSATLPAGTELVMELSHAMDLSAVTVGGQ

Hidden Markov Model


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